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ONTOLOGY REPORT - ANNOTATIONS

Term:positive regulation of circadian rhythm
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Accession:GO:0042753 term browser browse the term
Definition:Any process that activates or increases the frequency, rate or extent of a circadian rhythm behavior.
Synonyms:exact_synonym: up regulation of circadian rhythm;   upregulation of circadian rhythm
 narrow_synonym: activation of circadian rhythm;   stimulation of circadian rhythm


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positive regulation of circadian rhythm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMAL1 basic helix-loop-helix ARNT like 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:13,436,580...13,547,135
Ensembl chr11:13,163,028...13,240,376 		JBrowse link
G BMAL2 basic helix-loop-helix ARNT like 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:58,885,410...58,977,832
Ensembl chr12:61,503,973...61,596,580 		JBrowse link
G BTRC beta-transducin repeat containing E3 ubiquitin protein ligase involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:97,958,527...98,159,550
Ensembl chr10:101,431,318...101,632,496 		JBrowse link
G CLOCK clock circadian regulator involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:68,391,310...68,509,813
Ensembl chr 4:75,018,898...75,066,726 		JBrowse link
G FBXW11 F-box and WD repeat domain containing 11 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:167,207,643...167,354,730
Ensembl chr 5:174,124,499...174,271,977 		JBrowse link
G KAT5 lysine acetyltransferase 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:61,071,118...61,078,667
Ensembl chr11:64,404,572...64,412,667 		JBrowse link
G MTNR1B melatonin receptor 1B ISO RGD PMID:12643943 RGD:9588678 NCBI chr11:87,996,805...88,009,865
Ensembl chr11:91,491,822...91,504,652 		JBrowse link
G NKX2-1 NK2 homeobox 1 involved_in ISO (MGI:5574291|PMID:22356123) UniProt PMID:22356123 MGI:5574291
G NR1D1 nuclear receptor subfamily 1 group D member 1 ISO RGD PMID:18946026 RGD:10448985 NCBI chr17:17,188,390...17,196,315
Ensembl chr17:17,409,669...17,417,600 		JBrowse link
G PRKG1 protein kinase cGMP-dependent 1 ISO RGD PMID:12930792 RGD:7777105 NCBI chr10:47,642,312...48,935,188
Ensembl chr10:49,779,211...51,064,882 		JBrowse link
G RORA RAR related orphan receptor A involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:39,461,553...40,200,118
Ensembl chr15:57,771,735...57,980,460 		JBrowse link
G RORC RAR related orphan receptor C involved_in ISO (MGI:5504349|PMID:22753030) UniProt PMID:22753030 MGI:5504349 NCBI chr 1:127,164,725...127,190,479
Ensembl chr 1:130,808,705...130,834,490 		JBrowse link
G THRAP3 thyroid hormone receptor associated protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:35,492,918...35,572,896
Ensembl chr 1:36,719,770...36,741,355 		JBrowse link
G TIMELESS timeless circadian regulator ISO RGD PMID:14564007 RGD:734503 NCBI chr12:32,465,529...32,497,581
Ensembl chr12:32,718,649...32,750,728 		JBrowse link
positive regulation of circadian sleep/wake cycle, non-REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALB albumin ISO RGD PMID:9748091 RGD:1625449 NCBI chr 4:50,773,244...50,790,474
Ensembl chr 4:56,605,322...56,622,418 		JBrowse link
G CASP1 caspase 1 ISO RGD PMID:16455762 RGD:2315921 NCBI chr11:99,965,964...99,975,640
Ensembl chr11:103,448,497...103,458,149
Ensembl chr11:103,448,497...103,458,149 		JBrowse link
G GHRH growth hormone releasing hormone ISO RGD PMID:19889861 PMID:20237285 RGD:10401262 RGD:2325188 NCBI chr20:33,573,001...33,583,699
Ensembl chr20:34,687,587...34,693,240 		JBrowse link
G GHRHR growth hormone releasing hormone receptor ISO RGD PMID:20237285 RGD:10401262 NCBI chr 7:31,582,134...31,592,914
Ensembl chr 7:31,696,914...31,712,200 		JBrowse link
G GHRL ghrelin and obestatin prepropeptide involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:10,221,829...10,229,229
Ensembl chr 3:10,573,537...10,580,723 		JBrowse link
G MTNR1B melatonin receptor 1B ISO RGD PMID:19429170 PMID:22171046 RGD:9588660 RGD:9588665 NCBI chr11:87,996,805...88,009,865
Ensembl chr11:91,491,822...91,504,652 		JBrowse link
G NPY2R neuropeptide Y receptor Y2 ISO RGD PMID:16378653 RGD:1642507 NCBI chr 4:147,542,551...147,586,397
Ensembl chr 4:159,401,080...159,402,231 		JBrowse link
G PTGER3 prostaglandin E receptor 3 ISO RGD PMID:10923657 RGD:10043386 NCBI chr 1:70,076,610...70,271,475
Ensembl chr 1:72,059,441...72,254,063 		JBrowse link
G PTGER4 prostaglandin E receptor 4 ISO RGD PMID:10923657 RGD:10043386 NCBI chr 5:69,686,906...69,700,739
Ensembl chr 5:74,731,470...74,745,148 		JBrowse link
positive regulation of circadian sleep/wake cycle, REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GHRH growth hormone releasing hormone NOT|involved_in ISO (PMID:15538933) BHF-UCL PMID:15538933 NCBI chr20:33,573,001...33,583,699
Ensembl chr20:34,687,587...34,693,240 		JBrowse link
G PMCH pro-melanin concentrating hormone ISO RGD PMID:12964948 RGD:1642489 NCBI chr12:99,783,925...99,785,292
Ensembl chr12:103,181,497...103,182,616 		JBrowse link
G UTS2 urotensin 2 ISO RGD PMID:15944374 RGD:2306844 NCBI chr 1:6,609,104...6,616,966
Ensembl chr 1:7,854,687...7,864,688 		JBrowse link
G UTS2R urotensin 2 receptor ISO RGD PMID:15944374 RGD:2306844 NCBI chr17:76,783,432...76,788,639
Ensembl chr17:82,592,312...82,593,702 		JBrowse link
positive regulation of circadian sleep/wake cycle, sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADORA2A adenosine A2a receptor ISO in the sleep-promoting area of the lateral preoptic area of the brain RGD PMID:16109808 RGD:1625234 NCBI chr22:5,233,876...5,248,622
Ensembl chr22:22,104,253...22,114,189 		JBrowse link
positive regulation of circadian sleep/wake cycle, wakefulness term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NLGN1 neuroligin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:170,416,885...171,333,094
Ensembl chr 3:178,810,253...179,503,756 		JBrowse link
G NPS neuropeptide S ISO RGD PMID:22300983 RGD:9831203 NCBI chr10:124,135,616...124,139,845
Ensembl chr10:128,384,897...128,388,217 		JBrowse link
G UTS2 urotensin 2 ISO RGD PMID:15944374 RGD:2306844 NCBI chr 1:6,609,104...6,616,966
Ensembl chr 1:7,854,687...7,864,688 		JBrowse link
G UTS2R urotensin 2 receptor ISO RGD PMID:15944374 RGD:2306844 NCBI chr17:76,783,432...76,788,639
Ensembl chr17:82,592,312...82,593,702 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 16313
    positive regulation of biological process 6279
      positive regulation of circadian rhythm 28
        positive regulation of circadian sleep/wake cycle, sleep + 13
        positive regulation of circadian sleep/wake cycle, wakefulness 4
        positive regulation of locomotor rhythm 0
Path 2
Term Annotations click to browse term
  biological_process 16313
    biological regulation 11327
      regulation of biological process 10982
        regulation of circadian rhythm 127
          positive regulation of circadian rhythm 28
            positive regulation of circadian sleep/wake cycle, sleep + 13
            positive regulation of circadian sleep/wake cycle, wakefulness 4
            positive regulation of locomotor rhythm 0
paths to the root