Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)

ONTOLOGY REPORT - ANNOTATIONS

Term:long-chain fatty acid catabolic process
go back to main search page
Accession:GO:0042758 term browser browse the term
Definition:The chemical reactions and pathways resulting in the breakdown of a long-chain fatty acid. A long-chain fatty acid has an aliphatic tail containing 13 to 22 carbons.
Comment:While there is not universal consensus on the lengths of short-, medium-, long- and very-long-chain fatty acids, the GO uses the definitions in ChEBI (see CHEBI:26666, CHEBI:59554, CHEBI:15904 and CHEBI:27283).
Synonyms:exact_synonym: long-chain fatty acid breakdown;   long-chain fatty acid catabolism;   long-chain fatty acid degradation


show annotations for term's descendants           Sort by:
long-chain fatty acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCD1 ATP binding cassette subfamily D member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:121,545,690...121,564,117
Ensembl chr  X:121,545,586...121,563,186 		JBrowse link
G ACADL acyl-CoA dehydrogenase long chain involved_in ISO
IEA		 RGD
InterPro		 PMID:3968063 GO_REF:0000002 RGD:2317678 NCBI chr37:18,028,244...18,073,975
Ensembl chr37:18,017,087...18,073,862 		JBrowse link
G ADTRP androgen dependent TFPI regulating protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr35:11,300,186...11,362,893
Ensembl chr35:11,300,887...11,362,101 		JBrowse link
G AIG1 androgen induced 1 involved_in ISO (PMID:27018888) UniProt PMID:27018888 NCBI chr 1:34,643,994...34,884,445
Ensembl chr 1:34,643,764...34,884,119 		JBrowse link
G LIPE lipase E, hormone sensitive type acts_upstream_of_or_within ISO (PMID:16804080) MGI PMID:16804080 NCBI chr 1:111,987,862...112,006,492
Ensembl chr 1:111,988,029...112,006,461 		JBrowse link
leukotriene B4 catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC484867 cytochrome P450 4F3 involved_in ISO (PMID:11461919), (PMID:9675028) UniProt PMID:9675028 PMID:11461919 NCBI chr20:46,611,799...46,664,131
Ensembl chr20:46,458,620...46,705,789 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 17084
    cellular process 16608
      metabolic process 10866
        catabolic process 2436
          cellular catabolic process 985
            cellular lipid catabolic process 212
              fatty acid catabolic process 96
                long-chain fatty acid catabolic process 6
                  leukotriene A4 catabolic process 0
                  leukotriene B4 catabolic process 1
                  palmitic acid catabolic process + 0
Path 2
Term Annotations click to browse term
  biological_process 17084
    cellular process 16608
      metabolic process 10866
        small molecule metabolic process 1708
          organic acid metabolic process 905
            oxoacid metabolic process 898
              carboxylic acid metabolic process 883
                monocarboxylic acid metabolic process 602
                  fatty acid metabolic process 361
                    long-chain fatty acid metabolic process 74
                      long-chain fatty acid catabolic process 6
                        leukotriene A4 catabolic process 0
                        leukotriene B4 catabolic process 1
                        palmitic acid catabolic process + 0
paths to the root