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ONTOLOGY REPORT - ANNOTATIONS


Term:positive regulation of circadian rhythm
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Accession:GO:0042753 term browser browse the term
Definition:Any process that activates or increases the frequency, rate or extent of a circadian rhythm behavior.
Synonyms:exact_synonym: up regulation of circadian rhythm;   upregulation of circadian rhythm
 narrow_synonym: activation of circadian rhythm;   stimulation of circadian rhythm



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positive regulation of circadian rhythm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arntl aryl hydrocarbon receptor nuclear translocator-like involved_in ISS
ISO
GO_REF:0000024
(MGI:4410413|PMID:19605937), (MGI:5442460|PMID:22653727)
(PMID:23229515)
UniProt
RGD
PMID:19605937 PMID:22653727 PMID:23229515 GO_REF:0000024 MGI:4410413 MGI:5442460 NCBI chr 1:167,331,756...167,430,235
Ensembl chr 1:167,331,633...167,430,231
JBrowse link
G Arntl2 aryl hydrocarbon receptor nuclear translocator-like 2 involved_in ISO (MGI:4410413|PMID:19605937)
(PMID:12738229)
RGD PMID:12738229 PMID:19605937 MGI:4410413 NCBI chr 4:179,699,432...179,747,710
Ensembl chr 4:179,699,502...179,746,949
JBrowse link
G Btrc beta-transducin repeat containing E3 ubiquitin protein ligase involved_in ISO (MGI:4844267|PMID:18782782) RGD PMID:18782782 MGI:4844267 NCBI chr 1:244,210,299...244,380,126
Ensembl chr 1:244,210,314...244,376,721
JBrowse link
G Clock clock circadian regulator involved_in ISO
IEA
(PMID:12738229), (PMID:23229515)
GO_REF:0000107
(MGI:5442460|PMID:22653727)
RGD
Ensembl
PMID:12738229 PMID:22653727 PMID:23229515 GO_REF:0000107 MGI:5442460 NCBI chr14:31,908,542...31,992,673
Ensembl chr14:31,908,566...31,990,400
JBrowse link
G Fbxw11 F-box and WD repeat domain containing 11 involved_in ISO (MGI:4844267|PMID:18782782) RGD PMID:18782782 MGI:4844267 NCBI chr10:17,232,735...17,330,584
Ensembl chr10:17,227,181...17,330,571
JBrowse link
G Kat5 lysine acetyltransferase 5 involved_in ISS
ISO
GO_REF:0000024
(MGI:6331398|PMID:31294688)
UniProt
RGD
PMID:31294688 GO_REF:0000024 MGI:6331398 NCBI chr 1:202,895,751...202,903,178
Ensembl chr 1:202,895,751...202,903,458
JBrowse link
G Mtnr1b melatonin receptor 1B IDA RGD PMID:12643943 RGD:9588678 NCBI chr 8:12,638,219...12,652,737
Ensembl chr 8:12,638,219...12,652,737
JBrowse link
G Nkx2-1 NK2 homeobox 1 involved_in IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(MGI:5574291|PMID:22356123)
Ensembl
UniProt
RGD
PMID:22356123 GO_REF:0000024 GO_REF:0000107 MGI:5574291 NCBI chr 6:73,996,601...74,001,483
Ensembl chr 6:73,996,601...73,999,791
JBrowse link
G Nr1d1 nuclear receptor subfamily 1, group D, member 1 IDA RGD PMID:18946026 RGD:10448985 NCBI chr10:83,728,348...83,735,562
Ensembl chr10:83,728,318...83,735,705
JBrowse link
G Prkg1 protein kinase cGMP-dependent 1 IMP RGD PMID:12930792 RGD:7777105 NCBI chr 1:228,409,883...229,638,794
Ensembl chr 1:228,408,947...229,639,080
JBrowse link
G Rora RAR-related orphan receptor A involved_in ISO (MGI:5504349|PMID:22753030) RGD PMID:22753030 MGI:5504349 NCBI chr 8:69,301,635...70,034,741
Ensembl chr 8:69,301,733...70,025,931
JBrowse link
G Rorc RAR-related orphan receptor C involved_in ISO (MGI:5504349|PMID:22753030) RGD PMID:22753030 MGI:5504349 NCBI chr 2:182,009,707...182,034,910
Ensembl chr 2:182,009,286...182,034,907
JBrowse link
G Thrap3 thyroid hormone receptor associated protein 3 involved_in ISS
ISO
GO_REF:0000024
(PMID:24043798)
UniProt
RGD
PMID:24043798 GO_REF:0000024 NCBI chr 5:138,445,284...138,487,544
Ensembl chr 5:138,445,295...138,487,477
JBrowse link
G Timeless timeless circadian regulator IMP RGD PMID:14564007 RGD:734503 NCBI chr 7:654,804...678,769
Ensembl chr 7:654,822...678,738
JBrowse link
positive regulation of circadian sleep/wake cycle, non-REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alb albumin IDA RGD PMID:9748091 RGD:1625449 NCBI chr14:17,607,397...17,622,814
Ensembl chr14:17,607,381...17,622,836
JBrowse link
G Casp1 caspase 1 IMP RGD PMID:16455762 RGD:2315921 NCBI chr 8:2,587,812...2,597,403
Ensembl chr 8:2,587,831...2,597,383
JBrowse link
G Ghrh growth hormone releasing hormone IMP RGD PMID:19889861 PMID:20237285 RGD:2325188, RGD:10401262 NCBI chr 3:145,992,762...146,012,528
Ensembl chr 3:145,992,763...146,011,889
JBrowse link
G Ghrhr growth hormone releasing hormone receptor IMP RGD PMID:20237285 RGD:10401262 NCBI chr 4:84,498,159...84,532,847
Ensembl chr 4:84,500,212...84,532,776
JBrowse link
G Ghrl ghrelin and obestatin prepropeptide involved_in ISO (PMID:18329818) RGD PMID:18329818 NCBI chr 4:146,865,712...146,869,621
Ensembl chr 4:146,865,712...146,869,621
JBrowse link
G Mtnr1b melatonin receptor 1B IDA
IMP
RGD PMID:19429170 PMID:22171046 RGD:9588660, RGD:9588665 NCBI chr 8:12,638,219...12,652,737
Ensembl chr 8:12,638,219...12,652,737
JBrowse link
G Npy2r neuropeptide Y receptor Y2 IDA RGD PMID:16378653 RGD:1642507 NCBI chr 2:167,901,999...167,912,165
Ensembl chr 2:167,903,879...167,905,024
JBrowse link
G Ptger3 prostaglandin E receptor 3 IMP RGD PMID:10923657 RGD:10043386 NCBI chr 2:246,606,131...246,750,970
Ensembl chr 2:246,606,183...246,684,434
JBrowse link
G Ptger4 prostaglandin E receptor 4 IMP RGD PMID:10923657 RGD:10043386 NCBI chr 2:54,330,563...54,347,451
Ensembl chr 2:54,335,424...54,346,670
JBrowse link
positive regulation of circadian sleep/wake cycle, REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ghrh growth hormone releasing hormone NOT|involved_in ISO (PMID:15538933) RGD PMID:15538933 NCBI chr 3:145,992,762...146,012,528
Ensembl chr 3:145,992,763...146,011,889
JBrowse link
G Pmch pro-melanin-concentrating hormone IDA RGD PMID:12964948 RGD:1642489 NCBI chr 7:22,511,934...22,513,250
Ensembl chr 7:22,511,934...22,513,250
JBrowse link
G Uts2 urotensin 2 IDA RGD PMID:15944374 RGD:2306844 NCBI chr 5:161,450,846...161,456,235
Ensembl chr 5:161,450,846...161,456,237
JBrowse link
G Uts2r urotensin 2 receptor IMP RGD PMID:15944374 RGD:2306844 NCBI chr10:106,438,092...106,439,252
Ensembl chr10:106,438,092...106,439,252
JBrowse link
positive regulation of circadian sleep/wake cycle, sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adora2a adenosine A2a receptor IDA in the sleep-promoting area of the lateral preoptic area of the brain RGD PMID:16109808 RGD:1625234 NCBI chr20:13,315,848...13,333,386
Ensembl chr20:13,315,853...13,333,386
JBrowse link
G Opn4 opsin 4 acts_upstream_of_or_within ISO (MGI:5925970|PMID:26320947) RGD PMID:26320947 MGI:5925970 NCBI chr16:9,920,408...9,929,580
Ensembl chr16:9,920,491...10,005,711
JBrowse link
positive regulation of circadian sleep/wake cycle, wakefulness term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nlgn1 neuroligin 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:5492265|PMID:23716671)
UniProt
RGD
PMID:23716671 GO_REF:0000024 MGI:5492265 NCBI chr 2:108,256,236...109,181,530
Ensembl chr 2:108,257,824...109,002,464
JBrowse link
G Nps neuropeptide S IDA RGD PMID:22300983 RGD:9831203 NCBI chr 1:190,077,040...190,080,821
Ensembl chr 1:190,077,040...190,080,821
JBrowse link
G Uts2 urotensin 2 IDA RGD PMID:15944374 RGD:2306844 NCBI chr 5:161,450,846...161,456,235
Ensembl chr 5:161,450,846...161,456,237
JBrowse link
G Uts2r urotensin 2 receptor IMP RGD PMID:15944374 RGD:2306844 NCBI chr10:106,438,092...106,439,252
Ensembl chr10:106,438,092...106,439,252
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 18734
    positive regulation of biological process 6662
      positive regulation of circadian rhythm 29
        positive regulation of circadian sleep/wake cycle, sleep + 14
        positive regulation of circadian sleep/wake cycle, wakefulness 4
        positive regulation of locomotor rhythm 0
Path 2
Term Annotations click to browse term
  biological_process 18734
    biological regulation 13314
      regulation of biological process 12594
        regulation of circadian rhythm 137
          positive regulation of circadian rhythm 29
            positive regulation of circadian sleep/wake cycle, sleep + 14
            positive regulation of circadian sleep/wake cycle, wakefulness 4
            positive regulation of locomotor rhythm 0
paths to the root