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ONTOLOGY REPORT - ANNOTATIONS


Term:pyridoxal phosphate biosynthetic process
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Accession:GO:0042823 term browser browse the term
Definition:The chemical reactions and pathways resulting in the formation of pyridoxal phosphate, pyridoxal phosphorylated at the hydroxymethyl group of C-5, the active form of vitamin B6.
Synonyms:exact_synonym: active vitamin B6 biosynthesis;   active vitamin B6 biosynthetic process;   pyridoxal phosphate anabolism;   pyridoxal phosphate biosynthesis;   pyridoxal phosphate formation;   pyridoxal phosphate synthesis
 xref: MetaCyc:PWY0-845


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pyridoxal phosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pdxk pyridoxal kinase ISO RGD PMID:2988502 RGD:2303018 NCBI chrNW_004936500:510,977...539,166 JBrowse link
G Pnpo pyridoxamine 5'-phosphate oxidase involved_in ISO (PMID:12824491) CAFA PMID:12824491 NCBI chrNW_004936490:13,374,925...13,382,037 JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 12164
    metabolic process 7639
      cellular metabolic process 7017
        cellular aromatic compound metabolic process 3794
          aromatic compound biosynthetic process 2706
            pyridoxal phosphate biosynthetic process 2
              'de novo' pyridoxal 5'-phosphate biosynthetic process 0
              pyridoxal 5'-phosphate salvage + 0
Path 2
Term Annotations click to browse term
  biological_process 12164
    metabolic process 7639
      small molecule metabolic process 1217
        vitamin metabolic process 62
          water-soluble vitamin metabolic process 28
            water-soluble vitamin biosynthetic process 5
              vitamin B6 biosynthetic process 2
                pyridoxal phosphate biosynthetic process 2
                  'de novo' pyridoxal 5'-phosphate biosynthetic process 0
                  pyridoxal 5'-phosphate salvage + 0
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