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ONTOLOGY REPORT - ANNOTATIONS


Term:pyridoxal phosphate biosynthetic process
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Accession:GO:0042823 term browser browse the term
Definition:The chemical reactions and pathways resulting in the formation of pyridoxal phosphate, pyridoxal phosphorylated at the hydroxymethyl group of C-5, the active form of vitamin B6.
Synonyms:exact_synonym: active vitamin B6 biosynthesis;   active vitamin B6 biosynthetic process;   pyridoxal phosphate anabolism;   pyridoxal phosphate biosynthesis;   pyridoxal phosphate formation;   pyridoxal phosphate synthesis
 xref: MetaCyc:PWY0-845


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pyridoxal phosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PDXK pyridoxal kinase ISO RGD PMID:2988502 RGD:2303018 NCBI chr21:29,977,286...30,021,266
Ensembl chr21:43,273,237...43,313,637
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G PNPO pyridoxamine 5'-phosphate oxidase involved_in ISO (PMID:12824491) CAFA PMID:12824491 NCBI chr17:9,589,253...9,596,973
Ensembl chr17:9,773,052...9,778,922
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Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 12654
    metabolic process 7926
      cellular metabolic process 7262
        cellular aromatic compound metabolic process 3905
          aromatic compound biosynthetic process 2776
            pyridoxal phosphate biosynthetic process 2
              'de novo' pyridoxal 5'-phosphate biosynthetic process 0
              pyridoxal 5'-phosphate salvage + 0
Path 2
Term Annotations click to browse term
  biological_process 12654
    metabolic process 7926
      small molecule metabolic process 1286
        vitamin metabolic process 61
          water-soluble vitamin metabolic process 26
            water-soluble vitamin biosynthetic process 5
              vitamin B6 biosynthetic process 2
                pyridoxal phosphate biosynthetic process 2
                  'de novo' pyridoxal 5'-phosphate biosynthetic process 0
                  pyridoxal 5'-phosphate salvage + 0
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