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ONTOLOGY REPORT - ANNOTATIONS


Term:muscle cell fate commitment
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Accession:GO:0042693 term browser browse the term
Definition:The process in which the cellular identity of muscle cells is acquired and determined.



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muscle cell fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgf10 fibroblast growth factor 10 acts_upstream_of_or_within ISO MGI:1859647|MGI:3629660 (PMID:15800000) RGD PMID:15800000 NCBI chr 2:50,801,171...50,878,218
Ensembl chr 2:50,800,992...50,876,866
JBrowse link
G Tbx1 T-box transcription factor 1 involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
MGI:2179190 (PMID:18816853)
UniProt
RGD
PMID:18816853 GO_REF:0000024 NCBI chr11:82,409,275...82,419,058
Ensembl chr11:82,409,275...82,418,380
JBrowse link
atrioventricular node cell fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nkx2-5 NK2 homeobox 5 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3042511 (PMID:15109497)
Ensembl
RGD
PMID:15109497 GO_REF:0000107 NCBI chr10:16,340,428...16,347,004
Ensembl chr10:16,344,159...16,346,934
JBrowse link
G Tbx5 T-box transcription factor 5 involved_in IEA
ISO
GO_REF:0000107
(MGI:3051695|PMID:15289437)
Ensembl
RGD
PMID:15289437 GO_REF:0000107 MGI:3051695 NCBI chr12:36,686,344...36,739,253
Ensembl chr12:36,688,014...36,734,885
JBrowse link
cardiac muscle cell fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acvr1 activin A receptor type 1 involved_in ISO
IEA
(PMID:19506109)
GO_REF:0000107
RGD
Ensembl
PMID:19506109 GO_REF:0000107 NCBI chr 3:42,978,558...43,097,892
Ensembl chr 3:42,978,561...43,098,241
JBrowse link
G Tbx3 T-box transcription factor 3 acts_upstream_of_or_within ISO MGI:3710254 (PMID:18467625) RGD PMID:18467625 NCBI chr12:36,879,924...36,894,849
Ensembl chr12:36,881,445...36,893,708
JBrowse link
G Wnt3a Wnt family member 3A involved_in
acts_upstream_of_or_within
ISO (PMID:20559569)
MGI:2143322 (PMID:21554246)
RGD PMID:20559569 PMID:21554246 NCBI chr10:44,034,174...44,078,366
Ensembl chr10:44,034,194...44,078,324
JBrowse link
G Wt1 WT1 transcription factor involved_in ISO (MGI:5285454|PMID:21654746) RGD PMID:21654746 MGI:5285454 NCBI chr 3:91,566,540...91,613,653
Ensembl chr 3:91,567,001...91,613,643
JBrowse link
muscle cell fate determination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mef2c myocyte enhancer factor 2C acts_upstream_of_or_within ISO MGI:3718323 (PMID:17786239) RGD PMID:17786239 NCBI chr 2:13,973,299...14,136,065
Ensembl chr 2:13,993,438...14,132,880
JBrowse link
G Tbx2 T-box transcription factor 2 acts_upstream_of_or_within ISO MGI:3505715 (PMID:15459098) RGD PMID:15459098 NCBI chr10:70,679,670...70,688,868
Ensembl chr10:70,679,518...70,688,529
JBrowse link
muscle cell fate specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Myl2 myosin light chain 2 involved_in
acts_upstream_of_or_within
IBA
ISO
GO_REF:0000033
(PMID:1379240)
GO_Central
RGD
PMID:1379240 GO_REF:0000033 NCBI chr12:34,454,223...34,468,554
Ensembl chr12:34,454,218...34,468,983
JBrowse link
sinoatrial node cell fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tbx18 T-box transcription factor 18 involved_in ISO (PMID:23242162) RGD PMID:23242162 NCBI chr 8:88,652,054...88,680,081
Ensembl chr 8:88,652,054...88,680,058
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19872
    cellular process 18312
      cellular developmental process 4721
        cell fate commitment 296
          muscle cell fate commitment 12
            cardiac muscle cell fate commitment + 7
            muscle cell fate determination + 2
            muscle cell fate specification + 1
            vascular associated smooth muscle cell fate commitment + 0
Path 2
Term Annotations click to browse term
  biological_process 19872
    cellular process 18312
      cellular developmental process 4721
        cell differentiation 4720
          muscle cell differentiation 482
            muscle cell fate commitment 12
              cardiac muscle cell fate commitment + 7
              muscle cell fate determination + 2
              muscle cell fate specification + 1
              vascular associated smooth muscle cell fate commitment + 0
paths to the root