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ONTOLOGY REPORT - ANNOTATIONS


Term:positive regulation of circadian rhythm
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Accession:GO:0042753 term browser browse the term
Definition:Any process that activates or increases the frequency, rate or extent of a circadian rhythm behavior.
Synonyms:exact_synonym: up regulation of circadian rhythm;   upregulation of circadian rhythm
 narrow_synonym: activation of circadian rhythm;   stimulation of circadian rhythm



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positive regulation of circadian rhythm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMAL1 basic helix-loop-helix ARNT like 1 involved_in ISS
IDA
(PMID:23229515) UniProt
ComplexPortal
UniProt
ComplexPortal
PMID:23229515 GO_REF:0000024 NCBI chr11:13,276,652...13,387,266
Ensembl chr11:13,276,652...13,387,266
JBrowse link
G BMAL2 basic helix-loop-helix ARNT like 2 involved_in ISS
IEA
IDA
(PMID:12738229) UniProt
UniProt
Ensembl
ComplexPortal
ComplexPortal
PMID:12738229 GO_REF:0000024 GO_REF:0000107 NCBI chr12:27,332,836...27,425,286
Ensembl chr12:27,332,836...27,425,289
JBrowse link
G BTRC beta-transducin repeat containing E3 ubiquitin protein ligase involved_in ISS
IEA
UniProt
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr10:101,354,048...101,557,313
Ensembl chr10:101,354,033...101,557,321
JBrowse link
G CLOCK clock circadian regulator involved_in IDA
IEA
(PMID:12738229), (PMID:23229515) ComplexPortal
ComplexPortal
Ensembl
PMID:12738229 PMID:23229515 GO_REF:0000107 NCBI chr 4:55,427,903...55,546,909
Ensembl chr 4:55,427,903...55,546,909
JBrowse link
G FBXW11 F-box and WD repeat domain containing 11 involved_in IEA
ISS
Ensembl
Ensembl
UniProt
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr 5:171,861,549...172,006,638
Ensembl chr 5:171,861,549...172,006,873
JBrowse link
G KAT5 lysine acetyltransferase 5 involved_in ISS
IEA
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr11:65,712,018...65,719,604
Ensembl chr11:65,711,996...65,719,604
JBrowse link
G MTNR1B melatonin receptor 1B involved_in ISO
IEA
RGD
Ensembl
PMID:12643943 GO_REF:0000107 RGD:9588678 NCBI chr11:92,969,651...92,984,960
Ensembl chr11:92,969,651...92,985,066
JBrowse link
G NKX2-1 NK2 homeobox 1 involved_in ISS
IEA
UniProt
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr14:36,516,397...36,520,232
Ensembl chr14:36,516,392...36,521,149
JBrowse link
G NR1D1 nuclear receptor subfamily 1 group D member 1 ISO RGD PMID:18946026 RGD:10448985 NCBI chr17:40,092,793...40,100,589
Ensembl chr17:40,092,793...40,100,589
JBrowse link
G PRKG1 protein kinase cGMP-dependent 1 ISO RGD PMID:12930792 RGD:7777105 NCBI chr10:50,990,888...52,298,350
Ensembl chr10:50,990,888...52,298,423
JBrowse link
G RORA RAR related orphan receptor A involved_in ISS
IEA
UniProt
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr15:60,488,284...61,229,302
Ensembl chr15:60,488,284...61,229,302
JBrowse link
G RORC RAR related orphan receptor C involved_in ISS UniProt
UniProt
GO_REF:0000024 NCBI chr 1:151,806,071...151,831,802
Ensembl chr 1:151,806,071...151,831,845
JBrowse link
G THRAP3 thyroid hormone receptor associated protein 3 involved_in IMP (PMID:24043798) UniProt
UniProt
PMID:24043798 NCBI chr 1:36,207,637...36,305,357
Ensembl chr 1:36,224,432...36,305,357
JBrowse link
G TIMELESS timeless circadian regulator ISO RGD PMID:14564007 RGD:734503 NCBI chr12:56,416,363...56,449,426
Ensembl chr12:56,416,363...56,449,426
JBrowse link
positive regulation of circadian sleep/wake cycle, non-REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALB albumin ISO RGD PMID:9748091 RGD:1625449 NCBI chr 4:73,404,287...73,421,482
Ensembl chr 4:73,397,114...73,421,482
JBrowse link
G CASP1 caspase 1 ISO RGD PMID:16455762 RGD:2315921 NCBI chr11:105,025,443...105,036,686
Ensembl chr11:105,025,397...105,035,250
JBrowse link
G GHRH growth hormone releasing hormone ISO RGD PMID:19889861 PMID:20237285 RGD:10401262 RGD:2325188 NCBI chr20:37,251,086...37,261,814
Ensembl chr20:37,251,086...37,261,819
JBrowse link
G GHRHR growth hormone releasing hormone receptor involved_in IEA
ISO
Ensembl
RGD
Ensembl
PMID:20237285 GO_REF:0000107 RGD:10401262 NCBI chr 7:30,963,953...30,979,528
Ensembl chr 7:30,938,669...30,993,254
JBrowse link
G GHRL ghrelin and obestatin prepropeptide involved_in IDA (PMID:18329818) BHF-UCL
BHF-UCL
PMID:18329818 NCBI chr 3:10,285,666...10,292,947
Ensembl chr 3:10,285,666...10,292,947
JBrowse link
G MTNR1B melatonin receptor 1B involved_in IEA
ISO
Ensembl
RGD
Ensembl
PMID:19429170 PMID:22171046 GO_REF:0000107 RGD:9588660 RGD:9588665 NCBI chr11:92,969,651...92,984,960
Ensembl chr11:92,969,651...92,985,066
JBrowse link
G NPY2R neuropeptide Y receptor Y2 ISO RGD PMID:16378653 RGD:1642507 NCBI chr 4:155,173,723...155,217,076
Ensembl chr 4:155,208,636...155,217,078
JBrowse link
G PTGER3 prostaglandin E receptor 3 ISO RGD PMID:10923657 RGD:10043386 NCBI chr 1:70,852,358...71,047,816
Ensembl chr 1:70,852,353...71,047,816
JBrowse link
G PTGER4 prostaglandin E receptor 4 ISO RGD PMID:10923657 RGD:10043386 NCBI chr 5:40,679,915...40,746,800
Ensembl chr 5:40,679,915...40,693,735
JBrowse link
positive regulation of circadian sleep/wake cycle, REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GHRH growth hormone releasing hormone NOT|involved_in IMP
NAS
(PMID:15538933)
(PMID:18329818)
BHF-UCL
BHF-UCL
PMID:15538933 PMID:18329818 NCBI chr20:37,251,086...37,261,814
Ensembl chr20:37,251,086...37,261,819
JBrowse link
G PMCH pro-melanin concentrating hormone ISO RGD PMID:12964948 RGD:1642489 NCBI chr12:102,196,459...102,197,833
Ensembl chr12:102,196,459...102,197,833
JBrowse link
G UTS2 urotensin 2 involved_in ISO
IEA
RGD
Ensembl
PMID:15944374 GO_REF:0000107 RGD:2306844 NCBI chr 1:7,847,612...7,913,249
Ensembl chr 1:7,843,083...7,853,512
JBrowse link
G UTS2R urotensin 2 receptor ISO RGD PMID:15944374 RGD:2306844 NCBI chr17:82,371,765...82,377,458
Ensembl chr17:82,371,765...82,377,458
JBrowse link
positive regulation of circadian sleep/wake cycle, sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADORA2A adenosine A2a receptor involved_in IEA
ISO
in the sleep-promoting area of the lateral preoptic area of the brain Ensembl
Ensembl
RGD
PMID:16109808 GO_REF:0000107 RGD:1625234 NCBI chr22:24,423,597...24,442,357
Ensembl chr22:24,417,879...24,442,357
JBrowse link
G OPN4 opsin 4 acts_upstream_of_or_within ISO (MGI:5925970|PMID:26320947) MGI PMID:26320947 MGI:5925970 NCBI chr10:86,654,547...86,666,460
Ensembl chr10:86,654,518...86,666,460
JBrowse link
positive regulation of circadian sleep/wake cycle, wakefulness term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CRH corticotropin releasing hormone involved_in NAS (PMID:18329818) BHF-UCL
BHF-UCL
PMID:18329818 NCBI chr 8:66,176,376...66,178,464
Ensembl chr 8:66,176,376...66,178,464
JBrowse link
G NLGN1 neuroligin 1 involved_in ISS UniProt
UniProt
GO_REF:0000024 NCBI chr 3:173,395,952...174,294,372
Ensembl chr 3:173,396,284...174,294,372
JBrowse link
G NPS neuropeptide S involved_in IEA
ISO
Ensembl
Ensembl
RGD
PMID:22300983 GO_REF:0000107 RGD:9831203 NCBI chr10:127,549,309...127,553,540
Ensembl chr10:127,549,309...127,553,540
JBrowse link
G UTS2 urotensin 2 involved_in ISO
IEA
RGD
Ensembl
PMID:15944374 GO_REF:0000107 RGD:2306844 NCBI chr 1:7,847,612...7,913,249
Ensembl chr 1:7,843,083...7,853,512
JBrowse link
G UTS2R urotensin 2 receptor ISO RGD PMID:15944374 RGD:2306844 NCBI chr17:82,371,765...82,377,458
Ensembl chr17:82,371,765...82,377,458
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19751
    positive regulation of biological process 7229
      positive regulation of circadian rhythm 30
        positive regulation of circadian sleep/wake cycle, sleep + 14
        positive regulation of circadian sleep/wake cycle, wakefulness 5
        positive regulation of locomotor rhythm 0
Path 2
Term Annotations click to browse term
  biological_process 19751
    biological regulation 13900
      regulation of biological process 13156
        regulation of circadian rhythm 145
          positive regulation of circadian rhythm 30
            positive regulation of circadian sleep/wake cycle, sleep + 14
            positive regulation of circadian sleep/wake cycle, wakefulness 5
            positive regulation of locomotor rhythm 0
paths to the root