Send us a Message



 Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap)  (beta) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer) Overgo Probe Designer
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease COVID-19 Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models PhenoMiner (Quantitative Phenotypes) Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes GERRC (Gene Editing Rat Resource Center) Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Poster Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

ONTOLOGY REPORT - ANNOTATIONS

Term:regulation of hair cycle
go back to main search page
Accession:GO:0042634 term browser browse the term
Definition:Any process that modulates the frequency, rate or extent of the cyclical phases of growth (anagen), regression (catagen), quiescence (telogen), and shedding (exogen) in the life of a hair.


show annotations for term's descendants           Sort by:
regulation of hair cycle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmal1 basic helix-loop-helix ARNT like 1 involved_in ISO
ISS		 (PMID:24005054)
GO_REF:0000024		 RGD
UniProt		 PMID:24005054 GO_REF:0000024 NCBI chr 1:167,331,756...167,430,235
Ensembl chr 1:167,331,633...167,430,231 		JBrowse link
G Clock clock circadian regulator involved_in ISO
IEA
ISS		 (PMID:24005054)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:24005054 GO_REF:0000024 GO_REF:0000107 NCBI chr14:31,908,542...31,992,673
Ensembl chr14:31,908,566...31,990,400 		JBrowse link
G Eps8l3 EPS8 like 3 involved_in ISO (PMID:23099647) RGD PMID:23099647 Ensembl chr 2:195,514,692...195,528,085 JBrowse link
G Fa2h fatty acid 2-hydroxylase acts_upstream_of_or_within ISO MGI:3829000 (MGI:5285470|PMID:21628453) RGD PMID:21628453 MGI:5285470 NCBI chr19:39,312,904...39,364,153
Ensembl chr19:39,312,906...39,364,153 		JBrowse link
G Nfatc1 nuclear factor of activated T-cells 1 acts_upstream_of_or_within ISO MGI:2181762 (MGI:5581807|PMID:18243104) RGD PMID:18243104 MGI:5581807 NCBI chr18:74,046,421...74,156,041
Ensembl chr18:74,046,904...74,156,028 		JBrowse link
G Nipbl NIPBL, cohesin loading factor involved_in ISO (PMID:15146186) RGD PMID:15146186 NCBI chr 2:57,399,443...57,586,770
Ensembl chr 2:57,399,445...57,565,899 		JBrowse link
G Per1 period circadian regulator 1 involved_in IEA
ISS
ISO		 GO_REF:0000107
GO_REF:0000024
(PMID:24005054)		 Ensembl
UniProt
RGD		 PMID:24005054 GO_REF:0000024 GO_REF:0000107 NCBI chr10:53,800,126...53,814,963
Ensembl chr10:53,805,535...53,814,431 		JBrowse link
negative regulation of hair cycle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Trpv3 transient receptor potential cation channel, subfamily V, member 3 involved_in ISO (PMID:21593771) RGD PMID:21593771 NCBI chr10:57,883,546...57,915,865
Ensembl chr10:57,883,546...57,913,296 		JBrowse link
negative regulation of hair follicle development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Inhba inhibin subunit beta A acts_upstream_of_or_within ISO (PMID:12514121) RGD PMID:12514121 NCBI chr17:49,091,635...49,111,573
Ensembl chr17:49,095,920...49,108,982 		JBrowse link
G Ngfr nerve growth factor receptor involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1857226 (MGI:1350519|PMID:10588868)		 Ensembl
RGD		 PMID:10588868 GO_REF:0000107 MGI:1350519 NCBI chr10:80,515,287...80,533,518
Ensembl chr10:80,515,299...80,533,518 		JBrowse link
G Smo smoothened, frizzled class receptor involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1934268|MGI:2445832 (MGI:3696007|PMID:17199044)		 Ensembl
RGD		 PMID:17199044 GO_REF:0000107 MGI:3696007 NCBI chr 4:58,344,101...58,372,828
Ensembl chr 4:58,343,529...58,373,829 		JBrowse link
negative regulation of hair follicle placode formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dkk4 dickkopf WNT signaling pathway inhibitor 4 acts_upstream_of_or_within ISO (MGI:3805070|PMID:18508042) RGD PMID:18508042 MGI:3805070 NCBI chr16:69,402,989...69,406,580
Ensembl chr16:69,402,989...69,406,580 		JBrowse link
negative regulation of timing of anagen term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fermt1 FERM domain containing kindlin 1 involved_in ISO (MGI:5571208|PMID:24681597) RGD PMID:24681597 MGI:5571208 NCBI chr 3:120,171,301...120,213,555
Ensembl chr 3:120,171,561...120,213,555 		JBrowse link
negative regulation of timing of catagen term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdh3 cadherin 3 involved_in ISO (PMID:22696062) RGD PMID:22696062 NCBI chr19:34,393,596...34,444,084
Ensembl chr19:34,393,727...34,444,084 		JBrowse link
positive regulation of hair cycle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tert telomerase reverse transcriptase involved_in ISO (MGI:3588604|PMID:16037417), (MGI:3589051|PMID:16107853) RGD PMID:16037417 PMID:16107853 MGI:3588604 MGI:3589051 NCBI chr 1:29,637,213...29,659,509
Ensembl chr 1:29,637,506...29,659,561 		JBrowse link
G Tsku tsukushi, small leucine rich proteoglycan involved_in ISS
ISO
IEA		 GO_REF:0000024
(MGI:5449316|PMID:22995554)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:22995554 GO_REF:0000024 GO_REF:0000107 MGI:5449316 NCBI chr 1:152,660,259...152,671,682
Ensembl chr 1:152,656,693...152,672,588 		JBrowse link
positive regulation of hair follicle development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxn1 forkhead box N1 involved_in ISO (MGI:5437206|PMID:21109991) RGD PMID:21109991 MGI:5437206 NCBI chr10:63,251,400...63,273,710
Ensembl chr10:63,251,400...63,273,710 		JBrowse link
G Fst follistatin acts_upstream_of_or_within ISO (PMID:12514121) RGD PMID:12514121 NCBI chr 2:46,123,260...46,130,584
Ensembl chr 2:46,123,439...46,130,571 		JBrowse link
G Hpse heparanase involved_in IEA
ISO		 GO_REF:0000107
(MGI:3574236|PMID:15793281)		 Ensembl
RGD		 PMID:15793281 GO_REF:0000107 MGI:3574236 NCBI chr14:8,896,593...8,937,011
Ensembl chr14:8,896,593...8,937,010 		JBrowse link
G Krt17 keratin 17 involved_in ISO (MGI:3624581|PMID:16702408) RGD PMID:16702408 MGI:3624581 NCBI chr10:85,178,673...85,183,392
Ensembl chr10:85,178,675...85,183,392 		JBrowse link
G Numa1 nuclear mitotic apparatus protein 1 involved_in ISO (MGI:5754878|PMID:26765568) RGD PMID:26765568 MGI:5754878 NCBI chr 1:156,297,907...156,372,855
Ensembl chr 1:156,326,259...156,372,855 		JBrowse link
G Tnf tumor necrosis factor involved_in ISO (MGI:3624581|PMID:16702408) RGD PMID:16702408 MGI:3624581 NCBI chr20:3,622,011...3,624,629
Ensembl chr20:3,622,011...3,624,629 		JBrowse link
G Tradd TNFRSF1A-associated via death domain involved_in ISO (MGI:3624581|PMID:16702408) RGD PMID:16702408 MGI:3624581 NCBI chr19:33,136,148...33,142,714
Ensembl chr19:33,136,138...33,142,638 		JBrowse link
positive regulation of timing of anagen term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Wnt10b Wnt family member 10B acts_upstream_of_or_within ISO (MGI:3772496|PMID:18155657) RGD PMID:18155657 MGI:3772496 NCBI chr 7:129,922,088...129,927,892
Ensembl chr 7:129,922,088...129,927,892 		JBrowse link
G Wnt5a Wnt family member 5A involved_in ISO (MGI:5571208|PMID:24681597) RGD PMID:24681597 MGI:5571208 NCBI chr16:3,695,667...3,718,234
Ensembl chr16:3,697,032...3,718,234 		JBrowse link
positive regulation of timing of catagen term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gal galanin and GMAP prepropeptide involved_in ISO (PMID:22329353) RGD PMID:22329353 NCBI chr 1:200,650,439...200,655,302
Ensembl chr 1:200,650,439...200,654,959 		JBrowse link
G Msx2 msh homeobox 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1926381 (MGI:1355063|PMID:10742104)		 Ensembl
RGD		 PMID:10742104 GO_REF:0000107 MGI:1355063 NCBI chr17:11,097,214...11,102,879
Ensembl chr17:11,097,103...11,102,879 		JBrowse link
G Tgfb2 transforming growth factor, beta 2 involved_in ISS
ISO		 GO_REF:0000024
(PMID:15955085)		 UniProt
RGD		 PMID:15955085 GO_REF:0000024 NCBI chr13:98,160,075...98,261,771
Ensembl chr13:98,160,087...98,261,405 		JBrowse link
regulation of hair cycle by canonical Wnt signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdh3 cadherin 3 involved_in ISO (PMID:22696062) RGD PMID:22696062 NCBI chr19:34,393,596...34,444,084
Ensembl chr19:34,393,727...34,444,084 		JBrowse link
regulation of hair follicle development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hpse heparanase involved_in ISO (PMID:18557927) RGD PMID:18557927 NCBI chr14:8,896,593...8,937,011
Ensembl chr14:8,896,593...8,937,010 		JBrowse link
G Mysm1 myb-like, SWIRM and MPN domains 1 acts_upstream_of_or_within ISO MGI:4362924 (MGI:5569175|PMID:24721909) RGD PMID:24721909 MGI:5569175 NCBI chr 5:109,761,345...109,826,652
Ensembl chr 5:109,776,286...109,819,967 		JBrowse link
G Smad4 SMAD family member 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2386393 (MGI:3820455|PMID:18692037)		 Ensembl
RGD		 PMID:18692037 GO_REF:0000107 MGI:3820455 NCBI chr18:67,243,742...67,274,438
Ensembl chr18:67,243,742...67,274,438 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19903
    multicellular organismal process 9260
      regulation of multicellular organismal process 3380
        regulation of hair cycle 30
          negative regulation of hair cycle 1
          positive regulation of hair cycle 2
          regulation of hair cycle by BMP signaling pathway 0
          regulation of hair cycle by canonical Wnt signaling pathway 1
          regulation of hair follicle development + 20
Path 2
Term Annotations click to browse term
  biological_process 19903
    multicellular organismal process 9260
      molting cycle 131
        hair cycle 131
          regulation of hair cycle 30
            negative regulation of hair cycle 1
            positive regulation of hair cycle 2
            regulation of hair cycle by BMP signaling pathway 0
            regulation of hair cycle by canonical Wnt signaling pathway 1
            regulation of hair follicle development + 20
paths to the root