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ONTOLOGY REPORT - ANNOTATIONS


Term:flavin-containing compound metabolic process
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Accession:GO:0042726 term browser browse the term
Definition:The chemical reactions and pathways involving a flavin, any derivative of the dimethylisoalloxazine (7,8-dimethylbenzo[g]pteridine-2,4(3H,10H)-dione) skeleton, with a substituent on the 10 position.
Synonyms:exact_synonym: flavin-containing compound metabolism
 related_synonym: riboflavin and derivative metabolic process;   riboflavin and derivative metabolism;   vitamin B2 and derivative metabolic process;   vitamin B2 and derivative metabolism



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FAD biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Flad1 flavin adenine dinucleotide synthetase 1 involved_in IEA
IBA
GO_REF:0000041
GO_REF:0000033
UniProt
GO_Central
GO_REF:0000033 GO_REF:0000041 NCBI chr 2:174,819,451...174,828,921
Ensembl chr 2:174,819,453...174,828,977
JBrowse link
flavin adenine dinucleotide biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Flad1 flavin adenine dinucleotide synthetase 1 involved_in ISO (PMID:28402850) RGD PMID:28402850 NCBI chr 2:174,819,451...174,828,921
Ensembl chr 2:174,819,453...174,828,977
JBrowse link
G Rfk riboflavin kinase involved_in ISO MGI:4356069 (PMID:24272050) RGD PMID:24272050 NCBI chr 1:214,799,880...214,807,440
Ensembl chr 1:214,799,825...214,807,438
Ensembl chr  X:214,799,825...214,807,438
JBrowse link
G Slc52a2 solute carrier family 52 member 2 involved_in ISO (PMID:23911957), (PMID:26791833) RGD PMID:23911957 PMID:26791833 NCBI chr 7:108,246,003...108,267,642
Ensembl chr 7:108,262,612...108,268,034
JBrowse link
G Slc52a3 solute carrier family 52 member 3 involved_in IEA
ISO
GO_REF:0000107
MGI:4363008 (PMID:33116204)
Ensembl
RGD
PMID:33116204 GO_REF:0000107 NCBI chr 3:140,498,924...140,515,845
Ensembl chr 3:140,509,473...140,514,096
JBrowse link
flavin adenine dinucleotide catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Vcp valosin-containing protein involved_in ISO (PMID:23498975) RGD PMID:23498975 NCBI chr 5:57,210,167...57,229,571
Ensembl chr 5:57,210,168...57,229,571
JBrowse link
FMN biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rfk riboflavin kinase involved_in IEA
IBA
GO_REF:0000041
GO_REF:0000033
UniProt
GO_Central
GO_REF:0000033 GO_REF:0000041 NCBI chr 1:214,799,880...214,807,440
Ensembl chr 1:214,799,825...214,807,438
Ensembl chr  X:214,799,825...214,807,438
JBrowse link
G Rfk-ps3 riboflavin kinase, pseudogene 3 involved_in IBA
IEA
GO_REF:0000033
GO_REF:0000041
GO_Central
UniProt
GO_REF:0000033 GO_REF:0000041 NCBI chr 3:86,510,729...86,512,353 JBrowse link
riboflavin biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rfk riboflavin kinase involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 1:214,799,880...214,807,440
Ensembl chr 1:214,799,825...214,807,438
Ensembl chr  X:214,799,825...214,807,438
JBrowse link
G Rfk-ps3 riboflavin kinase, pseudogene 3 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 3:86,510,729...86,512,353 JBrowse link
riboflavin metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Flad1 flavin adenine dinucleotide synthetase 1 involved_in ISO (PMID:28402850) RGD PMID:28402850 NCBI chr 2:174,819,451...174,828,921
Ensembl chr 2:174,819,453...174,828,977
JBrowse link
G Rfk riboflavin kinase involved_in ISO
IBA
(PMID:19641494)
MGI:4356069 (PMID:24272050)
GO_REF:0000033
RGD
GO_Central
PMID:19641494 PMID:24272050 GO_REF:0000033 NCBI chr 1:214,799,880...214,807,440
Ensembl chr 1:214,799,825...214,807,438
Ensembl chr  X:214,799,825...214,807,438
JBrowse link
G Rfk-ps3 riboflavin kinase, pseudogene 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:86,510,729...86,512,353 JBrowse link
G Slc52a2 solute carrier family 52 member 2 involved_in ISO (PMID:23911957), (PMID:26791833) RGD PMID:23911957 PMID:26791833 NCBI chr 7:108,246,003...108,267,642
Ensembl chr 7:108,262,612...108,268,034
JBrowse link
G Slc52a3 solute carrier family 52 member 3 involved_in IEA
ISO
GO_REF:0000107
MGI:4363008 (PMID:33116204)
Ensembl
RGD
PMID:33116204 GO_REF:0000107 NCBI chr 3:140,498,924...140,515,845
Ensembl chr 3:140,509,473...140,514,096
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19872
    metabolic process 11602
      organonitrogen compound metabolic process 5725
        flavin-containing compound metabolic process 6
          FMN metabolic process + 2
          flavin adenine dinucleotide metabolic process + 5
          flavin-containing compound biosynthetic process + 5
          flavin-containing compound catabolic process + 1
          riboflavin metabolic process + 5
paths to the root