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ONTOLOGY REPORT - ANNOTATIONS


Term:regulation of circadian rhythm
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Accession:GO:0042752 term browser browse the term
Definition:Any process that modulates the frequency, rate or extent of a circadian rhythm. A circadian rhythm is a biological process in an organism that recurs with a regularity of approximately 24 hours.



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regulation of circadian rhythm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADCY1 adenylate cyclase 1 involved_in ISS
IEA
UniProt
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr 7:45,574,140...45,723,116
Ensembl chr 7:45,574,140...45,723,116
JBrowse link
G ATG7 autophagy related 7 involved_in ISS UniProt
UniProt
GO_REF:0000024 NCBI chr 3:11,272,397...11,576,353
Ensembl chr 3:11,272,309...11,557,665
JBrowse link
G BHLHE40 basic helix-loop-helix family member e40 involved_in ISS
IEA
UniProt
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr 3:4,979,437...4,985,323
Ensembl chr 3:4,979,437...4,985,323
JBrowse link
G BTRC beta-transducin repeat containing E3 ubiquitin protein ligase involved_in IDA (PMID:15917222) UniProt
UniProt
PMID:15917222 NCBI chr10:101,354,048...101,557,313
Ensembl chr10:101,354,033...101,557,321
JBrowse link
G CCAR2 cell cycle and apoptosis regulator 2 involved_in ISS
IEA
UniProt
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr 8:22,604,757...22,621,514
Ensembl chr 8:22,604,757...22,620,964
JBrowse link
G CDK1 cyclin dependent kinase 1 involved_in IMP (PMID:27238018) UniProt
UniProt
PMID:27238018 NCBI chr10:60,778,331...60,794,852
Ensembl chr10:60,778,331...60,794,852
JBrowse link
G CLOCK clock circadian regulator involved_in ISS
IEA
UniProt
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr 4:55,427,903...55,546,909
Ensembl chr 4:55,427,903...55,546,909
JBrowse link
G CREB1 cAMP responsive element binding protein 1 ISO RGD PMID:12409294 RGD:633667 NCBI chr 2:207,529,962...207,605,988
Ensembl chr 2:207,529,737...207,605,988
JBrowse link
G CREM cAMP responsive element modulator ISO RGD PMID:15936880 RGD:1582464 NCBI chr10:35,126,846...35,212,958
Ensembl chr10:35,126,791...35,212,958
JBrowse link
G CRY1 cryptochrome circadian regulator 1 involved_in ISS
IEA
UniProt
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr12:106,991,364...107,093,549
Ensembl chr12:106,991,364...107,093,549
JBrowse link
G CRY2 cryptochrome circadian regulator 2 involved_in ISS
IEA
UniProt
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr11:45,847,118...45,883,244
Ensembl chr11:45,847,118...45,883,248
JBrowse link
G CSNK1D casein kinase 1 delta involved_in IBA
ISS
(PMID:21873635) GO_Central
GO_Central
UniProt
UniProt
PMID:21873635 GO_REF:0000024 NCBI chr17:82,239,019...82,273,750
Ensembl chr17:82,239,023...82,273,700
JBrowse link
G CSNK1E casein kinase 1 epsilon involved_in ISS
IEA
UniProt
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr22:38,290,691...38,318,084
Ensembl chr22:38,290,691...38,318,084
JBrowse link
G DDB1 damage specific DNA binding protein 1 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr11:61,299,451...61,333,105
Ensembl chr11:61,299,451...61,342,596
JBrowse link
G DRD4 dopamine receptor D4 involved_in ISS
IEA
UniProt
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr11:637,269...640,706
Ensembl chr11:637,269...640,706
JBrowse link
G EZH2 enhancer of zeste 2 polycomb repressive complex 2 subunit involved_in IMP
IEA
(PMID:16717091) UniProt
Ensembl
UniProt
PMID:16717091 GO_REF:0000107 NCBI chr 7:148,807,383...148,884,291
Ensembl chr 7:148,807,257...148,884,321
JBrowse link
G FBXL3 F-box and leucine rich repeat protein 3 involved_in IMP
IEA
(PMID:17463251) UniProt
UniProt
Ensembl
PMID:17463251 GO_REF:0000107 NCBI chr13:77,005,260...77,027,159
Ensembl chr13:76,992,598...77,027,195
JBrowse link
G FBXW7 F-box and WD repeat domain containing 7 involved_in IMP
IEA
(PMID:27238018) UniProt
Ensembl
UniProt
PMID:27238018 GO_REF:0000107 NCBI chr 4:152,320,544...152,536,092
Ensembl chr 4:152,320,544...152,536,092
JBrowse link
G GSK3B glycogen synthase kinase 3 beta involved_in ISS UniProt
UniProt
GO_REF:0000024 NCBI chr 3:119,821,321...120,094,447
Ensembl chr 3:119,821,321...120,094,994
JBrowse link
G HDAC3 histone deacetylase 3 involved_in ISS
IEA
UniProt
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr 5:141,620,881...141,636,849
Ensembl chr 5:141,620,876...141,636,849
JBrowse link
G HNF4A hepatocyte nuclear factor 4 alpha involved_in IMP
IEA
(PMID:30530698) UniProt
Ensembl
UniProt
PMID:30530698 GO_REF:0000107 NCBI chr20:44,355,699...44,434,596
Ensembl chr20:44,355,699...44,432,845
JBrowse link
G HNRNPD heterogeneous nuclear ribonucleoprotein D involved_in IMP (PMID:24423872) UniProt
UniProt
PMID:24423872 NCBI chr 4:82,352,498...82,373,991
Ensembl chr 4:82,352,498...82,374,503
JBrowse link
G ID2 inhibitor of DNA binding 2 involved_in ISS UniProt
UniProt
GO_REF:0000024 NCBI chr 2:8,682,056...8,684,461
Ensembl chr 2:8,678,845...8,684,461
JBrowse link
G KDM2A lysine demethylase 2A involved_in IMP (PMID:26037310) UniProt
UniProt
PMID:26037310 NCBI chr11:67,119,263...67,258,082
Ensembl chr11:67,119,263...67,258,082
JBrowse link
G KLF10 KLF transcription factor 10 involved_in ISS UniProt
UniProt
GO_REF:0000024 NCBI chr 8:102,648,784...102,655,725
Ensembl chr 8:102,648,784...102,655,725
JBrowse link
G MAGED1 MAGE family member D1 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr  X:51,803,076...51,902,354
Ensembl chr  X:51,803,007...51,902,354
JBrowse link
G MAGEL2 MAGE family member L2 involved_in ISS
IEA
UniProt
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr15:23,643,549...23,647,867
Ensembl chr15:23,643,549...23,647,867
JBrowse link
G MAPK10 mitogen-activated protein kinase 10 involved_in ISS UniProt
UniProt
GO_REF:0000024 NCBI chr 4:86,010,405...86,594,074
Ensembl chr 4:85,990,007...86,594,625
JBrowse link
G MAPK8 mitogen-activated protein kinase 8 involved_in ISS UniProt
UniProt
GO_REF:0000024 NCBI chr10:48,306,677...48,439,360
Ensembl chr10:48,306,639...48,439,360
JBrowse link
G MAPK9 mitogen-activated protein kinase 9 involved_in ISS
IEA
UniProt
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr 5:180,233,143...180,292,083
Ensembl chr 5:180,233,143...180,292,099
JBrowse link
G MTOR mechanistic target of rapamycin kinase involved_in ISS
IEA
UniProt
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr 1:11,106,535...11,262,551
Ensembl chr 1:11,106,535...11,262,556
JBrowse link
G NOCT nocturnin involved_in ISS
IEA
UniProt
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr 4:139,015,781...139,045,939
Ensembl chr 4:139,015,781...139,045,939
JBrowse link
G NONO non-POU domain containing octamer binding involved_in ISS
IEA
UniProt
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr  X:71,283,635...71,301,168
Ensembl chr  X:71,254,814...71,301,522
JBrowse link
G NPAS2 neuronal PAS domain protein 2 involved_in ISO (MGI:5518489|PMID:24048828) UniProt PMID:24048828 MGI:5518489 NCBI chr 2:100,818,723...100,996,829
Ensembl chr 2:100,820,139...100,996,829
JBrowse link
G NR1D1 nuclear receptor subfamily 1 group D member 1 involved_in ISS
IEA
UniProt
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr17:40,092,793...40,100,589
Ensembl chr17:40,092,793...40,100,589
JBrowse link
G NR1D2 nuclear receptor subfamily 1 group D member 2 involved_in ISS
IEA
UniProt
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr 3:23,945,286...23,980,617
Ensembl chr 3:23,945,286...23,980,617
JBrowse link
G NR1H3 nuclear receptor subfamily 1 group H member 3 involved_in TAS (PMID:18511497) BHF-UCL
BHF-UCL
PMID:18511497 NCBI chr11:47,248,300...47,269,033
Ensembl chr11:47,248,300...47,269,033
JBrowse link
G OPN3 opsin 3 involved_in NAS (PMID:10234000) UniProt
UniProt
PMID:10234000 NCBI chr 1:241,593,124...241,640,369
Ensembl chr 1:241,590,102...241,677,376
Ensembl chr 1:241,590,102...241,677,376
JBrowse link
G OPN4 opsin 4 involved_in ISS
IEA
UniProt
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr10:86,654,547...86,666,460
Ensembl chr10:86,654,518...86,666,460
JBrowse link
G PER1 period circadian regulator 1 involved_in ISS
IEA
UniProt
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr17:8,140,472...8,152,404
Ensembl chr17:8,140,472...8,156,506
JBrowse link
G PER2 period circadian regulator 2 involved_in ISS UniProt
UniProt
GO_REF:0000024 NCBI chr 2:238,244,044...238,300,065
Ensembl chr 2:238,244,044...238,290,102
JBrowse link
G PML PML nuclear body scaffold involved_in ISS
IEA
UniProt
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr15:73,994,716...74,047,827
Ensembl chr15:73,994,673...74,047,827
JBrowse link
G PPARA peroxisome proliferator activated receptor alpha involved_in ISS
IEA
UniProt
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr22:46,150,526...46,243,756
Ensembl chr22:46,150,521...46,243,755
JBrowse link
G PPARG peroxisome proliferator activated receptor gamma involved_in ISS UniProt
UniProt
GO_REF:0000024 NCBI chr 3:12,287,368...12,434,344
Ensembl chr 3:12,287,368...12,434,356
JBrowse link
G PPARGC1A PPARG coactivator 1 alpha involved_in ISS
IEA
UniProt
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr 4:23,792,021...24,472,905
Ensembl chr 4:23,755,041...23,904,089
JBrowse link
G PPP1CA protein phosphatase 1 catalytic subunit alpha involved_in IMP
IEA
(PMID:21712997) UniProt
UniProt
Ensembl
PMID:21712997 GO_REF:0000107 NCBI chr11:67,398,183...67,401,858
Ensembl chr11:67,398,181...67,421,183
JBrowse link
G PPP1CB protein phosphatase 1 catalytic subunit beta involved_in IMP
IEA
IBA
(PMID:21712997)
(PMID:21873635)
UniProt
Ensembl
GO_Central
UniProt
GO_Central
PMID:21712997 PMID:21873635 GO_REF:0000107 NCBI chr 2:28,751,604...28,802,940
Ensembl chr 2:28,751,640...28,802,940
JBrowse link
G PPP1CC protein phosphatase 1 catalytic subunit gamma involved_in IMP
IEA
(PMID:21712997) UniProt
Ensembl
UniProt
PMID:21712997 GO_REF:0000107 NCBI chr12:110,708,376...110,742,891
Ensembl chr12:110,719,680...110,742,939
JBrowse link
G PRKAA1 protein kinase AMP-activated catalytic subunit alpha 1 involved_in ISS
IEA
UniProt
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr 5:40,759,389...40,798,374
Ensembl chr 5:40,759,389...40,798,374
JBrowse link
G PRKAA2 protein kinase AMP-activated catalytic subunit alpha 2 involved_in ISS
IEA
UniProt
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr 1:56,645,314...56,715,335
Ensembl chr 1:56,645,314...56,715,335
JBrowse link
G PRKCG protein kinase C gamma involved_in ISS
IEA
UniProt
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr19:53,881,094...53,907,652
Ensembl chr19:53,879,190...53,907,652
JBrowse link
G PRKDC protein kinase, DNA-activated, catalytic subunit involved_in ISS
IEA
UniProt
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr 8:47,773,111...47,960,136
Ensembl chr 8:47,773,111...47,960,178
JBrowse link
G PROX1 prospero homeobox 1 involved_in IMP (PMID:23723244) UniProt
UniProt
PMID:23723244 NCBI chr 1:213,983,151...214,041,510
Ensembl chr 1:213,983,181...214,041,510
JBrowse link
G PSPC1 paraspeckle component 1 involved_in ISS
IEA
UniProt
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr13:19,671,205...19,782,945
Ensembl chr13:19,674,752...19,783,019
JBrowse link
G ROCK2 Rho associated coiled-coil containing protein kinase 2 involved_in ISS UniProt
UniProt
GO_REF:0000024 NCBI chr 2:11,179,759...11,345,437
Ensembl chr 2:11,179,759...11,348,330
JBrowse link
G RORA RAR related orphan receptor A involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:60,488,284...61,229,302
Ensembl chr15:60,488,284...61,229,302
JBrowse link
G RORB RAR related orphan receptor B involved_in ISS
IEA
UniProt
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr 9:74,497,335...74,693,177
Ensembl chr 9:74,497,335...74,693,177
JBrowse link
G SFPQ splicing factor proline and glutamine rich involved_in ISS UniProt
UniProt
GO_REF:0000024 NCBI chr 1:35,176,380...35,193,145
Ensembl chr 1:35,176,378...35,193,446
JBrowse link
G SIAH2 siah E3 ubiquitin protein ligase 2 involved_in IMP
IEA
(PMID:26392558) UniProt
Ensembl
UniProt
PMID:26392558 GO_REF:0000107 NCBI chr 3:150,741,125...150,763,169
Ensembl chr 3:150,741,125...150,763,477
JBrowse link
G SIRT6 sirtuin 6 involved_in ISS
IEA
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr19:4,174,109...4,182,563
Ensembl chr19:4,174,109...4,182,566
JBrowse link
G SPSB4 splA/ryanodine receptor domain and SOCS box containing 4 involved_in IMP (PMID:26392558) UniProt
UniProt
PMID:26392558 NCBI chr 3:141,051,347...141,148,611
Ensembl chr 3:141,051,347...141,148,611
JBrowse link
G SRRD SRR1 domain containing involved_in ISS UniProt
UniProt
GO_REF:0000024 NCBI chr22:26,483,877...26,494,658
Ensembl chr22:26,483,877...26,494,658
JBrowse link
G TARDBP TAR DNA binding protein involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 1:11,012,654...11,030,528
Ensembl chr 1:11,012,344...11,030,528
JBrowse link
G TIMELESS timeless circadian regulator involved_in IMP
IEA
(PMID:23418588) UniProt
Ensembl
UniProt
PMID:23418588 GO_REF:0000107 NCBI chr12:56,416,363...56,449,426
Ensembl chr12:56,416,363...56,449,426
JBrowse link
G TOP2A DNA topoisomerase II alpha involved_in ISS
IEA
UniProt
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr17:40,388,525...40,417,896
Ensembl chr17:40,388,525...40,417,896
JBrowse link
G TPTEP2-CSNK1E TPTEP2-CSNK1E readthrough involved_in ISS
IEA
UniProt
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr22:38,290,691...38,398,915
Ensembl chr22:38,291,918...38,398,522
JBrowse link
G UBE3A ubiquitin protein ligase E3A involved_in IMP
IEA
(PMID:24728990) UniProt
Ensembl
UniProt
PMID:24728990 GO_REF:0000107 NCBI chr15:25,333,728...25,439,056
Ensembl chr15:25,333,728...25,439,051
JBrowse link
G USP7 ubiquitin specific peptidase 7 involved_in IDA (PMID:27123980) UniProt
UniProt
PMID:27123980 NCBI chr16:8,892,097...8,963,906
Ensembl chr16:8,892,097...8,975,328
JBrowse link
G USP9X ubiquitin specific peptidase 9 X-linked involved_in IMP (PMID:29626158) UniProt
UniProt
PMID:29626158 NCBI chr  X:41,085,445...41,236,579
Ensembl chr  X:41,085,445...41,236,579
JBrowse link
entrainment of circadian clock term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATOH7 atonal bHLH transcription factor 7 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2445865|PMID:12451142) MGI
Ensembl
PMID:12451142 GO_REF:0000107 MGI:2445865 NCBI chr10:68,230,595...68,232,113
Ensembl chr10:68,230,595...68,232,113
JBrowse link
G BMAL2 basic helix-loop-helix ARNT like 2 involved_in NAS (PMID:11018023) UniProt
UniProt
PMID:11018023 NCBI chr12:27,332,836...27,425,286
Ensembl chr12:27,332,836...27,425,289
JBrowse link
G CHRM1 cholinergic receptor muscarinic 1 involved_in ISO (PMID:12196552) AgBase PMID:12196552 NCBI chr11:62,908,679...62,921,878
Ensembl chr11:62,908,679...62,921,807
JBrowse link
G CLOCK clock circadian regulator ISO RGD PMID:10095082 RGD:632379 NCBI chr 4:55,427,903...55,546,909
Ensembl chr 4:55,427,903...55,546,909
JBrowse link
G GNA11 G protein subunit alpha 11 involved_in ISS AgBase
AgBase
GO_REF:0000024 NCBI chr19:3,094,362...3,123,999
Ensembl chr19:3,094,362...3,123,999
JBrowse link
G GNAQ G protein subunit alpha q involved_in ISS AgBase
AgBase
GO_REF:0000024 NCBI chr 9:77,716,097...78,031,811
Ensembl chr 9:77,716,097...78,031,811
JBrowse link
G ID2 inhibitor of DNA binding 2 acts_upstream_of_or_within ISO (MGI:3838062|PMID:19217292) MGI PMID:19217292 MGI:3838062 NCBI chr 2:8,682,056...8,684,461
Ensembl chr 2:8,678,845...8,684,461
JBrowse link
G PER1 period circadian regulator 1 involved_in TAS (PMID:9323128) PINC
PINC
PMID:9323128 NCBI chr17:8,140,472...8,152,404
Ensembl chr17:8,140,472...8,156,506
JBrowse link
G PHLPP1 PH domain and leucine rich repeat protein phosphatase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4420841|PMID:20080691) Ensembl
Ensembl
MGI
PMID:20080691 GO_REF:0000107 MGI:4420841 NCBI chr18:62,715,541...62,980,433
Ensembl chr18:62,715,541...62,980,433
JBrowse link
G SOX14 SRY-box transcription factor 14 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5440343|PMID:22920256) Ensembl
Ensembl
MGI
PMID:22920256 GO_REF:0000107 MGI:5440343 NCBI chr 3:137,764,315...137,766,334
Ensembl chr 3:137,764,315...137,766,334
JBrowse link
entrainment of circadian clock by photoperiod term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AC074143.1 novel protein involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 Ensembl chr16:67,163,385...67,165,815 JBrowse link
G ATOH7 atonal bHLH transcription factor 7 involved_in ISS
IEA
UniProt
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr10:68,230,595...68,232,113
Ensembl chr10:68,230,595...68,232,113
JBrowse link
G BHLHE40 basic helix-loop-helix family member e40 involved_in ISS
IEA
(PMID:18411297) BHF-UCL
BHF-UCL
Ensembl
PMID:18411297 GO_REF:0000107 NCBI chr 3:4,979,437...4,985,323
Ensembl chr 3:4,979,437...4,985,323
JBrowse link
G CRTC1 CREB regulated transcription coactivator 1 involved_in ISS
IEA
UniProt
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr19:18,683,680...18,782,333
Ensembl chr19:18,683,678...18,782,333
JBrowse link
G CRY1 cryptochrome circadian regulator 1 involved_in ISS
IEA
IBA
(PMID:21873635) UniProt
Ensembl
GO_Central
UniProt
GO_Central
PMID:21873635 GO_REF:0000024 GO_REF:0000107 NCBI chr12:106,991,364...107,093,549
Ensembl chr12:106,991,364...107,093,549
JBrowse link
G CRY2 cryptochrome circadian regulator 2 involved_in IBA
ISS
IEA
(PMID:21873635) GO_Central
UniProt
GO_Central
Ensembl
UniProt
PMID:21873635 GO_REF:0000024 GO_REF:0000107 NCBI chr11:45,847,118...45,883,244
Ensembl chr11:45,847,118...45,883,248
JBrowse link
G FBXL12 F-box and leucine rich repeat protein 12 involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr19:9,810,270...9,819,079
Ensembl chr19:9,810,267...9,827,816
JBrowse link
G FBXL17 F-box and leucine rich repeat protein 17 involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr 5:107,859,035...108,382,098
Ensembl chr 5:107,859,035...108,382,098
JBrowse link
G FBXL21P F-box and leucine rich repeat protein 21, pseudogene involved_in IBA
ISS
(PMID:21873635) GO_Central
UniProt
GO_Central
UniProt
PMID:21873635 GO_REF:0000024 NCBI chr 5:135,930,297...135,941,996
Ensembl chr 5:135,930,317...135,951,591
JBrowse link
G FBXL22 F-box and leucine rich repeat protein 22 involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr15:63,597,387...63,608,516
Ensembl chr15:63,597,353...63,602,428
JBrowse link
G FBXL3 F-box and leucine rich repeat protein 3 involved_in ISS
IEA
IBA
(PMID:21873635) UniProt
UniProt
Ensembl
GO_Central
GO_Central
PMID:21873635 GO_REF:0000024 GO_REF:0000107 NCBI chr13:77,005,260...77,027,159
Ensembl chr13:76,992,598...77,027,195
JBrowse link
G FBXL6 F-box and leucine rich repeat protein 6 involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr 8:144,355,431...144,358,472
Ensembl chr 8:144,355,431...144,359,376
JBrowse link
G FBXL8 F-box and leucine rich repeat protein 8 involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr16:67,159,957...67,164,174
Ensembl chr16:67,159,932...67,164,570
JBrowse link
G ID2 inhibitor of DNA binding 2 involved_in ISS UniProt
UniProt
GO_REF:0000024 NCBI chr 2:8,682,056...8,684,461
Ensembl chr 2:8,678,845...8,684,461
JBrowse link
G MTA1 metastasis associated 1 involved_in ISS
IEA
UniProt
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr14:105,419,827...105,470,729
Ensembl chr14:105,419,820...105,470,729
JBrowse link
G NR2F6 nuclear receptor subfamily 2 group F member 6 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3530176|PMID:15741322) Ensembl
Ensembl
MGI
PMID:15741322 GO_REF:0000107 MGI:3530176 NCBI chr19:17,231,883...17,245,919
Ensembl chr19:17,231,883...17,245,919
JBrowse link
G OPN4 opsin 4 acts_upstream_of_or_within ISO (MGI:5925970|PMID:26320947) MGI PMID:26320947 MGI:5925970 NCBI chr10:86,654,547...86,666,460
Ensembl chr10:86,654,518...86,666,460
JBrowse link
G OPN5 opsin 5 involved_in ISS
IEA
UniProt
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr 6:47,782,032...47,826,381
Ensembl chr 6:47,781,982...47,832,780
JBrowse link
G PDE6B phosphodiesterase 6B involved_in ISS
IEA
UniProt
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr 4:625,573...670,782
Ensembl chr 4:625,573...670,782
JBrowse link
G PER1 period circadian regulator 1 involved_in ISS
IBA
IEA
(PMID:21873635) UniProt
UniProt
GO_Central
Ensembl
GO_Central
PMID:21873635 GO_REF:0000024 GO_REF:0000107 NCBI chr17:8,140,472...8,152,404
Ensembl chr17:8,140,472...8,156,506
JBrowse link
G PER2 period circadian regulator 2 involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr 2:238,244,044...238,300,065
Ensembl chr 2:238,244,044...238,290,102
JBrowse link
G PER3 period circadian regulator 3 involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr 1:7,784,291...7,845,177
Ensembl chr 1:7,784,291...7,845,177
JBrowse link
G PML PML nuclear body scaffold involved_in ISS
IEA
UniProt
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr15:73,994,716...74,047,827
Ensembl chr15:73,994,673...74,047,827
JBrowse link
G PPP1CA protein phosphatase 1 catalytic subunit alpha involved_in ISS
IEA
UniProt
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr11:67,398,183...67,401,858
Ensembl chr11:67,398,181...67,421,183
JBrowse link
G PPP1CB protein phosphatase 1 catalytic subunit beta involved_in ISS
IEA
UniProt
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr 2:28,751,604...28,802,940
Ensembl chr 2:28,751,640...28,802,940
JBrowse link
G PPP1CC protein phosphatase 1 catalytic subunit gamma involved_in ISS
IEA
UniProt
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr12:110,708,376...110,742,891
Ensembl chr12:110,719,680...110,742,939
JBrowse link
G RBM4 RNA binding motif protein 4 involved_in ISS
IEA
UniProt
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr11:66,638,703...66,668,380
Ensembl chr11:66,638,667...66,668,374
JBrowse link
G RBM4B RNA binding motif protein 4B involved_in ISS
IEA
UniProt
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr11:66,664,998...66,677,887
Ensembl chr11:66,664,998...66,677,887
JBrowse link
G SIK1 salt inducible kinase 1 involved_in ISS
IEA
UniProt
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr21:43,414,483...43,427,131
Ensembl chr21:43,414,483...43,427,131
JBrowse link
G SIK1B salt inducible kinase 1B (putative) involved_in ISS
IEA
UniProt
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr21:6,111,131...6,123,778
Ensembl chr21:6,111,131...6,123,778
JBrowse link
G TP53 tumor protein p53 involved_in ISS
IEA
UniProt
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr17:7,668,421...7,687,490
Ensembl chr17:7,661,779...7,687,538
JBrowse link
G USP2 ubiquitin specific peptidase 2 involved_in ISS
IEA
UniProt
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr11:119,355,215...119,381,690
Ensembl chr11:119,355,215...119,381,711
JBrowse link
negative regulation of circadian rhythm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AC007375.2 novel protein involved_in IEA InterPro
InterPro
GO_REF:0000002 Ensembl chr14:77,098,311...77,225,462 JBrowse link
G CIPC CLOCK interacting pacemaker involved_in ISS
IEA
UniProt
InterPro
UniProt
Ensembl
InterPro
GO_REF:0000002 GO_REF:0000024 GO_REF:0000107 NCBI chr14:77,098,258...77,117,287
Ensembl chr14:77,098,126...77,117,287
JBrowse link
G CRY1 cryptochrome circadian regulator 1 involved_in ISS
IEA
UniProt
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr12:106,991,364...107,093,549
Ensembl chr12:106,991,364...107,093,549
JBrowse link
G CRY2 cryptochrome circadian regulator 2 involved_in ISS
IEA
UniProt
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr11:45,847,118...45,883,244
Ensembl chr11:45,847,118...45,883,248
JBrowse link
G PASD1 PAS domain containing repressor 1 involved_in IBA
IDA
(PMID:21873635)
(PMID:25936801)
GO_Central
GO_Central
UniProt
UniProt
PMID:21873635 PMID:25936801 NCBI chr  X:151,563,675...151,676,739
Ensembl chr  X:151,563,675...151,676,739
JBrowse link
G PER2 period circadian regulator 2 involved_in ISS UniProt
UniProt
GO_REF:0000024 NCBI chr 2:238,244,044...238,300,065
Ensembl chr 2:238,244,044...238,290,102
JBrowse link
G PIWIL2 piwi like RNA-mediated gene silencing 2 involved_in IMP
IEA
(PMID:28903391) UniProt
UniProt
Ensembl
PMID:28903391 GO_REF:0000107 NCBI chr 8:22,275,316...22,357,568
Ensembl chr 8:22,275,316...22,357,568
JBrowse link
G SFPQ splicing factor proline and glutamine rich involved_in ISS UniProt
UniProt
GO_REF:0000024 NCBI chr 1:35,176,380...35,193,145
Ensembl chr 1:35,176,378...35,193,446
JBrowse link
G SIN3A SIN3 transcription regulator family member A involved_in ISS
IEA
UniProt
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr15:75,369,379...75,455,815
Ensembl chr15:75,369,379...75,455,842
JBrowse link
G SUV39H1 SUV39H1 histone lysine methyltransferase involved_in ISS UniProt
UniProt
GO_REF:0000024 NCBI chr  X:48,695,554...48,709,016
Ensembl chr  X:48,695,554...48,709,016
JBrowse link
G SUV39H2 SUV39H2 histone lysine methyltransferase involved_in ISS UniProt
UniProt
GO_REF:0000024 NCBI chr10:14,878,866...14,904,315
Ensembl chr10:14,878,820...14,904,315
JBrowse link
negative regulation of circadian sleep/wake cycle, non-REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADA adenosine deaminase ISO RGD PMID:19066225 RGD:5128864 NCBI chr20:44,619,522...44,651,699
Ensembl chr20:44,584,896...44,652,252
JBrowse link
G ADORA1 adenosine A1 receptor involved_in IEA
ISO
Ensembl
Ensembl
RGD
PMID:19491711 GO_REF:0000107 RGD:2317916 NCBI chr 1:203,127,726...203,167,405
Ensembl chr 1:203,090,654...203,167,405
JBrowse link
negative regulation of circadian sleep/wake cycle, REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CRH corticotropin releasing hormone involved_in NAS (PMID:18329818) BHF-UCL
BHF-UCL
PMID:18329818 NCBI chr 8:66,176,376...66,178,464
Ensembl chr 8:66,176,376...66,178,464
JBrowse link
G GHRL ghrelin and obestatin prepropeptide involved_in IDA (PMID:18329818) BHF-UCL
BHF-UCL
PMID:18329818 NCBI chr 3:10,285,666...10,292,947
Ensembl chr 3:10,285,666...10,292,947
JBrowse link
G HTR7 5-hydroxytryptamine receptor 7 ISO RGD PMID:18466985 RGD:6480669 NCBI chr10:90,740,823...90,858,039
Ensembl chr10:90,740,823...90,858,039
JBrowse link
G PTGER4 prostaglandin E receptor 4 ISO RGD PMID:10923657 RGD:10043386 NCBI chr 5:40,679,915...40,746,800
Ensembl chr 5:40,679,915...40,693,735
JBrowse link
negative regulation of circadian sleep/wake cycle, sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADORA1 adenosine A1 receptor involved_in ISO
IEA
in the sleep-promoting area of the lateral preoptic area of the brain RGD
Ensembl
PMID:16109808 GO_REF:0000107 RGD:1625234 NCBI chr 1:203,127,726...203,167,405
Ensembl chr 1:203,090,654...203,167,405
JBrowse link
G DRD1 dopamine receptor D1 ISO RGD PMID:12944496 RGD:1581422 NCBI chr 5:175,440,036...175,444,182
Ensembl chr 5:175,440,036...175,444,182
JBrowse link
G DRD2 dopamine receptor D2 involved_in IEA
ISO
Ensembl
Ensembl
RGD
PMID:12944496 GO_REF:0000107 RGD:1581422 NCBI chr11:113,409,605...113,475,398
Ensembl chr11:113,409,605...113,475,691
JBrowse link
negative regulation of circadian sleep/wake cycle, wakefulness term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PTGER3 prostaglandin E receptor 3 ISO RGD PMID:10923657 RGD:10043386 NCBI chr 1:70,852,358...71,047,816
Ensembl chr 1:70,852,353...71,047,816
JBrowse link
negative regulation of locomotor rhythm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LEPR leptin receptor ISO RGD PMID:16982424 RGD:10412019 NCBI chr 1:65,420,652...65,641,559
Ensembl chr 1:65,420,652...65,641,559
JBrowse link
positive regulation of circadian rhythm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMAL1 basic helix-loop-helix ARNT like 1 involved_in ISS
IDA
(PMID:23229515) UniProt
ComplexPortal
UniProt
ComplexPortal
PMID:23229515 GO_REF:0000024 NCBI chr11:13,276,652...13,387,266
Ensembl chr11:13,276,652...13,387,266
JBrowse link
G BMAL2 basic helix-loop-helix ARNT like 2 involved_in ISS
IEA
IDA
(PMID:12738229) UniProt
UniProt
Ensembl
ComplexPortal
ComplexPortal
PMID:12738229 GO_REF:0000024 GO_REF:0000107 NCBI chr12:27,332,836...27,425,286
Ensembl chr12:27,332,836...27,425,289
JBrowse link
G BTRC beta-transducin repeat containing E3 ubiquitin protein ligase involved_in ISS
IEA
UniProt
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr10:101,354,048...101,557,313
Ensembl chr10:101,354,033...101,557,321
JBrowse link
G CLOCK clock circadian regulator involved_in IDA
IEA
(PMID:12738229), (PMID:23229515) ComplexPortal
ComplexPortal
Ensembl
PMID:12738229 PMID:23229515 GO_REF:0000107 NCBI chr 4:55,427,903...55,546,909
Ensembl chr 4:55,427,903...55,546,909
JBrowse link
G FBXW11 F-box and WD repeat domain containing 11 involved_in IEA
ISS
Ensembl
Ensembl
UniProt
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr 5:171,861,549...172,006,638
Ensembl chr 5:171,861,549...172,006,873
JBrowse link
G KAT5 lysine acetyltransferase 5 involved_in ISS
IEA
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr11:65,712,018...65,719,604
Ensembl chr11:65,711,996...65,719,604
JBrowse link
G MTNR1B melatonin receptor 1B involved_in ISO
IEA
RGD
Ensembl
PMID:12643943 GO_REF:0000107 RGD:9588678 NCBI chr11:92,969,651...92,984,960
Ensembl chr11:92,969,651...92,985,066
JBrowse link
G NKX2-1 NK2 homeobox 1 involved_in ISS
IEA
UniProt
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr14:36,516,397...36,520,232
Ensembl chr14:36,516,392...36,521,149
JBrowse link
G NR1D1 nuclear receptor subfamily 1 group D member 1 ISO RGD PMID:18946026 RGD:10448985 NCBI chr17:40,092,793...40,100,589
Ensembl chr17:40,092,793...40,100,589
JBrowse link
G PRKG1 protein kinase cGMP-dependent 1 ISO RGD PMID:12930792 RGD:7777105 NCBI chr10:50,990,888...52,298,350
Ensembl chr10:50,990,888...52,298,423
JBrowse link
G RORA RAR related orphan receptor A involved_in ISS
IEA
UniProt
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr15:60,488,284...61,229,302
Ensembl chr15:60,488,284...61,229,302
JBrowse link
G RORC RAR related orphan receptor C involved_in ISS UniProt
UniProt
GO_REF:0000024 NCBI chr 1:151,806,071...151,831,802
Ensembl chr 1:151,806,071...151,831,845
JBrowse link
G THRAP3 thyroid hormone receptor associated protein 3 involved_in IMP (PMID:24043798) UniProt
UniProt
PMID:24043798 NCBI chr 1:36,207,637...36,305,357
Ensembl chr 1:36,224,432...36,305,357
JBrowse link
G TIMELESS timeless circadian regulator ISO RGD PMID:14564007 RGD:734503 NCBI chr12:56,416,363...56,449,426
Ensembl chr12:56,416,363...56,449,426
JBrowse link
positive regulation of circadian sleep/wake cycle, non-REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALB albumin ISO RGD PMID:9748091 RGD:1625449 NCBI chr 4:73,404,287...73,421,482
Ensembl chr 4:73,397,114...73,421,482
JBrowse link
G CASP1 caspase 1 ISO RGD PMID:16455762 RGD:2315921 NCBI chr11:105,025,443...105,036,686
Ensembl chr11:105,025,397...105,035,250
JBrowse link
G GHRH growth hormone releasing hormone ISO RGD PMID:19889861 PMID:20237285 RGD:10401262 RGD:2325188 NCBI chr20:37,251,086...37,261,814
Ensembl chr20:37,251,086...37,261,819
JBrowse link
G GHRHR growth hormone releasing hormone receptor involved_in IEA
ISO
Ensembl
Ensembl
RGD
PMID:20237285 GO_REF:0000107 RGD:10401262 NCBI chr 7:30,963,953...30,979,528
Ensembl chr 7:30,938,669...30,993,254
JBrowse link
G GHRL ghrelin and obestatin prepropeptide involved_in IDA (PMID:18329818) BHF-UCL
BHF-UCL
PMID:18329818 NCBI chr 3:10,285,666...10,292,947
Ensembl chr 3:10,285,666...10,292,947
JBrowse link
G MTNR1B melatonin receptor 1B involved_in IEA
ISO
Ensembl
Ensembl
RGD
PMID:19429170 PMID:22171046 GO_REF:0000107 RGD:9588660 RGD:9588665 NCBI chr11:92,969,651...92,984,960
Ensembl chr11:92,969,651...92,985,066
JBrowse link
G NPY2R neuropeptide Y receptor Y2 ISO RGD PMID:16378653 RGD:1642507 NCBI chr 4:155,173,723...155,217,076
Ensembl chr 4:155,208,636...155,217,078
JBrowse link
G PTGER3 prostaglandin E receptor 3 ISO RGD PMID:10923657 RGD:10043386 NCBI chr 1:70,852,358...71,047,816
Ensembl chr 1:70,852,353...71,047,816
JBrowse link
G PTGER4 prostaglandin E receptor 4 ISO RGD PMID:10923657 RGD:10043386 NCBI chr 5:40,679,915...40,746,800
Ensembl chr 5:40,679,915...40,693,735
JBrowse link
positive regulation of circadian sleep/wake cycle, REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GHRH growth hormone releasing hormone NOT|involved_in IMP
NAS
(PMID:15538933)
(PMID:18329818)
BHF-UCL
BHF-UCL
PMID:15538933 PMID:18329818 NCBI chr20:37,251,086...37,261,814
Ensembl chr20:37,251,086...37,261,819
JBrowse link
G PMCH pro-melanin concentrating hormone ISO RGD PMID:12964948 RGD:1642489 NCBI chr12:102,196,459...102,197,833
Ensembl chr12:102,196,459...102,197,833
JBrowse link
G UTS2 urotensin 2 involved_in ISO
IEA
RGD
Ensembl
PMID:15944374 GO_REF:0000107 RGD:2306844 NCBI chr 1:7,847,612...7,913,249
Ensembl chr 1:7,843,083...7,853,512
JBrowse link
G UTS2R urotensin 2 receptor ISO RGD PMID:15944374 RGD:2306844 NCBI chr17:82,371,765...82,377,458
Ensembl chr17:82,371,765...82,377,458
JBrowse link
positive regulation of circadian sleep/wake cycle, sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADORA2A adenosine A2a receptor involved_in IEA
ISO
in the sleep-promoting area of the lateral preoptic area of the brain Ensembl
Ensembl
RGD
PMID:16109808 GO_REF:0000107 RGD:1625234 NCBI chr22:24,423,597...24,442,357
Ensembl chr22:24,417,879...24,442,357
JBrowse link
G OPN4 opsin 4 acts_upstream_of_or_within ISO (MGI:5925970|PMID:26320947) MGI PMID:26320947 MGI:5925970 NCBI chr10:86,654,547...86,666,460
Ensembl chr10:86,654,518...86,666,460
JBrowse link
positive regulation of circadian sleep/wake cycle, wakefulness term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CRH corticotropin releasing hormone involved_in NAS (PMID:18329818) BHF-UCL
BHF-UCL
PMID:18329818 NCBI chr 8:66,176,376...66,178,464
Ensembl chr 8:66,176,376...66,178,464
JBrowse link
G NLGN1 neuroligin 1 involved_in ISS UniProt
UniProt
GO_REF:0000024 NCBI chr 3:173,395,952...174,294,372
Ensembl chr 3:173,396,284...174,294,372
JBrowse link
G NPS neuropeptide S involved_in IEA
ISO
Ensembl
Ensembl
RGD
PMID:22300983 GO_REF:0000107 RGD:9831203 NCBI chr10:127,549,309...127,553,540
Ensembl chr10:127,549,309...127,553,540
JBrowse link
G UTS2 urotensin 2 involved_in ISO
IEA
RGD
Ensembl
PMID:15944374 GO_REF:0000107 RGD:2306844 NCBI chr 1:7,847,612...7,913,249
Ensembl chr 1:7,843,083...7,853,512
JBrowse link
G UTS2R urotensin 2 receptor ISO RGD PMID:15944374 RGD:2306844 NCBI chr17:82,371,765...82,377,458
Ensembl chr17:82,371,765...82,377,458
JBrowse link
regulation of circadian sleep/wake cycle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NR1D1 nuclear receptor subfamily 1 group D member 1 involved_in ISS
IEA
UniProt
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr17:40,092,793...40,100,589
Ensembl chr17:40,092,793...40,100,589
JBrowse link
regulation of circadian sleep/wake cycle, non-REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CHRNB2 cholinergic receptor nicotinic beta 2 subunit acts_upstream_of_or_within ISO (MGI:3575072|PMID:15215293) MGI PMID:15215293 MGI:3575072 NCBI chr 1:154,567,778...154,580,013
Ensembl chr 1:154,567,778...154,580,013
JBrowse link
G IL6 interleukin 6 ISO RGD PMID:12667648 RGD:1358315 NCBI chr 7:22,727,200...22,731,998
Ensembl chr 7:22,725,884...22,732,002
JBrowse link
G KCNA2 potassium voltage-gated channel subfamily A member 2 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 1:110,593,580...110,631,440
Ensembl chr 1:110,519,837...110,631,474
JBrowse link
G PARP1 poly(ADP-ribose) polymerase 1 involved_in ISS UniProt GO_REF:0000024 NCBI chr 1:226,360,691...226,408,093
Ensembl chr 1:226,360,210...226,408,154
JBrowse link
regulation of circadian sleep/wake cycle, REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CHRNB2 cholinergic receptor nicotinic beta 2 subunit involved_in
acts_upstream_of_or_within
ISS
ISO
(MGI:3575072|PMID:15215293) UniProt
UniProt
MGI
PMID:15215293 GO_REF:0000024 MGI:3575072 NCBI chr 1:154,567,778...154,580,013
Ensembl chr 1:154,567,778...154,580,013
JBrowse link
regulation of circadian sleep/wake cycle, sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADA adenosine deaminase ISO RGD PMID:11038259 RGD:631747 NCBI chr20:44,619,522...44,651,699
Ensembl chr20:44,584,896...44,652,252
JBrowse link
G ADRB1 adrenoceptor beta 1 involved_in IMP
IEA
(PMID:25083013) UniProt
UniProt
Ensembl
PMID:25083013 GO_REF:0000107 NCBI chr10:114,043,866...114,046,904
Ensembl chr10:114,043,866...114,046,904
JBrowse link
G CORT cortistatin ISO RGD PMID:8622767 RGD:727760 NCBI chr 1:10,450,031...10,451,998
Ensembl chr 1:10,450,031...10,451,998
JBrowse link
G CSF2 colony stimulating factor 2 involved_in IEA
ISO
Ensembl
Ensembl
RGD
PMID:12047622 GO_REF:0000107 RGD:10449529 NCBI chr 5:132,073,789...132,076,170
Ensembl chr 5:132,073,789...132,076,170
JBrowse link
G DRD3 dopamine receptor D3 involved_in IEA
ISO
Ensembl
Ensembl
RGD
PMID:15913875 GO_REF:0000107 RGD:1625069 NCBI chr 3:114,127,580...114,199,407
Ensembl chr 3:114,127,580...114,199,407
JBrowse link
G NMU neuromedin U involved_in ISO PMID:20233222 UniProt PMID:20233222 RGD:12911001 NCBI chr 4:55,595,231...55,636,793
Ensembl chr 4:55,595,229...55,636,698
JBrowse link
G PER3 period circadian regulator 3 involved_in IMP
IEA
(PMID:17346965), (PMID:19716732), (PMID:24439663), (PMID:24577121), (PMID:26903630) UniProt
UniProt
Ensembl
PMID:17346965 PMID:19716732 PMID:24439663 PMID:24577121 PMID:26903630 GO_REF:0000107 NCBI chr 1:7,784,291...7,845,177
Ensembl chr 1:7,784,291...7,845,177
JBrowse link
G PGLYRP1 peptidoglycan recognition protein 1 ISO RGD PMID:11145837 RGD:724610 NCBI chr19:46,019,153...46,023,053
Ensembl chr19:46,019,153...46,023,053
JBrowse link
G PTGDS prostaglandin D2 synthase involved_in ISS
IEA
UniProt
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr 9:136,977,504...136,981,742
Ensembl chr 9:136,975,092...136,981,742
JBrowse link
regulation of circadian sleep/wake cycle, wakefulness term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HCRTR2 hypocretin receptor 2 involved_in ISS UniProt
UniProt
GO_REF:0000024 NCBI chr 6:55,106,469...55,284,713
Ensembl chr 6:55,106,460...55,282,617
JBrowse link
G PTGER3 prostaglandin E receptor 3 ISO RGD PMID:10923657 RGD:10043386 NCBI chr 1:70,852,358...71,047,816
Ensembl chr 1:70,852,353...71,047,816
JBrowse link
G PTGER4 prostaglandin E receptor 4 ISO RGD PMID:10923657 RGD:10043386 NCBI chr 5:40,679,915...40,746,800
Ensembl chr 5:40,679,915...40,693,735
JBrowse link
regulation of locomotor rhythm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MTOR mechanistic target of rapamycin kinase involved_in ISS
IEA
UniProt
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr 1:11,106,535...11,262,551
Ensembl chr 1:11,106,535...11,262,556
JBrowse link
G OPRL1 opioid related nociceptin receptor 1 involved_in IEA
ISO
Ensembl
RGD
Ensembl
PMID:16310969 GO_REF:0000107 RGD:9835023 NCBI chr20:64,080,082...64,100,643
Ensembl chr20:64,080,082...64,100,643
JBrowse link
G ZFHX3 zinc finger homeobox 3 involved_in ISS UniProt
UniProt
GO_REF:0000024 NCBI chr16:72,782,885...73,891,930
Ensembl chr16:72,782,885...73,891,871
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19751
    regulation of biological process 13156
      regulation of circadian rhythm 145
        entrainment of circadian clock + 39
        negative regulation of circadian rhythm + 21
        positive regulation of circadian rhythm + 30
        regulation of circadian sleep/wake cycle + 36
        regulation of locomotor rhythm + 4
        temperature compensation of the circadian clock 0
Path 2
Term Annotations click to browse term
  biological_process 19751
    rhythmic process 432
      circadian rhythm 286
        regulation of circadian rhythm 145
          entrainment of circadian clock + 39
          negative regulation of circadian rhythm + 21
          positive regulation of circadian rhythm + 30
          regulation of circadian sleep/wake cycle + 36
          regulation of locomotor rhythm + 4
          temperature compensation of the circadian clock 0
paths to the root