Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)

ONTOLOGY REPORT - ANNOTATIONS

Term:very long-chain fatty acid catabolic process
go back to main search page
Accession:GO:0042760 term browser browse the term
Definition:The chemical reactions and pathways resulting in the breakdown of a very long-chain fatty acid. A very long-chain fatty acid has an aliphatic tail containing more than 22 carbons.
Comment:While there is not universal consensus on the lengths of short-, medium-, long- and very-long-chain fatty acids, the GO uses the definitions in ChEBI (see CHEBI:26666, CHEBI:59554, CHEBI:15904 and CHEBI:27283).
Synonyms:exact_synonym: very-long-chain fatty acid breakdown;   very-long-chain fatty acid catabolism;   very-long-chain fatty acid degradation

GViewer not supported for the selected species.

show annotations for term's descendants           Sort by:
very long-chain fatty acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcd1 ATP binding cassette subfamily D member 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936809:615,133...634,618
Ensembl chrNW_004936809:615,139...635,990 		JBrowse link
G Abcd2 ATP binding cassette subfamily D member 2 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936607:1,292,964...1,345,671
Ensembl chrNW_004936607:1,292,888...1,343,334 		JBrowse link
G Abcd3 ATP binding cassette subfamily D member 3 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936537:4,659,685...4,745,992
Ensembl chrNW_004936537:4,659,484...4,746,616 		JBrowse link
G Abcd4 ATP binding cassette subfamily D member 4 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936488:3,526,875...3,538,851
Ensembl chrNW_004936488:3,523,344...3,538,858 		JBrowse link
G Slc27a2 solute carrier family 27 member 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12719378) Ensembl
MGI
TreeGrafter		 PMID:12719378 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936471:12,259,779...12,298,760
Ensembl chrNW_004936471:12,259,734...12,298,760 		JBrowse link
G Slc27a4 solute carrier family 27 member 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17522045) Ensembl
MGI
TreeGrafter		 PMID:17522045 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936487:15,877,075...15,905,752
Ensembl chrNW_004936487:15,876,606...15,906,003
Ensembl chrNW_004936487:15,876,606...15,906,003 		JBrowse link
very long-chain fatty acid beta-oxidation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acox1 acyl-CoA oxidase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936594:1,115,607...1,140,085
Ensembl chrNW_004936594:1,112,565...1,140,228 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 16121
    metabolic process 10242
      cellular metabolic process 8541
        cellular lipid metabolic process 937
          fatty acid metabolic process 379
            fatty acid catabolic process 100
              very long-chain fatty acid catabolic process 7
                very long-chain fatty acid beta-oxidation 1
Path 2
Term Annotations click to browse term
  biological_process 16121
    metabolic process 10242
      cellular metabolic process 8541
        organic acid metabolic process 890
          oxoacid metabolic process 873
            carboxylic acid metabolic process 862
              monocarboxylic acid metabolic process 595
                fatty acid metabolic process 379
                  very long-chain fatty acid metabolic process 29
                    very long-chain fatty acid catabolic process 7
                      very long-chain fatty acid beta-oxidation 1
paths to the root