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ONTOLOGY REPORT - ANNOTATIONS


Term:positive regulation of circadian rhythm
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Accession:GO:0042753 term browser browse the term
Definition:Any process that activates or increases the frequency, rate or extent of a circadian rhythm behavior.
Synonyms:exact_synonym: up regulation of circadian rhythm;   upregulation of circadian rhythm
 narrow_synonym: activation of circadian rhythm;   stimulation of circadian rhythm



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positive regulation of circadian rhythm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARNTL aryl hydrocarbon receptor nuclear translocator like involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:36,254,235...36,323,915
Ensembl chr21:36,290,070...36,323,622
JBrowse link
G ARNTL2 aryl hydrocarbon receptor nuclear translocator like 2 involved_in ISO (MGI:4410413|PMID:19605937)
(PMID:12738229)
UniProt
ComplexPortal
PMID:12738229 PMID:19605937 MGI:4410413 NCBI chr27:20,304,404...20,420,086
Ensembl chr27:20,306,705...20,420,736
JBrowse link
G BTRC beta-transducin repeat containing E3 ubiquitin protein ligase involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr28:13,988,408...14,173,223
Ensembl chr28:13,988,432...14,169,581
JBrowse link
G CLOCK clock circadian regulator involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr13:47,684,409...47,825,733
Ensembl chr13:47,691,709...47,758,784
JBrowse link
G FBXW11 F-box and WD repeat domain containing 11 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:40,238,695...40,363,445
Ensembl chr 4:40,238,737...40,361,125
JBrowse link
G KAT5 lysine acetyltransferase 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:51,499,615...51,507,434
Ensembl chr18:51,499,938...51,576,699
JBrowse link
G LOC119866906 RAR related orphan receptor A involved_in IEA Ensembl GO_REF:0000107
G MTNR1B melatonin receptor 1B ISO RGD PMID:12643943 RGD:9588678 NCBI chr21:7,639,532...7,643,534
Ensembl chr21:7,640,317...7,641,498
JBrowse link
G NKX2-1 NK2 homeobox 1 involved_in IEA Ensembl
Ensembl
GO_REF:0000107
G NR1D1 nuclear receptor subfamily 1 group D member 1 ISO RGD PMID:18946026 RGD:10448985 NCBI chr 9:22,461,556...22,469,243
Ensembl chr 9:22,461,705...22,469,053
JBrowse link
G PRKG1 protein kinase cGMP-dependent 1 ISO RGD PMID:12930792 RGD:7777105 NCBI chr26:35,732,974...36,932,744
Ensembl chr26:35,737,242...36,932,729
JBrowse link
G RORA RAR related orphan receptor A involved_in IEA Ensembl GO_REF:0000107 NCBI chr30:25,315,974...26,026,708
Ensembl chr30:25,325,275...26,026,623
JBrowse link
G RORC RAR related orphan receptor C involved_in ISO (MGI:5504349|PMID:22753030) UniProt PMID:22753030 MGI:5504349 NCBI chr17:60,821,498...60,842,485
Ensembl chr17:60,821,981...60,842,453
JBrowse link
G THRAP3 thyroid hormone receptor associated protein 3 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr15:5,955,469...6,022,442
Ensembl chr15:5,956,316...6,021,875
JBrowse link
G TIMELESS timeless circadian regulator ISO RGD PMID:14564007 RGD:734503 NCBI chr10:671,829...701,152
Ensembl chr10:671,269...687,016
JBrowse link
positive regulation of circadian sleep/wake cycle, non-REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALB albumin ISO RGD PMID:9748091 RGD:1625449 NCBI chr13:62,133,747...62,169,349
Ensembl chr13:62,053,814...62,294,709
JBrowse link
G GHRH growth hormone releasing hormone ISO RGD PMID:19889861 PMID:20237285 RGD:10401262 RGD:2325188 NCBI chr24:25,893,224...25,902,095
Ensembl chr24:25,893,225...25,897,712
JBrowse link
G GHRHR growth hormone releasing hormone receptor ISO RGD PMID:20237285 RGD:10401262 NCBI chr14:43,626,862...43,638,737
Ensembl chr14:43,626,845...43,638,753
JBrowse link
G GHRL ghrelin and obestatin prepropeptide involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr20:8,092,921...8,097,512
Ensembl chr20:8,092,957...8,097,510
JBrowse link
G MTNR1B melatonin receptor 1B ISO RGD PMID:19429170 PMID:22171046 RGD:9588660 RGD:9588665 NCBI chr21:7,639,532...7,643,534
Ensembl chr21:7,640,317...7,641,498
JBrowse link
G NPY2R neuropeptide Y receptor Y2 ISO RGD PMID:16378653 RGD:1642507 NCBI chr15:52,790,136...52,797,785
Ensembl chr15:52,794,671...52,795,818
JBrowse link
G PTGER3 prostaglandin E receptor 3 ISO RGD PMID:10923657 RGD:10043386 NCBI chr 6:74,932,789...74,986,573 JBrowse link
G PTGER4 prostaglandin E receptor 4 ISO RGD PMID:10923657 RGD:10043386 NCBI chr 4:68,663,362...68,676,241
Ensembl chr 4:68,663,364...68,676,358
JBrowse link
positive regulation of circadian sleep/wake cycle, REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GHRH growth hormone releasing hormone NOT|involved_in ISO (PMID:15538933) BHF-UCL PMID:15538933 NCBI chr24:25,893,224...25,902,095
Ensembl chr24:25,893,225...25,897,712
JBrowse link
G PMCH pro-melanin concentrating hormone ISO RGD PMID:12964948 RGD:1642489 NCBI chr15:41,036,428...41,037,571
Ensembl chr15:41,036,428...41,037,553
JBrowse link
G UTS2 urotensin 2 ISO RGD PMID:15944374 RGD:2306844 NCBI chr 5:61,503,268...61,508,146 JBrowse link
G UTS2R urotensin 2 receptor ISO RGD PMID:15944374 RGD:2306844
positive regulation of circadian sleep/wake cycle, sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADORA2A adenosine A2a receptor ISO in the sleep-promoting area of the lateral preoptic area of the brain RGD PMID:16109808 RGD:1625234 NCBI chr26:28,141,076...28,150,600
Ensembl chr26:28,141,076...28,150,598
JBrowse link
G OPN4 opsin 4 acts_upstream_of_or_within ISO (MGI:5925970|PMID:26320947) MGI PMID:26320947 MGI:5925970 NCBI chr 4:34,350,058...34,365,410
Ensembl chr 4:34,355,128...34,365,215
JBrowse link
positive regulation of circadian sleep/wake cycle, wakefulness term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NLGN1 neuroligin 1 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr34:37,397,772...38,203,634
Ensembl chr34:37,572,629...38,203,177
JBrowse link
G NPS neuropeptide S ISO RGD PMID:22300983 RGD:9831203 NCBI chr28:36,488,430...36,492,524
Ensembl chr28:36,488,500...36,492,090
JBrowse link
G UTS2 urotensin 2 ISO RGD PMID:15944374 RGD:2306844 NCBI chr 5:61,503,268...61,508,146 JBrowse link
G UTS2R urotensin 2 receptor ISO RGD PMID:15944374 RGD:2306844

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 17343
    positive regulation of biological process 6561
      positive regulation of circadian rhythm 29
        positive regulation of circadian sleep/wake cycle, sleep + 13
        positive regulation of circadian sleep/wake cycle, wakefulness 4
        positive regulation of locomotor rhythm 0
Path 2
Term Annotations click to browse term
  biological_process 17343
    biological regulation 12485
      regulation of biological process 11808
        regulation of circadian rhythm 135
          positive regulation of circadian rhythm 29
            positive regulation of circadian sleep/wake cycle, sleep + 13
            positive regulation of circadian sleep/wake cycle, wakefulness 4
            positive regulation of locomotor rhythm 0
paths to the root