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ONTOLOGY REPORT - ANNOTATIONS


Term:pyridoxal phosphate biosynthetic process
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Accession:GO:0042823 term browser browse the term
Definition:The chemical reactions and pathways resulting in the formation of pyridoxal phosphate, pyridoxal phosphorylated at the hydroxymethyl group of C-5, the active form of vitamin B6.
Synonyms:exact_synonym: active vitamin B6 biosynthesis;   active vitamin B6 biosynthetic process;   pyridoxal phosphate anabolism;   pyridoxal phosphate biosynthesis;   pyridoxal phosphate formation;   pyridoxal phosphate synthesis
 xref: MetaCyc:PWY0-845


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pyridoxal phosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pdxk pyridoxal (pyridoxine, vitamin B6) kinase involved_in ISO RGD
MGI
PMID:2988502 GO_REF:0000096 MGI:4417868 RGD:2303018 NCBI chr10:78,436,747...78,464,948
Ensembl chr10:78,436,744...78,464,975
JBrowse link
G Pnpo pyridoxine 5'-phosphate oxidase involved_in ISO
IBA
(MGI:6201960|PMID:21873635) MGI
GO_Central
PMID:21873635 GO_REF:0000096 MGI:4834177 MGI:6201960 NCBI chr11:96,937,816...96,944,019
Ensembl chr11:96,937,825...96,943,986
JBrowse link
pyridoxal 5'-phosphate salvage term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pdxk pyridoxal (pyridoxine, vitamin B6) kinase involved_in ISO
IBA
(MGI:6201960|PMID:21873635) MGI
GO_Central
PMID:21873635 GO_REF:0000096 MGI:4834177 MGI:6201960 NCBI chr10:78,436,747...78,464,948
Ensembl chr10:78,436,744...78,464,975
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 28616
    metabolic process 11239
      cellular metabolic process 10124
        cellular aromatic compound metabolic process 5526
          aromatic compound biosynthetic process 3854
            pyridoxal phosphate biosynthetic process 2
              'de novo' pyridoxal 5'-phosphate biosynthetic process 0
              pyridoxal 5'-phosphate salvage + 1
Path 2
Term Annotations click to browse term
  biological_process 28616
    metabolic process 11239
      small molecule metabolic process 1750
        vitamin metabolic process 81
          water-soluble vitamin metabolic process 34
            water-soluble vitamin biosynthetic process 7
              vitamin B6 biosynthetic process 2
                pyridoxal phosphate biosynthetic process 2
                  'de novo' pyridoxal 5'-phosphate biosynthetic process 0
                  pyridoxal 5'-phosphate salvage + 1
paths to the root