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ONTOLOGY REPORT - ANNOTATIONS

Term:pyridoxal phosphate biosynthetic process
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Accession:GO:0042823 term browser browse the term
Definition:The chemical reactions and pathways resulting in the formation of pyridoxal phosphate, pyridoxal phosphorylated at the hydroxymethyl group of C-5, the active form of vitamin B6.
Synonyms:exact_synonym: active vitamin B6 biosynthesis;   active vitamin B6 biosynthetic process;   pyridoxal phosphate anabolism;   pyridoxal phosphate biosynthesis;   pyridoxal phosphate formation;   pyridoxal phosphate synthesis
 xref: MetaCyc:PWY0-845

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pyridoxal phosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pdxk pyridoxal kinase ISO RGD PMID:2988502 RGD:2303018 NCBI chrNW_004955407:41,482,216...41,494,174
Ensembl chrNW_004955407:41,482,216...41,494,177 		JBrowse link
G Pnpo pyridoxamine 5'-phosphate oxidase involved_in ISO (PMID:12824491) CAFA PMID:12824491 NCBI chrNW_004955451:13,184,861...13,190,933
Ensembl chrNW_004955451:13,183,826...13,191,707 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 12572
    cellular process 12010
      metabolic process 7974
        aldehyde metabolic process 52
          aldehyde biosynthetic process 15
            pyridoxal phosphate biosynthetic process 2
              'de novo' pyridoxal 5'-phosphate biosynthetic process 0
              pyridoxal 5'-phosphate salvage + 0
Path 2
Term Annotations click to browse term
  biological_process 12572
    cellular process 12010
      metabolic process 7974
        small molecule metabolic process 1327
          vitamin metabolic process 81
            water-soluble vitamin metabolic process 43
              vitamin B6 metabolic process 4
                pyridoxal phosphate metabolic process 4
                  pyridoxal phosphate biosynthetic process 2
                    'de novo' pyridoxal 5'-phosphate biosynthetic process 0
                    pyridoxal 5'-phosphate salvage + 0
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