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ONTOLOGY REPORT - ANNOTATIONS

Term:regulation of cell fate specification
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Accession:GO:0042659 term browser browse the term
Definition:Any process that mediates the adoption of a specific fate by a cell.

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regulation of cell fate specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lmo4 LIM domain only 4 acts_upstream_of_or_within IMP (MGI:3840011|PMID:19323994) MGI PMID:19323994 MGI:3840011 NCBI chr 3:144,188,530...144,205,255
Ensembl chr 3:144,188,530...144,205,220 		JBrowse link
activation of prostate induction by androgen receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ar androgen receptor acts_upstream_of_or_within IMP (MGI:3714080|PMID:17317769) MGI PMID:17317769 MGI:3714080 NCBI chr  X:98,148,757...98,323,218
Ensembl chr  X:98,148,769...98,323,215 		JBrowse link
negative regulation of cell fate specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gfi1 growth factor independent 1 transcription repressor acts_upstream_of_or_within IMP (MGI:3606816|PMID:16230531) MGI PMID:16230531 MGI:3606816 NCBI chr 5:107,716,655...107,725,805
Ensembl chr 5:107,716,657...107,726,036 		JBrowse link
negative regulation of ectodermal cell fate specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fzd7 frizzled class receptor 7 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 1:59,482,147...59,486,955
Ensembl chr 1:59,482,424...59,486,955 		JBrowse link
negative regulation of endodermal cell fate specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mesp1 mesoderm posterior 1 involved_in IDA (MGI:4441249|PMID:18593560) BHF-UCL PMID:18593560 MGI:4441249 NCBI chr 7:79,792,241...79,793,590
Ensembl chr 7:79,792,241...79,793,788 		JBrowse link
G Nanog Nanog homeobox involved_in TAS (MGI:3690198|PMID:16501172) HGNC-UCL PMID:16501172 MGI:3690198 NCBI chr 6:122,707,489...122,714,633
Ensembl chr 6:122,707,489...122,714,633 		JBrowse link
negative regulation of heart induction by canonical Wnt signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Wnt3a wingless-type MMTV integration site family, member 3A involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr11:59,248,036...59,290,751
Ensembl chr11:59,248,033...59,290,752 		JBrowse link
negative regulation of mesodermal cell fate specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dkk1 dickkopf WNT signaling pathway inhibitor 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr19:30,545,876...30,549,496
Ensembl chr19:30,545,863...30,549,665 		JBrowse link
G Mesp1 mesoderm posterior 1 involved_in IDA (MGI:4441249|PMID:18593560) BHF-UCL PMID:18593560 MGI:4441249 NCBI chr 7:79,792,241...79,793,590
Ensembl chr 7:79,792,241...79,793,788 		JBrowse link
G Sfrp2 secreted frizzled-related protein 2 acts_upstream_of_or_within IGI (MGI:3711603|PMID:17462603) MGI PMID:17462603 MGI:3711603 NCBI chr 3:83,765,750...83,774,314
Ensembl chr 3:83,766,321...83,774,316 		JBrowse link
positive regulation of cell fate specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgf2 fibroblast growth factor 2 involved_in
acts_upstream_of_or_within		 ISO (PMID:18635606)
(MGI:3807614|PMID:18635606)		 MGI
MGI		 PMID:18635606 MGI:3807614 NCBI chr 3:37,348,477...37,410,106
Ensembl chr 3:37,348,346...37,410,108 		JBrowse link
G Gfi1 growth factor independent 1 transcription repressor acts_upstream_of_or_within IMP (MGI:3606816|PMID:16230531) MGI PMID:16230531 MGI:3606816 NCBI chr 5:107,716,655...107,725,805
Ensembl chr 5:107,716,657...107,726,036 		JBrowse link
G Pax6 paired box 6 acts_upstream_of_or_within ISO MGI
RGD		 PMID:11880342 GO_REF:0000096 MGI:4417868 RGD:729590 NCBI chr 2:105,668,896...105,698,410
Ensembl chr 2:105,668,900...105,697,364 		JBrowse link
positive regulation of heart induction by negative regulation of canonical Wnt signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dkk1 dickkopf WNT signaling pathway inhibitor 1 involved_in IDA (MGI:3835736|PMID:18297060) BHF-UCL PMID:18297060 MGI:3835736 NCBI chr19:30,545,876...30,549,496
Ensembl chr19:30,545,863...30,549,665 		JBrowse link
G Mesp1 mesoderm posterior 1 involved_in IDA (MGI:3835736|PMID:18297060) BHF-UCL PMID:18297060 MGI:3835736 NCBI chr 7:79,792,241...79,793,590
Ensembl chr 7:79,792,241...79,793,788 		JBrowse link
G Wnt11 wingless-type MMTV integration site family, member 11 involved_in IGI (MGI:5424267|PMID:22569553) CACAO PMID:22569553 MGI:5424267 NCBI chr 7:98,835,084...98,854,747
Ensembl chr 7:98,835,112...98,855,195 		JBrowse link
G Wnt5a wingless-type MMTV integration site family, member 5A involved_in IGI (MGI:5424267|PMID:22569553) CACAO PMID:22569553 MGI:5424267 NCBI chr14:28,504,543...28,527,448
Ensembl chr14:28,504,750...28,527,448 		JBrowse link
positive regulation of mesodermal cell fate specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Wnt3a wingless-type MMTV integration site family, member 3A involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr11:59,248,036...59,290,751
Ensembl chr11:59,248,033...59,290,752 		JBrowse link
regulation of cardiac cell fate specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sox17 SRY (sex determining region Y)-box 17 involved_in IMP (MGI:3703823|PMID:17360443) BHF-UCL PMID:17360443 MGI:3703823 NCBI chr 1:4,490,928...4,497,426
Ensembl chr 1:4,490,931...4,497,354 		JBrowse link
regulation of endodermal cell fate specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dkk1 dickkopf WNT signaling pathway inhibitor 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr19:30,545,876...30,549,496
Ensembl chr19:30,545,863...30,549,665 		JBrowse link
regulation of heart induction by regulation of canonical Wnt signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pou5f1 POU domain, class 5, transcription factor 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr17:35,506,032...35,510,777
Ensembl chr17:35,506,018...35,510,772 		JBrowse link
regulation of inner ear auditory receptor cell fate specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Esrp1 epithelial splicing regulatory protein 1 involved_in IMP (MGI:5915403|PMID:29107558) UniProt PMID:29107558 MGI:5915403 NCBI chr 4:11,331,933...11,386,783
Ensembl chr 4:11,331,933...11,386,783 		JBrowse link
regulation of lateral mesodermal cell fate specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmpr1a bone morphogenetic protein receptor, type 1A acts_upstream_of_or_within IGI (MGI:3702797|PMID:16943278) MGI PMID:16943278 MGI:3702797 NCBI chr14:34,411,061...34,503,336
Ensembl chr14:34,410,734...34,503,341 		JBrowse link
G Fgfr1 fibroblast growth factor receptor 1 acts_upstream_of_or_within IGI (MGI:3702797|PMID:16943278) MGI PMID:16943278 MGI:3702797 NCBI chr 8:25,518,759...25,575,718
Ensembl chr 8:25,513,654...25,575,718 		JBrowse link
regulation of neural crest cell fate specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmpr1a bone morphogenetic protein receptor, type 1A NOT|involved_in IMP (MGI:3040576|PMID:15073157) BHF-UCL PMID:15073157 MGI:3040576 NCBI chr14:34,411,061...34,503,336
Ensembl chr14:34,410,734...34,503,341 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 23319
    regulation of biological process 12506
      regulation of cellular process 11950
        regulation of cell fate commitment 35
          regulation of cell fate specification 18
            activation of prostate induction by androgen receptor signaling pathway 1
            negative regulation of cell fate specification + 7
            positive regulation of cell fate specification + 4
            regulation of atrichoblast fate specification + 0
            regulation of cardiac cell fate specification + 2
            regulation of compound eye cone cell fate specification + 0
            regulation of ectodermal cell fate specification + 1
            regulation of endodermal cell fate specification + 3
            regulation of heart induction by regulation of canonical Wnt signaling pathway + 5
            regulation of inner ear auditory receptor cell fate specification + 1
            regulation of mesodermal cell fate specification + 6
            regulation of neural crest cell fate specification + 1
            regulation of retinal cone cell fate specification + 0
            regulation of trichoblast fate specification + 0
Path 2
Term Annotations click to browse term
  biological_process 23319
    cellular process 17443
      cellular developmental process 4700
        cell differentiation 4591
          cell fate commitment 287
            cell fate specification 102
              regulation of cell fate specification 18
                activation of prostate induction by androgen receptor signaling pathway 1
                negative regulation of cell fate specification + 7
                positive regulation of cell fate specification + 4
                regulation of atrichoblast fate specification + 0
                regulation of cardiac cell fate specification + 2
                regulation of compound eye cone cell fate specification + 0
                regulation of ectodermal cell fate specification + 1
                regulation of endodermal cell fate specification + 3
                regulation of heart induction by regulation of canonical Wnt signaling pathway + 5
                regulation of inner ear auditory receptor cell fate specification + 1
                regulation of mesodermal cell fate specification + 6
                regulation of neural crest cell fate specification + 1
                regulation of retinal cone cell fate specification + 0
                regulation of trichoblast fate specification + 0
paths to the root