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ONTOLOGY REPORT - ANNOTATIONS


Term:pyridoxal phosphate biosynthetic process
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Accession:GO:0042823 term browser browse the term
Definition:The chemical reactions and pathways resulting in the formation of pyridoxal phosphate, pyridoxal phosphorylated at the hydroxymethyl group of C-5, the active form of vitamin B6.
Synonyms:exact_synonym: active vitamin B6 biosynthesis;   active vitamin B6 biosynthetic process;   pyridoxal phosphate anabolism;   pyridoxal phosphate biosynthesis;   pyridoxal phosphate formation;   pyridoxal phosphate synthesis
 xref: MetaCyc:PWY0-845


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pyridoxal phosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PNPO pyridoxamine 5'-phosphate oxidase involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 9:24,252,895...24,258,523
Ensembl chr 9:24,252,964...24,258,106
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pyridoxal 5'-phosphate salvage term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PDXK pyridoxal kinase involved_in ISO (PMID:31187503)
(PMID:10987144), (PMID:17766369), (PMID:9099727)
UniProt PMID:9099727 PMID:10987144 PMID:17766369 PMID:31187503 NCBI chr31:37,686,002...37,710,059
Ensembl chr31:37,685,492...37,707,767
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Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 13872
    metabolic process 8970
      cellular metabolic process 8181
        cellular aromatic compound metabolic process 4401
          aromatic compound biosynthetic process 3074
            pyridoxal phosphate biosynthetic process 2
              'de novo' pyridoxal 5'-phosphate biosynthetic process 0
              pyridoxal 5'-phosphate salvage + 1
Path 2
Term Annotations click to browse term
  biological_process 13872
    metabolic process 8970
      small molecule metabolic process 1413
        vitamin metabolic process 65
          water-soluble vitamin metabolic process 29
            water-soluble vitamin biosynthetic process 5
              vitamin B6 biosynthetic process 2
                pyridoxal phosphate biosynthetic process 2
                  'de novo' pyridoxal 5'-phosphate biosynthetic process 0
                  pyridoxal 5'-phosphate salvage + 1
paths to the root