Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

ONTOLOGY REPORT - ANNOTATIONS

Term:inner ear auditory receptor cell differentiation
go back to main search page
Accession:GO:0042491 term browser browse the term
Definition:The process in which a relatively unspecialized inner cell acquires specialized features of an auditory hair cell.
Comment:Note that this term refers to the mechanosensory hair cells of the inner ear.
Synonyms:exact_synonym: auditory hair cell differentiation
 related_synonym: auditory receptor cell differentiation


show annotations for term's descendants           Sort by:
inner ear auditory receptor cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atoh1 atonal bHLH transcription factor 1 acts_upstream_of_or_within ISO MGI:2155983|MGI:2155984 (PMID:11973280), (PMID:15543141)
(PMID:19154718)		 RGD PMID:11973280 PMID:15543141 PMID:19154718 NCBI chr 4:93,912,068...93,914,163
Ensembl chr 4:93,912,068...93,914,154 		JBrowse link
G Bmp4 bone morphogenetic protein 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:95524 (PMID:17555714)		 Ensembl
RGD		 PMID:17555714 GO_REF:0000107 NCBI chr15:19,618,538...19,633,494
Ensembl chr15:19,618,542...19,623,306 		JBrowse link
G Cdh23 cadherin-related 23 acts_upstream_of_or_within ISO MGI:1856228 (PMID:12121736) RGD PMID:12121736 NCBI chr20:28,240,643...28,622,490
Ensembl chr20:28,240,645...28,622,419 		JBrowse link
G Clrn2 clarin 2 acts_upstream_of_or_within ISO MGI:5792002|MGI:6458758 (PMID:31448880) RGD PMID:31448880 NCBI chr14:65,656,029...65,666,325
Ensembl chr14:65,656,550...65,666,193 		JBrowse link
G Cux1 cut-like homeobox 1 acts_upstream_of_or_within ISO MGI:2388352 (PMID:11544187) RGD PMID:11544187 NCBI chr12:20,107,062...20,425,868
Ensembl chr12:20,107,311...20,425,866 		JBrowse link
G Dll1 delta like canonical Notch ligand 1 involved_in
acts_upstream_of		 IEA
ISO		 GO_REF:0000107
MGI:1932522|MGI:3044907 (PMID:16495313)		 Ensembl
RGD		 PMID:16495313 GO_REF:0000107 NCBI chr 1:56,312,062...56,320,177
Ensembl chr 1:56,312,066...56,320,179 		JBrowse link
G Fgf2 fibroblast growth factor 2 acts_upstream_of ISO (PMID:12417662) RGD PMID:12417662 NCBI chr 2:120,236,328...120,290,673
Ensembl chr 2:120,236,328...120,291,221 		JBrowse link
G Fgf20 fibroblast growth factor 20 acts_upstream_of_or_within ISO (PMID:18524904) RGD PMID:18524904 NCBI chr16:52,030,549...52,038,201
Ensembl chr16:52,010,194...52,038,204 		JBrowse link
G Fgfr3 fibroblast growth factor receptor 3 acts_upstream_of
acts_upstream_of_or_within		 ISO MGI:1931521 (PMID:17117437)
MGI:1931521|MGI:88180 (PMID:17117437), (PMID:17555714), (PMID:17557302)		 RGD PMID:17117437 PMID:17555714 PMID:17557302 NCBI chr14:76,987,242...77,002,671
Ensembl chr14:76,987,993...77,003,341 		JBrowse link
G Gfi1 growth factor independent 1 transcriptional repressor acts_upstream_of_or_within ISO MGI:2449921 (PMID:12441305) RGD PMID:12441305 NCBI chr14:2,040,576...2,056,874
Ensembl chr14:2,042,434...2,051,814 		JBrowse link
G Grxcr1 glutaredoxin and cysteine rich domain containing 1 acts_upstream_of_or_within ISO MGI:2681910 (PMID:12405956) RGD PMID:12405956 NCBI chr14:40,004,169...40,126,571
Ensembl chr14:40,004,169...40,126,571 		JBrowse link
G Gsdme gasdermin E acts_upstream_of_or_within ISO MGI:3583715 (PMID:16023581) RGD PMID:16023581 NCBI chr 4:79,258,799...79,321,129
Ensembl chr 4:79,257,804...79,320,806 		JBrowse link
G Hes1 hes family bHLH transcription factor 1 involved_in
acts_upstream_of		 IEA
ISO		 GO_REF:0000107
MGI:104876|MGI:1341800 (PMID:21300049)		 Ensembl
RGD		 PMID:21300049 GO_REF:0000107 NCBI chr11:70,705,763...70,708,176
Ensembl chr11:70,705,764...70,708,192 		JBrowse link
G Hes5 hes family bHLH transcription factor 5 acts_upstream_of ISO MGI:104853|MGI:1341800 (PMID:21300049) RGD PMID:21300049 NCBI chr 5:165,522,138...165,523,684
Ensembl chr 5:165,522,234...165,523,001 		JBrowse link
G Jag1 jagged canonical Notch ligand 1 acts_upstream_of_or_within
involved_in		 IMP
ISO
IEA		 MGI:1932522|MGI:3623344 (PMID:16495313)
GO_REF:0000107		 RGD
Ensembl		 PMID:16495313 PMID:10887092 GO_REF:0000107, RGD:1582345 NCBI chr 3:124,406,783...124,442,220
Ensembl chr 3:124,406,794...124,442,209 		JBrowse link
G Kcnma1 potassium calcium-activated channel subfamily M alpha 1 acts_upstream_of_or_within ISO MGI:3050114 (PMID:15328414), (PMID:17074442) RGD PMID:15328414 PMID:17074442 NCBI chr15:302,480...1,007,675
Ensembl chr15:302,214...1,001,198 		JBrowse link
G Mcoln3 mucolipin TRP cation channel 3 acts_upstream_of_or_within ISO MGI:1856230 (PMID:12403827) RGD PMID:12403827 NCBI chr 2:235,008,716...235,042,885
Ensembl chr 2:234,966,010...235,043,047 		JBrowse link
G Myo6 myosin VI involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
MGI:1856555 (PMID:10525338), (PMID:5980120), (PMID:7493015)		 GO_Central
RGD		 PMID:5980120 PMID:7493015 PMID:10525338 GO_REF:0000033 NCBI chr 8:81,087,157...81,242,022
Ensembl chr 8:81,087,139...81,239,292 		JBrowse link
G Myo7a myosin VIIA acts_upstream_of_or_within ISO MGI:1860092|MGI:2155422|MGI:3511858 (PMID:11753415), (PMID:12121736), (PMID:15389316) RGD PMID:11753415 PMID:12121736 PMID:15389316 NCBI chr 1:152,342,611...152,414,171
Ensembl chr 1:152,344,448...152,414,157 		JBrowse link
G Pcdh15 protocadherin related 15 acts_upstream_of_or_within ISO MGI:1856394 (PMID:16481439) RGD PMID:16481439 NCBI chr20:13,997,094...15,496,446
Ensembl chr20:13,963,565...15,494,719 		JBrowse link
G Pls3 plastin 3 IEP RGD PMID:12378542 RGD:731234 NCBI chr  X:111,589,193...111,683,908
Ensembl chr  X:111,589,254...111,683,891 		JBrowse link
G Pou4f3 POU class 4 homeobox 3 acts_upstream_of_or_within ISO MGI:1857425|MGI:2176270 (PMID:12585968), (PMID:8637595) RGD PMID:8637595 PMID:12585968 NCBI chr18:34,390,205...34,392,797
Ensembl chr18:34,390,205...34,392,797 		JBrowse link
G Ush1c USH1 protein network component harmonin involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
MGI:2651858|MGI:2651859 (PMID:14519688)		 GO_Central
RGD		 PMID:14519688 GO_REF:0000033 NCBI chr 1:96,695,303...96,743,671
Ensembl chr 1:96,695,307...96,743,671 		JBrowse link
G Ush2a usherin involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:3702040 (PMID:17360538)		 Ensembl
RGD		 PMID:17360538 GO_REF:0000107 NCBI chr13:99,837,445...100,503,935
Ensembl chr13:99,837,445...100,503,922 		JBrowse link
auditory receptor cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alg10 ALG10, alpha-1,2-glucosyltransferase involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 7:121,335,048...121,345,517
Ensembl chr 7:121,335,042...121,340,308 		JBrowse link
G Clrn1 clarin 1 acts_upstream_of_or_within ISO MGI:3850171 (PMID:19414487) RGD PMID:19414487 NCBI chr 2:143,084,030...143,130,948
Ensembl chr 2:143,084,030...143,130,948 		JBrowse link
G Elmod3 ELMO domain containing 3 acts_upstream_of_or_within ISO MGI:6455516 (PMID:31628468) RGD PMID:31628468 NCBI chr 4:104,614,665...104,653,122
Ensembl chr 4:104,614,676...104,653,053 		JBrowse link
G Fgfr1 Fibroblast growth factor receptor 1 acts_upstream_of_or_within ISO MGI:3574787 (PMID:15630379) RGD PMID:15630379 NCBI chr16:66,491,930...66,547,161
Ensembl chr16:66,494,042...66,547,350 		JBrowse link
G Kcnq1 potassium voltage-gated channel subfamily Q member 1 involved_in IEA
ISO		 GO_REF:0000107
MGI:2680653 (PMID:26084842)		 Ensembl
RGD		 PMID:26084842 GO_REF:0000107 NCBI chr 1:198,291,711...198,624,683
Ensembl chr 1:198,291,766...198,624,669 		JBrowse link
G Lrtomt leucine rich transmembrane and O-methyltransferase domain containing involved_in ISO (MGI:3799635|PMID:18794526) RGD PMID:18794526 MGI:3799635 NCBI chr 1:156,266,655...156,268,704
Ensembl chr 1:156,266,655...156,268,704 		JBrowse link
G Pafah1b1 platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 involved_in ISO (MGI:5477842|PMID:23533177) RGD PMID:23533177 MGI:5477842 NCBI chr10:59,533,042...59,591,808
Ensembl chr10:59,534,117...59,591,808 		JBrowse link
G Pdzd7 PDZ domain containing 7 acts_upstream_of_or_within ISO MGI:4433578 (PMID:24334608) RGD PMID:24334608 NCBI chr 1:243,888,295...243,907,778
Ensembl chr 1:243,888,281...243,906,839 		JBrowse link
G Slc4a7 solute carrier family 4 member 7 involved_in
acts_upstream_of_or_within		 IEA
IBA
ISO		 GO_REF:0000118
GO_REF:0000033
MGI:2682641 (PMID:12808454)		 TreeGrafter
GO_Central
RGD		 PMID:12808454 GO_REF:0000033 GO_REF:0000118 NCBI chr15:10,585,307...10,664,780
Ensembl chr15:10,588,979...10,664,781 		JBrowse link
G Tmc1 transmembrane channel-like 1 acts_upstream_of_or_within ISO MGI:5427097 (PMID:22105175) RGD PMID:22105175 NCBI chr 1:218,275,249...218,446,013
Ensembl chr 1:218,276,417...218,445,955 		JBrowse link
auditory receptor cell fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dll1 delta like canonical Notch ligand 1 involved_in NAS PMID:10878608 UniProt PMID:10878608 RGD:8553270 NCBI chr 1:56,312,062...56,320,177
Ensembl chr 1:56,312,066...56,320,179 		JBrowse link
G Jag2 jagged canonical Notch ligand 2 involved_in ISS
ISO
IEA		 PMID:10080181
(MGI:1332721|PMID:10080181)
GO_REF:0000107		 RGD
Ensembl		 PMID:10080181 PMID:10080181 GO_REF:0000107 MGI:1332721, RGD:8553713 NCBI chr 6:131,983,059...132,005,665
Ensembl chr 6:131,983,056...132,005,818 		JBrowse link
G Notch1 notch receptor 1 acts_upstream_of_or_within ISO MGI:3044585|MGI:3046196 (PMID:19154718) RGD PMID:19154718 NCBI chr 3:9,277,955...9,323,531
Ensembl chr 3:9,278,086...9,323,531 		JBrowse link
G Rbpj recombination signal binding protein for immunoglobulin kappa J region acts_upstream_of_or_within ISO MGI:3046196|MGI:3583755 (PMID:19154718) RGD PMID:19154718 NCBI chr14:57,338,493...57,523,330
Ensembl chr14:57,338,507...57,523,353 		JBrowse link
auditory receptor cell fate determination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atoh1 atonal bHLH transcription factor 1 acts_upstream_of_or_within ISO (PMID:16407553) RGD PMID:16407553 NCBI chr 4:93,912,068...93,914,163
Ensembl chr 4:93,912,068...93,914,154 		JBrowse link
auditory receptor cell fate specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atoh1 atonal bHLH transcription factor 1 acts_upstream_of_or_within ISO MGI:2155983 (PMID:10364557) RGD PMID:10364557 NCBI chr 4:93,912,068...93,914,163
Ensembl chr 4:93,912,068...93,914,154 		JBrowse link
auditory receptor cell morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mir96 microRNA 96 acts_upstream_of_or_within ISO MGI:4354110 (PMID:19363478) RGD PMID:19363478 NCBI chr 4:58,788,411...58,788,516
Ensembl chr 4:58,788,411...58,788,516 		JBrowse link
G Rac1 Rac family small GTPase 1 acts_upstream_of_or_within ISO MGI:2663662|MGI:2663669 (PMID:20016102) RGD PMID:20016102 NCBI chr12:11,037,028...11,057,251
Ensembl chr12:11,036,698...11,057,251 		JBrowse link
G Scrib scribble planar cell polarity protein acts_upstream_of_or_within ISO MGI:2139764 (PMID:20215345) RGD PMID:20215345 NCBI chr 7:107,759,343...107,782,364
Ensembl chr 7:107,759,343...107,782,331 		JBrowse link
G Sec24b SEC24 homolog B, COPII coat complex component acts_upstream_of_or_within ISO MGI:2145950|MGI:4440621 (PMID:20215345) RGD PMID:20215345 NCBI chr 2:218,562,670...218,632,753
Ensembl chr 2:218,562,676...218,632,699 		JBrowse link
G Slitrk6 SLIT and NTRK-like family, member 6 acts_upstream_of_or_within ISO MGI:4417931 (PMID:19936227) RGD PMID:19936227 NCBI chr15:87,563,506...87,570,125
Ensembl chr15:87,563,322...87,570,393 		JBrowse link
G Wdpcp WD repeat containing planar cell polarity effector involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:5558098 (PMID:24302887)		 Ensembl
RGD		 PMID:24302887 GO_REF:0000107 NCBI chr14:95,645,955...95,977,120
Ensembl chr14:95,646,038...95,977,113 		JBrowse link
auditory receptor cell stereocilium organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ankrd24 ankyrin repeat domain 24 involved_in ISO (MGI:6885507|PMID:35175278) RGD PMID:35175278 MGI:6885507 NCBI chr 7:8,061,634...8,081,142
Ensembl chr 7:8,061,953...8,081,142 		JBrowse link
G Atp2b2 ATPase plasma membrane Ca2+ transporting 2 acts_upstream_of_or_within ISO MGI:1856799 (PMID:11875276) RGD PMID:11875276 NCBI chr 4:146,894,602...147,208,060
Ensembl chr 4:146,896,332...147,140,665 		JBrowse link
G Cdh23 cadherin-related 23 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1856228|MGI:1856681|MGI:1891428|MGI:2154548|MGI:2154549 (PMID:11138008), (PMID:11322776), (PMID:12121736), (PMID:15537665), (PMID:17050716), (PMID:23217710), (PMID:7610888), (PMID:8790740), (PMID:9039475)		 Ensembl
RGD		 PMID:7610888 PMID:8790740 PMID:9039475 PMID:11138008 PMID:11322776 More... GO_REF:0000107 NCBI chr20:28,240,643...28,622,490
Ensembl chr20:28,240,645...28,622,419 		JBrowse link
G Clic5 chloride intracellular channel 5 acts_upstream_of_or_within ISO MGI:3663254 (PMID:17021174) RGD PMID:17021174 NCBI chr 9:16,710,980...16,813,502
Ensembl chr 9:16,710,980...16,813,427 		JBrowse link
G Clrn1 clarin 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:3850171 (PMID:19414487), (PMID:19423712)		 Ensembl
RGD		 PMID:19414487 PMID:19423712 GO_REF:0000107 NCBI chr 2:143,084,030...143,130,948
Ensembl chr 2:143,084,030...143,130,948 		JBrowse link
G Clrn2 clarin 2 involved_in ISO (MGI:6810803|PMID:33496845) RGD PMID:33496845 MGI:6810803 NCBI chr14:65,656,029...65,666,325
Ensembl chr14:65,656,550...65,666,193 		JBrowse link
G Grxcr2 glutaredoxin and cysteine rich domain containing 2 acts_upstream_of_or_within ISO MGI:2139535|MGI:6281113|MGI:6281114 (PMID:30380417) RGD PMID:30380417 NCBI chr18:33,984,689...33,998,094
Ensembl chr18:33,984,689...33,998,094 		JBrowse link
G Lhfpl5 LHFPL tetraspan subfamily member 5 acts_upstream_of_or_within ISO MGI:3055797|MGI:3718054 (PMID:15905332), (PMID:17876667), (PMID:23217710) RGD PMID:15905332 PMID:17876667 PMID:23217710 NCBI chr20:6,632,324...6,642,534
Ensembl chr20:6,632,362...6,642,532 		JBrowse link
G Myo3a myosin IIIA involved_in ISO MGI:2448580 (PMID:26754646) RGD PMID:26754646 NCBI chr17:84,543,465...84,759,562
Ensembl chr17:84,543,552...84,759,042 		JBrowse link
G Myo3b myosin IIIB involved_in ISO MGI:2183924 (PMID:26754646) RGD PMID:26754646 NCBI chr 3:54,820,225...55,228,518
Ensembl chr 3:54,820,251...55,227,373 		JBrowse link
G Myo7a myosin VIIA acts_upstream_of_or_within ISO MGI:1860092|MGI:2155422 (PMID:11753415), (PMID:12121736), (PMID:17050716) RGD PMID:11753415 PMID:12121736 PMID:17050716 NCBI chr 1:152,342,611...152,414,171
Ensembl chr 1:152,344,448...152,414,157 		JBrowse link
G Nherf1 NHERF family PDZ scaffold protein 1 acts_upstream_of_or_within ISO MGI:3526430 (PMID:24920589) RGD PMID:24920589 NCBI chr10:100,403,189...100,420,290
Ensembl chr10:100,403,069...100,420,598 		JBrowse link
G Pcdh15 protocadherin related 15 acts_upstream_of_or_within ISO MGI:1855958|MGI:1856394|MGI:1856396|MGI:1890219|MGI:2151877|MGI:3505691 (PMID:10978835), (PMID:11124469), (PMID:15537665), (PMID:16887306), (PMID:23217710) RGD PMID:10978835 PMID:11124469 PMID:15537665 PMID:16887306 PMID:23217710 NCBI chr20:13,997,094...15,496,446
Ensembl chr20:13,963,565...15,494,719 		JBrowse link
G Pdzd7 PDZ domain containing 7 involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
MGI:4433578 (PMID:24334608)		 GO_Central
RGD		 PMID:24334608 GO_REF:0000033 NCBI chr 1:243,888,295...243,907,778
Ensembl chr 1:243,888,281...243,906,839 		JBrowse link
G Pls1 plastin 1 involved_in ISO (MGI:5608770|PMID:25124451) RGD PMID:25124451 MGI:5608770 NCBI chr 8:96,316,703...96,426,592
Ensembl chr 8:96,317,849...96,385,195 		JBrowse link
G Rest RE1-silencing transcription factor involved_in ISS
ISO		 GO_REF:0000024
(MGI:6193260|PMID:29961578)		 UniProt
RGD		 PMID:29961578 GO_REF:0000024 MGI:6193260 NCBI chr14:30,859,109...30,879,828
Ensembl chr14:30,862,553...30,894,354 		JBrowse link
G Ripor2 RHO family interacting cell polarization regulator 2 involved_in ISO (MGI:5789047|PMID:27269051) RGD PMID:27269051 MGI:5789047 NCBI chr17:40,323,748...40,547,482
Ensembl chr17:40,323,867...40,548,092 		JBrowse link
G Scrib scribble planar cell polarity protein acts_upstream_of_or_within ISO MGI:2139764 (PMID:20215345) RGD PMID:20215345 NCBI chr 7:107,759,343...107,782,364
Ensembl chr 7:107,759,343...107,782,331 		JBrowse link
G Sec24b SEC24 homolog B, COPII coat complex component acts_upstream_of_or_within ISO MGI:2145950|MGI:4440621 (PMID:20215345) RGD PMID:20215345 NCBI chr 2:218,562,670...218,632,753
Ensembl chr 2:218,562,676...218,632,699 		JBrowse link
G Sod1 superoxide dismutase 1 involved_in
acts_upstream_of_or_within		 ISS
ISO		 GO_REF:0000024
MGI:1857872 (PMID:10464373), (PMID:10466888)		 UniProt
RGD		 PMID:10464373 PMID:10466888 GO_REF:0000024 NCBI chr11:29,456,673...29,462,249
Ensembl chr11:29,456,558...29,462,249 		JBrowse link
G Strc stereocilin involved_in
acts_upstream_of_or_within		 ISO (MGI:5430850|PMID:21165971)
MGI:109575|MGI:3818633 (PMID:18849963), (PMID:30801007)		 RGD PMID:18849963 PMID:21165971 PMID:30801007 MGI:5430850 NCBI chr 3:108,335,920...108,355,114
Ensembl chr 3:108,335,747...108,354,134 		JBrowse link
G Tecta tectorin alpha acts_upstream_of_or_within ISO MGI:2153816 (PMID:30801007) RGD PMID:30801007 NCBI chr 8:42,707,962...42,779,726
Ensembl chr 8:42,707,962...42,779,707 		JBrowse link
G Tprn taperin involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
MGI:2685697 (PMID:30380417)		 GO_Central
RGD		 PMID:30380417 GO_REF:0000033 NCBI chr 3:8,076,164...8,083,642
Ensembl chr 3:8,075,137...8,083,642 		JBrowse link
G Triobp TRIO and F-actin binding protein acts_upstream_of_or_within ISO MGI:4881773 (PMID:20510926) RGD PMID:20510926 NCBI chr 7:110,505,916...110,569,301
Ensembl chr 7:110,506,248...110,562,474 		JBrowse link
G Whrn whirlin involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 GO_REF:0000107
MGI:4432119 (PMID:27117407)
GO_REF:0000033
GO_REF:0000118		 Ensembl
RGD
GO_Central
TreeGrafter		 PMID:27117407 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 5:76,828,308...76,911,945
Ensembl chr 5:76,828,301...76,912,223 		JBrowse link
negative regulation of inner ear auditory receptor cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dll1 delta like canonical Notch ligand 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1932522|MGI:3044907 (PMID:16495313)		 Ensembl
RGD		 PMID:16495313 GO_REF:0000107 NCBI chr 1:56,312,062...56,320,177
Ensembl chr 1:56,312,066...56,320,179 		JBrowse link
G Fgfr3 fibroblast growth factor receptor 3 acts_upstream_of_or_within ISO MGI:1931521 (PMID:17117437) RGD PMID:17117437 NCBI chr14:76,987,242...77,002,671
Ensembl chr14:76,987,993...77,003,341 		JBrowse link
G Hes1 hes family bHLH transcription factor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:104876|MGI:1341800|MGI:2149672 (PMID:11023859), (PMID:11425898), (PMID:21300049)		 Ensembl
RGD		 PMID:11023859 PMID:11425898 PMID:21300049 GO_REF:0000107 NCBI chr11:70,705,763...70,708,176
Ensembl chr11:70,705,764...70,708,192 		JBrowse link
G Hes5 hes family bHLH transcription factor 5 acts_upstream_of_or_within ISO MGI:104853|MGI:1341800|MGI:2149674 (PMID:11425898), (PMID:21300049) RGD PMID:11425898 PMID:21300049 NCBI chr 5:165,522,138...165,523,684
Ensembl chr 5:165,522,234...165,523,001 		JBrowse link
G Notch1 notch receptor 1 acts_upstream_of_or_within ISO MGI:3044585 (PMID:25535395) RGD PMID:25535395 NCBI chr 3:9,277,955...9,323,531
Ensembl chr 3:9,278,086...9,323,531 		JBrowse link
positive regulation of inner ear auditory receptor cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atoh1 atonal bHLH transcription factor 1 acts_upstream_of_or_within ISO (PMID:11023859), (PMID:19154718) RGD PMID:11023859 PMID:19154718 NCBI chr 4:93,912,068...93,914,163
Ensembl chr 4:93,912,068...93,914,154 		JBrowse link
G Fgf2 fibroblast growth factor 2 acts_upstream_of_or_within ISO (PMID:12417662) RGD PMID:12417662 NCBI chr 2:120,236,328...120,290,673
Ensembl chr 2:120,236,328...120,291,221 		JBrowse link
regulation of inner ear auditory receptor cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hey1 hes-related family bHLH transcription factor with YRPW motif 1 acts_upstream_of_or_within ISO MGI:104853|MGI:104876 (PMID:21300049) RGD PMID:21300049 NCBI chr 2:93,096,605...93,100,316
Ensembl chr 2:93,095,498...93,100,312 		JBrowse link
G Hey2 hes-related family bHLH transcription factor with YRPW motif 2 acts_upstream_of_or_within ISO MGI:104654 (PMID:19154718) RGD PMID:19154718 NCBI chr 1:26,822,131...26,832,218
Ensembl chr 1:26,822,131...26,832,218 		JBrowse link
G Mycl MYCL proto-oncogene, bHLH transcription factor acts_upstream_of_or_within ISO MGI:97357 (PMID:23022312) RGD PMID:23022312 NCBI chr 5:135,274,713...135,281,584
Ensembl chr 5:135,274,748...135,281,582 		JBrowse link
G Mycn MYCN proto-oncogene, bHLH transcription factor involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:96799 (PMID:23022312)		 Ensembl
RGD		 PMID:23022312 GO_REF:0000107 NCBI chr 6:35,717,764...35,723,590
Ensembl chr 6:35,717,764...35,723,590 		JBrowse link
G Notch1 notch receptor 1 acts_upstream_of_or_within ISO MGI:3044585 (PMID:25535395) RGD PMID:25535395 NCBI chr 3:9,277,955...9,323,531
Ensembl chr 3:9,278,086...9,323,531 		JBrowse link
regulation of inner ear auditory receptor cell fate specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Esrp1 epithelial splicing regulatory protein 1 involved_in ISS
ISO		 GO_REF:0000024
(MGI:5915403|PMID:29107558)		 UniProt
RGD		 PMID:29107558 GO_REF:0000024 MGI:5915403 NCBI chr 5:24,427,611...24,482,157
Ensembl chr 5:24,428,717...24,482,062 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20292
    developmental process 7042
      anatomical structure development 6550
        inner ear development 252
          inner ear receptor cell differentiation 92
            inner ear auditory receptor cell differentiation 65
              auditory receptor cell development + 37
              auditory receptor cell fate commitment + 6
              negative regulation of inner ear auditory receptor cell differentiation + 5
              positive regulation of inner ear auditory receptor cell differentiation 2
              regulation of inner ear auditory receptor cell differentiation + 12
Path 2
Term Annotations click to browse term
  biological_process 20292
    developmental process 7042
      anatomical structure development 6550
        multicellular organism development 5276
          system development 4559
            nervous system development 2819
              neurogenesis 2091
                generation of neurons 1803
                  neuron differentiation 1721
                    mechanoreceptor differentiation 100
                      inner ear receptor cell differentiation 92
                        inner ear auditory receptor cell differentiation 65
                          auditory receptor cell development + 37
                          auditory receptor cell fate commitment + 6
                          negative regulation of inner ear auditory receptor cell differentiation + 5
                          positive regulation of inner ear auditory receptor cell differentiation 2
                          regulation of inner ear auditory receptor cell differentiation + 12
paths to the root