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ONTOLOGY REPORT - ANNOTATIONS

Term:regulation of circadian rhythm
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Accession:GO:0042752 term browser browse the term
Definition:Any process that modulates the frequency, rate or extent of a circadian rhythm. A circadian rhythm is a biological process in an organism that recurs with a regularity of approximately 24 hours.


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regulation of circadian rhythm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADCY1 adenylate cyclase 1 involved_in ISO (PMID:24048828) UniProt PMID:24048828 NCBI chr16:1,064,644...1,166,864
Ensembl chr16:1,037,162...1,167,094 		JBrowse link
G ATG7 autophagy related 7 involved_in ISO (PMID:29937374) UniProt PMID:29937374 NCBI chr20:6,916,354...7,154,849
Ensembl chr20:6,916,515...7,154,800 		JBrowse link
G BHLHE40 basic helix-loop-helix family member e40 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:12,641,872...12,647,519
Ensembl chr20:12,642,702...12,647,525 		JBrowse link
G BTRC beta-transducin repeat containing E3 ubiquitin protein ligase involved_in IEA Ensembl GO_REF:0000107 NCBI chr28:13,988,408...14,173,223
Ensembl chr28:13,988,432...14,169,581 		JBrowse link
G CCAR2 cell cycle and apoptosis regulator 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr25:34,660,026...34,674,129
Ensembl chr25:34,660,553...34,674,037 		JBrowse link
G CDK1 cyclin dependent kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:12,884,106...12,899,203
Ensembl chr 4:12,883,385...12,899,197 		JBrowse link
G CLOCK clock circadian regulator involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:47,684,409...47,825,733
Ensembl chr13:47,691,709...47,758,784 		JBrowse link
G CRY1 cryptochrome circadian regulator 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:31,681,098...31,792,995
Ensembl chr10:31,681,288...31,780,306 		JBrowse link
G CRY2 cryptochrome circadian regulator 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:43,538,335...43,573,651
Ensembl chr18:43,539,612...43,573,875 		JBrowse link
G CSNK1D casein kinase 1 delta involved_in IBA GO_Central GO_REF:0000033 NCBI chr 9:83,395...110,309
Ensembl chr 9:73,215...110,269 		JBrowse link
G CSNK1E casein kinase 1 epsilon involved_in ISO (PMID:21930935) UniProt PMID:21930935 NCBI chr10:26,386,646...26,412,429
Ensembl chr10:26,393,033...26,411,624 		JBrowse link
G DDB1 damage specific DNA binding protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:55,064,720...55,097,623
Ensembl chr18:55,064,729...55,097,627 		JBrowse link
G DRD4 dopamine receptor D4 involved_in IEA Ensembl GO_REF:0000107
G DRD4 dopamine receptor D4 involved_in IEA Ensembl GO_REF:0000107
G EZH2 enhancer of zeste 2 polycomb repressive complex 2 subunit involved_in ISO (PMID:16717091) UniProt PMID:16717091 NCBI chr16:1,926,443...1,991,995
Ensembl chr16:1,925,956...1,991,838 		JBrowse link
G FBXL3 F-box and leucine rich repeat protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr22:30,579,598...30,598,879
Ensembl chr22:30,581,474...30,598,886 		JBrowse link
G FBXW7 F-box and WD repeat domain containing 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:50,187,579...50,417,188
Ensembl chr15:50,189,240...50,417,195 		JBrowse link
G GSK3B glycogen synthase kinase 3 beta involved_in ISO (PMID:28556462) UniProt PMID:28556462 NCBI chr33:23,458,369...23,659,878
Ensembl chr33:23,463,767...23,659,666 		JBrowse link
G HDAC3 histone deacetylase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:36,583,283...36,598,121
Ensembl chr 2:36,583,283...36,597,682 		JBrowse link
G HNF4A hepatocyte nuclear factor 4 alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr24:31,847,864...31,908,337
Ensembl chr24:31,847,961...31,905,916 		JBrowse link
G HNRNPD heterogeneous nuclear ribonucleoprotein D involved_in IEA Ensembl GO_REF:0000107 NCBI chr32:6,323,444...6,341,238
Ensembl chr32:6,323,469...6,341,166 		JBrowse link
G ID2 inhibitor of DNA binding 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:5,956,924...5,958,833 JBrowse link
G KDM2A lysine demethylase 2A involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:50,178,511...50,294,097
Ensembl chr18:50,181,024...50,291,127 		JBrowse link
G KLF10 KLF transcription factor 10 involved_in ISO PMID:20070857 UniProt PMID:20070857 RGD:10047352 NCBI chr13:4,216,745...4,223,708
Ensembl chr13:4,218,084...4,223,691 		JBrowse link
G LOC102151783 inhibitor of DNA binding 2 involved_in ISO (PMID:19217292) UniProt PMID:19217292 NCBI chr10:54,954,852...54,957,116 JBrowse link
G MAGED1 MAGE family member D1 involved_in ISO (PMID:20300063) UniProt PMID:20300063 NCBI chr  X:44,395,091...44,458,705
Ensembl chr  X:44,395,015...44,458,705 		JBrowse link
G MAGEL2 MAGE family member L2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:36,362,021...36,366,326
Ensembl chr 3:36,363,930...36,365,870 		JBrowse link
G MAPK10 mitogen-activated protein kinase 10 involved_in ISO (PMID:22441692) UniProt PMID:22441692 NCBI chr32:9,584,437...9,889,118
Ensembl chr32:9,575,492...9,884,325 		JBrowse link
G MAPK8 mitogen-activated protein kinase 8 involved_in ISO (PMID:22441692) UniProt PMID:22441692 NCBI chr28:323,361...410,367
Ensembl chr28:368,513...406,401 		JBrowse link
G MAPK9 mitogen-activated protein kinase 9 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:1,443,528...1,480,501
Ensembl chr11:1,443,547...1,478,119 		JBrowse link
G MTOR mechanistic target of rapamycin kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:84,818,893...84,939,283
Ensembl chr 2:84,787,708...84,939,114 		JBrowse link
G NOCT nocturnin involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:3,587,769...3,612,184
Ensembl chr19:3,588,695...3,609,307 		JBrowse link
G NONO non-POU domain containing octamer binding involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:55,618,032...55,632,237
Ensembl chr  X:55,618,095...55,631,388 		JBrowse link
G NPAS2 neuronal PAS domain protein 2 involved_in ISO (PMID:24048828) UniProt PMID:24048828 NCBI chr10:41,846,766...42,005,058
Ensembl chr10:41,847,625...42,005,469 		JBrowse link
G NR1D1 nuclear receptor subfamily 1 group D member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:22,461,556...22,469,243
Ensembl chr 9:22,461,705...22,469,053 		JBrowse link
G NR1D2 nuclear receptor subfamily 1 group D member 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr23:19,758,907...19,787,725
Ensembl chr23:19,762,052...19,787,614 		JBrowse link
G OPN4 opsin 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:34,350,058...34,365,410
Ensembl chr 4:34,355,128...34,365,215 		JBrowse link
G PER1 period circadian regulator 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:32,957,517...32,972,368
Ensembl chr 5:32,957,127...32,968,465 		JBrowse link
G PER2 period circadian regulator 2 involved_in ISO (PMID:11395012), (PMID:19917250) UniProt PMID:11395012 PMID:19917250 NCBI chr25:48,716,499...48,761,617
Ensembl chr25:48,717,173...48,758,755 		JBrowse link
G PML PML nuclear body scaffold involved_in IEA Ensembl GO_REF:0000107 NCBI chr30:37,232,337...37,278,434
Ensembl chr30:37,232,306...37,277,741 		JBrowse link
G PPARA peroxisome proliferator activated receptor alpha involved_in ISS UniProt GO_REF:0000024 NCBI chr10:19,934,020...20,006,096
Ensembl chr10:19,934,165...20,006,146 		JBrowse link
G PPARG peroxisome proliferator activated receptor gamma involved_in ISS UniProt GO_REF:0000024 NCBI chr20:6,134,618...6,265,481
Ensembl chr20:6,050,357...6,207,981 		JBrowse link
G PPARGC1A PPARG coactivator 1 alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:85,645,942...86,284,570
Ensembl chr 3:86,016,140...86,281,269 		JBrowse link
G PPP1CA protein phosphatase 1 catalytic subunit alpha involved_in ISS UniProt GO_REF:0000024 NCBI chr18:50,062,352...50,065,166
Ensembl chr18:50,062,352...50,065,166 		JBrowse link
G PPP1CB protein phosphatase 1 catalytic subunit beta involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:22,680,691...22,699,999
Ensembl chr17:22,679,783...22,699,999 		JBrowse link
G PPP1CC protein phosphatase 1 catalytic subunit gamma involved_in ISO (PMID:21930935)
(PMID:21712997) 		UniProt PMID:21712997 PMID:21930935 NCBI chr26:8,497,350...8,518,467
Ensembl chr26:8,495,067...8,518,675 		JBrowse link
G PRKAA1 protein kinase AMP-activated catalytic subunit alpha 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:68,579,061...68,614,548
Ensembl chr 4:68,579,037...68,611,841 		JBrowse link
G PRKAA2 protein kinase AMP-activated catalytic subunit alpha 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:52,809,792...52,855,072
Ensembl chr 5:52,815,609...52,876,609 		JBrowse link
G PRKCG protein kinase C gamma involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:103,295,110...103,312,562 JBrowse link
G PRKDC protein kinase, DNA-activated, catalytic subunit involved_in ISS UniProt GO_REF:0000024 NCBI chr29:24,904...243,926
Ensembl chr29:35,007...243,895 		JBrowse link
G PROX1 prospero homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:11,996,282...12,047,693
Ensembl chr 7:11,996,703...12,044,036 		JBrowse link
G PSPC1 paraspeckle component 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr25:18,287,827...18,361,801
Ensembl chr25:18,287,899...18,359,553 		JBrowse link
G ROCK2 Rho associated coiled-coil containing protein kinase 2 involved_in ISO (PMID:23172836) UniProt PMID:23172836 NCBI chr17:7,931,786...8,012,484
Ensembl chr17:7,934,739...8,178,707 		JBrowse link
G RORA RAR related orphan receptor A involved_in IEA Ensembl GO_REF:0000107 NCBI chr30:25,315,974...26,026,708
Ensembl chr30:25,325,275...26,026,623 		JBrowse link
G RORB RAR related orphan receptor B involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:83,470,569...83,666,200
Ensembl chr 1:83,476,816...83,666,061 		JBrowse link
G SFPQ splicing factor proline and glutamine rich involved_in ISO (PMID:22966205) UniProt PMID:22966205 NCBI chr15:6,879,955...6,896,309
Ensembl chr15:6,880,065...6,888,004 		JBrowse link
G SIAH2 siah E3 ubiquitin protein ligase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr23:45,366,343...45,418,960
Ensembl chr23:45,341,199...45,385,546 		JBrowse link
G SIRT6 sirtuin 6 involved_in ISO (PMID:30782483) UniProt PMID:30782483 NCBI chr20:55,412,989...55,424,944
Ensembl chr20:55,412,646...55,424,944 		JBrowse link
G SPSB4 splA/ryanodine receptor domain and SOCS box containing 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr23:36,998,124...37,082,576
Ensembl chr23:36,997,705...37,077,401 		JBrowse link
G SRRD SRR1 domain containing involved_in ISO (PMID:28802827) UniProt PMID:28802827 NCBI chr26:20,172,236...20,186,236 JBrowse link
G TARDBP TAR DNA binding protein involved_in ISO (PMID:27123980) UniProt PMID:27123980 NCBI chr 2:84,987,752...84,998,136
Ensembl chr 2:84,989,952...84,998,593 		JBrowse link
G TIMELESS timeless circadian regulator involved_in ISO (PMID:23418588) UniProt PMID:23418588 NCBI chr10:671,829...701,152
Ensembl chr10:671,269...687,016 		JBrowse link
G TOP2A DNA topoisomerase II alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:22,207,501...22,237,497
Ensembl chr 9:22,207,638...22,237,496 		JBrowse link
G UBE3A ubiquitin protein ligase E3A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:35,347,034...35,442,329
Ensembl chr 3:35,347,064...35,440,256 		JBrowse link
G USP7 ubiquitin specific peptidase 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:33,277,328...33,315,601
Ensembl chr 6:33,277,444...33,314,491 		JBrowse link
G USP9X ubiquitin specific peptidase 9 X-linked involved_in ISO (PMID:29626158) UniProt PMID:29626158 NCBI chr  X:35,522,873...35,676,086 JBrowse link
entrainment of circadian clock term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATOH7 atonal bHLH transcription factor 7 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 4:19,466,476...19,479,279
Ensembl chr 4:19,478,694...19,479,152 		JBrowse link
G CHRM1 cholinergic receptor muscarinic 1 involved_in ISO (PMID:12196552) AgBase PMID:12196552 NCBI chr18:53,783,938...53,797,750
Ensembl chr18:53,795,326...53,796,708 		JBrowse link
G CLOCK clock circadian regulator ISO RGD PMID:10095082 RGD:632379 NCBI chr13:47,684,409...47,825,733
Ensembl chr13:47,691,709...47,758,784 		JBrowse link
G GNAQ G protein subunit alpha q involved_in ISS AgBase GO_REF:0000024 NCBI chr 1:80,733,530...80,928,065
Ensembl chr 1:80,715,366...80,928,065 		JBrowse link
G ID2 inhibitor of DNA binding 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr17:5,956,924...5,958,833 JBrowse link
G LOC102151783 inhibitor of DNA binding 2 acts_upstream_of_or_within ISO (PMID:19217292) MGI PMID:19217292 NCBI chr10:54,954,852...54,957,116 JBrowse link
G PHLPP1 PH domain and leucine rich repeat protein phosphatase 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:14,027,741...14,234,229
Ensembl chr 1:14,028,652...14,234,229 		JBrowse link
G SOX14 SRY-box transcription factor 14 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr23:34,079,534...34,081,598
Ensembl chr23:34,080,037...34,080,759 		JBrowse link
entrainment of circadian clock by photoperiod term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATOH7 atonal bHLH transcription factor 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:19,466,476...19,479,279
Ensembl chr 4:19,478,694...19,479,152 		JBrowse link
G BHLHE40 basic helix-loop-helix family member e40 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:12,641,872...12,647,519
Ensembl chr20:12,642,702...12,647,525 		JBrowse link
G CRTC1 CREB regulated transcription coactivator 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:44,315,021...44,394,385
Ensembl chr20:44,319,858...44,394,599 		JBrowse link
G CRY1 cryptochrome circadian regulator 1 involved_in IEA
IBA 		Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr10:31,681,098...31,792,995
Ensembl chr10:31,681,288...31,780,306 		JBrowse link
G CRY2 cryptochrome circadian regulator 2 involved_in IEA
IBA 		Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr18:43,538,335...43,573,651
Ensembl chr18:43,539,612...43,573,875 		JBrowse link
G FBXL21 F-box and leucine rich repeat protein 21 involved_in ISO (PMID:23452855), (PMID:23452856) UniProt PMID:23452855 PMID:23452856 NCBI chr11:23,846,512...23,859,141 JBrowse link
G FBXL3 F-box and leucine rich repeat protein 3 involved_in IEA
IBA 		Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr22:30,579,598...30,598,879
Ensembl chr22:30,581,474...30,598,886 		JBrowse link
G ID2 inhibitor of DNA binding 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:5,956,924...5,958,833 JBrowse link
G LOC102151783 inhibitor of DNA binding 2 involved_in ISO (PMID:19217292) UniProt PMID:19217292 NCBI chr10:54,954,852...54,957,116 JBrowse link
G MTA1 metastasis associated 1 involved_in ISO (PMID:24089055) UniProt PMID:24089055 NCBI chr 8:72,752,894...72,772,236
Ensembl chr 8:72,753,178...72,772,762 		JBrowse link
G NR2F6 nuclear receptor subfamily 2 group F member 6 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr20:45,490,113...45,500,606
Ensembl chr20:45,464,356...45,500,608 		JBrowse link
G OPN5 opsin 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:15,831,311...15,858,121
Ensembl chr12:15,831,311...15,877,721 		JBrowse link
G PDE6B phosphodiesterase 6B involved_in IEA
ISS 		Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:91,746,571...91,775,372
Ensembl chr 3:91,746,571...91,775,372 		JBrowse link
G PER1 period circadian regulator 1 involved_in IEA
IBA 		Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr 5:32,957,517...32,972,368
Ensembl chr 5:32,957,127...32,968,465 		JBrowse link
G PER2 period circadian regulator 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr25:48,716,499...48,761,617
Ensembl chr25:48,717,173...48,758,755 		JBrowse link
G PER3 period circadian regulator 3 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 5:61,445,580...61,499,393
Ensembl chr 5:61,445,461...61,498,499 		JBrowse link
G PML PML nuclear body scaffold involved_in IEA Ensembl GO_REF:0000107 NCBI chr30:37,232,337...37,278,434
Ensembl chr30:37,232,306...37,277,741 		JBrowse link
G PPP1CA protein phosphatase 1 catalytic subunit alpha involved_in ISS UniProt GO_REF:0000024 NCBI chr18:50,062,352...50,065,166
Ensembl chr18:50,062,352...50,065,166 		JBrowse link
G PPP1CB protein phosphatase 1 catalytic subunit beta involved_in ISO (PMID:21712997) UniProt PMID:21712997 NCBI chr17:22,680,691...22,699,999
Ensembl chr17:22,679,783...22,699,999 		JBrowse link
G PPP1CC protein phosphatase 1 catalytic subunit gamma involved_in ISO (PMID:21712997) UniProt PMID:21712997 NCBI chr26:8,497,350...8,518,467
Ensembl chr26:8,495,067...8,518,675 		JBrowse link
G RBM4B RNA binding motif protein 4B involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:50,676,138...50,686,061
Ensembl chr18:50,676,162...50,685,573 		JBrowse link
G SIK1 salt inducible kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr31:37,455,130...37,466,829 JBrowse link
G TP53 tumor protein p53 involved_in ISS
IEA 		UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr 5:32,561,406...32,565,149
Ensembl chr 5:32,560,598...32,574,109 		JBrowse link
G USP2 ubiquitin specific peptidase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:14,525,685...14,550,914
Ensembl chr 5:14,525,797...14,549,291 		JBrowse link
negative regulation of circadian rhythm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CIPC CLOCK interacting pacemaker involved_in IEA InterPro
Ensembl		 GO_REF:0000002 GO_REF:0000107 NCBI chr 8:49,926,494...49,947,006
Ensembl chr 8:49,926,978...49,945,326 		JBrowse link
G CRY1 cryptochrome circadian regulator 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:31,681,098...31,792,995
Ensembl chr10:31,681,288...31,780,306 		JBrowse link
G CRY2 cryptochrome circadian regulator 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:43,538,335...43,573,651
Ensembl chr18:43,539,612...43,573,875 		JBrowse link
G PASD1 PAS domain containing repressor 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr  X:119,536,333...119,629,452
Ensembl chr  X:119,536,268...119,629,451 		JBrowse link
G PER2 period circadian regulator 2 involved_in ISO (PMID:19605937) UniProt PMID:19605937 NCBI chr25:48,716,499...48,761,617
Ensembl chr25:48,717,173...48,758,755 		JBrowse link
G PIWIL2 piwi like RNA-mediated gene silencing 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr25:34,911,120...34,987,287
Ensembl chr25:34,912,358...34,987,339 		JBrowse link
G SFPQ splicing factor proline and glutamine rich involved_in ISO (PMID:21680841) UniProt PMID:21680841 NCBI chr15:6,879,955...6,896,309
Ensembl chr15:6,880,065...6,888,004 		JBrowse link
G SIN3A SIN3 transcription regulator family member A involved_in IEA Ensembl GO_REF:0000107 NCBI chr30:38,231,844...38,306,665
Ensembl chr30:38,232,680...38,382,635 		JBrowse link
negative regulation of circadian sleep/wake cycle, non-REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADA adenosine deaminase ISO RGD PMID:19066225 RGD:5128864 NCBI chr24:32,083,786...32,119,810
Ensembl chr24:32,083,931...32,111,160 		JBrowse link
G ADORA1 adenosine A1 receptor ISO RGD PMID:19491711 RGD:2317916 NCBI chr 7:44,819...74,217
Ensembl chr 7:44,820...73,051 		JBrowse link
negative regulation of circadian sleep/wake cycle, REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GHRL ghrelin and obestatin prepropeptide involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:8,092,921...8,097,512
Ensembl chr20:8,092,957...8,097,510 		JBrowse link
negative regulation of circadian sleep/wake cycle, sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADORA1 adenosine A1 receptor ISO in the sleep-promoting area of the lateral preoptic area of the brain RGD PMID:16109808 RGD:1625234 NCBI chr 7:44,819...74,217
Ensembl chr 7:44,820...73,051 		JBrowse link
G DRD1 dopamine receptor D1 ISO RGD PMID:12944496 RGD:1581422 NCBI chr 4:37,550,454...37,554,641
Ensembl chr 4:37,549,708...37,553,287 		JBrowse link
G DRD2 dopamine receptor D2 ISO RGD PMID:12944496 RGD:1581422 NCBI chr 5:19,732,842...19,795,241
Ensembl chr 5:19,732,836...19,795,241 		JBrowse link
negative regulation of circadian sleep/wake cycle, wakefulness term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PTGER3 prostaglandin E receptor 3 ISO RGD PMID:10923657 RGD:10043386 NCBI chr 6:74,932,789...74,986,573 JBrowse link
negative regulation of locomotor rhythm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LEPR leptin receptor ISO RGD PMID:16982424 RGD:10412019 NCBI chr 5:44,684,118...44,775,626
Ensembl chr 5:44,688,109...44,775,636 		JBrowse link
positive regulation of circadian rhythm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARNTL aryl hydrocarbon receptor nuclear translocator like involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:36,254,235...36,323,915
Ensembl chr21:36,290,070...36,323,622 		JBrowse link
G ARNTL2 aryl hydrocarbon receptor nuclear translocator like 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr27:20,304,404...20,420,086
Ensembl chr27:20,306,705...20,420,736 		JBrowse link
G BTRC beta-transducin repeat containing E3 ubiquitin protein ligase involved_in IEA Ensembl GO_REF:0000107 NCBI chr28:13,988,408...14,173,223
Ensembl chr28:13,988,432...14,169,581 		JBrowse link
G CLOCK clock circadian regulator involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:47,684,409...47,825,733
Ensembl chr13:47,691,709...47,758,784 		JBrowse link
G FBXW11 F-box and WD repeat domain containing 11 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:40,238,695...40,363,445
Ensembl chr 4:40,238,737...40,361,125 		JBrowse link
G KAT5 lysine acetyltransferase 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:51,499,615...51,507,434
Ensembl chr18:51,499,938...51,576,699 		JBrowse link
G MTNR1B melatonin receptor 1B ISO RGD PMID:12643943 RGD:9588678 NCBI chr21:7,639,532...7,643,534
Ensembl chr21:7,640,317...7,641,498 		JBrowse link
G NKX2-1 NK2 homeobox 1 involved_in IEA Ensembl GO_REF:0000107
G NR1D1 nuclear receptor subfamily 1 group D member 1 ISO RGD PMID:18946026 RGD:10448985 NCBI chr 9:22,461,556...22,469,243
Ensembl chr 9:22,461,705...22,469,053 		JBrowse link
G PRKG1 protein kinase cGMP-dependent 1 ISO RGD PMID:12930792 RGD:7777105 NCBI chr26:35,732,974...36,932,744
Ensembl chr26:35,737,242...36,932,729 		JBrowse link
G RORA RAR related orphan receptor A involved_in IEA Ensembl GO_REF:0000107 NCBI chr30:25,315,974...26,026,708
Ensembl chr30:25,325,275...26,026,623 		JBrowse link
G RORC RAR related orphan receptor C involved_in ISO (PMID:22753030) UniProt PMID:22753030 NCBI chr17:60,821,498...60,842,485
Ensembl chr17:60,821,981...60,842,453 		JBrowse link
G THRAP3 thyroid hormone receptor associated protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:5,955,469...6,022,442
Ensembl chr15:5,956,316...6,021,875 		JBrowse link
G TIMELESS timeless circadian regulator ISO RGD PMID:14564007 RGD:734503 NCBI chr10:671,829...701,152
Ensembl chr10:671,269...687,016 		JBrowse link
positive regulation of circadian sleep/wake cycle, non-REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALB albumin ISO RGD PMID:9748091 RGD:1625449 NCBI chr13:62,133,747...62,169,349
Ensembl chr13:62,053,814...62,294,709 		JBrowse link
G GHRH growth hormone releasing hormone ISO RGD PMID:19889861 PMID:20237285 RGD:10401262 RGD:2325188 NCBI chr24:25,893,224...25,902,095
Ensembl chr24:25,893,225...25,897,712 		JBrowse link
G GHRHR growth hormone releasing hormone receptor ISO RGD PMID:20237285 RGD:10401262 NCBI chr14:43,626,862...43,638,737
Ensembl chr14:43,626,845...43,638,753 		JBrowse link
G GHRL ghrelin and obestatin prepropeptide involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:8,092,921...8,097,512
Ensembl chr20:8,092,957...8,097,510 		JBrowse link
G MTNR1B melatonin receptor 1B ISO RGD PMID:19429170 PMID:22171046 RGD:9588660 RGD:9588665 NCBI chr21:7,639,532...7,643,534
Ensembl chr21:7,640,317...7,641,498 		JBrowse link
G NPY2R neuropeptide Y receptor Y2 ISO RGD PMID:16378653 RGD:1642507 NCBI chr15:52,790,136...52,797,785
Ensembl chr15:52,794,671...52,795,818 		JBrowse link
G PTGER3 prostaglandin E receptor 3 ISO RGD PMID:10923657 RGD:10043386 NCBI chr 6:74,932,789...74,986,573 JBrowse link
G PTGER4 prostaglandin E receptor 4 ISO RGD PMID:10923657 RGD:10043386 NCBI chr 4:68,663,362...68,676,241
Ensembl chr 4:68,663,364...68,676,358 		JBrowse link
positive regulation of circadian sleep/wake cycle, REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GHRH growth hormone releasing hormone NOT|involved_in ISO (PMID:15538933) BHF-UCL PMID:15538933 NCBI chr24:25,893,224...25,902,095
Ensembl chr24:25,893,225...25,897,712 		JBrowse link
G PMCH pro-melanin concentrating hormone ISO RGD PMID:12964948 RGD:1642489 NCBI chr15:41,036,428...41,037,571
Ensembl chr15:41,036,428...41,037,553 		JBrowse link
G UTS2 urotensin 2 ISO RGD PMID:15944374 RGD:2306844 NCBI chr 5:61,503,268...61,508,146 JBrowse link
G UTS2R urotensin 2 receptor ISO RGD PMID:15944374 RGD:2306844
positive regulation of circadian sleep/wake cycle, sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADORA2A adenosine A2a receptor ISO in the sleep-promoting area of the lateral preoptic area of the brain RGD PMID:16109808 RGD:1625234 NCBI chr26:28,141,076...28,150,600
Ensembl chr26:28,141,076...28,150,598 		JBrowse link
positive regulation of circadian sleep/wake cycle, wakefulness term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NLGN1 neuroligin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr34:37,397,772...38,203,634
Ensembl chr34:37,572,629...38,203,177 		JBrowse link
G NPS neuropeptide S ISO RGD PMID:22300983 RGD:9831203 NCBI chr28:36,488,430...36,492,524
Ensembl chr28:36,488,500...36,492,090 		JBrowse link
G UTS2 urotensin 2 ISO RGD PMID:15944374 RGD:2306844 NCBI chr 5:61,503,268...61,508,146 JBrowse link
G UTS2R urotensin 2 receptor ISO RGD PMID:15944374 RGD:2306844
regulation of circadian sleep/wake cycle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NR1D1 nuclear receptor subfamily 1 group D member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:22,461,556...22,469,243
Ensembl chr 9:22,461,705...22,469,053 		JBrowse link
regulation of circadian sleep/wake cycle, non-REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CARTPT CART prepropeptide ISO RGD PMID:20116848 RGD:597811019 NCBI chr 2:54,865,043...54,867,410
Ensembl chr 2:54,865,298...54,867,158 		JBrowse link
G CHRNB2 cholinergic receptor nicotinic beta 2 subunit acts_upstream_of_or_within ISO (PMID:15215293) MGI PMID:15215293 NCBI chr 7:42,786,505...42,797,976
Ensembl chr 7:42,789,600...42,795,722 		JBrowse link
G IL6 interleukin 6 ISO RGD PMID:12667648 RGD:1358315 NCBI chr14:36,474,268...36,478,519
Ensembl chr14:36,473,394...36,478,519 		JBrowse link
G KCNA2 potassium voltage-gated channel subfamily A member 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:41,405,453...41,415,727
Ensembl chr 6:41,407,070...41,408,823 		JBrowse link
G PARP1 poly(ADP-ribose) polymerase 1 involved_in ISO (PMID:34798058) UniProt PMID:34798058 NCBI chr 7:38,503,072...38,542,556
Ensembl chr 7:38,503,067...38,542,127 		JBrowse link
regulation of circadian sleep/wake cycle, REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CARTPT CART prepropeptide ISO RGD PMID:20116848 RGD:597811019 NCBI chr 2:54,865,043...54,867,410
Ensembl chr 2:54,865,298...54,867,158 		JBrowse link
G CHRNB2 cholinergic receptor nicotinic beta 2 subunit acts_upstream_of_or_within ISO (PMID:15215293) MGI PMID:15215293 NCBI chr 7:42,786,505...42,797,976
Ensembl chr 7:42,789,600...42,795,722 		JBrowse link
regulation of circadian sleep/wake cycle, sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADA adenosine deaminase ISO RGD PMID:11038259 RGD:631747 NCBI chr24:32,083,786...32,119,810
Ensembl chr24:32,083,931...32,111,160 		JBrowse link
G ADRB1 adrenoceptor beta 1 involved_in ISS UniProt GO_REF:0000024 NCBI chr28:24,908,224...24,909,684
Ensembl chr28:24,908,224...24,909,684 		JBrowse link
G CSF2 colony stimulating factor 2 ISO RGD PMID:12047622 RGD:10449529 NCBI chr11:20,342,880...20,346,959
Ensembl chr11:20,344,648...20,346,959 		JBrowse link
G DRD3 dopamine receptor D3 ISO RGD PMID:15913875 RGD:1625069 NCBI chr33:18,369,362...18,414,465
Ensembl chr33:18,372,865...18,412,277 		JBrowse link
G FXR1 FMR1 autosomal homolog 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr34:14,129,978...14,192,016
Ensembl chr34:14,130,017...14,191,370 		JBrowse link
G LOC611347 uncharacterized LOC611347 involved_in ISO PMID:20233222 UniProt PMID:20233222 RGD:12911001 NCBI chr13:47,865,037...48,047,697
Ensembl chr13:47,865,002...47,893,921 		JBrowse link
G PER3 period circadian regulator 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:61,445,580...61,499,393
Ensembl chr 5:61,445,461...61,498,499 		JBrowse link
G PGLYRP1 peptidoglycan recognition protein 1 ISO RGD PMID:11145837 RGD:724610 NCBI chr 1:109,614,404...109,618,242
Ensembl chr 1:109,614,437...109,618,242 		JBrowse link
G PTGDS prostaglandin D2 synthase involved_in ISS
IEA 		UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr 9:48,647,334...48,650,608
Ensembl chr 9:48,646,255...48,669,814 		JBrowse link
regulation of circadian sleep/wake cycle, wakefulness term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CARTPT CART prepropeptide ISO RGD PMID:20116848 RGD:597811019 NCBI chr 2:54,865,043...54,867,410
Ensembl chr 2:54,865,298...54,867,158 		JBrowse link
G HCRTR2 hypocretin receptor 2 involved_in IMP (PMID:11282968) UniProt PMID:11282968 NCBI chr12:22,517,482...22,623,358
Ensembl chr12:22,517,482...22,623,358 		JBrowse link
G PTGER3 prostaglandin E receptor 3 ISO RGD PMID:10923657 RGD:10043386 NCBI chr 6:74,932,789...74,986,573 JBrowse link
G PTGER4 prostaglandin E receptor 4 ISO RGD PMID:10923657 RGD:10043386 NCBI chr 4:68,663,362...68,676,241
Ensembl chr 4:68,663,364...68,676,358 		JBrowse link
regulation of locomotor rhythm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MTOR mechanistic target of rapamycin kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:84,818,893...84,939,283
Ensembl chr 2:84,787,708...84,939,114 		JBrowse link
G OPRL1 opioid related nociceptin receptor 1 ISO RGD PMID:16310969 RGD:9835023 NCBI chr24:47,530,039...47,537,477
Ensembl chr24:47,508,136...47,537,250 		JBrowse link
G ZFHX3 zinc finger homeobox 3 involved_in ISO (PMID:26232227) UniProt PMID:26232227 NCBI chr 5:78,450,963...78,635,615
Ensembl chr 5:78,455,005...78,610,033 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 22130
    regulation of biological process 12180
      regulation of circadian rhythm 128
        entrainment of circadian clock + 29
        negative regulation of circadian rhythm + 15
        positive regulation of circadian rhythm + 27
        regulation of circadian sleep/wake cycle + 33
        regulation of locomotor rhythm + 4
        temperature compensation of the circadian clock 0
Path 2
Term Annotations click to browse term
  biological_process 22130
    rhythmic process 410
      circadian rhythm 278
        regulation of circadian rhythm 128
          entrainment of circadian clock + 29
          negative regulation of circadian rhythm + 15
          positive regulation of circadian rhythm + 27
          regulation of circadian sleep/wake cycle + 33
          regulation of locomotor rhythm + 4
          temperature compensation of the circadian clock 0
paths to the root