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ONTOLOGY REPORT - ANNOTATIONS

Term:defense response to bacterium
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Accession:GO:0042742 term browser browse the term
Definition:Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism.
Synonyms:exact_synonym: defence response to bacteria;   defence response to bacterium;   defense response to bacteria
 narrow_synonym: defense response to bacterium, incompatible interaction;   resistance response to pathogenic bacteria;   resistance response to pathogenic bacterium
 related_synonym: antibacterial peptide activity
 alt_id: GO:0009816;   GO:0042830

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defense response to bacterium term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adamts4 ADAM metallopeptidase with thrombospondin type 1 motif 4 acts_upstream_of_or_within ISO (PMID:23684986) MGI PMID:23684986 NCBI chrNW_004936903:490,718...500,443
Ensembl chrNW_004936903:491,139...500,443 		JBrowse link
G Adamts5 ADAM metallopeptidase with thrombospondin type 1 motif 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23684986) Ensembl
MGI		 PMID:23684986 GO_REF:0000107 NCBI chrNW_004936640:857,565...899,355
Ensembl chrNW_004936640:858,322...898,182 		JBrowse link
G Aicda activation induced cytidine deaminase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:14766966) Ensembl
MGI		 PMID:14766966 GO_REF:0000107 NCBI chrNW_004936870:25,039...34,601
Ensembl chrNW_004936870:25,039...34,601 		JBrowse link
G Akirin2 akirin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936510:4,216,893...4,221,962
Ensembl chrNW_004936510:4,216,955...4,221,962 		JBrowse link
G Ankrd17 ankyrin repeat domain 17 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936598:2,191,604...2,338,832
Ensembl chrNW_004936598:2,191,735...2,340,453 		JBrowse link
G Anxa3 annexin A3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936676:2,153,752...2,216,498
Ensembl chrNW_004936676:2,153,689...2,216,627 		JBrowse link
G Bcl3 BCL3 transcription coactivator involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9009202) Ensembl
MGI		 PMID:9009202 GO_REF:0000107 NCBI chrNW_004936706:1,410,848...1,427,822
Ensembl chrNW_004936706:1,416,249...1,427,407 		JBrowse link
G Bpi bactericidal permeability increasing protein involved_in ISO
IEA		 RGD
UniProt		 PMID:11445707 GO_REF:0000043 RGD:1331346 NCBI chrNW_004936561:3,043,520...3,069,680
Ensembl chrNW_004936561:3,043,578...3,069,689 		JBrowse link
G Bpifc BPI fold containing family C involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936492:7,299,085...7,332,518
Ensembl chrNW_004936492:7,299,085...7,332,518 		JBrowse link
G Casp7 caspase 7 involved_in
acts_upstream_of		 IEA
ISO		 (MGI:7327228|PMID:35705808) Ensembl
UniProt		 PMID:35705808 GO_REF:0000107 MGI:7327228 NCBI chrNW_004936486:4,082,664...4,114,942
Ensembl chrNW_004936486:4,088,372...4,114,955 		JBrowse link
G Chga chromogranin A involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936733:915,700...927,220
Ensembl chrNW_004936733:915,830...927,409 		JBrowse link
G Clec4d C-type lectin domain family 4 member D involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23602766) Ensembl
MGI		 PMID:23602766 GO_REF:0000107 NCBI chrNW_004936858:303,639...312,092
Ensembl chrNW_004936858:303,639...312,083 		JBrowse link
G Clec4e C-type lectin domain family 4 member E involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23602766) Ensembl
MGI		 PMID:23602766 GO_REF:0000107 NCBI chrNW_004936858:316,954...321,668
Ensembl chrNW_004936858:316,954...321,668 		JBrowse link
G Colec12 collectin subfamily member 12 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936550:169,084...350,209
Ensembl chrNW_004936550:169,084...350,501 		JBrowse link
G Cxcl13 C-X-C motif chemokine ligand 13 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936676:1,309,625...1,314,532
Ensembl chrNW_004936676:1,309,625...1,313,933 		JBrowse link
G Defb1 defensin beta 1 acts_upstream_of_or_within ISO (PMID:21115716) MGI PMID:21115716 NCBI chrNW_004936615:4,780,229...4,790,516 JBrowse link
G Defb123 defensin beta 123 involved_in IEA UniProt GO_REF:0000043 GO_REF:0000104 GO_REF:0000117 NCBI chrNW_004936485:18,481,031...18,487,862
Ensembl chrNW_004936485:18,481,031...18,487,862 		JBrowse link
G Defb124 defensin beta 124 involved_in IEA UniProt GO_REF:0000043 GO_REF:0000104 NCBI chrNW_004936485:18,498,332...18,501,477
Ensembl chrNW_004936485:18,498,332...18,501,477 		JBrowse link
G Dhx15 DEAH-box helicase 15 involved_in ISO (MGI:6505029|PMID:33483420) UniProt PMID:33483420 MGI:6505029 NCBI chrNW_004936477:4,797,345...4,844,804 JBrowse link
G Eppin epididymal peptidase inhibitor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936514:7,387,348...7,392,274
Ensembl chrNW_004936514:7,387,348...7,392,788 		JBrowse link
G Epx eosinophil peroxidase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936490:4,876,857...4,887,275
Ensembl chrNW_004936490:4,876,877...4,887,275 		JBrowse link
G Fcer1g Fc fragment of IgE receptor Ig involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11237803) TreeGrafter
MGI		 PMID:11237803 GO_REF:0000118 NCBI chrNW_004936903:514,278...517,975
Ensembl chrNW_004936903:514,761...517,948 		JBrowse link
G Fcgr1a Fc fragment of IgG receptor Ia involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11911824) Ensembl
MGI		 PMID:11911824 GO_REF:0000107 NCBI chrNW_004936580:115,552...144,970
Ensembl chrNW_004936580:115,450...145,785 		JBrowse link
G Gsdma gasdermin A involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936490:15,105,030...15,115,007
Ensembl chrNW_004936490:15,105,030...15,114,599 		JBrowse link
G Gsdmc gasdermin C involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936470:18,840,455...18,856,022
Ensembl chrNW_004936470:18,843,579...18,855,639 		JBrowse link
G Gsdmd gasdermin D involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936470:8,567,085...8,571,448
Ensembl chrNW_004936470:8,567,091...8,571,467 		JBrowse link
G Hamp hepcidin antimicrobial peptide involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23390527)
(PMID:11113131)		 Ensembl
MGI
TreeGrafter		 PMID:11113131 PMID:23390527 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936570:1,009,344...1,010,654
Ensembl chrNW_004936570:1,009,312...1,010,686 		JBrowse link
G Ifnb1 interferon beta 1 acts_upstream_of_or_within ISO (PMID:15240719) MGI PMID:15240719 NCBI chrNW_004936652:2,736,270...2,736,833 JBrowse link
G Ifne interferon epsilon involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936652:3,140,568...3,141,122
Ensembl chrNW_004936652:3,140,568...3,141,122 		JBrowse link
G Ifng interferon gamma acts_upstream_of_or_within ISO (PMID:15240719) MGI PMID:15240719 NCBI chrNW_004936545:6,139,130...6,144,543
Ensembl chrNW_004936545:6,139,116...6,148,452 		JBrowse link
G Ikbkg inhibitor of nuclear factor kappa B kinase regulatory subunit gamma involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936809:1,280,254...1,306,964
Ensembl chrNW_004936809:1,257,654...1,301,813 		JBrowse link
G Il10 interleukin 10 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10899905) Ensembl
MGI		 PMID:10899905 GO_REF:0000107 NCBI chrNW_004936557:5,834,874...5,838,502
Ensembl chrNW_004936557:5,834,874...5,838,502 		JBrowse link
G Irf8 interferon regulatory factor 8 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18045875) Ensembl
MGI		 PMID:18045875 GO_REF:0000107 NCBI chrNW_004936641:2,608,109...2,622,446
Ensembl chrNW_004936641:2,608,100...2,622,409 		JBrowse link
G Isg15 ISG15 ubiquitin like modifier involved_in ISO (PMID:22859821)
(MGI:5437528|PMID:22859821)		 UniProt PMID:22859821 MGI:5437528 NCBI chrNW_004936737:2,043,383...2,044,761 JBrowse link
G Lbp lipopolysaccharide binding protein involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936561:3,017,471...3,035,481
Ensembl chrNW_004936561:3,016,926...3,035,552 		JBrowse link
G Lcn2 lipocalin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936487:15,721,752...15,725,396
Ensembl chrNW_004936487:15,721,684...15,728,221 		JBrowse link
G Leap2 liver enriched antimicrobial peptide 2 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936647:2,343,149...2,345,616
Ensembl chrNW_004936647:2,343,160...2,344,113 		JBrowse link
G Lgals4 galectin 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:27427436) Ensembl
MGI		 PMID:27427436 GO_REF:0000107 NCBI chrNW_004936661:1,772,394...1,780,590
Ensembl chrNW_004936661:1,772,075...1,779,626 		JBrowse link
G LOC101954543 caspase-1-like involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936551:3,230,060...3,240,496 JBrowse link
G LOC101955647 beta-defensin 121 involved_in IEA UniProt GO_REF:0000043 GO_REF:0000104 GO_REF:0000117 NCBI chrNW_004936485:18,426,481...18,427,866 JBrowse link
G LOC101957863 guanylate-binding protein 1-like involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936732:52,642...67,706
Ensembl chrNW_004936732:52,598...69,691 		JBrowse link
G LOC101958779 lysozyme C-like involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936545:7,134,214...7,138,573
Ensembl chrNW_004936545:7,134,165...7,170,474 		JBrowse link
G LOC101959058 lysozyme C involved_in IEA Ensembl
UniProt		 GO_REF:0000043 GO_REF:0000107 NCBI chrNW_004936545:7,151,591...7,157,908
Ensembl chrNW_004936545:7,134,165...7,170,474 		JBrowse link
G LOC101959346 lysozyme C involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936545:7,165,917...7,170,840
Ensembl chrNW_004936545:7,134,165...7,170,474 		JBrowse link
G LOC101961426 guanylate-binding protein 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936991:83,446...95,310
Ensembl chrNW_004936991:83,465...95,416 		JBrowse link
G LOC101961563 neutrophilic granule protein-like involved_in IEA UniProt GO_REF:0000043 GO_REF:0000117 NCBI chrNW_004936596:1,074,837...1,078,480 JBrowse link
G LOC101961846 neutrophil elastase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936588:345,678...347,420
Ensembl chrNW_004936588:345,678...347,413 		JBrowse link
G LOC101962700 cathelicidin antimicrobial peptide-like involved_in IEA InterPro
UniProt
Ensembl		 GO_REF:0000002 GO_REF:0000043 GO_REF:0000107 GO_REF:0000117 NCBI chrNW_004936596:1,711,313...1,713,213
Ensembl chrNW_004936596:1,711,246...1,713,234 		JBrowse link
G LOC101964473 caspase-4-like involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936551:3,242,381...3,269,821 JBrowse link
G LOC101965998 notch receptor 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23913046) Ensembl
MGI		 PMID:23913046 GO_REF:0000107 NCBI chrNW_004936872:454,273...539,544
Ensembl chrNW_004936872:390,852...536,321 		JBrowse link
G LOC101969863 sperm-associated antigen 11B-like involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004937117:109,397...111,539 JBrowse link
G LOC101969922 beta-defensin 110-like involved_in IEA UniProt
TreeGrafter		 GO_REF:0000043 GO_REF:0000104 GO_REF:0000118 NCBI chrNW_004936476:10,589,154...10,594,047
Ensembl chrNW_004936476:10,589,154...10,594,047 		JBrowse link
G LOC101971012 beta-defensin 13-like involved_in IEA UniProt GO_REF:0000043 GO_REF:0000104 NCBI chrNW_004937117:65,487...68,231 JBrowse link
G LOC101971305 beta-defensin 105-like involved_in IEA UniProt GO_REF:0000043 GO_REF:0000104 NCBI chrNW_004937117:79,064...80,798 JBrowse link
G LOC101971590 beta-defensin 106A-like involved_in IEA UniProt GO_REF:0000043 GO_REF:0000104 NCBI chrNW_004937117:93,394...96,412 JBrowse link
G LOC101971779 N-formyl peptide receptor 2-like involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004937026:169,334...170,717
Ensembl chrNW_004937026:167,935...170,389 		JBrowse link
G LOC101972196 beta-defensin 103A-like involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004937117:148,568...149,364 JBrowse link
G LOC101972464 beta-defensin 33-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004937117:154,856...174,343 JBrowse link
G LOC101972667 immunity related GTPase M involved_in ISO (MGI:3656111|PMID:16888103)
(MGI:4354422|PMID:19620982)
(PMID:19165925)
(PMID:25891078), (PMID:32753672), (PMID:32939830)		 UniProt PMID:16888103 PMID:19165925 PMID:19620982 PMID:25891078 PMID:32753672 More... MGI:3656111 MGI:4354422 NCBI chrNW_004936504:4,055,091...4,056,089 JBrowse link
G LOC101976500 haptoglobin involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936475:21,841,054...21,845,821 JBrowse link
G LOC106145530 sperm-associated antigen 11-like involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004937117:125,303...128,754 JBrowse link
G LOC110598145 WAP four-disulfide core domain protein 15A involved_in ISO (MGI:2450032|PMID:12574366) UniProt PMID:12574366 MGI:2450032 NCBI chrNW_004936514:7,650,114...7,651,139 JBrowse link
G LOC120891307 2'-5'-oligoadenylate synthase 1-like involved_in IEA Ensembl GO_REF:0000107 Ensembl chrNW_004936668:2,917,900...2,925,397 JBrowse link
G Lpo lactoperoxidase involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936490:4,821,421...4,838,377
Ensembl chrNW_004936490:4,821,910...4,840,018 		JBrowse link
G Lyg2 lysozyme g2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936661:1,589,105...1,597,713
Ensembl chrNW_004936661:1,589,105...1,597,666 		JBrowse link
G Lyst lysosomal trafficking regulator acts_upstream_of_or_within ISO (PMID:4589319), (PMID:4601767), (PMID:7988496) MGI PMID:4589319 PMID:4601767 PMID:7988496 NCBI chrNW_004936484:16,750,976...16,915,999
Ensembl chrNW_004936484:16,763,511...16,916,022 		JBrowse link
G Lyzl4 lysozyme like 4 NOT|involved_in ISO (MGI:5882876|PMID:21444326) UniProt PMID:21444326 MGI:5882876 NCBI chrNW_004936695:2,668,444...2,674,605
Ensembl chrNW_004936695:2,668,444...2,674,605 		JBrowse link
G Lyzl6 lysozyme like 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936541:1,801,350...1,804,767
Ensembl chrNW_004936541:1,801,350...1,804,908 		JBrowse link
G Map3k7 mitogen-activated protein kinase kinase kinase 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936510:1,772,971...1,836,075
Ensembl chrNW_004936510:1,772,971...1,837,765 		JBrowse link
G Mavs mitochondrial antiviral signaling protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936485:14,842,778...14,859,163
Ensembl chrNW_004936485:14,842,160...14,859,202 		JBrowse link
G Mmp7 matrix metallopeptidase 7 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11248802) Ensembl
MGI		 PMID:11248802 GO_REF:0000107 NCBI chrNW_004936551:5,388,456...5,395,071
Ensembl chrNW_004936551:5,388,459...5,395,071 		JBrowse link
G Mpeg1 macrophage expressed 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936581:3,428,515...3,436,877
Ensembl chrNW_004936581:3,421,256...3,431,706 		JBrowse link
G Mpo myeloperoxidase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936490:4,809,773...4,819,070
Ensembl chrNW_004936490:4,809,631...4,819,070 		JBrowse link
G Muc5b mucin 5B, oligomeric mucus/gel-forming acts_upstream_of_or_within ISO (PMID:24317696) MGI PMID:24317696 NCBI chrNW_004936816:174,943...209,241 JBrowse link
G Myd88 MYD88 innate immune signal transduction adaptor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936473:27,672,237...27,676,339
Ensembl chrNW_004936473:27,671,797...27,676,372 		JBrowse link
G Nagk N-acetylglucosamine kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936491:15,183,493...15,193,069
Ensembl chrNW_004936491:15,183,804...15,192,950 		JBrowse link
G Naip NLR family apoptosis inhibitory protein involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936549:5,000,526...5,069,110 JBrowse link
G Ncf1 neutrophil cytosolic factor 1 acts_upstream_of_or_within ISO (PMID:9116268)
(PMID:17526748)		 MGI PMID:9116268 PMID:17526748 NCBI chrNW_004936543:3,617,369...3,630,990
Ensembl chrNW_004936543:3,617,372...3,630,997 		JBrowse link
G Nlrc4 NLR family CARD domain containing 4 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936493:1,189,940...1,233,408
Ensembl chrNW_004936493:1,206,374...1,237,412 		JBrowse link
G Nlrp1 NLR family pyrin domain containing 1 acts_upstream_of_or_within ISO (PMID:16429160) MGI PMID:16429160 NCBI chrNW_004936677:2,248,153...2,290,802
Ensembl chrNW_004936677:2,248,903...2,289,151 		JBrowse link
G Nod1 nucleotide binding oligomerization domain containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936478:6,717,354...6,768,293
Ensembl chrNW_004936478:6,715,245...6,768,372 		JBrowse link
G Nod2 nucleotide binding oligomerization domain containing 2 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936475:3,708,069...3,742,845
Ensembl chrNW_004936475:3,713,362...3,745,982 		JBrowse link
G Nos2 nitric oxide synthase 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12933833) Ensembl
MGI		 PMID:12933833 GO_REF:0000107 NCBI chrNW_004936538:4,052,277...4,097,051
Ensembl chrNW_004936538:4,052,448...4,097,051 		JBrowse link
G Nr1h4 nuclear receptor subfamily 1 group H member 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936492:13,315,265...13,365,186
Ensembl chrNW_004936492:13,315,265...13,374,034 		JBrowse link
G Oas3 2'-5'-oligoadenylate synthetase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936668:2,917,978...2,965,336
Ensembl chrNW_004936668:2,950,124...2,962,572
Ensembl chrNW_004936668:2,950,124...2,962,572 		JBrowse link
G Pglyrp1 peptidoglycan recognition protein 1 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936706:2,317,137...2,320,993
Ensembl chrNW_004936706:2,315,132...2,320,796 		JBrowse link
G Pla2g2a phospholipase A2 group IIA involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936474:6,091,978...6,095,961
Ensembl chrNW_004936474:6,091,941...6,096,057 		JBrowse link
G Plac8 placenta associated 8 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17404296) Ensembl
MGI		 PMID:17404296 GO_REF:0000107 NCBI chrNW_004936738:1,484,905...1,503,181
Ensembl chrNW_004936738:1,484,859...1,503,302 		JBrowse link
G Prkcd protein kinase C delta involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936473:3,892,625...3,923,467
Ensembl chrNW_004936473:3,892,366...3,923,515 		JBrowse link
G Rab14 RAB14, member RAS oncogene family involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936487:9,675,517...9,699,469
Ensembl chrNW_004936487:9,673,487...9,690,654 		JBrowse link
G Rab1a RAB1A, member RAS oncogene family involved_in ISO (PMID:22939626) UniProt PMID:22939626 NCBI chrNW_004936491:9,858,645...9,891,674 JBrowse link
G Rag2 recombination activating 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:14766966) Ensembl
MGI		 PMID:14766966 GO_REF:0000107 NCBI chrNW_004936533:1,801,207...1,807,431
Ensembl chrNW_004936533:1,801,391...1,807,431 		JBrowse link
G Rbck1 RANBP2-type and C3HC4-type zinc finger containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936485:18,057,569...18,071,787
Ensembl chrNW_004936485:18,057,534...18,071,816 		JBrowse link
G Rbpj recombination signal binding protein for immunoglobulin kappa J region involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11967543) Ensembl
MGI		 PMID:11967543 GO_REF:0000107 NCBI chrNW_004936477:3,354,336...3,445,248
Ensembl chrNW_004936477:3,349,627...3,461,797 		JBrowse link
G Ripk2 receptor interacting serine/threonine kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936544:3,606,925...3,653,248
Ensembl chrNW_004936544:3,606,879...3,655,532 		JBrowse link
G Rnase6 ribonuclease A family member k6 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936880:78,532...79,342
Ensembl chrNW_004936880:78,081...79,021 		JBrowse link
G Rnf213 ring finger protein 213 involved_in ISO (MGI:6729754|PMID:34012115)
(PMID:34012115)		 UniProt PMID:34012115 MGI:6729754 NCBI chrNW_004936594:4,241,006...4,331,841
Ensembl chrNW_004936594:4,241,396...4,331,868 		JBrowse link
G Rnf31 ring finger protein 31 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936722:385,972...397,718
Ensembl chrNW_004936722:385,971...398,030 		JBrowse link
G Romo1 reactive oxygen species modulator 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936561:5,134,068...5,135,734
Ensembl chrNW_004936561:5,134,015...5,135,748 		JBrowse link
G S100a14 S100 calcium binding protein A14 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936580:3,414,315...3,416,335
Ensembl chrNW_004936580:3,414,296...3,416,393 		JBrowse link
G Sharpin SHANK associated RH domain interactor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936470:8,076,605...8,081,872
Ensembl chrNW_004936470:8,077,019...8,086,600 		JBrowse link
G Shc1 SHC adaptor protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936580:4,511,560...4,522,003
Ensembl chrNW_004936580:4,512,680...4,519,715 		JBrowse link
G Slamf8 SLAM family member 8 acts_upstream_of_or_within ISO (PMID:22593622) MGI PMID:22593622 NCBI chrNW_004936740:776,557...786,182
Ensembl chrNW_004936740:776,455...786,357 		JBrowse link
G Slamf9 SLAM family member 9 acts_upstream_of_or_within ISO (PMID:31880316) MGI PMID:31880316 NCBI chrNW_004936740:661,663...665,166
Ensembl chrNW_004936740:661,619...665,186 		JBrowse link
G Slc11a1 solute carrier family 11 member 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:1541907), (PMID:18045875), (PMID:385184)
(PMID:7650477)
(PMID:18285491)		 Ensembl
MGI		 PMID:385184 PMID:1541907 PMID:7650477 PMID:18045875 PMID:18285491 GO_REF:0000107 NCBI chrNW_004936569:888,309...895,991
Ensembl chrNW_004936569:887,742...895,977 		JBrowse link
G Slc30a1 solute carrier family 30 member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936557:1,789,263...1,796,548
Ensembl chrNW_004936557:1,789,263...1,796,541 		JBrowse link
G Slc9a9 solute carrier family 9 member A9 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936540:4,843,798...5,384,305
Ensembl chrNW_004936540:4,845,212...5,384,170 		JBrowse link
G Spn sialophorin acts_upstream_of_or_within ISO (PMID:10899905) MGI PMID:10899905 NCBI chrNW_004936501:12,773,967...12,776,642 JBrowse link
G Spon2 spondin 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:14691481) Ensembl
MGI		 PMID:14691481 GO_REF:0000107 NCBI chrNW_004936477:22,087,450...22,093,677
Ensembl chrNW_004936477:22,087,394...22,093,723 		JBrowse link
G Stab1 stabilin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936473:3,333,988...3,363,256
Ensembl chrNW_004936473:3,334,032...3,363,117 		JBrowse link
G Stab2 stabilin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936492:10,678,074...10,817,870
Ensembl chrNW_004936492:10,678,115...10,833,963 		JBrowse link
G Syk spleen associated tyrosine kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936780:1,553,605...1,601,036
Ensembl chrNW_004936780:1,553,605...1,598,158 		JBrowse link
G Tab2 TGF-beta activated kinase 1 (MAP3K7) binding protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936489:2,371,953...2,421,882
Ensembl chrNW_004936489:2,372,216...2,424,515 		JBrowse link
G Tab3 TGF-beta activated kinase 1 (MAP3K7) binding protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936553:6,860,435...6,917,796
Ensembl chrNW_004936553:6,860,261...6,885,475 		JBrowse link
G Tlr4 toll like receptor 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936487:6,519,140...6,532,018
Ensembl chrNW_004936487:6,518,441...6,533,095 		JBrowse link
G Tmf1 TATA element modulatory factor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22553199) Ensembl
MGI		 PMID:22553199 GO_REF:0000107 NCBI chrNW_004936603:1,577,519...1,602,022
Ensembl chrNW_004936603:1,577,486...1,602,250 		JBrowse link
G Tnf tumor necrosis factor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10899905) Ensembl
MGI		 PMID:10899905 GO_REF:0000107 NCBI chrNW_004936727:1,936,066...1,937,766
Ensembl chrNW_004936727:1,936,066...1,937,766 		JBrowse link
G Tnfrsf1a TNF receptor superfamily member 1A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9324362) Ensembl
MGI		 PMID:9324362 GO_REF:0000107 NCBI chrNW_004936709:1,407,327...1,421,448
Ensembl chrNW_004936709:1,407,278...1,421,921 		JBrowse link
G Trem2 triggering receptor expressed on myeloid cells 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936476:18,659,725...18,665,406
Ensembl chrNW_004936476:18,659,815...18,663,940 		JBrowse link
G Xiap X-linked inhibitor of apoptosis involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936479:6,677,533...6,724,800
Ensembl chrNW_004936479:6,677,526...6,722,116 		JBrowse link
G Znfx1 zinc finger NFX1-type containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936514:4,964,844...4,992,004
Ensembl chrNW_004936514:4,966,172...4,988,922 		JBrowse link
antibacterial humoral response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ang angiogenin involved_in ISO (MGI:2652649|PMID:12548285) UniProt PMID:12548285 MGI:2652649 NCBI chrNW_004936880:39,372...40,070 JBrowse link
G App amyloid beta precursor protein involved_in ISO PMID:20209079 UniProt PMID:20209079 RGD:10400853 NCBI chrNW_004936640:1,549,977...1,787,436
Ensembl chrNW_004936640:1,550,167...1,787,286 		JBrowse link
G Fau FAU ubiquitin like and ribosomal protein S30 fusion involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936599:4,246,681...4,248,142
Ensembl chrNW_004936599:4,246,676...4,248,141 		JBrowse link
G Jchain joining chain of multimeric IgA and IgM involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936598:4,061,827...4,140,895
Ensembl chrNW_004936598:4,099,201...4,109,187 		JBrowse link
G LOC101959956 cathepsin G-like involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936722:34,410...37,097
Ensembl chrNW_004936722:34,392...37,097 		JBrowse link
G LOC101960095 antileukoproteinase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936514:7,618,382...7,620,790
Ensembl chrNW_004936514:7,618,261...7,620,912 		JBrowse link
G LOC101962700 cathelicidin antimicrobial peptide-like involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936596:1,711,313...1,713,213
Ensembl chrNW_004936596:1,711,246...1,713,234 		JBrowse link
G LOC101967584 histone H2B type 2-E involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936580:217,772...220,559
Ensembl chrNW_004936580:220,118...220,498 		JBrowse link
G LOC101970831 serotransferrin involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936529:6,917,762...6,947,512
Ensembl chrNW_004936529:6,855,958...6,947,394 		JBrowse link
G LOC106145530 sperm-associated antigen 11-like involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004937117:125,303...128,754 JBrowse link
G Ltf lactotransferrin involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936596:344,287...373,788
Ensembl chrNW_004936596:344,274...373,952 		JBrowse link
G Pla2g1b phospholipase A2 group IB involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936668:608,848...616,982
Ensembl chrNW_004936668:610,716...616,982 		JBrowse link
G Pla2g6 phospholipase A2 group VI involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936492:3,011,752...3,060,962
Ensembl chrNW_004936492:3,011,772...3,060,986 		JBrowse link
G Rnase4 ribonuclease A family member 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936880:41,940...42,988
Ensembl chrNW_004936880:34,289...43,209 		JBrowse link
G Rnase6 ribonuclease A family member k6 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936880:78,532...79,342
Ensembl chrNW_004936880:78,081...79,021 		JBrowse link
antibacterial innate immune response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC101958024 mucin-19 acts_upstream_of_or_within ISO (PMID:25512380) MGI PMID:25512380 NCBI chrNW_004936607:418,290...443,988 JBrowse link
G Mpeg1 macrophage expressed 1 involved_in
NOT|involved_in		 ISO (MGI:6208630|PMID:26402460)
(MGI:7539255|PMID:35471730)		 UniProt PMID:26402460 PMID:35471730 MGI:6208630 MGI:7539255 NCBI chrNW_004936581:3,428,515...3,436,877
Ensembl chrNW_004936581:3,421,256...3,431,706 		JBrowse link
G Nfkb1 nuclear factor kappa B subunit 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936520:733,760...850,563
Ensembl chrNW_004936520:733,668...829,435 		JBrowse link
G Nod2 nucleotide binding oligomerization domain containing 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936475:3,708,069...3,742,845
Ensembl chrNW_004936475:3,713,362...3,745,982 		JBrowse link
G Slc15a2 solute carrier family 15 member 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936536:8,280,537...8,316,011
Ensembl chrNW_004936536:8,280,448...8,316,064 		JBrowse link
G Tfeb transcription factor EB involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936476:18,189,096...18,233,622
Ensembl chrNW_004936476:18,189,041...18,233,701 		JBrowse link
G Umod uromodulin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936501:5,833,391...5,846,021
Ensembl chrNW_004936501:5,833,391...5,846,164 		JBrowse link
antibacterial peptide biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lgals4 galectin 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:27427436) Ensembl
MGI		 PMID:27427436 GO_REF:0000107 NCBI chrNW_004936661:1,772,394...1,780,590
Ensembl chrNW_004936661:1,772,075...1,779,626 		JBrowse link
G Mmp7 matrix metallopeptidase 7 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20056603) Ensembl
MGI		 PMID:20056603 GO_REF:0000107 NCBI chrNW_004936551:5,388,456...5,395,071
Ensembl chrNW_004936551:5,388,459...5,395,071 		JBrowse link
antibacterial peptide secretion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mmp7 matrix metallopeptidase 7 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11248802) Ensembl
MGI		 PMID:11248802 GO_REF:0000107 NCBI chrNW_004936551:5,388,456...5,395,071
Ensembl chrNW_004936551:5,388,459...5,395,071 		JBrowse link
biosynthetic process of antibacterial peptides active against Gram-negative bacteria term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC101961846 neutrophil elastase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936588:345,678...347,420
Ensembl chrNW_004936588:345,678...347,413 		JBrowse link
biosynthetic process of antibacterial peptides active against Gram-positive bacteria term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nod2 nucleotide binding oligomerization domain containing 2 involved_in
acts_upstream_of		 IEA
ISO		 (PMID:15692051) Ensembl
MGI		 PMID:15692051 GO_REF:0000107 NCBI chrNW_004936475:3,708,069...3,742,845
Ensembl chrNW_004936475:3,713,362...3,745,982 		JBrowse link
defense response to Gram-negative bacterium term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G App amyloid beta precursor protein involved_in ISO PMID:20209079 UniProt PMID:20209079 RGD:10400853 NCBI chrNW_004936640:1,549,977...1,787,436
Ensembl chrNW_004936640:1,550,167...1,787,286 		JBrowse link
G Aqp1 aquaporin 1 (Colton blood group) involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936478:7,146,997...7,160,369
Ensembl chrNW_004936478:7,147,027...7,160,401 		JBrowse link
G Bpi bactericidal permeability increasing protein involved_in IEA UniProt
TreeGrafter		 GO_REF:0000104 GO_REF:0000118 NCBI chrNW_004936561:3,043,520...3,069,680
Ensembl chrNW_004936561:3,043,578...3,069,689 		JBrowse link
G Bpifc BPI fold containing family C involved_in IEA UniProt GO_REF:0000104 NCBI chrNW_004936492:7,299,085...7,332,518
Ensembl chrNW_004936492:7,299,085...7,332,518 		JBrowse link
G Cd160 CD160 molecule acts_upstream_of_or_within ISO (PMID:22801499) MGI PMID:22801499 NCBI chrNW_004936867:478,625...485,905 JBrowse link
G Cd4 CD4 molecule involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:14688352) Ensembl
MGI		 PMID:14688352 GO_REF:0000107 NCBI chrNW_004936709:997,776...1,022,791
Ensembl chrNW_004936709:997,750...1,022,884 		JBrowse link
G Chga chromogranin A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936733:915,700...927,220
Ensembl chrNW_004936733:915,830...927,409 		JBrowse link
G Cst11 cystatin 11 involved_in IEA Ensembl
TreeGrafter
InterPro		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936620:2,115,927...2,119,683
Ensembl chrNW_004936620:2,115,924...2,119,639 		JBrowse link
G Defb1 defensin beta 1 involved_in ISO (PMID:25122636) UniProt PMID:25122636 NCBI chrNW_004936615:4,780,229...4,790,516 JBrowse link
G Defb128 defensin beta 128 involved_in ISO (PMID:15625724) UniProt PMID:15625724 NCBI chrNW_004936485:18,238,442...18,240,625 JBrowse link
G Drosha drosha ribonuclease III involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936518:9,100,094...9,218,405
Ensembl chrNW_004936518:9,106,142...9,219,174 		JBrowse link
G Gsdmb gasdermin B involved_in ISO (PMID:34022140) UniProt PMID:34022140 NCBI chrNW_004936490:15,058,009...15,066,781 JBrowse link
G Gsdmd gasdermin D involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936470:8,567,085...8,571,448
Ensembl chrNW_004936470:8,567,091...8,571,467 		JBrowse link
G Hmgb2 high mobility group box 2 involved_in ISS
IEA		 AgBase
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chrNW_004936516:4,536,664...4,539,331
Ensembl chrNW_004936516:4,534,306...4,539,387 		JBrowse link
G Il12b interleukin 12B involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936515:4,056,214...4,066,121
Ensembl chrNW_004936515:4,056,214...4,065,076 		JBrowse link
G Il17a interleukin 17A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936476:8,621,860...8,625,008
Ensembl chrNW_004936476:8,621,860...8,625,008 		JBrowse link
G Il17f interleukin 17F involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936476:8,579,282...8,580,916
Ensembl chrNW_004936476:8,574,387...8,580,916 		JBrowse link
G Il22ra1 interleukin 22 receptor subunit alpha 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22801499) Ensembl
MGI		 PMID:22801499 GO_REF:0000107 NCBI chrNW_004936474:9,184,559...9,201,918
Ensembl chrNW_004936474:9,184,559...9,201,918 		JBrowse link
G Il23a interleukin 23 subunit alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936646:743,630...745,998
Ensembl chrNW_004936646:743,688...745,836 		JBrowse link
G Lalba lactalbumin alpha involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936512:6,480,955...6,482,725
Ensembl chrNW_004936512:6,480,955...6,482,725 		JBrowse link
G Lbp lipopolysaccharide binding protein involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12055258) Ensembl
MGI
TreeGrafter
UniProt		 PMID:12055258 GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936561:3,017,471...3,035,481
Ensembl chrNW_004936561:3,016,926...3,035,552 		JBrowse link
G LOC101954543 caspase-1-like involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936551:3,230,060...3,240,496 JBrowse link
G LOC101958779 lysozyme C-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936545:7,134,214...7,138,573
Ensembl chrNW_004936545:7,134,165...7,170,474 		JBrowse link
G LOC101959058 lysozyme C involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936545:7,151,591...7,157,908
Ensembl chrNW_004936545:7,134,165...7,170,474 		JBrowse link
G LOC101959346 lysozyme C involved_in ISO
IEA		 RGD
TreeGrafter		 PMID:2840982 GO_REF:0000118 RGD:1599862 NCBI chrNW_004936545:7,165,917...7,170,840
Ensembl chrNW_004936545:7,134,165...7,170,474 		JBrowse link
G LOC101959402 deleted in malignant brain tumors 1 protein involved_in ISO (MGI:2670828|PMID:12884308) UniProt PMID:12884308 MGI:2670828 NCBI chrNW_004936486:11,377,485...11,545,624 JBrowse link
G LOC101959956 cathepsin G-like involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936722:34,410...37,097
Ensembl chrNW_004936722:34,392...37,097 		JBrowse link
G LOC101960934 ribonuclease 7 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936880:261,215...261,700 JBrowse link
G LOC101961439 twinfilin-2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936529:3,538,813...3,555,562
Ensembl chrNW_004936529:3,538,862...3,555,593 		JBrowse link
G LOC101961563 neutrophilic granule protein-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936596:1,074,837...1,078,480 JBrowse link
G LOC101962700 cathelicidin antimicrobial peptide-like involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936596:1,711,313...1,713,213
Ensembl chrNW_004936596:1,711,246...1,713,234 		JBrowse link
G LOC101964702 adhesion G protein-coupled receptor B1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936470:9,247,749...9,313,230
Ensembl chrNW_004936470:9,248,319...9,313,230 		JBrowse link
G LOC101972633 major histocompatibility complex class I-related gene protein involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21190736) Ensembl
MGI		 PMID:21190736 GO_REF:0000107 NCBI chrNW_004936481:8,325,918...8,347,941
Ensembl chrNW_004936481:8,327,690...8,347,960 		JBrowse link
G LOC101972667 immunity related GTPase M involved_in ISO (PMID:25891078) UniProt PMID:25891078 NCBI chrNW_004936504:4,055,091...4,056,089 JBrowse link
G LOC106145141 protein RoBo-1 involved_in ISO (MGI:5779978|PMID:27027293) UniProt PMID:27027293 MGI:5779978 NCBI chrNW_004936609:339,319...342,625 JBrowse link
G Ltf lactotransferrin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936596:344,287...373,788
Ensembl chrNW_004936596:344,274...373,952 		JBrowse link
G Lyzl4 lysozyme like 4 NOT|involved_in ISO PMID:22110709 UniProt PMID:22110709 RGD:12793004 NCBI chrNW_004936695:2,668,444...2,674,605
Ensembl chrNW_004936695:2,668,444...2,674,605 		JBrowse link
G Mmp7 matrix metallopeptidase 7 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11248802) Ensembl
MGI		 PMID:11248802 GO_REF:0000107 NCBI chrNW_004936551:5,388,456...5,395,071
Ensembl chrNW_004936551:5,388,459...5,395,071 		JBrowse link
G Mpeg1 macrophage expressed 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936581:3,428,515...3,436,877
Ensembl chrNW_004936581:3,421,256...3,431,706 		JBrowse link
G Nfkbiz NFKB inhibitor zeta involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936630:1,601,006...1,633,844
Ensembl chrNW_004936630:1,601,010...1,632,745 		JBrowse link
G Nod1 nucleotide binding oligomerization domain containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936478:6,717,354...6,768,293
Ensembl chrNW_004936478:6,715,245...6,768,372 		JBrowse link
G Nos2 nitric oxide synthase 2 ISO RGD PMID:16865779 RGD:1582113 NCBI chrNW_004936538:4,052,277...4,097,051
Ensembl chrNW_004936538:4,052,448...4,097,051 		JBrowse link
G Optn optineurin involved_in ISO (PMID:21617041) UniProt PMID:21617041 NCBI chrNW_004937104:73,340...113,179 JBrowse link
G Peli3 pellino E3 ubiquitin protein ligase family member 3 acts_upstream_of_or_within ISO (PMID:23892723) MGI PMID:23892723 NCBI chrNW_004936599:3,099,256...3,110,566
Ensembl chrNW_004936599:3,099,256...3,110,565 		JBrowse link
G Prkd1 protein kinase D1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936494:4,469,092...4,601,183
Ensembl chrNW_004936494:4,469,089...4,601,214 		JBrowse link
G Pycard PYD and CARD domain containing involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936501:13,550,702...13,552,774
Ensembl chrNW_004936501:13,550,679...13,552,805 		JBrowse link
G Rarres2 retinoic acid receptor responder 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936527:5,949,161...5,952,367
Ensembl chrNW_004936527:5,947,960...5,952,579 		JBrowse link
G Reg3g regenerating family member 3 gamma involved_in ISO (MGI:5897756|PMID:16931762) UniProt PMID:16931762 MGI:5897756 NCBI chrNW_004936556:4,896,141...4,898,240 JBrowse link
G Rnase6 ribonuclease A family member k6 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936880:78,532...79,342
Ensembl chrNW_004936880:78,081...79,021 		JBrowse link
G Romo1 reactive oxygen species modulator 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936561:5,134,068...5,135,734
Ensembl chrNW_004936561:5,134,015...5,135,748 		JBrowse link
G Rps19 ribosomal protein S19 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936706:568,443...575,973
Ensembl chrNW_004936706:568,364...575,126 		JBrowse link
G Serpine1 serpin family E member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936543:1,032,543...1,040,956
Ensembl chrNW_004936543:1,032,794...1,039,123 		JBrowse link
G Slc11a1 solute carrier family 11 member 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:6358358) Ensembl
MGI		 PMID:6358358 GO_REF:0000107 NCBI chrNW_004936569:888,309...895,991
Ensembl chrNW_004936569:887,742...895,977 		JBrowse link
G Ssc5d scavenger receptor cysteine rich family member with 5 domains involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936886:715,159...734,428
Ensembl chrNW_004936886:715,253...734,484 		JBrowse link
G Tfeb transcription factor EB involved_in ISO (MGI:5787845|PMID:27184844) UniProt PMID:27184844 MGI:5787845 NCBI chrNW_004936476:18,189,096...18,233,622
Ensembl chrNW_004936476:18,189,041...18,233,701 		JBrowse link
G Tlr4 toll like receptor 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15661922) Ensembl
MGI
TreeGrafter		 PMID:15661922 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936487:6,519,140...6,532,018
Ensembl chrNW_004936487:6,518,441...6,533,095 		JBrowse link
G Tnfrsf14 TNF receptor superfamily member 14 acts_upstream_of_or_within ISO (PMID:22801499) MGI PMID:22801499 NCBI chrNW_004936737:1,008,228...1,013,575 JBrowse link
G Trem2 triggering receptor expressed on myeloid cells 2 acts_upstream_of_or_within_positive_effect
involved_in		 ISO
IEA		 (MGI:6391726|PMID:29887864) ARUK-UCL
Ensembl		 PMID:29887864 GO_REF:0000107 MGI:6391726 NCBI chrNW_004936476:18,659,725...18,665,406
Ensembl chrNW_004936476:18,659,815...18,663,940 		JBrowse link
G Tslp thymic stromal lymphopoietin involved_in ISO (PMID:24850429) UniProt PMID:24850429 NCBI chrNW_004936531:5,495,872...5,500,462 JBrowse link
G TUSC2 tumor suppressor 2, mitochondrial calcium regulator involved_in IEA Ensembl GO_REF:0000107 Ensembl chrNW_004936529:1,853,120...1,856,637 JBrowse link
G Umod uromodulin involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:14665435), (PMID:14871399) Ensembl
MGI		 PMID:14665435 PMID:14871399 GO_REF:0000107 NCBI chrNW_004936501:5,833,391...5,846,021
Ensembl chrNW_004936501:5,833,391...5,846,164 		JBrowse link
defense response to Gram-positive bacterium term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acp5 acid phosphatase 5, tartrate resistant involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11168643) Ensembl
MGI		 PMID:11168643 GO_REF:0000107 NCBI chrNW_004936659:1,598,252...1,642,615
Ensembl chrNW_004936659:1,598,177...1,600,262 		JBrowse link
G Adam17 ADAM metallopeptidase domain 17 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936532:5,864,851...5,904,005
Ensembl chrNW_004936532:5,864,867...5,904,003 		JBrowse link
G Ang angiogenin involved_in ISO (MGI:2652649|PMID:12548285) UniProt PMID:12548285 MGI:2652649 NCBI chrNW_004936880:39,372...40,070 JBrowse link
G App amyloid beta precursor protein involved_in ISO PMID:20209079 UniProt PMID:20209079 RGD:10400853 NCBI chrNW_004936640:1,549,977...1,787,436
Ensembl chrNW_004936640:1,550,167...1,787,286 		JBrowse link
G C5ar1 complement C5a receptor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17114491) Ensembl
MGI		 PMID:17114491 GO_REF:0000107 NCBI chrNW_004936664:1,026,216...1,033,438
Ensembl chrNW_004936664:1,032,304...1,033,374 		JBrowse link
G Card9 caspase recruitment domain family member 9 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17187069) Ensembl
MGI		 PMID:17187069 GO_REF:0000107 NCBI chrNW_004936669:1,428,208...1,438,012
Ensembl chrNW_004936669:1,429,594...1,438,005 		JBrowse link
G Cd36 CD36 molecule (CD36 blood group) involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16061696)
(PMID:15690042)		 Ensembl
MGI		 PMID:15690042 PMID:16061696 GO_REF:0000107 NCBI chrNW_004936810:791,823...838,303
Ensembl chrNW_004936810:758,182...838,365 		JBrowse link
G Chga chromogranin A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936733:915,700...927,220
Ensembl chrNW_004936733:915,830...927,409 		JBrowse link
G Defb1 defensin beta 1 involved_in ISO (PMID:25122636) UniProt PMID:25122636 NCBI chrNW_004936615:4,780,229...4,790,516 JBrowse link
G Defb128 defensin beta 128 involved_in ISO (PMID:15625724) UniProt PMID:15625724 NCBI chrNW_004936485:18,238,442...18,240,625 JBrowse link
G Drosha drosha ribonuclease III involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936518:9,100,094...9,218,405
Ensembl chrNW_004936518:9,106,142...9,219,174 		JBrowse link
G Epha2 EPH receptor A2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19443703) Ensembl
MGI		 PMID:19443703 GO_REF:0000107 NCBI chrNW_004936474:3,648,395...3,673,856
Ensembl chrNW_004936474:3,648,550...3,673,861 		JBrowse link
G Fau FAU ubiquitin like and ribosomal protein S30 fusion involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936599:4,246,681...4,248,142
Ensembl chrNW_004936599:4,246,676...4,248,141 		JBrowse link
G Fgr FGR proto-oncogene, Src family tyrosine kinase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:8125254) Ensembl
MGI		 PMID:8125254 GO_REF:0000107 NCBI chrNW_004936474:11,897,998...11,919,153
Ensembl chrNW_004936474:11,896,914...11,919,190 		JBrowse link
G Gpr15lg G protein-coupled receptor 15 ligand involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936767:790,152...798,265
Ensembl chrNW_004936767:790,676...798,265 		JBrowse link
G Gsdmd gasdermin D involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936470:8,567,085...8,571,448
Ensembl chrNW_004936470:8,567,091...8,571,467 		JBrowse link
G Havcr2 hepatitis A virus cellular receptor 2 involved_in ISO (MGI:5568873|PMID:24567532) UniProt PMID:24567532 MGI:5568873 NCBI chrNW_004936515:6,001,324...6,015,407 JBrowse link
G Hck HCK proto-oncogene, Src family tyrosine kinase acts_upstream_of_or_within ISO (PMID:8125254) MGI PMID:8125254 NCBI chrNW_004936485:18,996,016...19,017,908
Ensembl chrNW_004936485:18,978,412...19,017,908 		JBrowse link
G Hmgb2 high mobility group box 2 involved_in ISS
IEA		 AgBase
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chrNW_004936516:4,536,664...4,539,331
Ensembl chrNW_004936516:4,534,306...4,539,387 		JBrowse link
G Ifng interferon gamma acts_upstream_of_or_within ISO (PMID:30248149) MGI PMID:30248149 NCBI chrNW_004936545:6,139,130...6,144,543
Ensembl chrNW_004936545:6,139,116...6,148,452 		JBrowse link
G Il12a interleukin 12A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936519:6,166,060...6,180,652
Ensembl chrNW_004936519:6,175,261...6,180,396 		JBrowse link
G Il17a interleukin 17A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936476:8,621,860...8,625,008
Ensembl chrNW_004936476:8,621,860...8,625,008 		JBrowse link
G Il17f interleukin 17F involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936476:8,579,282...8,580,916
Ensembl chrNW_004936476:8,574,387...8,580,916 		JBrowse link
G Il18 interleukin 18 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936612:2,306,963...2,325,086
Ensembl chrNW_004936612:2,306,875...2,325,189 		JBrowse link
G Il1b interleukin 1 beta involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936783:1,251,678...1,256,807
Ensembl chrNW_004936783:1,252,158...1,257,165 		JBrowse link
G Il27ra interleukin 27 receptor subunit alpha involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11057672) Ensembl
MGI		 PMID:11057672 GO_REF:0000107 NCBI chrNW_004936659:2,706,037...2,720,486
Ensembl chrNW_004936659:2,705,985...2,722,748 		JBrowse link
G Il7r interleukin 7 receptor involved_in ISO (MGI:4459373|PMID:20364087) UniProt PMID:20364087 MGI:4459373 NCBI chrNW_004936518:5,815,820...5,842,571 JBrowse link
G Krt6a keratin 6A involved_in ISO (MGI:5466437|PMID:23006328) UniProt PMID:23006328 MGI:5466437 NCBI chrNW_004936512:9,903,206...9,908,009 JBrowse link
G Lalba lactalbumin alpha involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936512:6,480,955...6,482,725
Ensembl chrNW_004936512:6,480,955...6,482,725 		JBrowse link
G Lbp lipopolysaccharide binding protein involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936561:3,017,471...3,035,481
Ensembl chrNW_004936561:3,016,926...3,035,552 		JBrowse link
G LOC101958740 non-secretory ribonuclease-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936880:143,124...157,650 JBrowse link
G LOC101958779 lysozyme C-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936545:7,134,214...7,138,573
Ensembl chrNW_004936545:7,134,165...7,170,474 		JBrowse link
G LOC101959058 lysozyme C involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936545:7,151,591...7,157,908
Ensembl chrNW_004936545:7,134,165...7,170,474 		JBrowse link
G LOC101959346 lysozyme C involved_in ISO
IEA		 RGD
TreeGrafter		 PMID:2840982 GO_REF:0000118 RGD:1599862 NCBI chrNW_004936545:7,165,917...7,170,840
Ensembl chrNW_004936545:7,134,165...7,170,474 		JBrowse link
G LOC101959402 deleted in malignant brain tumors 1 protein involved_in ISO (MGI:2670828|PMID:12884308) UniProt PMID:12884308 MGI:2670828 NCBI chrNW_004936486:11,377,485...11,545,624 JBrowse link
G LOC101959956 cathepsin G-like involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936722:34,410...37,097
Ensembl chrNW_004936722:34,392...37,097 		JBrowse link
G LOC101960934 ribonuclease 7 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936880:261,215...261,700 JBrowse link
G LOC101961563 neutrophilic granule protein-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936596:1,074,837...1,078,480 JBrowse link
G LOC101962700 cathelicidin antimicrobial peptide-like involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936596:1,711,313...1,713,213
Ensembl chrNW_004936596:1,711,246...1,713,234 		JBrowse link
G LOC101964473 caspase-4-like involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936551:3,242,381...3,269,821 JBrowse link
G LOC101965615 non-secretory ribonuclease-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936880:165,178...165,654 JBrowse link
G LOC101967584 histone H2B type 2-E involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936580:217,772...220,559
Ensembl chrNW_004936580:220,118...220,498 		JBrowse link
G LOC101970371 peptidoglycan recognition protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936580:3,184,904...3,197,203
Ensembl chrNW_004936580:3,184,904...3,194,319 		JBrowse link
G LOC101972633 major histocompatibility complex class I-related gene protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936481:8,325,918...8,347,941
Ensembl chrNW_004936481:8,327,690...8,347,960 		JBrowse link
G LOC101974774 peptidoglycan recognition protein 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936580:3,206,557...3,214,790
Ensembl chrNW_004936580:3,207,350...3,218,643 		JBrowse link
G LOC101976242 NKG2-D type II integral membrane protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936902:216,495...229,150
Ensembl chrNW_004936902:216,495...229,141 		JBrowse link
G LOC101977501 mannose-binding protein A-like involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936716:89,232...91,728 JBrowse link
G LOC110597159 non-secretory ribonuclease-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936880:143,369...143,871 JBrowse link
G Lta lymphotoxin alpha involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9834074) Ensembl
MGI		 PMID:9834074 GO_REF:0000107 NCBI chrNW_004936727:1,940,081...1,941,022
Ensembl chrNW_004936727:1,940,081...1,941,022 		JBrowse link
G Lyg1 lysozyme g1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936661:1,524,677...1,533,110
Ensembl chrNW_004936661:1,527,259...1,533,110 		JBrowse link
G Lyg2 lysozyme g2 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936661:1,589,105...1,597,713
Ensembl chrNW_004936661:1,589,105...1,597,666 		JBrowse link
G Mmp7 matrix metallopeptidase 7 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11248802) Ensembl
MGI		 PMID:11248802 GO_REF:0000107 NCBI chrNW_004936551:5,388,456...5,395,071
Ensembl chrNW_004936551:5,388,459...5,395,071 		JBrowse link
G Mpeg1 macrophage expressed 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936581:3,428,515...3,436,877
Ensembl chrNW_004936581:3,421,256...3,431,706 		JBrowse link
G Mpo myeloperoxidase NOT|acts_upstream_of_or_within ISO (PMID:10085024) MGI PMID:10085024 NCBI chrNW_004936490:4,809,773...4,819,070
Ensembl chrNW_004936490:4,809,631...4,819,070 		JBrowse link
G Myd88 MYD88 innate immune signal transduction adaptor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11067888) Ensembl
MGI
TreeGrafter		 PMID:11067888 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936473:27,672,237...27,676,339
Ensembl chrNW_004936473:27,671,797...27,676,372 		JBrowse link
G Myo1f myosin IF acts_upstream_of_or_within ISO (PMID:17023661) MGI PMID:17023661 NCBI chrNW_004936588:5,299,977...5,331,065
Ensembl chrNW_004936588:5,302,018...5,336,345 		JBrowse link
G Ncf1 neutrophil cytosolic factor 1 acts_upstream_of_or_within ISO (PMID:11907569) MGI PMID:11907569 NCBI chrNW_004936543:3,617,369...3,630,990
Ensembl chrNW_004936543:3,617,372...3,630,997 		JBrowse link
G Nlrp3 NLR family pyrin domain containing 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936864:709,693...732,119
Ensembl chrNW_004936864:709,709...731,718 		JBrowse link
G Nlrp6 NLR family pyrin domain containing 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936888:145,642...151,716
Ensembl chrNW_004936888:145,642...151,182 		JBrowse link
G Nod1 nucleotide binding oligomerization domain containing 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18261938) Ensembl
MGI		 PMID:18261938 GO_REF:0000107 NCBI chrNW_004936478:6,717,354...6,768,293
Ensembl chrNW_004936478:6,715,245...6,768,372 		JBrowse link
G Nod2 nucleotide binding oligomerization domain containing 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15692051), (PMID:18261938), (PMID:19139201)
(PMID:18261938)		 Ensembl
MGI		 PMID:15692051 PMID:18261938 PMID:19139201 GO_REF:0000107 NCBI chrNW_004936475:3,708,069...3,742,845
Ensembl chrNW_004936475:3,713,362...3,745,982 		JBrowse link
G P2rx7 purinergic receptor P2X 7 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11544318) Ensembl
MGI		 PMID:11544318 GO_REF:0000107 NCBI chrNW_004936558:3,106,819...3,149,689
Ensembl chrNW_004936558:3,108,283...3,149,765 		JBrowse link
G Pglyrp1 peptidoglycan recognition protein 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936706:2,317,137...2,320,993
Ensembl chrNW_004936706:2,315,132...2,320,796 		JBrowse link
G Pglyrp2 peptidoglycan recognition protein 2 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936596:5,038,452...5,043,172
Ensembl chrNW_004936596:5,038,452...5,044,569 		JBrowse link
G Pla2g1b phospholipase A2 group IB involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936668:608,848...616,982
Ensembl chrNW_004936668:610,716...616,982 		JBrowse link
G Pla2g2a phospholipase A2 group IIA involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:6,091,978...6,095,961
Ensembl chrNW_004936474:6,091,941...6,096,057 		JBrowse link
G Pld1 phospholipase D1 acts_upstream_of_or_within ISO (PMID:11544318) MGI PMID:11544318 NCBI chrNW_004936593:844,634...1,049,478
Ensembl chrNW_004936593:930,637...1,046,821 		JBrowse link
G Ppp1r11 protein phosphatase 1 regulatory inhibitor subunit 11 involved_in ISO (MGI:6094454|PMID:27805901) UniProt PMID:27805901 MGI:6094454 NCBI chrNW_004936723:973,516...975,930
Ensembl chrNW_004936723:970,226...975,952 		JBrowse link
G Pycard PYD and CARD domain containing involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:30248149) Ensembl
MGI		 PMID:30248149 GO_REF:0000107 NCBI chrNW_004936501:13,550,702...13,552,774
Ensembl chrNW_004936501:13,550,679...13,552,805 		JBrowse link
G Rarres2 retinoic acid receptor responder 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936527:5,949,161...5,952,367
Ensembl chrNW_004936527:5,947,960...5,952,579 		JBrowse link
G Reg3g regenerating family member 3 gamma involved_in ISO (MGI:5488544|PMID:23401489), (MGI:5897756|PMID:16931762)
(MGI:3760234|PMID:17635956)		 UniProt PMID:16931762 PMID:17635956 PMID:23401489 MGI:3760234 MGI:5488544 MGI:5897756 NCBI chrNW_004936556:4,896,141...4,898,240 JBrowse link
G Ripk2 receptor interacting serine/threonine kinase 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11894097)
(PMID:11894098), (PMID:18261938)		 Ensembl
MGI		 PMID:11894097 PMID:11894098 PMID:18261938 GO_REF:0000107 NCBI chrNW_004936544:3,606,925...3,653,248
Ensembl chrNW_004936544:3,606,879...3,655,532 		JBrowse link
G Rnase1 ribonuclease A family member 1, pancreatic involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936880:91,085...92,743
Ensembl chrNW_004936880:91,088...92,720 		JBrowse link
G Rnase10 ribonuclease A family member 10 (inactive) involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936877:732,012...734,592
Ensembl chrNW_004936877:732,012...734,868 		JBrowse link
G Rnase11 ribonuclease A family member 11 (inactive) involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004937190:123,663...124,262
Ensembl chrNW_004937190:123,663...124,262 		JBrowse link
G Rnase13 ribonuclease A family member 13 (inactive) involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936880:233,200...245,256
Ensembl chrNW_004936880:233,977...234,447 		JBrowse link
G Rnase4 ribonuclease A family member 4 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936880:41,940...42,988
Ensembl chrNW_004936880:34,289...43,209 		JBrowse link
G Rnase6 ribonuclease A family member k6 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936880:78,532...79,342
Ensembl chrNW_004936880:78,081...79,021 		JBrowse link
G Rnase9 ribonuclease A family member 9 (inactive) involved_in IEA TreeGrafter GO_REF:0000118
G Romo1 reactive oxygen species modulator 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936561:5,134,068...5,135,734
Ensembl chrNW_004936561:5,134,015...5,135,748 		JBrowse link
G Seh1l SEH1 like nucleoporin involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20824097) Ensembl
MGI		 PMID:20824097 GO_REF:0000107 NCBI chrNW_004936626:2,538,655...2,562,468
Ensembl chrNW_004936626:2,540,710...2,562,595 		JBrowse link
G Ssc5d scavenger receptor cysteine rich family member with 5 domains involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936886:715,159...734,428
Ensembl chrNW_004936886:715,253...734,484 		JBrowse link
G Stab2 stabilin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936492:10,678,074...10,817,870
Ensembl chrNW_004936492:10,678,115...10,833,963 		JBrowse link
G Tbk1 TANK binding kinase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15661922) Ensembl
MGI		 PMID:15661922 GO_REF:0000107 NCBI chrNW_004936545:2,763,755...2,809,229
Ensembl chrNW_004936545:2,763,596...2,809,709 		JBrowse link
G Tirap TIR domain containing adaptor protein acts_upstream_of_or_within ISO (PMID:15690042) MGI PMID:15690042 NCBI chrNW_004936572:5,926,193...5,938,621
Ensembl chrNW_004936572:5,924,158...5,938,658 		JBrowse link
G Tlr2 toll like receptor 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15690042), (PMID:19139201)
(PMID:11067888)		 Ensembl
MGI		 PMID:11067888 PMID:15690042 PMID:19139201 GO_REF:0000107 NCBI chrNW_004936576:522,234...531,660
Ensembl chrNW_004936576:527,434...529,788 		JBrowse link
G Tnf tumor necrosis factor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9834074) Ensembl
MGI		 PMID:9834074 GO_REF:0000107 NCBI chrNW_004936727:1,936,066...1,937,766
Ensembl chrNW_004936727:1,936,066...1,937,766 		JBrowse link
G Tnfaip8 TNF alpha induced protein 8 acts_upstream_of_or_within ISO (PMID:20824097) MGI PMID:20824097 NCBI chrNW_004936715:2,205,977...2,322,835
Ensembl chrNW_004936715:2,205,977...2,322,854 		JBrowse link
G Tnfrsf14 TNF receptor superfamily member 14 acts_upstream_of_or_within ISO (PMID:22801499) MGI PMID:22801499 NCBI chrNW_004936737:1,008,228...1,013,575 JBrowse link
G Tnfsf8 TNF superfamily member 8 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16177108) Ensembl
MGI		 PMID:16177108 GO_REF:0000107 NCBI chrNW_004936487:4,057,637...4,081,207
Ensembl chrNW_004936487:4,057,643...4,081,207 		JBrowse link
G Zg16 zymogen granule protein 16 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:27849619) Ensembl
MGI		 PMID:27849619 GO_REF:0000107 NCBI chrNW_004936501:12,699,197...12,700,697
Ensembl chrNW_004936501:12,699,200...12,700,979 		JBrowse link
induced systemic resistance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Myd88 MYD88 innate immune signal transduction adaptor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:25084278) Ensembl
MGI		 PMID:25084278 GO_REF:0000107 NCBI chrNW_004936473:27,672,237...27,676,339
Ensembl chrNW_004936473:27,671,797...27,676,372 		JBrowse link
induction of bacterial agglutination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fga fibrinogen alpha chain involved_in ISO (PMID:24367264) CACAO PMID:24367264 NCBI chrNW_004936576:1,322,406...1,329,743 JBrowse link
G Fgb fibrinogen beta chain involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936576:1,306,076...1,313,485
Ensembl chrNW_004936576:1,306,109...1,313,386 		JBrowse link
G Spon2 spondin 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:14691481) Ensembl
MGI		 PMID:14691481 GO_REF:0000107 NCBI chrNW_004936477:22,087,450...22,093,677
Ensembl chrNW_004936477:22,087,394...22,093,723 		JBrowse link
male-specific defense response to bacterium term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hmgb1 high mobility group box 1 ISO RGD PMID:16997939 RGD:2316780 NCBI chrNW_004936472:25,236,728...25,246,585
Ensembl chrNW_004936472:25,236,728...25,246,580 		JBrowse link
negative regulation of antibacterial peptide production term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Spink5 serine peptidase inhibitor Kazal type 5 involved_in ISO (MGI:3770082|PMID:17012259) UniProt PMID:17012259 MGI:3770082 NCBI chrNW_004936504:6,653,703...6,750,110 JBrowse link
negative regulation of defense response to bacterium term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arg2 arginase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936495:11,004,296...11,045,467
Ensembl chrNW_004936495:11,004,176...11,045,472 		JBrowse link
G Havcr2 hepatitis A virus cellular receptor 2 involved_in ISO (MGI:5437532|PMID:22842346) UniProt PMID:22842346 MGI:5437532 NCBI chrNW_004936515:6,001,324...6,015,407 JBrowse link
G Mapkbp1 mitogen-activated protein kinase binding protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:5,078,259...5,135,937
Ensembl chrNW_004936471:5,080,944...5,133,783 		JBrowse link
G Pten phosphatase and tensin homolog ISO RGD PMID:18056380 RGD:2292524 NCBI chrNW_004936735:1,252,414...1,338,318
Ensembl chrNW_004936735:1,252,414...1,338,323 		JBrowse link
neutrophil-mediated killing of bacterium term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Myd88 MYD88 innate immune signal transduction adaptor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22419116) Ensembl
MGI		 PMID:22419116 GO_REF:0000107 NCBI chrNW_004936473:27,672,237...27,676,339
Ensembl chrNW_004936473:27,671,797...27,676,372 		JBrowse link
G Scnn1b sodium channel epithelial 1 subunit beta involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22419116) Ensembl
MGI		 PMID:22419116 GO_REF:0000107 NCBI chrNW_004936501:8,021,090...8,065,245
Ensembl chrNW_004936501:8,020,316...8,065,332 		JBrowse link
neutrophil-mediated killing of gram-negative bacterium term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dao D-amino acid oxidase involved_in ISO (PMID:25425233)
(MGI:7581102|PMID:25425233)		 UniProt PMID:25425233 MGI:7581102 NCBI chrNW_004936769:744,862...758,086
Ensembl chrNW_004936769:744,864...758,452 		JBrowse link
G F2 coagulation factor II, thrombin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936562:2,371,725...2,388,617
Ensembl chrNW_004936562:2,372,044...2,388,650 		JBrowse link
G LOC101954594 triggering receptor expressed on myeloid cells 3-like involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936476:18,587,461...18,592,750 JBrowse link
G LOC101961846 neutrophil elastase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936588:345,678...347,420
Ensembl chrNW_004936588:345,678...347,413 		JBrowse link
G Trem1 triggering receptor expressed on myeloid cells 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23241959) TreeGrafter
MGI		 PMID:23241959 GO_REF:0000118 NCBI chrNW_004936476:18,577,825...18,583,675
Ensembl chrNW_004936476:18,574,381...18,583,647 		JBrowse link
G TUSC2 tumor suppressor 2, mitochondrial calcium regulator involved_in IEA Ensembl GO_REF:0000107 Ensembl chrNW_004936529:1,853,120...1,856,637 JBrowse link
neutrophil-mediated killing of gram-positive bacterium term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC101959956 cathepsin G-like involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936722:34,410...37,097
Ensembl chrNW_004936722:34,392...37,097 		JBrowse link
G Ncf1 neutrophil cytosolic factor 1 acts_upstream_of_or_within ISO (PMID:11907569) MGI PMID:11907569 NCBI chrNW_004936543:3,617,369...3,630,990
Ensembl chrNW_004936543:3,617,372...3,630,997 		JBrowse link
G Nlrp6 NLR family pyrin domain containing 6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:30248149) Ensembl
MGI		 PMID:30248149 GO_REF:0000107 NCBI chrNW_004936888:145,642...151,716
Ensembl chrNW_004936888:145,642...151,182 		JBrowse link
positive regulation of antibacterial peptide biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nod2 nucleotide binding oligomerization domain containing 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18167348) Ensembl
MGI		 PMID:18167348 GO_REF:0000107 NCBI chrNW_004936475:3,708,069...3,742,845
Ensembl chrNW_004936475:3,713,362...3,745,982 		JBrowse link
positive regulation of antibacterial peptide production term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Klk5 kallikrein related peptidase 5 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936889:609,807...616,777
Ensembl chrNW_004936889:610,172...617,088 		JBrowse link
G Klk7 kallikrein related peptidase 7 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936889:637,526...641,126
Ensembl chrNW_004936889:637,996...641,126 		JBrowse link
G Pgc progastricsin involved_in ISO (PMID:12759353) UniProt PMID:12759353 NCBI chrNW_004936476:18,039,709...18,046,510 JBrowse link
positive regulation of biosynthetic process of antibacterial peptides active against Gram-positive bacteria term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nod2 nucleotide binding oligomerization domain containing 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15692051) Ensembl
MGI		 PMID:15692051 GO_REF:0000107 NCBI chrNW_004936475:3,708,069...3,742,845
Ensembl chrNW_004936475:3,713,362...3,745,982 		JBrowse link
positive regulation of defense response to bacterium term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Emilin1 elastin microfibril interfacer 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936493:5,455,369...5,463,205
Ensembl chrNW_004936493:5,455,197...5,463,223 		JBrowse link
G Emilin2 elastin microfibril interfacer 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936672:1,607,914...1,661,531
Ensembl chrNW_004936672:1,609,193...1,661,528 		JBrowse link
G Grn granulin precursor involved_in ISO (MGI:4421471|PMID:20026663) UniProt PMID:20026663 MGI:4421471 NCBI chrNW_004936541:793,548...800,271
Ensembl chrNW_004936541:793,523...800,217 		JBrowse link
G Havcr2 hepatitis A virus cellular receptor 2 involved_in ISO (MGI:4839671|PMID:20937702) UniProt PMID:20937702 MGI:4839671 NCBI chrNW_004936515:6,001,324...6,015,407 JBrowse link
G Lgals9 galectin 9 involved_in ISO (MGI:4839671|PMID:20937702) UniProt PMID:20937702 MGI:4839671 NCBI chrNW_004936538:4,034,467...4,050,240 JBrowse link
G LOC101967032 cytochrome b-245 light chain involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936641:1,036,967...1,044,954
Ensembl chrNW_004936641:1,036,967...1,044,991 		JBrowse link
G Mmrn2 multimerin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936804:22,609...39,974
Ensembl chrNW_004936804:22,533...39,540 		JBrowse link
G Nlrp10 NLR family pyrin domain containing 10 involved_in ISO (PMID:28766990) UniProt PMID:28766990 NCBI chrNW_004936528:9,938,270...9,969,115 JBrowse link
G Rab34 RAB34, member RAS oncogene family involved_in ISO (MGI:5467668|PMID:23197834) ParkinsonsUK-UCL PMID:23197834 MGI:5467668 NCBI chrNW_004936538:4,923,740...4,928,798
Ensembl chrNW_004936538:4,923,424...4,928,809 		JBrowse link
G Unc13b unc-13 homolog B involved_in ISO (MGI:5467668|PMID:23197834) ParkinsonsUK-UCL PMID:23197834 MGI:5467668 NCBI chrNW_004936524:3,320,859...3,369,865 JBrowse link
positive regulation of neutrophil mediated killing of gram-negative bacterium term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G F2rl1 F2R like trypsin receptor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936549:142,281...153,575
Ensembl chrNW_004936549:141,512...153,602 		JBrowse link
regulation of antibacterial peptide production term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Evpl envoplakin involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:27427436) Ensembl
MGI		 PMID:27427436 GO_REF:0000107 NCBI chrNW_004936594:1,164,980...1,181,957
Ensembl chrNW_004936594:1,162,475...1,182,020 		JBrowse link
G Ivl involucrin acts_upstream_of_or_within ISO (PMID:27427436) MGI PMID:27427436 NCBI chrNW_004936580:2,892,316...2,894,085 JBrowse link
G Ppl periplakin acts_upstream_of_or_within ISO (PMID:27427436) MGI PMID:27427436 NCBI chrNW_004936530:4,826,271...4,866,093
Ensembl chrNW_004936530:4,825,679...4,866,093 		JBrowse link
regulation of defense response to bacterium term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxp1 forkhead box P1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936603:2,631,781...3,146,104
Ensembl chrNW_004936603:2,632,274...2,830,324 		JBrowse link
G Syt11 synaptotagmin 11 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936580:5,123,196...5,142,976
Ensembl chrNW_004936580:5,129,865...5,142,885 		JBrowse link
regulation of neutrophil mediated killing of gram-negative bacterium term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC101954938 C-X-C motif chemokine 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936598:1,729,263...1,729,840
Ensembl chrNW_004936598:1,728,861...1,729,843 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 15969
    biological process involved in interspecies interaction between organisms 1531
      response to other organism 1404
        defense response to other organism 974
          defense response to bacterium 246
            antibacterial humoral response + 29
            antibacterial innate immune response 7
            defense response to Gram-negative bacterium + 68
            defense response to Gram-positive bacterium + 91
            induced systemic resistance + 1
            male-specific defense response to bacterium + 1
            negative regulation of defense response to bacterium + 5
            neutrophil-mediated killing of bacterium + 13
            peptidoglycan recognition protein signaling pathway + 0
            positive regulation of defense response to bacterium + 15
            regulation of defense response to bacterium + 21
Path 2
Term Annotations click to browse term
  biological_process 15969
    response to stimulus 8553
      response to external stimulus 2249
        response to external biotic stimulus 1408
          response to other organism 1404
            response to bacterium 735
              defense response to bacterium 246
                antibacterial humoral response + 29
                antibacterial innate immune response 7
                defense response to Gram-negative bacterium + 68
                defense response to Gram-positive bacterium + 91
                induced systemic resistance + 1
                male-specific defense response to bacterium + 1
                negative regulation of defense response to bacterium + 5
                neutrophil-mediated killing of bacterium + 13
                peptidoglycan recognition protein signaling pathway + 0
                positive regulation of defense response to bacterium + 15
                regulation of defense response to bacterium + 21
paths to the root