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ONTOLOGY REPORT - ANNOTATIONS


Term:muscle cell fate commitment
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Accession:GO:0042693 term browser browse the term
Definition:The process in which the cellular identity of muscle cells is acquired and determined.


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muscle cell fate commitment term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgf10 fibroblast growth factor 10 ISO MGI:1859647|MGI:3629660 (MGI:3578606|PMID:15800000) RGD PMID:15800000 MGI:3578606 NCBI chr 2:51,673,480...51,747,533
Ensembl chr 2:51,672,722...51,750,369
JBrowse link
G Tbx1 T-box transcription factor 1 ISS
ISO
GO_REF:0000024
MGI:2179190 (MGI:3809316|PMID:18816853)
UniProt
RGD
PMID:18816853 GO_REF:0000024 MGI:3809316 NCBI chr11:86,552,022...86,561,647
Ensembl chr11:86,552,022...86,560,969
JBrowse link
atrioventricular node cell fate commitment term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nkx2-5 NK2 homeobox 5 IEA
ISO
GO_REF:0000107
MGI:3042511 (MGI:3040116|PMID:15109497)
Ensembl
RGD
PMID:15109497 GO_REF:0000107 MGI:3040116 NCBI chr10:16,635,989...16,638,758
Ensembl chr10:16,635,989...16,638,764
JBrowse link
canonical Wnt signaling pathway involved in cardiac muscle cell fate commitment term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Wnt3a Wnt family member 3A ISO (PMID:20559569) RGD PMID:20559569 NCBI chr10:45,598,898...45,643,151
Ensembl chr10:45,598,912...45,638,035
JBrowse link
G Wnt8a Wnt family member 8A ISO (PMID:20559569) RGD PMID:20559569 NCBI chr18:27,331,236...27,336,829
Ensembl chr18:27,331,236...27,336,829
JBrowse link
cardiac muscle cell fate commitment term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acvr1 activin A receptor type 1 ISO
IEA
(PMID:19506109)
GO_REF:0000107
RGD
Ensembl
PMID:19506109 GO_REF:0000107 NCBI chr 3:44,432,476...44,539,680
Ensembl chr 3:44,432,471...44,522,930
JBrowse link
G RGD1311744 similar to RIKEN cDNA 5830475I06 IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 8:43,315,104...43,336,357
Ensembl chr 8:43,315,592...43,336,304
JBrowse link
G Tbx3 T-box transcription factor 3 ISO MGI:3710254 (MGI:3847383|PMID:18467625) RGD PMID:18467625 MGI:3847383 NCBI chr12:42,479,518...42,494,588
Ensembl chr12:42,480,560...42,492,526
JBrowse link
G Wnt3a Wnt family member 3A ISO MGI:2143322 (MGI:5295932|PMID:21554246) RGD PMID:21554246 MGI:5295932 NCBI chr10:45,598,898...45,643,151
Ensembl chr10:45,598,912...45,638,035
JBrowse link
G Wt1 WT1 transcription factor ISO (MGI:5285454|PMID:21654746) RGD PMID:21654746 MGI:5285454 NCBI chr 3:95,133,221...95,180,574
Ensembl chr 3:95,133,713...95,180,564
JBrowse link
muscle cell fate determination term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mef2c myocyte enhancer factor 2C IEA
ISO
GO_REF:0000107
MGI:3718323 (MGI:3763703|PMID:17786239)
Ensembl
RGD
PMID:17786239 GO_REF:0000107 MGI:3763703 NCBI chr 2:11,658,534...11,822,788
Ensembl chr 2:11,658,568...11,822,787
JBrowse link
G Tbx2 T-box transcription factor 2 ISO MGI:3505715 (MGI:3487212|PMID:15459098) RGD PMID:15459098 MGI:3487212 NCBI chr10:73,278,932...73,290,764
Ensembl chr10:73,279,119...73,289,921
JBrowse link
muscle cell fate specification term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Myl2 myosin light chain 2 IEA
ISO
GO_REF:0000107
(MGI:67939|PMID:1379240)
Ensembl
RGD
PMID:1379240 GO_REF:0000107 MGI:67939 NCBI chr12:39,951,863...39,959,065
Ensembl chr12:39,951,987...39,958,239
JBrowse link
negative regulation of canonical Wnt signaling pathway involved in cardiac muscle cell fate commitment term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dkk1 dickkopf WNT signaling pathway inhibitor 1 ISO (PMID:20559569) RGD PMID:20559569 NCBI chr 1:248,952,896...248,956,579
Ensembl chr 1:248,895,738...248,898,607
JBrowse link
positive regulation of canonical Wnt signaling pathway involved in cardiac muscle cell fate commitment term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rbpj recombination signal binding protein for immunoglobulin kappa J region ISO MGI:3583755 (MGI:5432296|PMID:22711842) RGD PMID:22711842 MGI:5432296 NCBI chr14:59,657,738...59,865,427
Ensembl chr14:59,658,935...59,735,450
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20030
    cellular process 18802
      cellular developmental process 4458
        cell fate commitment 282
          muscle cell fate commitment 14
            cardiac muscle cell fate commitment + 9
            muscle cell fate determination + 2
            muscle cell fate specification + 1
            vascular associated smooth muscle cell fate commitment + 0
Path 2
Term Annotations click to browse term
  biological_process 20030
    cellular process 18802
      cellular developmental process 4458
        cell differentiation 4363
          muscle cell differentiation 419
            muscle cell fate commitment 14
              cardiac muscle cell fate commitment + 9
              muscle cell fate determination + 2
              muscle cell fate specification + 1
              vascular associated smooth muscle cell fate commitment + 0
paths to the root