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ONTOLOGY REPORT - ANNOTATIONS


Term:thiamine-containing compound biosynthetic process
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Accession:GO:0042724 term browser browse the term
Definition:The chemical reactions and pathways resulting in the formation of thiamine (vitamin B1), and related compounds.
Synonyms:exact_synonym: thiamin and derivative biosynthesis;   thiamin and derivative biosynthetic process;   thiamin-containing compound biosynthetic process;   thiamine and derivative biosynthesis;   thiamine and derivative biosynthetic process;   thiamine-containing compound anabolism;   thiamine-containing compound biosynthesis;   thiamine-containing compound formation;   thiamine-containing compound synthesis;   vitamin B1 and derivative biosynthesis;   vitamin B1 and derivative biosynthetic process



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thiamine diphosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc19a2 solute carrier family 19 member 2 involved_in ISO (MGI:7484782|PMID:8186267) RGD PMID:8186267 MGI:7484782 NCBI chr13:76,601,975...76,616,175
Ensembl chr13:76,601,900...76,616,172
JBrowse link
G Slc19a3 solute carrier family 19 member 3 involved_in ISO MGI:4948864 (MGI:5917227|PMID:28665968), (MGI:7484782|PMID:8186267) RGD PMID:8186267 PMID:28665968 MGI:5917227 MGI:7484782 NCBI chr 9:84,275,722...84,299,368
Ensembl chr 9:84,277,024...84,299,337
JBrowse link
G Slc25a19 solute carrier family 25 member 19 involved_in ISO MGI:3691853 (MGI:3691401|PMID:17035501), (MGI:7484782|PMID:8186267) RGD PMID:8186267 PMID:17035501 MGI:3691401 MGI:7484782 NCBI chr10:100,853,554...100,867,517
Ensembl chr10:100,847,168...100,867,447
JBrowse link
G Thtpa thiamine triphosphatase involved_in ISO
IEA
(MGI:3796446|PMID:18276586)
GO_REF:0000107
RGD
Ensembl
PMID:18276586 GO_REF:0000107 MGI:3796446 NCBI chr15:28,567,619...28,571,580
Ensembl chr15:28,567,323...28,571,580
JBrowse link
G Tpk1 thiamin pyrophosphokinase 1 involved_in ISO
IEA
IBA
(PMID:11342111)
GO_REF:0000041
(MGI:1350425|PMID:10567383)
GO_REF:0000033
RGD
UniProt
GO_Central
PMID:10567383 PMID:11342111 GO_REF:0000033 GO_REF:0000041 MGI:1350425 NCBI chr 4:72,170,134...72,557,707
Ensembl chr 4:72,170,134...72,557,694
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20295
    metabolic process 11722
      cellular metabolic process 10283
        cellular aromatic compound metabolic process 5944
          aromatic compound biosynthetic process 3870
            thiamine-containing compound biosynthetic process 5
              thiamine biosynthetic process + 0
              thiamine diphosphate biosynthetic process + 5
Path 2
Term Annotations click to browse term
  biological_process 20295
    metabolic process 11722
      biosynthetic process 8358
        organic substance biosynthetic process 8293
          organonitrogen compound biosynthetic process 2128
            pyrimidine-containing compound biosynthetic process 41
              thiamine-containing compound biosynthetic process 5
                thiamine biosynthetic process + 0
                thiamine diphosphate biosynthetic process + 5
paths to the root