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ONTOLOGY REPORT - ANNOTATIONS


Term:regulation of circadian rhythm
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Accession:GO:0042752 term browser browse the term
Definition:Any process that modulates the frequency, rate or extent of a circadian rhythm. A circadian rhythm is a biological process in an organism that recurs with a regularity of approximately 24 hours.



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regulation of circadian rhythm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adcy1 adenylate cyclase 1 involved_in ISO (MGI:5518489|PMID:24048828) RGD PMID:24048828 MGI:5518489 NCBI chr14:81,911,240...82,020,594
Ensembl chr14:81,911,099...82,028,969
JBrowse link
G Atg7 autophagy related 7 involved_in ISS
ISO
GO_REF:0000024
(MGI:6208175|PMID:29937374)
UniProt
RGD
PMID:29937374 GO_REF:0000024 MGI:6208175 NCBI chr 4:147,718,663...147,925,656
Ensembl chr 4:147,718,752...147,925,593
JBrowse link
G Bhlhe40 basic helix-loop-helix family, member e40 involved_in ISS
ISO
GO_REF:0000024
(MGI:6282958|PMID:30012868)
UniProt
RGD
PMID:30012868 GO_REF:0000024 MGI:6282958 NCBI chr 4:141,618,453...141,624,154
Ensembl chr 4:141,618,476...141,624,774
JBrowse link
G Btrc beta-transducin repeat containing E3 ubiquitin protein ligase involved_in ISO (PMID:15917222) RGD PMID:15917222 NCBI chr 1:244,210,299...244,380,126
Ensembl chr 1:244,210,314...244,376,721
JBrowse link
G Ccar2 cell cycle and apoptosis regulator 2 involved_in ISO (MGI:5495335|PMID:23398316) RGD PMID:23398316 MGI:5495335 NCBI chr15:45,212,797...45,228,001
Ensembl chr15:45,212,803...45,227,636
JBrowse link
G Cdk1 cyclin-dependent kinase 1 involved_in ISO
ISS
(PMID:27238018)
GO_REF:0000024
RGD
UniProt
PMID:27238018 GO_REF:0000024 NCBI chr20:19,266,226...19,281,417
Ensembl chr20:19,266,248...19,281,408
JBrowse link
G Clock clock circadian regulator involved_in ISS
ISO
IEA
GO_REF:0000024
(MGI:6282958|PMID:30012868)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:30012868 GO_REF:0000024 GO_REF:0000107 MGI:6282958 NCBI chr14:31,908,542...31,992,673
Ensembl chr14:31,908,566...31,990,400
JBrowse link
G Creb1 cAMP responsive element binding protein 1 IMP RGD PMID:12409294 RGD:633667 NCBI chr 9:65,903,511...65,972,562
Ensembl chr 9:65,903,547...65,970,816
JBrowse link
G Crem cAMP responsive element modulator IEP RGD PMID:15936880 RGD:1582464 NCBI chr17:54,238,889...54,305,989
Ensembl chr17:54,239,030...54,305,989
JBrowse link
G Cry1 cryptochrome circadian regulator 1 involved_in ISS
ISO
GO_REF:0000024
UniProtKB:Q9R194 (MGI:1334825|PMID:10217146), (MGI:4366197|PMID:19833968), (MGI:4947326|PMID:21236481), (MGI:5490394|PMID:23616524), (MGI:5567898|PMID:23575670), (MGI:5908518|PMID:26431207)
UniProt
RGD
PMID:10217146 PMID:19833968 PMID:21236481 PMID:23575670 PMID:23616524 More... GO_REF:0000024 MGI:1334825 MGI:4366197 MGI:4947326 MGI:5490394 MGI:5567898 MGI:5908518 NCBI chr 7:18,529,823...18,594,092
Ensembl chr 7:18,529,823...18,594,091
JBrowse link
G Cry2 cryptochrome circadian regulator 2 involved_in ISS
ISO
GO_REF:0000024
UniProtKB:P97784 (MGI:1334825|PMID:10217146), (MGI:5490394|PMID:23616524), (MGI:5567898|PMID:23575670)
UniProt
RGD
PMID:10217146 PMID:23575670 PMID:23616524 GO_REF:0000024 MGI:1334825 MGI:5490394 MGI:5567898 NCBI chr 3:78,374,995...78,405,001
Ensembl chr 3:78,374,995...78,404,965
JBrowse link
G Csnk1d casein kinase 1, delta involved_in ISS
ISO
IBA
GO_REF:0000024
(MGI:3849793|PMID:19414593), (MGI:5294280|PMID:21930935)
PMID:21873635
UniProt
RGD
PMID:19414593 PMID:21930935 PMID:21873635 GO_REF:0000024 MGI:3849793 MGI:5294280, RGD:13792537 NCBI chr10:106,221,992...106,256,620
Ensembl chr10:106,221,992...106,256,614
JBrowse link
G Csnk1e casein kinase 1, epsilon involved_in ISO (MGI:5294280|PMID:21930935) RGD PMID:21930935 MGI:5294280 NCBI chr 7:110,983,322...111,006,926
Ensembl chr 7:110,983,318...111,006,794
JBrowse link
G Ddb1 damage-specific DNA binding protein 1 involved_in ISS
ISO
IEA
GO_REF:0000024
(MGI:5908518|PMID:26431207)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:26431207 GO_REF:0000024 GO_REF:0000107 MGI:5908518 NCBI chr 1:207,252,890...207,278,685
Ensembl chr 1:207,252,890...207,278,676
JBrowse link
G Drd4 dopamine receptor D4 involved_in ISS
ISO
IEA
GO_REF:0000024
(MGI:5518489|PMID:24048828)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:24048828 GO_REF:0000024 GO_REF:0000107 MGI:5518489 NCBI chr 1:196,396,366...196,400,824
Ensembl chr 1:196,396,366...196,399,553
JBrowse link
G Ezh2 enhancer of zeste 2 polycomb repressive complex 2 subunit involved_in ISO (PMID:16717091)
(MGI:3694308|PMID:16717091)
RGD PMID:16717091 MGI:3694308 NCBI chr 4:76,624,399...76,687,362
Ensembl chr 4:76,624,399...76,687,362
JBrowse link
G Fbxl3 F-box and leucine-rich repeat protein 3 involved_in ISO (PMID:17463251)
(MGI:3710694|PMID:17463252), (MGI:3715674|PMID:17462724), (MGI:5490394|PMID:23616524)
RGD PMID:17462724 PMID:17463251 PMID:17463252 PMID:23616524 MGI:3710694 MGI:3715674 MGI:5490394 NCBI chr15:79,906,795...79,926,678
Ensembl chr15:79,906,795...79,927,867
JBrowse link
G Fbxw7 F-box and WD repeat domain containing 7 involved_in ISS
ISO
GO_REF:0000024
(MGI:6282935|PMID:27238018)
(PMID:27238018)
UniProt
RGD
PMID:27238018 GO_REF:0000024 MGI:6282935 NCBI chr 2:170,150,552...170,310,698
Ensembl chr 2:170,149,694...170,309,941
JBrowse link
G Gsk3b glycogen synthase kinase 3 beta involved_in ISS
ISO
GO_REF:0000024
(MGI:6294161|PMID:28556462)
UniProt
RGD
PMID:28556462 GO_REF:0000024 MGI:6294161 NCBI chr11:62,498,997...62,648,665
Ensembl chr11:62,504,316...62,648,646
JBrowse link
G Hdac3 histone deacetylase 3 involved_in ISS
ISO
GO_REF:0000024
(MGI:5882311|PMID:26776516)
UniProt
RGD
PMID:26776516 GO_REF:0000024 MGI:5882311 NCBI chr18:29,770,637...29,789,850
Ensembl chr18:29,770,636...29,793,856
JBrowse link
G Hnf4a hepatocyte nuclear factor 4, alpha involved_in ISO
ISS
IEA
(PMID:30530698)
(MGI:6272229|PMID:30530698)
GO_REF:0000024
GO_REF:0000107
RGD
UniProt
Ensembl
PMID:30530698 GO_REF:0000024 GO_REF:0000107 MGI:6272229 NCBI chr 3:152,186,787...152,248,320
Ensembl chr 3:152,186,787...152,248,320
JBrowse link
G Hnrnpd heterogeneous nuclear ribonucleoprotein D involved_in ISO
ISS
(PMID:24423872)
GO_REF:0000024
RGD
UniProt
PMID:24423872 GO_REF:0000024 NCBI chr14:9,615,375...9,638,975
Ensembl chr14:9,615,479...9,633,786
JBrowse link
G Id2 inhibitor of DNA binding 2 involved_in ISS
ISO
GO_REF:0000024
(MGI:3838062|PMID:19217292)
UniProt
RGD
PMID:19217292 GO_REF:0000024 MGI:3838062 NCBI chr 6:41,740,556...41,742,393
Ensembl chr 6:41,728,946...41,744,400
JBrowse link
G Kdm2a lysine demethylase 2A involved_in ISO (PMID:26037310) RGD PMID:26037310 NCBI chr 1:201,612,427...201,682,359
Ensembl chr 1:201,612,453...201,680,787
JBrowse link
G Klf10 Kruppel-like factor 10 involved_in IMP PMID:20070857 UniProt PMID:20070857 RGD:10047352 NCBI chr 7:69,467,658...69,473,726
Ensembl chr 7:69,465,619...69,473,994
JBrowse link
G Maged1 MAGE family member D1 involved_in ISO (MGI:5508569|PMID:20300063) RGD PMID:20300063 MGI:5508569 NCBI chr  X:59,422,715...59,429,381
Ensembl chr  X:59,422,717...59,429,364
JBrowse link
G Magel2 MAGE family member L2 involved_in ISO (MGI:5607219|PMID:22208286) RGD PMID:22208286 MGI:5607219 NCBI chr 1:115,880,137...115,884,680
Ensembl chr 1:115,880,474...115,884,250
JBrowse link
G Mapk10 mitogen activated protein kinase 10 involved_in ISS
ISO
GO_REF:0000024
(MGI:5431019|PMID:22441692)
UniProt
RGD
PMID:22441692 GO_REF:0000024 MGI:5431019 NCBI chr14:6,497,662...6,790,109
Ensembl chr14:6,497,707...6,786,201
JBrowse link
G Mapk8 mitogen-activated protein kinase 8 involved_in ISS
ISO
GO_REF:0000024
(MGI:5431019|PMID:22441692)
UniProt
RGD
PMID:22441692 GO_REF:0000024 MGI:5431019 NCBI chr16:8,638,897...8,721,960
Ensembl chr16:8,638,924...8,721,981
JBrowse link
G Mapk9 mitogen-activated protein kinase 9 involved_in IEA
ISO
ISS
GO_REF:0000107
(MGI:5431019|PMID:22441692)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:22441692 GO_REF:0000024 GO_REF:0000107 MGI:5431019 NCBI chr10:34,169,661...34,211,138
Ensembl chr10:34,169,675...34,210,178
JBrowse link
G Mtor mechanistic target of rapamycin kinase involved_in ISS
ISO
GO_REF:0000024
(MGI:6159528|PMID:29750810)
UniProt
RGD
PMID:29750810 GO_REF:0000024 MGI:6159528 NCBI chr 5:158,884,856...158,994,311
Ensembl chr 5:158,884,804...158,994,311
JBrowse link
G Noct nocturnin involved_in ISS
ISO
GO_REF:0000024
(MGI:5308514|PMID:22073225)
UniProt
RGD
PMID:22073225 GO_REF:0000024 MGI:5308514 NCBI chr 2:135,271,189...135,291,407
Ensembl chr 2:135,271,189...135,291,400
JBrowse link
G Nono non-POU domain containing, octamer-binding involved_in ISS
ISO
GO_REF:0000024
(MGI:5444785|PMID:22966205)
UniProt
RGD
PMID:22966205 GO_REF:0000024 MGI:5444785 NCBI chr  X:66,554,131...66,571,992
Ensembl chr  X:66,554,098...66,571,952
JBrowse link
G Npas2 neuronal PAS domain protein 2 involved_in ISO (MGI:5518489|PMID:24048828) RGD PMID:24048828 MGI:5518489 NCBI chr 9:41,463,361...41,642,322
Ensembl chr 9:41,463,830...41,642,320
JBrowse link
G Nr1d1 nuclear receptor subfamily 1, group D, member 1 involved_in IDA
ISO
PMID:22425774
(MGI:4360821|PMID:19721697), (MGI:4429726|PMID:20159955), (MGI:6162161|PMID:29533925)
RGD PMID:19721697 PMID:20159955 PMID:29533925 PMID:22425774 MGI:4360821 MGI:4429726 MGI:6162161, RGD:8553819 NCBI chr10:83,728,348...83,735,562
Ensembl chr10:83,728,318...83,735,705
JBrowse link
G Nr1d2 nuclear receptor subfamily 1, group D, member 2 involved_in ISS
ISO
GO_REF:0000024
(MGI:5526909|PMID:23221024), (MGI:6162161|PMID:29533925)
UniProt
RGD
PMID:23221024 PMID:29533925 GO_REF:0000024 MGI:5526909 MGI:6162161 NCBI chr15:7,524,257...7,550,553
Ensembl chr15:7,524,257...7,550,553
JBrowse link
G Opn4 opsin 4 involved_in ISS
ISO
GO_REF:0000024
(MGI:2667269|PMID:12808468)
UniProt
RGD
PMID:12808468 GO_REF:0000024 MGI:2667269 NCBI chr16:9,920,408...9,929,580
Ensembl chr16:9,920,491...10,005,711
JBrowse link
G Per1 period circadian regulator 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:1935010|PMID:11395012)
UniProt
RGD
PMID:11395012 GO_REF:0000024 MGI:1935010 NCBI chr10:53,800,126...53,814,963
Ensembl chr10:53,805,535...53,814,431
JBrowse link
G Per2 period circadian regulator 2 involved_in ISS
ISO
GO_REF:0000024
(MGI:1935010|PMID:11395012), (MGI:4410390|PMID:19917250)
UniProt
RGD
PMID:11395012 PMID:19917250 GO_REF:0000024 MGI:1935010 MGI:4410390 NCBI chr 9:92,007,289...92,049,551
Ensembl chr 9:92,007,296...92,049,459
JBrowse link
G Pml PML nuclear body scaffold involved_in ISO (MGI:5314433|PMID:22274616) RGD PMID:22274616 MGI:5314433 NCBI chr 8:58,627,347...58,661,927
Ensembl chr 8:58,628,837...58,658,971
JBrowse link
G Ppara peroxisome proliferator activated receptor alpha involved_in ISS
ISO
GO_REF:0000024
(MGI:4429726|PMID:20159955)
UniProt
RGD
PMID:20159955 GO_REF:0000024 MGI:4429726 NCBI chr 7:116,832,405...116,900,878
Ensembl chr 7:116,832,756...116,895,346
JBrowse link
G Pparg peroxisome proliferator-activated receptor gamma involved_in ISS
ISO
GO_REF:0000024
(MGI:3830801|PMID:19041764)
UniProt
RGD
PMID:19041764 GO_REF:0000024 MGI:3830801 NCBI chr 4:148,423,102...148,548,471
Ensembl chr 4:148,423,194...148,548,468
JBrowse link
G Ppargc1a PPARG coactivator 1 alpha involved_in ISS
ISO
GO_REF:0000024
(MGI:3715412|PMID:17476214)
UniProt
RGD
PMID:17476214 GO_REF:0000024 MGI:3715412 NCBI chr14:58,860,752...59,516,525
Ensembl chr14:58,861,144...59,512,656
JBrowse link
G Ppp1ca protein phosphatase 1 catalytic subunit alpha involved_in ISO
ISS
(PMID:21712997)
(MGI:5086036|PMID:21712997), (MGI:5294280|PMID:21930935)
GO_REF:0000024
RGD
UniProt
PMID:21712997 PMID:21930935 GO_REF:0000024 MGI:5086036 MGI:5294280 NCBI chr 1:201,485,117...201,488,734
Ensembl chr 1:201,485,085...201,497,327
JBrowse link
G Ppp1cb protein phosphatase 1 catalytic subunit beta involved_in IBA
ISO
ISS
PMID:21873635
(MGI:5086036|PMID:21712997), (MGI:5294280|PMID:21930935)
GO_REF:0000024
(PMID:21712997)
RGD
UniProt
PMID:21712997 PMID:21930935 PMID:21873635 GO_REF:0000024 MGI:5086036 MGI:5294280, RGD:13792537 NCBI chr 6:23,958,813...23,992,841
Ensembl chr 6:23,960,998...23,992,824
JBrowse link
G Ppp1cc protein phosphatase 1 catalytic subunit gamma involved_in ISS
ISO
GO_REF:0000024
(MGI:5086036|PMID:21712997), (MGI:5294280|PMID:21930935)
(PMID:21712997)
UniProt
RGD
PMID:21712997 PMID:21930935 GO_REF:0000024 MGI:5086036 MGI:5294280 NCBI chr12:34,383,072...34,400,553
Ensembl chr12:34,383,072...34,400,553
JBrowse link
G Prkaa1 protein kinase AMP-activated catalytic subunit alpha 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:4366197|PMID:19833968)
UniProt
RGD
PMID:19833968 GO_REF:0000024 MGI:4366197 NCBI chr 2:54,240,298...54,275,978
Ensembl chr 2:54,240,137...54,275,978
JBrowse link
G Prkaa2 protein kinase AMP-activated catalytic subunit alpha 2 involved_in ISS
ISO
IEA
GO_REF:0000024
(MGI:4366197|PMID:19833968)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:19833968 GO_REF:0000024 GO_REF:0000107 MGI:4366197 NCBI chr 5:119,807,992...119,879,987
Ensembl chr 5:119,813,226...119,879,543
JBrowse link
G Prkcg protein kinase C, gamma involved_in ISS
ISO
GO_REF:0000024
(MGI:5467682|PMID:23185022)
UniProt
RGD
PMID:23185022 GO_REF:0000024 MGI:5467682 NCBI chr 1:65,832,851...65,860,676
Ensembl chr 1:65,832,855...65,859,384
JBrowse link
G Prkdc protein kinase, DNA-activated, catalytic subunit involved_in ISO (MGI:5554971|PMID:24158435) RGD PMID:24158435 MGI:5554971 NCBI chr11:85,040,790...85,258,357
Ensembl chr11:85,040,792...85,257,952
JBrowse link
G Prox1 prospero homeobox 1 involved_in ISO (PMID:23723244) RGD PMID:23723244 NCBI chr13:101,669,184...101,719,804
Ensembl chr13:101,669,184...101,711,183
JBrowse link
G Pspc1 paraspeckle component 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:5444785|PMID:22966205)
UniProt
RGD
PMID:22966205 GO_REF:0000024 MGI:5444785 NCBI chr15:30,828,617...30,911,315
Ensembl chr15:30,828,626...30,911,202
JBrowse link
G Rock2 Rho-associated coiled-coil containing protein kinase 2 involved_in ISS
ISO
GO_REF:0000024
(MGI:5567901|PMID:23172836)
(PMID:23172836)
UniProt
RGD
PMID:23172836 GO_REF:0000024 MGI:5567901 NCBI chr 6:39,679,116...39,774,033
Ensembl chr 6:39,679,082...39,774,031
JBrowse link
G Rora RAR-related orphan receptor A involved_in ISO (MGI:5567901|PMID:23172836) RGD PMID:23172836 MGI:5567901 NCBI chr 8:69,301,635...70,034,741
Ensembl chr 8:69,301,733...70,025,931
JBrowse link
G Rorb RAR-related orphan receptor B involved_in IEA
ISO
ISS
GO_REF:0000107
(MGI:3712731|PMID:17303680)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:17303680 GO_REF:0000024 GO_REF:0000107 MGI:3712731 NCBI chr 1:216,363,629...216,544,390
Ensembl chr 1:216,363,629...216,544,390
JBrowse link
G Sfpq splicing factor proline and glutamine rich involved_in ISO (MGI:5444785|PMID:22966205) RGD PMID:22966205 MGI:5444785 NCBI chr 5:139,338,034...139,353,476
Ensembl chr 5:139,338,075...139,353,472
JBrowse link
G Siah2 siah E3 ubiquitin protein ligase 2 involved_in ISO
ISS
(PMID:26392558)
(MGI:6241928|PMID:26392558)
GO_REF:0000024
RGD
UniProt
PMID:26392558 GO_REF:0000024 MGI:6241928 NCBI chr 2:142,913,924...142,931,752
Ensembl chr 2:142,914,003...142,931,950
JBrowse link
G Spsb4 splA/ryanodine receptor domain and SOCS box containing 4 involved_in ISO (PMID:26392558) RGD PMID:26392558 NCBI chr 8:97,536,519...97,609,757
Ensembl chr 8:97,536,520...97,609,787
JBrowse link
G Srrd SRR1 domain containing involved_in ISO (MGI:6282940|PMID:28802827) RGD PMID:28802827 MGI:6282940 NCBI chr12:44,294,675...44,300,287
Ensembl chr12:44,294,271...44,300,287
JBrowse link
G Tardbp TAR DNA binding protein involved_in ISO (MGI:6253084|PMID:27123980) RGD PMID:27123980 MGI:6253084 NCBI chr 5:159,050,518...159,062,218
Ensembl chr 5:159,051,799...159,062,055
JBrowse link
G Timeless timeless circadian regulator involved_in ISO
ISS
IEA
(PMID:23418588)
(MGI:5578016|PMID:23418588)
GO_REF:0000024
GO_REF:0000107
RGD
UniProt
Ensembl
PMID:23418588 GO_REF:0000024 GO_REF:0000107 MGI:5578016 NCBI chr 7:654,804...678,769
Ensembl chr 7:654,822...678,738
JBrowse link
G Top2a DNA topoisomerase II alpha involved_in ISS
ISO
IEA
GO_REF:0000024
(MGI:5613450|PMID:24321095)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:24321095 GO_REF:0000024 GO_REF:0000107 MGI:5613450 NCBI chr10:83,946,186...83,975,694
Ensembl chr10:83,945,735...83,976,874
JBrowse link
G Ube3a ubiquitin protein ligase E3A involved_in ISO (PMID:24728990)
(MGI:5607382|PMID:24728990)
RGD PMID:24728990 MGI:5607382 NCBI chr 1:110,070,260...110,161,675
Ensembl chr 1:110,070,480...110,157,250
JBrowse link
G Usp7 ubiquitin specific peptidase 7 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(MGI:6253084|PMID:27123980)
(PMID:27123980)
UniProt
Ensembl
RGD
PMID:27123980 GO_REF:0000024 GO_REF:0000107 MGI:6253084 NCBI chr10:6,880,684...6,925,033
Ensembl chr10:6,828,795...6,925,355
JBrowse link
G Usp9x ubiquitin specific peptidase 9, X-linked involved_in ISO (PMID:29626158) RGD PMID:29626158 NCBI chr  X:9,588,825...9,726,993
Ensembl chr  X:9,588,825...9,696,711
JBrowse link
entrainment of circadian clock term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atoh7 atonal bHLH transcription factor 7 acts_upstream_of_or_within ISO MGI:2159013 (MGI:2445865|PMID:12451142) RGD PMID:12451142 MGI:2445865 NCBI chr20:25,530,826...25,531,275
Ensembl chr20:25,530,826...25,531,275
JBrowse link
G Chrm1 cholinergic receptor, muscarinic 1 involved_in ISO (PMID:12196552) RGD PMID:12196552 NCBI chr 1:205,567,046...205,583,001
Ensembl chr 1:205,567,220...205,582,356
JBrowse link
G Clock clock circadian regulator IEP RGD PMID:10095082 RGD:632379 NCBI chr14:31,908,542...31,992,673
Ensembl chr14:31,908,566...31,990,400
JBrowse link
G Id2 inhibitor of DNA binding 2 acts_upstream_of_or_within ISO MGI:3838359 (MGI:3838062|PMID:19217292) RGD PMID:19217292 MGI:3838062 NCBI chr 6:41,740,556...41,742,393
Ensembl chr 6:41,728,946...41,744,400
JBrowse link
G Phlpp1 PH domain and leucine rich repeat protein phosphatase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:4421807 (MGI:4420841|PMID:20080691)
Ensembl
RGD
PMID:20080691 GO_REF:0000107 MGI:4420841 NCBI chr13:22,308,532...22,530,978
Ensembl chr13:22,308,548...22,530,977
JBrowse link
G Sox14 SRY-box transcription factor 14 acts_upstream_of_or_within ISO (MGI:5440343|PMID:22920256) RGD PMID:22920256 MGI:5440343 NCBI chr 8:100,421,982...100,423,918
Ensembl chr 8:100,421,982...100,423,918
JBrowse link
entrainment of circadian clock by photoperiod term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aanat aralkylamine N-acetyltransferase TAS RGD PMID:8770929 RGD:1298540 NCBI chr10:101,827,072...101,831,805
Ensembl chr10:101,827,301...101,831,801
JBrowse link
G Atoh7 atonal bHLH transcription factor 7 involved_in ISO (MGI:5699646|PMID:26392540) RGD PMID:26392540 MGI:5699646 NCBI chr20:25,530,826...25,531,275
Ensembl chr20:25,530,826...25,531,275
JBrowse link
G Bhlhe40 basic helix-loop-helix family, member e40 involved_in IEA
ISO
GO_REF:0000107
(MGI:3798698|PMID:18411297)
Ensembl
RGD
PMID:18411297 GO_REF:0000107 MGI:3798698 NCBI chr 4:141,618,453...141,624,154
Ensembl chr 4:141,618,476...141,624,774
JBrowse link
G Crtc1 CREB regulated transcription coactivator 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:5532783|PMID:23993098)
UniProt
RGD
PMID:23993098 GO_REF:0000024 MGI:5532783 NCBI chr16:18,988,197...19,046,913
Ensembl chr16:18,988,250...19,043,381
JBrowse link
G Cry1 cryptochrome circadian regulator 1 involved_in ISS
ISO
IBA
GO_REF:0000024
(MGI:5490394|PMID:23616524)
PMID:21873635
UniProt
RGD
PMID:23616524 PMID:21873635 GO_REF:0000024 MGI:5490394, RGD:13792537 NCBI chr 7:18,529,823...18,594,092
Ensembl chr 7:18,529,823...18,594,091
JBrowse link
G Cry2 cryptochrome circadian regulator 2 involved_in ISS
ISO
IBA
IEA
GO_REF:0000024
(MGI:5490394|PMID:23616524)
PMID:21873635
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:23616524 PMID:21873635 GO_REF:0000024 GO_REF:0000107 MGI:5490394, RGD:13792537 NCBI chr 3:78,374,995...78,405,001
Ensembl chr 3:78,374,995...78,404,965
JBrowse link
G Fbxl12 F-box and leucine-rich repeat protein 12 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:19,175,864...19,183,373
Ensembl chr 8:19,160,352...19,183,607
JBrowse link
G Fbxl21 F-box and leucine-rich repeat protein 21 involved_in IBA
ISO
PMID:21873635
(MGI:5470183|PMID:23452855), (MGI:5487698|PMID:23452856)
RGD PMID:23452855 PMID:23452856 PMID:21873635 MGI:5470183 MGI:5487698, RGD:13792537 NCBI chr17:8,060,412...8,077,415
Ensembl chr17:8,060,414...8,073,359
JBrowse link
G Fbxl22 F-box and leucine-rich repeat protein 22 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:67,069,998...67,076,685
Ensembl chr 8:67,069,998...67,076,685
JBrowse link
G Fbxl3 F-box and leucine-rich repeat protein 3 involved_in IBA
ISO
PMID:21873635
(MGI:5470183|PMID:23452855), (MGI:5487698|PMID:23452856), (MGI:5490394|PMID:23616524)
RGD PMID:23452855 PMID:23452856 PMID:23616524 PMID:21873635 MGI:5470183 MGI:5487698 MGI:5490394, RGD:13792537 NCBI chr15:79,906,795...79,926,678
Ensembl chr15:79,906,795...79,927,867
JBrowse link
G Fbxl6 F-box and leucine-rich repeat protein 6 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:108,259,097...108,262,528
Ensembl chr 7:108,257,160...108,262,513
JBrowse link
G Fbxl8 F-box and leucine-rich repeat protein 8 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr19:33,142,653...33,147,268
Ensembl chr19:33,142,715...33,147,262
JBrowse link
G Id2 inhibitor of DNA binding 2 involved_in ISS
ISO
GO_REF:0000024
(MGI:3838062|PMID:19217292)
UniProt
RGD
PMID:19217292 GO_REF:0000024 MGI:3838062 NCBI chr 6:41,740,556...41,742,393
Ensembl chr 6:41,728,946...41,744,400
JBrowse link
G Mta1 metastasis associated 1 involved_in ISS
ISO
IEA
GO_REF:0000024
(MGI:5582861|PMID:24089055)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:24089055 GO_REF:0000024 GO_REF:0000107 MGI:5582861 NCBI chr 6:132,178,608...132,217,641
Ensembl chr 6:132,178,853...132,217,641
JBrowse link
G Nr2f6 nuclear receptor subfamily 2, group F, member 6 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3574037 (MGI:3530176|PMID:15741322)
Ensembl
RGD
PMID:15741322 GO_REF:0000107 MGI:3530176 NCBI chr16:18,046,012...18,053,914
Ensembl chr16:18,046,013...18,053,459
JBrowse link
G Opn4 opsin 4 acts_upstream_of_or_within ISO (MGI:5925970|PMID:26320947) RGD PMID:26320947 MGI:5925970 NCBI chr16:9,920,408...9,929,580
Ensembl chr16:9,920,491...10,005,711
JBrowse link
G Opn5 opsin 5 involved_in ISO (MGI:5699646|PMID:26392540), (MGI:6376341|PMID:31607531), (MGI:6378274|PMID:30240620) RGD PMID:26392540 PMID:30240620 PMID:31607531 MGI:5699646 MGI:6376341 MGI:6378274 NCBI chr 9:18,368,393...18,416,098
Ensembl chr 9:18,368,416...18,415,476
JBrowse link
G Pde6b phosphodiesterase 6B involved_in ISO (MGI:6378274|PMID:30240620) RGD PMID:30240620 MGI:6378274 NCBI chr14:1,323,310...1,366,450
Ensembl chr14:1,323,310...1,366,450
JBrowse link
G Per1 period circadian regulator 1 involved_in IBA
ISO
ISS
IEA
PMID:21873635
(MGI:3578039|PMID:15888647)
GO_REF:0000024
GO_REF:0000107
RGD
UniProt
Ensembl
PMID:15888647 PMID:21873635 GO_REF:0000024 GO_REF:0000107 MGI:3578039, RGD:13792537 NCBI chr10:53,800,126...53,814,963
Ensembl chr10:53,805,535...53,814,431
JBrowse link
G Per2 period circadian regulator 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:92,007,289...92,049,551
Ensembl chr 9:92,007,296...92,049,459
JBrowse link
G Per3 period circadian regulator 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:161,460,228...161,495,404
Ensembl chr 5:161,459,533...161,495,607
JBrowse link
G Pml PML nuclear body scaffold involved_in ISO (MGI:5314433|PMID:22274616) RGD PMID:22274616 MGI:5314433 NCBI chr 8:58,627,347...58,661,927
Ensembl chr 8:58,628,837...58,658,971
JBrowse link
G Ppp1ca protein phosphatase 1 catalytic subunit alpha involved_in ISS
ISO
GO_REF:0000024
(MGI:5086036|PMID:21712997)
UniProt
RGD
PMID:21712997 GO_REF:0000024 MGI:5086036 NCBI chr 1:201,485,117...201,488,734
Ensembl chr 1:201,485,085...201,497,327
JBrowse link
G Ppp1cb protein phosphatase 1 catalytic subunit beta involved_in ISS
ISO
GO_REF:0000024
(MGI:5086036|PMID:21712997)
UniProt
RGD
PMID:21712997 GO_REF:0000024 MGI:5086036 NCBI chr 6:23,958,813...23,992,841
Ensembl chr 6:23,960,998...23,992,824
JBrowse link
G Ppp1cc protein phosphatase 1 catalytic subunit gamma involved_in ISS
ISO
GO_REF:0000024
(MGI:5086036|PMID:21712997)
UniProt
RGD
PMID:21712997 GO_REF:0000024 MGI:5086036 NCBI chr12:34,383,072...34,400,553
Ensembl chr12:34,383,072...34,400,553
JBrowse link
G Rbm4 RNA binding motif protein 4 involved_in ISO (MGI:3703208|PMID:17264215) RGD PMID:17264215 MGI:3703208 NCBI chr 1:202,078,442...202,087,506
Ensembl chr 1:202,085,279...202,105,380
JBrowse link
G Rbm4b RNA binding motif protein 4B involved_in ISS
ISO
GO_REF:0000024
(MGI:3703208|PMID:17264215)
UniProt
RGD
PMID:17264215 GO_REF:0000024 MGI:3703208 NCBI chr 1:202,047,934...202,058,025
Ensembl chr 1:202,047,927...202,058,020
JBrowse link
G Sik1 salt-inducible kinase 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:5532783|PMID:23993098)
UniProt
RGD
PMID:23993098 GO_REF:0000024 MGI:5532783 NCBI chr20:9,949,407...9,959,036
Ensembl chr20:9,947,396...9,958,991
JBrowse link
G Tp53 tumor protein p53 involved_in ISS
ISO
GO_REF:0000024
(MGI:5613453|PMID:24051492)
UniProt
RGD
PMID:24051492 GO_REF:0000024 MGI:5613453 NCBI chr10:54,300,070...54,311,525
Ensembl chr10:54,300,048...54,311,524
JBrowse link
G Usp2 ubiquitin specific peptidase 2 involved_in ISS
ISO
GO_REF:0000024
(MGI:5607210|PMID:23213472)
UniProt
RGD
PMID:23213472 GO_REF:0000024 MGI:5607210 NCBI chr 8:44,411,457...44,439,668
Ensembl chr 8:44,411,607...44,438,331
JBrowse link
negative regulation of circadian rhythm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cipc CLOCK-interacting pacemaker involved_in ISO (MGI:5532917|PMID:17310242) RGD PMID:17310242 MGI:5532917 NCBI chr 6:106,595,011...106,613,732
Ensembl chr 6:106,595,105...106,613,723
JBrowse link
G Cry1 cryptochrome circadian regulator 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:4410413|PMID:19605937), (MGI:5532917|PMID:17310242)
UniProt
RGD
PMID:17310242 PMID:19605937 GO_REF:0000024 MGI:4410413 MGI:5532917 NCBI chr 7:18,529,823...18,594,092
Ensembl chr 7:18,529,823...18,594,091
JBrowse link
G Cry2 cryptochrome circadian regulator 2 involved_in ISS
ISO
IEA
GO_REF:0000024
(MGI:4410413|PMID:19605937)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:19605937 GO_REF:0000024 GO_REF:0000107 MGI:4410413 NCBI chr 3:78,374,995...78,405,001
Ensembl chr 3:78,374,995...78,404,965
JBrowse link
G Pasd1 PAS domain containing repressor 1 involved_in ISO (PMID:25936801) RGD PMID:25936801 NCBI chr  X:149,617,933...149,639,214
Ensembl chr  X:149,620,972...149,638,675
JBrowse link
G Per2 period circadian regulator 2 involved_in ISS
ISO
GO_REF:0000024
(MGI:4410413|PMID:19605937)
UniProt
RGD
PMID:19605937 GO_REF:0000024 MGI:4410413 NCBI chr 9:92,007,289...92,049,551
Ensembl chr 9:92,007,296...92,049,459
JBrowse link
G Piwil2 piwi-like RNA-mediated gene silencing 2 involved_in ISO (PMID:28903391)
(MGI:6285118|PMID:28903391)
RGD PMID:28903391 MGI:6285118 NCBI chr15:45,431,402...45,498,034
Ensembl chr15:45,431,703...45,497,702
JBrowse link
G Sfpq splicing factor proline and glutamine rich involved_in ISO (MGI:5014424|PMID:21680841) RGD PMID:21680841 MGI:5014424 NCBI chr 5:139,338,034...139,353,476
Ensembl chr 5:139,338,075...139,353,472
JBrowse link
G Sin3a SIN3 transcription regulator family member A involved_in ISO (MGI:5014424|PMID:21680841) RGD PMID:21680841 MGI:5014424 NCBI chr 8:57,481,539...57,536,195
Ensembl chr 8:57,481,573...57,536,192
JBrowse link
G Suv39h1 SUV39H1 histone lysine methyltransferase involved_in ISO (MGI:5569417|PMID:24413057) RGD PMID:24413057 MGI:5569417 NCBI chr  X:141,793,695...141,795,558 JBrowse link
G Suv39h2 SUV39H2 histone lysine methyltransferase involved_in ISO (MGI:5569417|PMID:24413057) RGD PMID:24413057 MGI:5569417 NCBI chr17:74,756,290...74,775,332
Ensembl chr17:74,756,306...74,775,332
JBrowse link
negative regulation of circadian sleep/wake cycle, non-REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ada adenosine deaminase IMP RGD PMID:19066225 RGD:5128864 NCBI chr 3:152,398,745...152,422,854
Ensembl chr 3:152,398,747...152,447,088
JBrowse link
G Adora1 adenosine A1 receptor IMP RGD PMID:19491711 RGD:2317916 NCBI chr13:45,658,872...45,695,821
Ensembl chr13:45,658,872...45,695,801
JBrowse link
negative regulation of circadian sleep/wake cycle, REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ghrl ghrelin and obestatin prepropeptide involved_in ISO (PMID:18329818) RGD PMID:18329818 NCBI chr 4:146,865,712...146,869,621
Ensembl chr 4:146,865,712...146,869,621
JBrowse link
G Htr7 5-hydroxytryptamine receptor 7 IDA RGD PMID:18466985 RGD:6480669 NCBI chr 1:233,636,442...233,761,063
Ensembl chr 1:233,636,452...233,760,626
JBrowse link
G Ptger4 prostaglandin E receptor 4 IMP RGD PMID:10923657 RGD:10043386 NCBI chr 2:54,330,563...54,347,451
Ensembl chr 2:54,335,424...54,346,670
JBrowse link
negative regulation of circadian sleep/wake cycle, sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adora1 adenosine A1 receptor IDA in the sleep-promoting area of the lateral preoptic area of the brain RGD PMID:16109808 RGD:1625234 NCBI chr13:45,658,872...45,695,821
Ensembl chr13:45,658,872...45,695,801
JBrowse link
G Drd1 dopamine receptor D1 IDA RGD PMID:12944496 RGD:1581422 NCBI chr17:10,540,440...10,544,971
Ensembl chr17:10,540,558...10,545,002
JBrowse link
G Drd2 dopamine receptor D2 IDA RGD PMID:12944496 RGD:1581422 NCBI chr 8:49,708,903...49,772,888
Ensembl chr 8:49,708,927...49,772,875
JBrowse link
negative regulation of circadian sleep/wake cycle, wakefulness term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ptger3 prostaglandin E receptor 3 IMP RGD PMID:10923657 RGD:10043386 NCBI chr 2:246,606,131...246,750,970
Ensembl chr 2:246,606,183...246,684,434
JBrowse link
negative regulation of locomotor rhythm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lepr leptin receptor IMP RGD PMID:16982424 RGD:10412019 NCBI chr 5:116,294,409...116,477,904
Ensembl chr 5:116,289,823...116,475,908
JBrowse link
positive regulation of circadian rhythm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arntl aryl hydrocarbon receptor nuclear translocator-like involved_in ISS
ISO
GO_REF:0000024
(MGI:4410413|PMID:19605937)
UniProt
RGD
PMID:19605937 GO_REF:0000024 MGI:4410413 NCBI chr 1:167,331,756...167,430,235
Ensembl chr 1:167,331,633...167,430,231
JBrowse link
G Arntl2 aryl hydrocarbon receptor nuclear translocator-like 2 involved_in ISO (MGI:4410413|PMID:19605937) RGD PMID:19605937 MGI:4410413 NCBI chr 4:179,699,432...179,747,710
Ensembl chr 4:179,699,502...179,746,949
JBrowse link
G Btrc beta-transducin repeat containing E3 ubiquitin protein ligase involved_in ISO (MGI:4844267|PMID:18782782) RGD PMID:18782782 MGI:4844267 NCBI chr 1:244,210,299...244,380,126
Ensembl chr 1:244,210,314...244,376,721
JBrowse link
G Fbxw11 F-box and WD repeat domain containing 11 involved_in ISO (MGI:4844267|PMID:18782782) RGD PMID:18782782 MGI:4844267 NCBI chr10:17,232,735...17,330,584
Ensembl chr10:17,227,181...17,330,571
JBrowse link
G Mtnr1b melatonin receptor 1B IDA RGD PMID:12643943 RGD:9588678 NCBI chr 8:12,638,219...12,652,737
Ensembl chr 8:12,638,219...12,652,737
JBrowse link
G Nkx2-1 NK2 homeobox 1 involved_in IEA
ISO
ISS
GO_REF:0000107
(MGI:5574291|PMID:22356123)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:22356123 GO_REF:0000024 GO_REF:0000107 MGI:5574291 NCBI chr 6:73,996,601...74,001,483
Ensembl chr 6:73,996,601...73,999,791
JBrowse link
G Nr1d1 nuclear receptor subfamily 1, group D, member 1 IDA RGD PMID:18946026 RGD:10448985 NCBI chr10:83,728,348...83,735,562
Ensembl chr10:83,728,318...83,735,705
JBrowse link
G Prkg1 protein kinase cGMP-dependent 1 IMP RGD PMID:12930792 RGD:7777105 NCBI chr 1:228,409,883...229,638,794 JBrowse link
G Rora RAR-related orphan receptor A involved_in ISO (MGI:5504349|PMID:22753030) RGD PMID:22753030 MGI:5504349 NCBI chr 8:69,301,635...70,034,741
Ensembl chr 8:69,301,733...70,025,931
JBrowse link
G Rorc RAR-related orphan receptor C involved_in ISO (MGI:5504349|PMID:22753030) RGD PMID:22753030 MGI:5504349 NCBI chr 2:182,009,707...182,034,910
Ensembl chr 2:182,009,286...182,034,907
JBrowse link
G Thrap3 thyroid hormone receptor associated protein 3 involved_in ISS
ISO
GO_REF:0000024
(PMID:24043798)
UniProt
RGD
PMID:24043798 GO_REF:0000024 NCBI chr 5:138,445,284...138,487,544
Ensembl chr 5:138,445,295...138,487,477
JBrowse link
G Timeless timeless circadian regulator IMP RGD PMID:14564007 RGD:734503 NCBI chr 7:654,804...678,769
Ensembl chr 7:654,822...678,738
JBrowse link
positive regulation of circadian sleep/wake cycle, non-REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alb albumin IDA RGD PMID:9748091 RGD:1625449 NCBI chr14:17,607,397...17,622,814
Ensembl chr14:17,607,381...17,622,836
JBrowse link
G Casp1 caspase 1 IMP RGD PMID:16455762 RGD:2315921 NCBI chr 8:2,587,812...2,597,403
Ensembl chr 8:2,587,831...2,597,383
JBrowse link
G Ghrh growth hormone releasing hormone IMP RGD PMID:19889861 PMID:20237285 RGD:2325188, RGD:10401262 NCBI chr 3:145,992,762...146,012,528
Ensembl chr 3:145,992,763...146,011,889
JBrowse link
G Ghrhr growth hormone releasing hormone receptor IMP RGD PMID:20237285 RGD:10401262 NCBI chr 4:84,498,159...84,532,847
Ensembl chr 4:84,500,212...84,532,776
JBrowse link
G Ghrl ghrelin and obestatin prepropeptide involved_in ISO (PMID:18329818) RGD PMID:18329818 NCBI chr 4:146,865,712...146,869,621
Ensembl chr 4:146,865,712...146,869,621
JBrowse link
G Mtnr1b melatonin receptor 1B IDA
IMP
RGD PMID:19429170 PMID:22171046 RGD:9588660, RGD:9588665 NCBI chr 8:12,638,219...12,652,737
Ensembl chr 8:12,638,219...12,652,737
JBrowse link
G Npy2r neuropeptide Y receptor Y2 IDA RGD PMID:16378653 RGD:1642507 NCBI chr 2:167,901,999...167,912,165
Ensembl chr 2:167,903,879...167,905,024
JBrowse link
G Ptger3 prostaglandin E receptor 3 IMP RGD PMID:10923657 RGD:10043386 NCBI chr 2:246,606,131...246,750,970
Ensembl chr 2:246,606,183...246,684,434
JBrowse link
G Ptger4 prostaglandin E receptor 4 IMP RGD PMID:10923657 RGD:10043386 NCBI chr 2:54,330,563...54,347,451
Ensembl chr 2:54,335,424...54,346,670
JBrowse link
positive regulation of circadian sleep/wake cycle, REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ghrh growth hormone releasing hormone NOT|involved_in ISO (PMID:15538933) RGD PMID:15538933 NCBI chr 3:145,992,762...146,012,528
Ensembl chr 3:145,992,763...146,011,889
JBrowse link
G Pmch pro-melanin-concentrating hormone IDA RGD PMID:12964948 RGD:1642489 NCBI chr 7:22,511,934...22,513,250
Ensembl chr 7:22,511,934...22,513,250
JBrowse link
G Uts2 urotensin 2 IDA RGD PMID:15944374 RGD:2306844 NCBI chr 5:161,450,846...161,456,235
Ensembl chr 5:161,450,846...161,456,237
JBrowse link
G Uts2r urotensin 2 receptor IMP RGD PMID:15944374 RGD:2306844 NCBI chr10:106,438,092...106,439,252
Ensembl chr10:106,438,092...106,439,252
JBrowse link
positive regulation of circadian sleep/wake cycle, sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adora2a adenosine A2a receptor IDA in the sleep-promoting area of the lateral preoptic area of the brain RGD PMID:16109808 RGD:1625234 NCBI chr20:13,315,848...13,333,386
Ensembl chr20:13,315,853...13,333,386
JBrowse link
G Opn4 opsin 4 acts_upstream_of_or_within ISO (MGI:5925970|PMID:26320947) RGD PMID:26320947 MGI:5925970 NCBI chr16:9,920,408...9,929,580
Ensembl chr16:9,920,491...10,005,711
JBrowse link
positive regulation of circadian sleep/wake cycle, wakefulness term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nlgn1 neuroligin 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:5492265|PMID:23716671)
UniProt
RGD
PMID:23716671 GO_REF:0000024 MGI:5492265 NCBI chr 2:108,256,236...109,181,530
Ensembl chr 2:108,257,824...109,002,464
JBrowse link
G Nps neuropeptide S IDA RGD PMID:22300983 RGD:9831203 NCBI chr 1:190,077,040...190,080,821
Ensembl chr 1:190,077,040...190,080,821
JBrowse link
G Uts2 urotensin 2 IDA RGD PMID:15944374 RGD:2306844 NCBI chr 5:161,450,846...161,456,235
Ensembl chr 5:161,450,846...161,456,237
JBrowse link
G Uts2r urotensin 2 receptor IMP RGD PMID:15944374 RGD:2306844 NCBI chr10:106,438,092...106,439,252
Ensembl chr10:106,438,092...106,439,252
JBrowse link
regulation of circadian sleep/wake cycle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nr1d1 nuclear receptor subfamily 1, group D, member 1 involved_in IEA
ISO
ISS
GO_REF:0000107
(MGI:6283959|PMID:30792350)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:30792350 GO_REF:0000024 GO_REF:0000107 MGI:6283959 NCBI chr10:83,728,348...83,735,562
Ensembl chr10:83,728,318...83,735,705
JBrowse link
regulation of circadian sleep/wake cycle, non-REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chrnb2 cholinergic receptor nicotinic beta 2 subunit acts_upstream_of_or_within ISO MGI:1926253 (MGI:3575072|PMID:15215293) RGD PMID:15215293 MGI:3575072 NCBI chr 2:175,181,402...175,189,619
Ensembl chr 2:175,181,402...175,189,619
JBrowse link
G Il18 interleukin 18 involved_in TAS PMID:11506998 UniProt PMID:11506998 RGD:8554500 NCBI chr 8:50,904,630...50,932,887
Ensembl chr 8:50,906,960...50,932,887
JBrowse link
G Il6 interleukin 6 IMP RGD PMID:12667648 RGD:1358315 NCBI chr 4:5,214,602...5,219,178
Ensembl chr 4:5,213,394...5,219,178
JBrowse link
G Kcna2 potassium voltage-gated channel subfamily A member 2 involved_in ISO (MGI:3770734|PMID:17925011) RGD PMID:17925011 MGI:3770734 NCBI chr 2:194,704,555...194,718,387
Ensembl chr 2:194,704,639...194,718,400
JBrowse link
regulation of circadian sleep/wake cycle, REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chrnb2 cholinergic receptor nicotinic beta 2 subunit acts_upstream_of_or_within ISO MGI:1926253 (MGI:3575072|PMID:15215293) RGD PMID:15215293 MGI:3575072 NCBI chr 2:175,181,402...175,189,619
Ensembl chr 2:175,181,402...175,189,619
JBrowse link
regulation of circadian sleep/wake cycle, sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ada adenosine deaminase IEP RGD PMID:11038259 RGD:631747 NCBI chr 3:152,398,745...152,422,854
Ensembl chr 3:152,398,747...152,447,088
JBrowse link
G Adrb1 adrenoceptor beta 1 involved_in ISS
ISO
IEA
GO_REF:0000024
(MGI:6368107|PMID:25083013)
GO_REF:0000107
(PMID:25083013)
UniProt
RGD
Ensembl
PMID:25083013 GO_REF:0000024 GO_REF:0000107 MGI:6368107 NCBI chr 1:255,772,217...255,773,617
Ensembl chr 1:255,771,597...255,807,259
JBrowse link
G Cort cortistatin IDA RGD PMID:8622767 RGD:727760 NCBI chr 5:159,560,591...159,562,032 JBrowse link
G Csf2 colony stimulating factor 2 IMP RGD PMID:12047622 RGD:10449529 NCBI chr10:38,386,945...38,388,926
Ensembl chr10:38,386,945...38,389,199
JBrowse link
G Drd3 dopamine receptor D3 IMP RGD PMID:15913875 RGD:1625069 NCBI chr11:56,879,689...56,931,901
Ensembl chr11:56,879,689...56,940,596
JBrowse link
G Nmu neuromedin U involved_in IDA PMID:20233222 UniProt PMID:20233222 RGD:12911001 NCBI chr14:31,844,564...31,872,196
Ensembl chr14:31,844,728...31,872,192
JBrowse link
G Per3 period circadian regulator 3 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(MGI:5300112|PMID:21957163)
(PMID:17346965), (PMID:19716732), (PMID:24439663), (PMID:24577121), (PMID:26903630)
UniProt
Ensembl
RGD
PMID:17346965 PMID:19716732 PMID:21957163 PMID:24439663 PMID:24577121 More... GO_REF:0000024 GO_REF:0000107 MGI:5300112 NCBI chr 5:161,460,228...161,495,404
Ensembl chr 5:161,459,533...161,495,607
JBrowse link
G Pglyrp1 peptidoglycan recognition protein 1 IEP RGD PMID:11145837 RGD:724610 NCBI chr 1:78,531,815...78,537,001
Ensembl chr 1:78,531,815...78,537,001
JBrowse link
G Ptgds prostaglandin D2 synthase involved_in ISS
ISO
PMID:10781097
(MGI:3687807|PMID:10781097)
RGD PMID:10781097 PMID:10781097 MGI:3687807, RGD:8553735 NCBI chr 3:8,281,899...8,284,833
Ensembl chr 3:8,281,899...8,284,833
JBrowse link
regulation of circadian sleep/wake cycle, wakefulness term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hcrtr2 hypocretin receptor 2 involved_in ISS
ISO
GO_REF:0000024
(PMID:11282968)
UniProt
RGD
PMID:11282968 GO_REF:0000024 NCBI chr 8:76,989,834...77,105,893
Ensembl chr 8:76,989,834...77,105,893
JBrowse link
G Ptger3 prostaglandin E receptor 3 IMP RGD PMID:10923657 RGD:10043386 NCBI chr 2:246,606,131...246,750,970
Ensembl chr 2:246,606,183...246,684,434
JBrowse link
G Ptger4 prostaglandin E receptor 4 IMP RGD PMID:10923657 RGD:10043386 NCBI chr 2:54,330,563...54,347,451
Ensembl chr 2:54,335,424...54,346,670
JBrowse link
regulation of locomotor rhythm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mtor mechanistic target of rapamycin kinase involved_in ISS
ISO
GO_REF:0000024
(MGI:6159528|PMID:29750810)
UniProt
RGD
PMID:29750810 GO_REF:0000024 MGI:6159528 NCBI chr 5:158,884,856...158,994,311
Ensembl chr 5:158,884,804...158,994,311
JBrowse link
G Oprl1 opioid related nociceptin receptor 1 IMP RGD PMID:16310969 RGD:9835023 NCBI chr 3:168,831,934...168,839,920
Ensembl chr 3:168,834,003...168,839,920
JBrowse link
G Zfhx3 zinc finger homeobox 3 involved_in ISO (MGI:5660827|PMID:26232227) RGD PMID:26232227 MGI:5660827 NCBI chr19:36,257,196...36,886,104
Ensembl chr19:36,630,254...36,881,771
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19504
    regulation of biological process 12770
      regulation of circadian rhythm 134
        entrainment of circadian clock + 34
        negative regulation of circadian rhythm + 19
        positive regulation of circadian rhythm + 27
        regulation of circadian sleep/wake cycle + 35
        regulation of locomotor rhythm + 4
        temperature compensation of the circadian clock 0
Path 2
Term Annotations click to browse term
  biological_process 19504
    rhythmic process 398
      circadian rhythm 269
        regulation of circadian rhythm 134
          entrainment of circadian clock + 34
          negative regulation of circadian rhythm + 19
          positive regulation of circadian rhythm + 27
          regulation of circadian sleep/wake cycle + 35
          regulation of locomotor rhythm + 4
          temperature compensation of the circadian clock 0
paths to the root