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ONTOLOGY REPORT - ANNOTATIONS


Term:regulation of cell fate specification
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Accession:GO:0042659 term browser browse the term
Definition:Any process that mediates the adoption of a specific fate by a cell.


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regulation of cell fate specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LMO4 LIM domain only 4 acts_upstream_of_or_within ISO (MGI:3840011|PMID:19323994) MGI PMID:19323994 MGI:3840011 NCBI chr 4:128,894,113...128,910,648 JBrowse link
activation of prostate induction by androgen receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AR androgen receptor involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3714080|PMID:17317769) Ensembl
MGI
PMID:17317769 GO_REF:0000107 MGI:3714080 NCBI chr  X:53,609,113...53,806,778
Ensembl chr  X:53,609,176...53,805,578
JBrowse link
negative regulation of cell fate specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GFI1 growth factor independent 1 transcriptional repressor acts_upstream_of_or_within ISO (MGI:3606816|PMID:16230531) MGI PMID:16230531 MGI:3606816 NCBI chr 4:124,619,887...124,629,638
Ensembl chr 4:124,621,258...124,629,639
JBrowse link
negative regulation of ectodermal cell fate specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FZD7 frizzled class receptor 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:105,644,164...105,648,860
Ensembl chr15:105,644,188...105,648,854
JBrowse link
negative regulation of endodermal cell fate specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MESP1 mesoderm posterior bHLH transcription factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:55,322,016...55,327,600
Ensembl chr 7:55,322,010...55,325,732
JBrowse link
negative regulation of heart induction by canonical Wnt signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G WNT3A Wnt family member 3A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:51,153,978...51,203,678
Ensembl chr 2:51,154,086...51,202,176
JBrowse link
negative regulation of mesodermal cell fate specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DKK1 dickkopf WNT signaling pathway inhibitor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:97,487,854...97,490,118
Ensembl chr14:97,487,226...97,490,450
JBrowse link
G MESP1 mesoderm posterior bHLH transcription factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:55,322,016...55,327,600
Ensembl chr 7:55,322,010...55,325,732
JBrowse link
G SFRP2 secreted frizzled related protein 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3711603|PMID:17462603) Ensembl
MGI
PMID:17462603 GO_REF:0000107 MGI:3711603 NCBI chr 8:75,337,311...75,345,926
Ensembl chr 8:75,337,133...75,345,926
JBrowse link
positive regulation of cell fate specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FGF2 fibroblast growth factor 2 involved_in ISO (PMID:18635606) MGI PMID:18635606 NCBI chr 8:101,278,877...101,344,084
Ensembl chr 8:101,278,878...101,343,916
JBrowse link
G GFI1 growth factor independent 1 transcriptional repressor acts_upstream_of_or_within ISO (MGI:3606816|PMID:16230531) MGI PMID:16230531 MGI:3606816 NCBI chr 4:124,619,887...124,629,638
Ensembl chr 4:124,621,258...124,629,639
JBrowse link
G PAX6 paired box 6 ISO RGD PMID:11880342 RGD:729590 NCBI chr 2:28,971,565...29,001,149
Ensembl chr 2:28,971,567...29,001,200
JBrowse link
positive regulation of heart induction by negative regulation of canonical Wnt signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DKK1 dickkopf WNT signaling pathway inhibitor 1 involved_in ISO (MGI:3835736|PMID:18297060) BHF-UCL PMID:18297060 MGI:3835736 NCBI chr14:97,487,854...97,490,118
Ensembl chr14:97,487,226...97,490,450
JBrowse link
G MESP1 mesoderm posterior bHLH transcription factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:55,322,016...55,327,600
Ensembl chr 7:55,322,010...55,325,732
JBrowse link
G WNT11 Wnt family member 11 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:10,413,182...10,435,158
Ensembl chr 9:10,413,187...10,435,100
JBrowse link
G WNT5A Wnt family member 5A involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:37,344,684...37,367,215
Ensembl chr13:37,344,699...37,367,207
JBrowse link
positive regulation of mesodermal cell fate specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G WNT3A Wnt family member 3A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:51,153,978...51,203,678
Ensembl chr 2:51,154,086...51,202,176
JBrowse link
regulation of cardiac cell fate specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SOX17 SRY-box transcription factor 17 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:76,854,218...76,857,143
Ensembl chr 4:76,852,230...76,857,139
JBrowse link
regulation of endodermal cell fate specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DKK1 dickkopf WNT signaling pathway inhibitor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:97,487,854...97,490,118
Ensembl chr14:97,487,226...97,490,450
JBrowse link
regulation of heart induction by regulation of canonical Wnt signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G POU5F1 POU class 5 homeobox 1 involved_in ISO (PMID:19736317) BHF-UCL PMID:19736317 NCBI chr 7:23,564,654...23,570,691 JBrowse link
regulation of inner ear auditory receptor cell fate specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ESRP1 epithelial splicing regulatory protein 1 involved_in ISO (MGI:5915403|PMID:29107558) UniProt PMID:29107558 MGI:5915403 NCBI chr 4:41,993,944...42,061,706
Ensembl chr 4:41,993,944...42,061,236
JBrowse link
regulation of lateral mesodermal cell fate specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMPR1A bone morphogenetic protein receptor type 1A involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3702797|PMID:16943278) Ensembl
MGI
PMID:16943278 GO_REF:0000107 MGI:3702797 NCBI chr14:87,743,270...87,891,790
Ensembl chr14:87,742,459...87,891,793
JBrowse link
G FGFR1 fibroblast growth factor receptor 1 acts_upstream_of_or_within ISO (MGI:3702797|PMID:16943278) MGI PMID:16943278 MGI:3702797 NCBI chr15:48,053,895...48,106,634
Ensembl chr15:48,053,340...48,106,746
JBrowse link
regulation of neural crest cell fate specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMPR1A bone morphogenetic protein receptor type 1A NOT|involved_in ISO (MGI:3040576|PMID:15073157) BHF-UCL PMID:15073157 MGI:3040576 NCBI chr14:87,743,270...87,891,790
Ensembl chr14:87,742,459...87,891,793
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 16538
    regulation of biological process 11442
      regulation of cellular process 10997
        regulation of cell fate commitment 35
          regulation of cell fate specification 17
            activation of prostate induction by androgen receptor signaling pathway 1
            negative regulation of cell fate specification + 6
            positive regulation of cell fate specification + 4
            regulation of atrichoblast fate specification + 0
            regulation of cardiac cell fate specification + 2
            regulation of compound eye cone cell fate specification + 0
            regulation of ectodermal cell fate specification + 1
            regulation of endodermal cell fate specification + 2
            regulation of heart induction by regulation of canonical Wnt signaling pathway + 5
            regulation of inner ear auditory receptor cell fate specification + 1
            regulation of mesodermal cell fate specification + 6
            regulation of neural crest cell fate specification + 1
            regulation of retinal cone cell fate specification + 0
            regulation of trichoblast fate specification + 0
Path 2
Term Annotations click to browse term
  biological_process 16538
    cellular process 15825
      cellular developmental process 4168
        cell differentiation 4080
          cell fate commitment 278
            cell fate specification 99
              regulation of cell fate specification 17
                activation of prostate induction by androgen receptor signaling pathway 1
                negative regulation of cell fate specification + 6
                positive regulation of cell fate specification + 4
                regulation of atrichoblast fate specification + 0
                regulation of cardiac cell fate specification + 2
                regulation of compound eye cone cell fate specification + 0
                regulation of ectodermal cell fate specification + 1
                regulation of endodermal cell fate specification + 2
                regulation of heart induction by regulation of canonical Wnt signaling pathway + 5
                regulation of inner ear auditory receptor cell fate specification + 1
                regulation of mesodermal cell fate specification + 6
                regulation of neural crest cell fate specification + 1
                regulation of retinal cone cell fate specification + 0
                regulation of trichoblast fate specification + 0
paths to the root