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ONTOLOGY REPORT - ANNOTATIONS


Term:odontogenesis
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Accession:GO:0042476 term browser browse the term
Definition:The process whose specific outcome is the progression of a tooth or teeth over time, from formation to the mature structure(s). A tooth is any hard bony, calcareous, or chitinous organ found in the mouth or pharynx of an animal and used in procuring or masticating food.
Synonyms:exact_synonym: odontogeny;   odontosis;   tooth morphogenesis
 narrow_synonym: odontogenesis of calcareous or chitinous tooth
 related_synonym: tooth development
 alt_id: GO:0042477
 xref: Wikipedia:Odontogenesis
 never_in_taxon: NCBITaxon:8782 ! Aves



show annotations for term's descendants           Sort by:
 
odontogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acp4 acid phosphatase 4 involved_in ISO (PMID:27843125) RGD PMID:27843125 NCBI chr 1:94,736,376...94,751,871
Ensembl chr 1:94,735,514...94,744,623
JBrowse link
G Apc APC regulator of WNT signaling pathway acts_upstream_of ISO MGI:3688435 (MGI:3688426|PMID:17002498) RGD PMID:17002498 MGI:3688426 NCBI chr18:25,828,558...25,925,511
Ensembl chr18:25,864,222...25,922,696
JBrowse link
G Aqp1 aquaporin 1 involved_in ISO (PMID:12522663) RGD PMID:12522663 NCBI chr 4:84,482,512...84,494,690
Ensembl chr 4:84,482,512...84,494,690
JBrowse link
G Aqp3 aquaporin 3 (Gill blood group) involved_in ISO
IEA
(PMID:12522663)
GO_REF:0000107
RGD
Ensembl
PMID:12522663 GO_REF:0000107 NCBI chr 5:56,239,200...56,244,718
Ensembl chr 5:56,239,201...56,244,720
JBrowse link
G Aqp5 aquaporin 5 involved_in ISO (PMID:12522663) RGD PMID:12522663 NCBI chr 7:130,722,675...130,726,207
Ensembl chr 7:130,721,748...130,726,209
JBrowse link
G Aqp6 aquaporin 6 involved_in ISO (PMID:12522663) RGD PMID:12522663 NCBI chr 7:130,732,216...130,735,149
Ensembl chr 7:130,633,579...130,735,194
Ensembl chr 7:130,633,579...130,735,194
JBrowse link
G Axin2 axin 2 involved_in ISO
IEA
(PMID:15042511), (PMID:16432638)
GO_REF:0000107
RGD
Ensembl
PMID:15042511 PMID:16432638 GO_REF:0000107 NCBI chr10:93,893,830...93,927,042
Ensembl chr10:93,899,245...93,926,231
JBrowse link
G Bcor BCL6 co-repressor involved_in ISO (PMID:17517692) RGD PMID:17517692 NCBI chr  X:10,609,756...10,729,613
Ensembl chr  X:10,687,732...10,729,613
JBrowse link
G Bglap bone gamma-carboxyglutamate protein IEP RGD PMID:3497183 RGD:2316177 NCBI chr 2:173,838,518...173,839,495
Ensembl chr 2:173,838,518...173,839,495
JBrowse link
G Bmp4 bone morphogenetic protein 4 involved_in IEP
ISS
ISO
GO_REF:0000024
UniProtKB:P13297 (PMID:11023873)
UniProt
RGD
PMID:11023873 PMID:16416307 GO_REF:0000024, RGD:2289007 NCBI chr15:19,618,538...19,633,494
Ensembl chr15:19,618,542...19,623,306
JBrowse link
G Csf1 colony stimulating factor 1 IMP RGD PMID:12379742 RGD:628338 NCBI chr 2:195,377,215...195,396,608
Ensembl chr 2:195,377,215...195,411,704
JBrowse link
G Dspp dentin sialophosphoprotein acts_upstream_of_or_within IEP
ISO
MGI:2653208 (MGI:5912858|PMID:25027178) RGD PMID:25027178 PMID:28595095 MGI:5912858, RGD:12911016 NCBI chr14:5,565,562...5,571,669
Ensembl chr14:5,565,629...5,571,672
JBrowse link
G Enpp1 ectonucleotide pyrophosphatase/phosphodiesterase 1 involved_in ISO MGI:5607149 (MGI:6431370|PMID:29533727) RGD PMID:29533727 MGI:6431370 NCBI chr 1:20,698,746...20,763,741
Ensembl chr 1:20,698,764...20,763,715
JBrowse link
G Erbb3 erb-b2 receptor tyrosine kinase 3 IEP RGD PMID:12112465 RGD:727391 NCBI chr 7:994,549...1,015,876
Ensembl chr 7:996,225...1,015,525
JBrowse link
G Erbb4 erb-b2 receptor tyrosine kinase 4 IEP RGD PMID:12112465 RGD:727391 NCBI chr 9:69,523,733...70,596,743
Ensembl chr 9:69,531,481...70,596,595
JBrowse link
G Fgf8 fibroblast growth factor 8 involved_in IEP
ISO
(PMID:17394220) RGD PMID:17394220 PMID:16416307 RGD:2289007 NCBI chr 1:244,584,477...244,590,359
Ensembl chr 1:244,584,652...244,590,359
JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 acts_upstream_of_or_within ISO MGI:2153811 (MGI:3763776|PMID:17951031) RGD PMID:17951031 MGI:3763776 NCBI chr 1:184,745,418...184,850,655
Ensembl chr 1:184,745,420...184,850,626
JBrowse link
G Fmod fibromodulin IEP RGD PMID:12941075 RGD:2315082 NCBI chr13:45,493,517...45,504,134
Ensembl chr13:45,493,517...45,504,133
JBrowse link
G Gas1 growth arrest-specific 1 involved_in ISO (MGI:3838072|PMID:19211681) RGD PMID:19211681 MGI:3838072 NCBI chr17:4,482,014...4,485,155 JBrowse link
G Id3 inhibitor of DNA binding 3, HLH protein acts_upstream_of_or_within ISO (PMID:7655079) RGD PMID:7655079 NCBI chr 5:148,372,784...148,374,353
Ensembl chr 5:148,372,762...148,374,349
JBrowse link
G Inhba inhibin subunit beta A involved_in ISS
ISO
GO_REF:0000024
UniProtKB:Q04999 (PMID:10932194)
UniProt
RGD
PMID:10932194 GO_REF:0000024 NCBI chr17:49,091,635...49,111,573
Ensembl chr17:49,095,920...49,108,982
JBrowse link
G Lamb1 laminin subunit beta 1 involved_in ISO (PMID:15894315) RGD PMID:15894315 NCBI chr 6:47,835,492...47,902,585
Ensembl chr 6:47,835,525...47,902,585
JBrowse link
G Mir875 microRNA 875 involved_in ISO (MGI:6405074|PMID:32188878) RGD PMID:32188878 MGI:6405074 NCBI chr 7:66,861,955...66,862,027
Ensembl chr 7:66,861,955...66,862,027
JBrowse link
G Msx1 msh homeobox 1 involved_in
acts_upstream_of_or_within
ISO (MGI:4418636|PMID:11023873)
MGI:97493 (MGI:4453942|PMID:20123092)
RGD PMID:11023873 PMID:20123092 MGI:4418636 MGI:4453942 NCBI chr14:72,961,170...72,964,970
Ensembl chr14:72,961,148...72,964,966
JBrowse link
G Msx2 msh homeobox 2 acts_upstream_of_or_within ISO MGI:1926381 (MGI:1355063|PMID:10742104) RGD PMID:10742104 MGI:1355063 NCBI chr17:11,097,214...11,102,879
Ensembl chr17:11,097,103...11,102,879
JBrowse link
G Myo5a myosin VA acts_upstream_of_or_within ISO (MGI:3028456|PMID:14730011) RGD PMID:14730011 MGI:3028456 NCBI chr 8:75,811,985...75,980,049
Ensembl chr 8:75,812,412...75,975,918
JBrowse link
G Nrg1 neuregulin 1 IEP RGD PMID:12112465 RGD:727391 NCBI chr16:59,250,658...60,303,024
Ensembl chr16:59,250,854...60,296,884
JBrowse link
G Odam odontogenic, ameloblast associated involved_in IEP PMID:25911094 UniProt PMID:25911094 RGD:10400875 NCBI chr14:20,193,286...20,202,517
Ensembl chr14:20,193,302...20,202,517
JBrowse link
G Osr1 odd-skipped related transcription factor 1 involved_in ISS
ISO
GO_REF:0000024
UniProtKB:Q91ZD1 (MGI:3848564|PMID:19389375)
UniProt
RGD
PMID:19389375 GO_REF:0000024 MGI:3848564 NCBI chr 6:32,369,561...32,380,822
Ensembl chr 6:32,373,816...32,380,817
JBrowse link
G Osr2 odd-skipped related transciption factor 2 involved_in ISS
ISO
GO_REF:0000024
(MGI:3848564|PMID:19389375)
UniProt
RGD
PMID:19389375 GO_REF:0000024 MGI:3848564 NCBI chr 7:66,487,841...66,495,003
Ensembl chr 7:66,487,839...66,495,224
JBrowse link
G Pam peptidylglycine alpha-amidating monooxygenase IEP RGD PMID:9441675 RGD:2302426 NCBI chr 9:97,998,581...98,271,966
Ensembl chr 9:98,122,916...98,271,965
JBrowse link
G Pax9 paired box 9 acts_upstream_of_or_within ISO MGI:97168 (MGI:4453942|PMID:20123092) RGD PMID:20123092 MGI:4453942 NCBI chr 6:74,186,749...74,203,508
Ensembl chr 6:74,182,568...74,203,506
JBrowse link
G Pcdha13 protocadherin alpha 13 NAS RGD PMID:12508039 RGD:633554 Ensembl chr18:28,581,225...28,846,211 JBrowse link
G Pcdha4 protocadherin alpha 4 NAS RGD PMID:12508039 RGD:633554 NCBI chr18:28,581,040...28,846,214
Ensembl chr18:28,581,225...28,846,211
JBrowse link
G Phex phosphate regulating endopeptidase homolog, X-linked acts_upstream_of_or_within ISO MGI:1857312 (MGI:5469811|PMID:23174213) RGD PMID:23174213 MGI:5469811 NCBI chr  X:37,607,553...37,856,183
Ensembl chr  X:37,610,760...37,854,469
JBrowse link
G Pitx2 paired-like homeodomain 2 involved_in
acts_upstream_of_or_within
ISO (PMID:14630904)
MGI:1857844|MGI:1857846|MGI:2384494 (MGI:1344731|PMID:10498698), (MGI:1345532|PMID:10499586)
RGD PMID:10498698 PMID:10499586 PMID:14630904 MGI:1344731 MGI:1345532 NCBI chr 2:217,717,738...217,737,293
Ensembl chr 2:217,717,693...217,737,293
JBrowse link
G Rhoa ras homolog family member A acts_upstream_of_or_within ISO (PMID:25911094) RGD PMID:25911094 NCBI chr 8:108,991,926...109,025,746
Ensembl chr 8:108,991,954...109,025,746
JBrowse link
G Sdc1 syndecan 1 IEP RGD PMID:11696987 RGD:1643139 NCBI chr 6:31,562,799...31,585,267
Ensembl chr 6:31,562,739...31,585,264
JBrowse link
G Shh sonic hedgehog signaling molecule acts_upstream_of_or_within ISO (MGI:1855801|PMID:10781055) RGD PMID:10781055 MGI:1855801 NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170
JBrowse link
G Slc3a2 solute carrier family 3 member 2 IEP RGD PMID:15027953 RGD:151361134 NCBI chr 1:205,604,468...205,618,931
Ensembl chr 1:205,604,468...205,618,931
JBrowse link
G Slc7a5 solute carrier family 7 member 5 IEP RGD PMID:15027953 RGD:151361134 NCBI chr19:49,935,220...49,963,823
Ensembl chr19:49,935,220...49,963,823
JBrowse link
G Src SRC proto-oncogene, non-receptor tyrosine kinase acts_upstream_of_or_within ISO MGI:1857247 (MGI:5469811|PMID:23174213) RGD PMID:23174213 MGI:5469811 NCBI chr 3:146,091,969...146,139,492
Ensembl chr 3:146,091,841...146,139,476
JBrowse link
G Ssuh2 ssu-2 homolog involved_in ISO (PMID:27680507)
(MGI:5887163|PMID:27680507)
RGD PMID:27680507 MGI:5887163 NCBI chr 4:145,502,942...145,521,881
Ensembl chr 4:145,503,185...145,521,735
JBrowse link
G Tcirg1 T-cell immune regulator 1, ATPase H+ transporting V0 subunit A3 acts_upstream_of_or_within ISO MGI:1856973 (MGI:5318178|PMID:22245629) RGD PMID:22245629 MGI:5318178 NCBI chr 1:201,127,034...201,138,787
Ensembl chr 1:201,127,034...201,138,742
JBrowse link
G Twist1 twist family bHLH transcription factor 1 IEP RGD PMID:11330859 RGD:5131603 NCBI chr 6:50,674,910...50,676,904
Ensembl chr 6:50,674,678...50,677,653
JBrowse link
G Wnt10a Wnt family member 10A involved_in ISO (PMID:17847007), (PMID:19559398) RGD PMID:17847007 PMID:19559398 NCBI chr 9:76,349,931...76,362,400
Ensembl chr 9:76,349,931...76,362,400
JBrowse link
G Zfp422 zinc finger protein 422 involved_in NAS PMID:14706453 UniProt PMID:14706453 RGD:1304281 NCBI chr 4:149,885,805...149,893,287
Ensembl chr 4:149,885,600...149,893,257
JBrowse link
amelogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Amelx amelogenin, X-linked involved_in ISO (MGI:6716964|PMID:26403673) RGD PMID:26403673 MGI:6716964 NCBI chr  X:25,076,362...25,087,660
Ensembl chr  X:25,076,362...25,087,660
JBrowse link
G Atf2 activating transcription factor 2 IDA RGD PMID:15218628 RGD:10053659 NCBI chr 3:58,718,323...58,795,280
Ensembl chr 3:58,718,332...58,795,236
JBrowse link
G Cftr CF transmembrane conductance regulator involved_in IEA
ISO
GO_REF:0000107
(MGI:6716964|PMID:26403673)
Ensembl
RGD
PMID:26403673 GO_REF:0000107 MGI:6716964 NCBI chr 4:46,561,269...46,728,759
Ensembl chr 4:46,560,885...46,728,756
JBrowse link
G Csf3r colony stimulating factor 3 receptor IEP RGD PMID:10206335 RGD:5134351 NCBI chr 5:138,298,605...138,318,224
Ensembl chr 5:138,301,506...138,317,881
JBrowse link
G Dspp dentin sialophosphoprotein acts_upstream_of_or_within ISO MGI:2653208 (MGI:5912858|PMID:25027178) RGD PMID:25027178 MGI:5912858 NCBI chr14:5,565,562...5,571,669
Ensembl chr14:5,565,629...5,571,672
JBrowse link
G Enam enamelin acts_upstream_of_or_within
involved_in
ISO
IBA
MGI:3055582|MGI:3055586|MGI:3055587|MGI:3796583 (MGI:3530197|PMID:15649948), (MGI:3796449|PMID:18252720), (MGI:5634640|PMID:22813216), (MGI:5647983|PMID:24603688)
PMID:21873635
RGD PMID:15649948 PMID:18252720 PMID:22813216 PMID:24603688 PMID:21873635 MGI:3530197 MGI:3796449 MGI:5634640 MGI:5647983, RGD:13792537 NCBI chr14:19,556,729...19,581,433
Ensembl chr14:19,556,729...19,581,425
JBrowse link
G Klk4 kallikrein-related peptidase 4 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:4355346 (MGI:4354666|PMID:19578120), (MGI:5008529|PMID:21454549), (MGI:5502300|PMID:22243248)
(PMID:15235027)
RGD PMID:15235027 PMID:19578120 PMID:21454549 PMID:22243248 PMID:21873635 MGI:4354666 MGI:5008529 MGI:5502300, RGD:13792537 NCBI chr 1:94,344,608...94,348,979
Ensembl chr 1:94,344,195...94,349,424
JBrowse link
G Klk5 kallikrein related-peptidase 5 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:94,296,574...94,304,768
Ensembl chr 1:94,296,168...94,304,666
JBrowse link
G Mmp20 matrix metallopeptidase 20 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:2447874 (MGI:3522683|PMID:15557396), (MGI:5008529|PMID:21454549), (MGI:5502300|PMID:22243248)
RGD PMID:15557396 PMID:21454549 PMID:22243248 PMID:21873635 MGI:3522683 MGI:5008529 MGI:5502300, RGD:13792537 NCBI chr 8:4,789,415...4,830,035
Ensembl chr 8:4,789,415...4,830,035
JBrowse link
G Perp p53 apoptosis effector related to PMP22 acts_upstream_of_or_within ISO MGI:2683069 (MGI:5317035|PMID:21285247) RGD PMID:21285247 MGI:5317035 NCBI chr 1:13,542,067...13,554,514
Ensembl chr 1:13,542,067...13,554,511
JBrowse link
G Relt RELT, TNF receptor involved_in ISO
IBA
(PMID:30506946)
(MGI:6368096|PMID:30506946)
PMID:21873635
RGD PMID:30506946 PMID:21873635 MGI:6368096, RGD:13792537 NCBI chr 1:155,206,976...155,224,609
Ensembl chr 1:155,206,976...155,214,196
JBrowse link
G Slc24a4 solute carrier family 24 member 4 involved_in ISO (MGI:5520028|PMID:23375655), (MGI:6716966|PMID:27752731) RGD PMID:23375655 PMID:27752731 MGI:5520028 MGI:6716966 NCBI chr 6:121,278,746...121,419,811
Ensembl chr 6:121,280,031...121,414,949
JBrowse link
G Slc4a2 solute carrier family 4 member 2 involved_in ISO (MGI:6716964|PMID:26403673) RGD PMID:26403673 MGI:6716964 NCBI chr 4:10,736,419...10,754,407
Ensembl chr 4:10,736,425...10,752,965
JBrowse link
cementum mineralization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alpl alkaline phosphatase, biomineralization associated IEP RGD PMID:17043865 RGD:2316162 NCBI chr 5:149,951,397...150,006,424
Ensembl chr 5:149,951,409...150,006,446
JBrowse link
G Ankh ANKH inorganic pyrophosphate transport regulator involved_in ISO MGI:3608932|MGI:3785162 (MGI:6323803|PMID:31059863) RGD PMID:31059863 MGI:6323803 NCBI chr 2:78,153,027...78,280,181
Ensembl chr 2:78,153,026...78,280,187
JBrowse link
G Enpp1 ectonucleotide pyrophosphatase/phosphodiesterase 1 involved_in ISO MGI:1915401|MGI:2153568|MGI:3608932|MGI:3785162 (MGI:6323803|PMID:31059863) RGD PMID:31059863 MGI:6323803 NCBI chr 1:20,698,746...20,763,741
Ensembl chr 1:20,698,764...20,763,715
JBrowse link
G Fgfr1 Fibroblast growth factor receptor 1 involved_in ISO MGI:3608932|MGI:3785162 (MGI:6323803|PMID:31059863) RGD PMID:31059863 MGI:6323803 NCBI chr16:66,492,445...66,546,731
Ensembl chr16:66,494,042...66,547,350
JBrowse link
G Hacd1 3-hydroxyacyl-CoA dehydratase 1 involved_in ISO (PMID:25263524) RGD PMID:25263524 NCBI chr17:77,081,508...77,106,114
Ensembl chr17:77,083,740...77,106,073
JBrowse link
G Sp7 Sp7 transcription factor involved_in ISO MGI:1915401|MGI:3608932|MGI:3785162|MGI:97370 (MGI:6323803|PMID:31059863) RGD PMID:31059863 MGI:6323803 NCBI chr 7:133,484,609...133,494,788
Ensembl chr 7:133,484,609...133,494,847
JBrowse link
G Wls Wnt ligand secretion mediator involved_in ISO MGI:2153568|MGI:97370 (MGI:6323803|PMID:31059863) RGD PMID:31059863 MGI:6323803 NCBI chr 2:248,931,885...249,047,248
Ensembl chr 2:248,931,903...249,048,298
JBrowse link
dentin mineralization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tcirg1 T-cell immune regulator 1, ATPase H+ transporting V0 subunit A3 acts_upstream_of_or_within ISO MGI:1856973 (MGI:5469811|PMID:23174213) RGD PMID:23174213 MGI:5469811 NCBI chr 1:201,127,034...201,138,787
Ensembl chr 1:201,127,034...201,138,742
JBrowse link
dentinogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dspp dentin sialophosphoprotein acts_upstream_of_or_within
involved_in
IEP
ISO
IBA
MGI:2653208 (MGI:5912858|PMID:25027178)
PMID:21873635
RGD PMID:25027178 PMID:24502800 PMID:21873635 MGI:5912858, RGD:12911210, RGD:13792537 NCBI chr14:5,565,562...5,571,669
Ensembl chr14:5,565,629...5,571,672
JBrowse link
G Fam20c FAM20C, golgi associated secretory pathway kinase acts_upstream_of_or_within ISO MGI:5432377 (MGI:5432245|PMID:22732358) RGD PMID:22732358 MGI:5432245 NCBI chr12:15,826,864...15,885,423
Ensembl chr12:15,826,871...15,884,543
JBrowse link
G Htra1 HtrA serine peptidase 1 IEP RGD PMID:22595117 RGD:7394756 NCBI chr 1:185,497,815...185,547,380
Ensembl chr 1:185,497,735...185,547,379
JBrowse link
G Serpine1 serpin family E member 1 involved_in IEA
ISO
GO_REF:0000107
(PMID:27046084)
Ensembl
RGD
PMID:27046084 GO_REF:0000107 NCBI chr12:19,601,272...19,611,657
Ensembl chr12:19,601,272...19,611,657
JBrowse link
G Slc34a1 solute carrier family 34 member 1 IEP RGD PMID:12369784 RGD:7243151 NCBI chr17:9,218,876...9,233,852
Ensembl chr17:9,218,876...9,233,852
JBrowse link
G Smpd3 sphingomyelin phosphodiesterase 3 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1856877 (MGI:3587156|PMID:16025116)
Ensembl
RGD
PMID:16025116 GO_REF:0000107 MGI:3587156 NCBI chr19:34,162,337...34,245,786
Ensembl chr19:34,162,341...34,245,749
JBrowse link
enamel mineralization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Amelx amelogenin, X-linked involved_in ISO
IBA
(PMID:1916828)
PMID:21873635
(MGI:6716964|PMID:26403673)
(PMID:21653221)
RGD PMID:1916828 PMID:21653221 PMID:26403673 PMID:21873635 MGI:6716964, RGD:13792537 NCBI chr  X:25,076,362...25,087,660
Ensembl chr  X:25,076,362...25,087,660
JBrowse link
G Cftr CF transmembrane conductance regulator IMP RGD PMID:31942562 RGD:126928119 NCBI chr 4:46,561,269...46,728,759
Ensembl chr 4:46,560,885...46,728,756
JBrowse link
G Cnnm4 cyclin and CBS domain divalent metal cation transport mediator 4 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5559016|PMID:24339795)
GO_REF:0000107
RGD
Ensembl
PMID:24339795 GO_REF:0000107 MGI:5559016 NCBI chr 9:38,711,726...38,750,942
Ensembl chr 9:38,711,710...38,750,942
JBrowse link
G Fam20a FAM20A, golgi associated secretory pathway pseudokinase involved_in
acts_upstream_of_or_within
ISO
IBA
(PMID:21549343), (PMID:21990045), (PMID:23468644)
PMID:21873635
MGI:5432376 (MGI:5432245|PMID:22732358)
RGD PMID:21549343 PMID:21990045 PMID:22732358 PMID:23468644 PMID:21873635 MGI:5432245, RGD:13792537 NCBI chr10:94,638,836...94,697,814
Ensembl chr10:94,642,850...94,697,672
JBrowse link
G Fam20c FAM20C, golgi associated secretory pathway kinase involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:5432377 (MGI:5432245|PMID:22732358)
RGD PMID:22732358 PMID:21873635 MGI:5432245, RGD:13792537 NCBI chr12:15,826,864...15,885,423
Ensembl chr12:15,826,871...15,884,543
JBrowse link
G Foxo1 forkhead box O1 IEP RGD PMID:25183529 RGD:10044263 NCBI chr 2:136,312,168...136,390,603
Ensembl chr 2:136,312,168...136,387,790
JBrowse link
G Itgb6 integrin subunit beta 6 acts_upstream_of_or_within ISO MGI:1926484 (MGI:5507902|PMID:23264742) RGD PMID:23264742 MGI:5507902 NCBI chr 3:45,046,295...45,170,532
Ensembl chr 3:45,048,044...45,121,671
JBrowse link
G Msx2 msh homeobox 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1926381 (MGI:1355063|PMID:10742104)
Ensembl
RGD
PMID:10742104 GO_REF:0000107 MGI:1355063 NCBI chr17:11,097,214...11,102,879
Ensembl chr17:11,097,103...11,102,879
JBrowse link
G Nectin1 nectin cell adhesion molecule 1 acts_upstream_of_or_within ISO MGI:3814719 (MGI:3814115|PMID:18703497) RGD PMID:18703497 MGI:3814115 NCBI chr 8:44,101,776...44,164,863
Ensembl chr 8:44,101,776...44,189,787
JBrowse link
G Ppara peroxisome proliferator activated receptor alpha acts_upstream_of_or_within ISO MGI:1857774 (MGI:3843118|PMID:19320717) RGD PMID:19320717 MGI:3843118 NCBI chr 7:116,832,405...116,900,878
Ensembl chr 7:116,832,756...116,895,346
JBrowse link
G Stim1 stromal interaction molecule 1 involved_in ISS
ISO
GO_REF:0000024
(PMID:24621671)
UniProt
RGD
PMID:24621671 GO_REF:0000024 NCBI chr 1:156,656,246...156,818,777
Ensembl chr 1:156,656,013...156,818,363
JBrowse link
G Tbx1 T-box transcription factor 1 involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
MGI:2179136 (MGI:3848106|PMID:19233155)
UniProt
RGD
PMID:19233155 GO_REF:0000024 MGI:3848106 NCBI chr11:82,409,275...82,419,058
Ensembl chr11:82,409,275...82,418,380
JBrowse link
G Tcirg1 T-cell immune regulator 1, ATPase H+ transporting V0 subunit A3 acts_upstream_of_or_within ISO MGI:1856973 (MGI:5469811|PMID:23174213) RGD PMID:23174213 MGI:5469811 NCBI chr 1:201,127,034...201,138,787
Ensembl chr 1:201,127,034...201,138,742
JBrowse link
G Tgfb1 transforming growth factor, beta 1 acts_upstream_of_or_within ISO (MGI:6443509|PMID:31336344) RGD PMID:31336344 MGI:6443509 NCBI chr 1:81,196,532...81,212,848
Ensembl chr 1:81,196,532...81,212,847
JBrowse link
G Wdr72 WD repeat domain 72 acts_upstream_of_or_within ISO MGI:4363147|MGI:5913851 (MGI:5605934|PMID:25008349), (MGI:5906533|PMID:26247047) RGD PMID:25008349 PMID:26247047 MGI:5605934 MGI:5906533 NCBI chr 8:74,838,338...75,020,938
Ensembl chr 8:74,838,318...75,018,229
JBrowse link
negative regulation of odontogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apc APC regulator of WNT signaling pathway acts_upstream_of_or_within ISO MGI:3688435 (MGI:3688426|PMID:17002498) RGD PMID:17002498 MGI:3688426 NCBI chr18:25,828,558...25,925,511
Ensembl chr18:25,864,222...25,922,696
JBrowse link
negative regulation of odontogenesis of dentin-containing tooth term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rspo2 R-spondin 2 acts_upstream_of_or_within ISO MGI:3839444 (MGI:5573000|PMID:24616052) RGD PMID:24616052 MGI:5573000 NCBI chr 7:74,096,378...74,239,398
Ensembl chr 7:74,103,090...74,238,933
JBrowse link
G Tnfrsf11b TNF receptor superfamily member 11B acts_upstream_of_or_within IEP
ISO
(MGI:3032913|PMID:14981127) RGD PMID:14981127 PMID:16283633 MGI:3032913, RGD:1624174 NCBI chr 7:85,566,520...85,594,526
Ensembl chr 7:85,566,520...85,594,538
JBrowse link
negative regulation of tooth mineralization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aspn asporin involved_in ISO (MGI:3722035|PMID:17522060) RGD PMID:17522060 MGI:3722035 NCBI chr17:15,079,910...15,104,369
Ensembl chr17:15,080,639...15,104,041
JBrowse link
G Bcor BCL6 co-repressor involved_in ISO (PMID:19578371) RGD PMID:19578371 NCBI chr  X:10,609,756...10,729,613
Ensembl chr  X:10,687,732...10,729,613
JBrowse link
odontogenesis of dentin-containing tooth term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acvr2a activin A receptor type 2A acts_upstream_of_or_within
involved_in
ISO
IEA
MGI:87912 (MGI:3611711|PMID:16330774)
GO_REF:0000107
RGD
Ensembl
PMID:16330774 GO_REF:0000107 MGI:3611711 NCBI chr 3:33,204,961...33,292,673
Ensembl chr 3:33,205,523...33,289,968
JBrowse link
G Acvr2b activin A receptor type 2B acts_upstream_of_or_within ISO MGI:102806|MGI:1857709|MGI:2179547 (MGI:2155628|PMID:11714685), (MGI:3611711|PMID:16330774) RGD PMID:11714685 PMID:16330774 MGI:2155628 MGI:3611711 NCBI chr 8:119,138,901...119,178,477
Ensembl chr 8:119,138,812...119,170,458
JBrowse link
G Adm adrenomedullin IEP RGD PMID:19828015 RGD:2325629 NCBI chr 1:164,745,484...164,747,655
Ensembl chr 1:164,745,466...164,747,654
JBrowse link
G Ambn ameloblastin involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr14:19,601,761...19,614,382
Ensembl chr14:19,601,702...19,614,393
JBrowse link
G Amelx amelogenin, X-linked acts_upstream_of_or_within ISO (PMID:16674683) RGD PMID:16674683 NCBI chr  X:25,076,362...25,087,660
Ensembl chr  X:25,076,362...25,087,660
JBrowse link
G Amtn amelotin involved_in
acts_upstream_of_or_within
IEP
ISO
IBA
PMID:16787391
(PMID:16304441)
PMID:21873635
PMID:16674676
RGD PMID:16304441 PMID:16787391 PMID:21873635 PMID:16674676 RGD:2304068, RGD:13792537, RGD:8554564 NCBI chr14:19,648,624...19,661,181
Ensembl chr14:19,648,625...19,661,181
JBrowse link
G Ankrd11 ankyrin repeat domain containing 11 acts_upstream_of_or_within ISO (PMID:21782149) RGD PMID:21782149 NCBI chr19:50,940,284...51,098,962
Ensembl chr19:50,940,299...51,098,962
JBrowse link
G Bax BCL2 associated X, apoptosis regulator acts_upstream_of_or_within ISO MGI:1197519 (MGI:3581932|PMID:15967824) RGD PMID:15967824 MGI:3581932 NCBI chr 1:95,940,001...95,945,407
Ensembl chr 1:95,938,808...95,945,368
JBrowse link
G Bcl11b BAF chromatin remodeling complex subunit BCL11B acts_upstream_of_or_within ISO MGI:3839578 (MGI:3838423|PMID:19251658) RGD PMID:19251658 MGI:3838423 NCBI chr 6:126,834,531...126,927,720
Ensembl chr 6:126,834,531...126,928,224
JBrowse link
G Bcl2l11 Bcl2-like 11 acts_upstream_of_or_within ISO MGI:99702 (MGI:3581932|PMID:15967824) RGD PMID:15967824 MGI:3581932 NCBI chr 3:115,366,783...115,404,068
Ensembl chr 3:115,366,646...115,404,068
JBrowse link
G Bmp2 bone morphogenetic protein 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:3513220|PMID:15525533)
Ensembl
RGD
PMID:15525533 GO_REF:0000107 MGI:3513220 NCBI chr 3:120,812,660...120,822,579
Ensembl chr 3:120,812,882...120,821,397
JBrowse link
G Bmp4 bone morphogenetic protein 4 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1913292 (MGI:3513220|PMID:15525533), (MGI:3603904|PMID:16179481)
Ensembl
RGD
PMID:15525533 PMID:16179481 GO_REF:0000107 MGI:3513220 MGI:3603904 NCBI chr15:19,618,538...19,633,494
Ensembl chr15:19,618,542...19,623,306
JBrowse link
G Bmp7 bone morphogenetic protein 7 acts_upstream_of_or_within ISO (MGI:3513220|PMID:15525533) RGD PMID:15525533 MGI:3513220 NCBI chr 3:161,639,915...161,716,938
Ensembl chr 3:161,516,462...161,716,788
JBrowse link
G Bmpr1a bone morphogenetic protein receptor type 1A acts_upstream_of_or_within ISO MGI:2158390|MGI:2176835 (MGI:3574741|PMID:15716346) RGD PMID:15716346 MGI:3574741 NCBI chr16:9,736,390...9,829,825
Ensembl chr16:9,736,630...9,780,616
JBrowse link
G Bsg basigin (Ok blood group) IEP RGD PMID:17684756 RGD:2289060 NCBI chr 7:9,993,170...10,000,387
Ensembl chr 7:9,993,170...10,000,387
JBrowse link
G Car2 carbonic anhydrase 2 IEP RGD PMID:8766158 RGD:1600721 NCBI chr 2:86,741,625...86,756,766
Ensembl chr 2:86,741,626...86,756,818
JBrowse link
G Ccdc154 coiled-coil domain containing 154 acts_upstream_of_or_within ISO MGI:5702426 (MGI:5697796|PMID:20121924) RGD PMID:20121924 MGI:5697796 NCBI chr10:14,177,271...14,187,378
Ensembl chr10:14,177,278...14,187,253
JBrowse link
G Chuk component of inhibitor of nuclear factor kappa B kinase complex acts_upstream_of_or_within ISO MGI:3039784 (MGI:3042351|PMID:14960276) RGD PMID:14960276 MGI:3042351 NCBI chr 1:242,959,539...242,995,066
Ensembl chr 1:242,959,760...242,995,065
JBrowse link
G Ctnna1 catenin alpha 1 IEP RGD PMID:10681393 RGD:2289810 NCBI chr18:26,728,246...26,860,911
Ensembl chr18:26,728,485...26,860,910
JBrowse link
G Ctnnb1 catenin beta 1 acts_upstream_of_or_within IEP
ISO
MGI:1858008 (MGI:3578468|PMID:15866165) RGD PMID:15866165 PMID:10681393 MGI:3578468, RGD:2289810 NCBI chr 8:120,640,008...120,667,110
Ensembl chr 8:120,639,995...120,667,111
JBrowse link
G Dlx1 distal-less homeobox 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:94902 (MGI:87771|PMID:9187081)
Ensembl
RGD
PMID:9187081 GO_REF:0000107 MGI:87771 NCBI chr 3:56,356,190...56,360,780
Ensembl chr 3:56,356,190...56,360,780
JBrowse link
G Dlx2 distal-less homeobox 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:94901 (MGI:87771|PMID:9187081)
Ensembl
RGD
PMID:9187081 GO_REF:0000107 MGI:87771 NCBI chr 3:56,371,347...56,373,230
Ensembl chr 3:56,370,483...56,373,597
JBrowse link
G Dlx3 distal-less homeobox 3 acts_upstream_of_or_within ISO MGI:2386570|MGI:3813133 (MGI:5320683|PMID:22351765) RGD PMID:22351765 MGI:5320683 NCBI chr10:80,064,489...80,069,891
Ensembl chr10:80,064,489...80,069,872
JBrowse link
G Dspp dentin sialophosphoprotein IEP RGD PMID:15533758 RGD:1599800 NCBI chr14:5,565,562...5,571,669
Ensembl chr14:5,565,629...5,571,672
JBrowse link
G Eda ectodysplasin-A involved_in
acts_upstream_of_or_within
ISO (PMID:27144394)
MGI:1856197 (MGI:3612936|PMID:10610025), (MGI:61212|PMID:5893447)
RGD PMID:5893447 PMID:10610025 PMID:27144394 MGI:3612936 MGI:61212 NCBI chr  X:65,078,454...65,480,172
Ensembl chr  X:65,078,673...65,480,172
JBrowse link
G Edar ectodysplasin-A receptor acts_upstream_of_or_within ISO MGI:1856017 (MGI:54784|PMID:544312) RGD PMID:544312 MGI:54784 NCBI chr20:26,587,836...26,666,543
Ensembl chr20:26,587,839...26,666,494
JBrowse link
G Edaradd EDAR-associated death domain acts_upstream_of_or_within ISO MGI:1856832 (MGI:2684502|PMID:14699584), (MGI:61212|PMID:5893447) RGD PMID:5893447 PMID:14699584 MGI:2684502 MGI:61212 NCBI chr17:85,866,629...85,910,612
Ensembl chr17:85,656,905...85,910,447
JBrowse link
G Enam enamelin acts_upstream_of_or_within ISO MGI:3512772 (MGI:3051784|PMID:15271968) RGD PMID:15271968 MGI:3051784 NCBI chr14:19,556,729...19,581,433
Ensembl chr14:19,556,729...19,581,425
JBrowse link
G Fgf10 fibroblast growth factor 10 acts_upstream_of_or_within ISO MGI:1859647 (MGI:2159281|PMID:11880361), (MGI:3688470|PMID:11062007) RGD PMID:11062007 PMID:11880361 MGI:2159281 MGI:3688470 NCBI chr 2:50,801,897...50,875,428
Ensembl chr 2:50,800,992...50,876,866
JBrowse link
G Fgf4 fibroblast growth factor 4 acts_upstream_of_or_within ISO (MGI:2447924|PMID:12502739) RGD PMID:12502739 MGI:2447924 NCBI chr 1:200,023,937...200,027,793
Ensembl chr 1:200,024,056...200,025,466
JBrowse link
G Foxc1 forkhead box C1 involved_in ISO (PMID:12614756) RGD PMID:12614756 NCBI chr17:32,631,379...32,635,361
Ensembl chr17:32,633,142...32,634,803
JBrowse link
G Fst follistatin acts_upstream_of_or_within ISO MGI:1857467 (MGI:3050251|PMID:15305290), (MGI:3513220|PMID:15525533) RGD PMID:15305290 PMID:15525533 MGI:3050251 MGI:3513220 NCBI chr 2:46,123,260...46,130,584
Ensembl chr 2:46,123,439...46,130,571
JBrowse link
G Gata6 GATA binding protein 6 IEP RGD PMID:17923110 RGD:2314196 NCBI chr18:2,188,121...2,219,532
Ensembl chr18:2,188,121...2,219,532
JBrowse link
G Gli2 GLI family zinc finger 2 acts_upstream_of_or_within ISO MGI:1857509|MGI:95729 (MGI:1277041|PMID:9655803) RGD PMID:9655803 MGI:1277041 NCBI chr13:29,946,809...30,163,901
Ensembl chr13:29,946,809...30,163,574
JBrowse link
G Gli3 GLI family zinc finger 3 acts_upstream_of_or_within ISO MGI:95728 (MGI:1277041|PMID:9655803) RGD PMID:9655803 MGI:1277041 NCBI chr17:49,438,567...49,709,712
Ensembl chr17:49,438,567...49,709,712
JBrowse link
G Gnao1 G protein subunit alpha o1 IEP RGD PMID:28706494 RGD:13513970 NCBI chr19:11,034,874...11,192,502
Ensembl chr19:11,035,956...11,192,493
JBrowse link
G Hand1 heart and neural crest derivatives expressed 1 acts_upstream_of_or_within ISO MGI:103580 (MGI:3765375|PMID:17764670) RGD PMID:17764670 MGI:3765375 NCBI chr10:42,006,646...42,009,213
Ensembl chr10:42,006,651...42,009,213
JBrowse link
G Hand2 heart and neural crest derivatives expressed 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:103577 (MGI:3765375|PMID:17764670)
Ensembl
RGD
PMID:17764670 GO_REF:0000107 MGI:3765375 NCBI chr16:32,917,826...32,919,880
Ensembl chr16:32,917,823...32,919,891
JBrowse link
G Hdac1 histone deacetylase 1 involved_in ISO UniProtKB:P70288 (MGI:4889029|PMID:21093383) RGD PMID:21093383 MGI:4889029 NCBI chr 5:141,853,992...141,881,057
Ensembl chr 5:141,853,989...141,881,111
JBrowse link
G Hdac2 histone deacetylase 2 involved_in ISO UniProtKB:O09106 (MGI:4889029|PMID:21093383) RGD PMID:21093383 MGI:4889029 NCBI chr20:40,548,250...40,571,609
Ensembl chr20:40,548,250...40,571,609
JBrowse link
G Itga6 integrin subunit alpha 6 acts_upstream_of_or_within ISO (MGI:3623696|PMID:16365040) RGD PMID:16365040 MGI:3623696 NCBI chr 3:56,604,512...56,689,428
Ensembl chr 3:56,617,268...56,689,428
JBrowse link
G Jag2 jagged canonical Notch ligand 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2657215 (MGI:3578593|PMID:15721140)
Ensembl
RGD
PMID:15721140 GO_REF:0000107 MGI:3578593 NCBI chr 6:131,983,056...132,005,359
Ensembl chr 6:131,983,056...132,005,818
JBrowse link
G Lama5 laminin subunit alpha 5 acts_upstream_of_or_within ISO MGI:1934917 (MGI:3623696|PMID:16365040) RGD PMID:16365040 MGI:3623696 NCBI chr 3:167,270,296...167,318,370
Ensembl chr 3:167,270,296...167,318,451
JBrowse link
G Lef1 lymphoid enhancer binding factor 1 acts_upstream_of_or_within ISO MGI:1202879|MGI:1926601 (MGI:2447924|PMID:12502739), (MGI:3530724|PMID:15649466), (MGI:3722225|PMID:17699607) RGD PMID:12502739 PMID:15649466 PMID:17699607 MGI:2447924 MGI:3530724 MGI:3722225 NCBI chr 2:219,666,549...219,779,815
Ensembl chr 2:219,666,592...219,779,794
JBrowse link
G Lhx8 LIM homeobox 8 acts_upstream_of_or_within ISO (MGI:2662278|PMID:12703558) RGD PMID:12703558 MGI:2662278 NCBI chr 2:243,244,958...243,269,631
Ensembl chr 2:243,244,961...243,269,416
JBrowse link
G Lrp4 LDL receptor related protein 4 acts_upstream_of_or_within ISO MGI:2661383|MGI:3580702 (MGI:3703100|PMID:17119023) RGD PMID:17119023 MGI:3703100 NCBI chr 3:77,429,600...77,483,593
Ensembl chr 3:77,429,798...77,483,593
JBrowse link
G Lrp6 LDL receptor related protein 6 acts_upstream_of_or_within ISO MGI:1861309 (MGI:54382|PMID:591875), (MGI:61212|PMID:5893447) RGD PMID:591875 PMID:5893447 MGI:54382 MGI:61211 MGI:61212 MGI:61254 NCBI chr 4:167,266,581...167,400,155
Ensembl chr 4:167,270,353...167,400,497
JBrowse link
G Msx1 msh homeobox 1 involved_in ISO (PMID:10742093), (PMID:11369996), (PMID:8696335)
(MGI:3688967|PMID:11369996)
RGD PMID:8696335 PMID:10742093 PMID:11369996 MGI:3688967 NCBI chr14:72,961,170...72,964,970
Ensembl chr14:72,961,148...72,964,966
JBrowse link
G Nf2 NF2, moesin-ezrin-radixin like (MERLIN) tumor suppressor acts_upstream_of_or_within ISO MGI:1926957 (MGI:1860693|PMID:10887156) RGD PMID:10887156 MGI:1860693 NCBI chr14:79,627,399...79,710,709
Ensembl chr14:79,627,399...79,710,667
JBrowse link
G Nfic nuclear factor I/C acts_upstream_of_or_within ISO MGI:2450153 (MGI:2449754|PMID:12529411) RGD PMID:12529411 MGI:2449754 NCBI chr 7:8,278,210...8,309,936
Ensembl chr 7:8,253,361...8,309,936
JBrowse link
G Ngfr nerve growth factor receptor acts_upstream_of
involved_in
ISO
IEA
MGI:1857226 (MGI:895167|PMID:9268129)
GO_REF:0000107
RGD
Ensembl
PMID:9268129 GO_REF:0000107 MGI:895167 NCBI chr10:80,515,287...80,533,518
Ensembl chr10:80,515,299...80,533,518
JBrowse link
G Nkx2-3 NK2 homeobox 3 acts_upstream_of_or_within ISO MGI:2448069 (MGI:2446989|PMID:12141427) RGD PMID:12141427 MGI:2446989 NCBI chr 1:242,478,130...242,481,083
Ensembl chr 1:242,478,130...242,481,083
JBrowse link
G Odam odontogenic, ameloblast associated involved_in ISO
IEA
IBA
(PMID:16674676)
GO_REF:0000107
PMID:21873635
RGD
Ensembl
PMID:16674676 PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr14:20,193,286...20,202,517
Ensembl chr14:20,193,302...20,202,517
JBrowse link
G Pdgfra platelet derived growth factor receptor alpha involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1926728 (MGI:3525374|PMID:15543606)
Ensembl
RGD
PMID:15543606 GO_REF:0000107 MGI:3525374 NCBI chr14:33,005,838...33,054,347
Ensembl chr14:33,005,839...33,054,335
JBrowse link
G Pitx2 paired-like homeodomain 2 IEP RGD PMID:16416307 RGD:2289007 NCBI chr 2:217,717,738...217,737,293
Ensembl chr 2:217,717,693...217,737,293
JBrowse link
G Rogdi rogdi atypical leucine zipper involved_in ISO (PMID:25565929) RGD PMID:25565929 NCBI chr10:10,567,834...10,572,453
Ensembl chr10:10,567,834...10,572,452
JBrowse link
G Runx2 RUNX family transcription factor 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2176465 (MGI:3051915|PMID:15136142), (MGI:3656469|PMID:15668330)
Ensembl
RGD
PMID:15136142 PMID:15668330 GO_REF:0000107 MGI:3051915 MGI:3656469 NCBI chr 9:16,167,504...16,492,826
Ensembl chr 9:16,167,482...16,492,167
JBrowse link
G Scn10a sodium voltage-gated channel alpha subunit 10 IEP RGD PMID:21640979 RGD:6484223 NCBI chr 8:119,350,723...119,462,882
Ensembl chr 8:119,350,724...119,462,614
JBrowse link
G Scn5a sodium voltage-gated channel alpha subunit 5 IEP RGD PMID:21640979 RGD:6484223 NCBI chr 8:119,220,905...119,318,816
Ensembl chr 8:119,220,905...119,318,769
JBrowse link
G Shh sonic hedgehog signaling molecule acts_upstream_of_or_within
involved_in
ISO
IEA
MGI:1934268|MGI:2445832 (MGI:1926240|PMID:11044393)
GO_REF:0000107
RGD
Ensembl
PMID:11044393 GO_REF:0000107 MGI:1926240 NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170
JBrowse link
G Smo smoothened, frizzled class receptor involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1934268|MGI:2176256|MGI:2445832 (MGI:2429663|PMID:12403705), (MGI:3696007|PMID:17199044)
Ensembl
RGD
PMID:12403705 PMID:17199044 GO_REF:0000107 MGI:2429663 MGI:3696007 NCBI chr 4:58,344,101...58,372,828
Ensembl chr 4:58,343,529...58,373,829
JBrowse link
G Sostdc1 sclerostin domain containing 1 acts_upstream_of_or_within ISO MGI:3604658|MGI:88180 (MGI:3603904|PMID:16179481) RGD PMID:16179481 MGI:3603904 NCBI chr 6:53,051,336...53,055,510
Ensembl chr 6:53,051,354...53,055,579
JBrowse link
G Tbx1 T-box transcription factor 1 involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
MGI:2179136 (MGI:3848106|PMID:19233155), (MGI:4848250|PMID:20816801)
UniProt
RGD
PMID:19233155 PMID:20816801 GO_REF:0000024 MGI:3848106 MGI:4848250 NCBI chr11:82,409,275...82,419,058
Ensembl chr11:82,409,275...82,418,380
JBrowse link
G Tcf7l2 transcription factor 7 like 2 acts_upstream_of_or_within ISO MGI:96770 (MGI:3722225|PMID:17699607) RGD PMID:17699607 MGI:3722225 NCBI chr 1:254,785,956...254,978,967
Ensembl chr 1:254,786,091...254,978,967
JBrowse link
G Tgfb1 transforming growth factor, beta 1 IEP RGD PMID:29175126 RGD:14995479 NCBI chr 1:81,196,532...81,212,848
Ensembl chr 1:81,196,532...81,212,847
JBrowse link
G Tnc tenascin C IEP RGD PMID:12971948 RGD:4889616 NCBI chr 5:77,375,851...77,460,712
Ensembl chr 5:77,375,851...77,460,624
JBrowse link
G Tp63 tumor protein p63 acts_upstream_of_or_within ISO MGI:1934269|MGI:1934580 (MGI:3612725|PMID:16410075), (MGI:3621088|PMID:16524929) RGD PMID:16410075 PMID:16524929 MGI:3612725 MGI:3621088 NCBI chr11:74,838,858...75,049,764
Ensembl chr11:74,838,859...75,049,398
JBrowse link
G Traf6 TNF receptor associated factor 6 acts_upstream_of_or_within ISO MGI:2675469 (MGI:2684502|PMID:14699584) RGD PMID:14699584 MGI:2684502 NCBI chr 3:87,963,517...87,988,316
Ensembl chr 3:87,963,514...87,983,507
JBrowse link
G Wnt6 Wnt family member 6 involved_in ISO (PMID:20113781) RGD PMID:20113781 NCBI chr 9:76,329,882...76,343,523
Ensembl chr 9:76,329,882...76,343,523
JBrowse link
G Wnt7b Wnt family member 7B acts_upstream_of_or_within ISO (MGI:1855801|PMID:10781055) RGD PMID:10781055 MGI:1855801 NCBI chr 7:116,634,817...116,679,089
Ensembl chr 7:116,634,814...116,679,581
JBrowse link
positive regulation of dentin-containing tooth bud formation by mesenchymal-epithelial signaling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mir875 microRNA 875 involved_in ISO (MGI:6405074|PMID:32188878) RGD PMID:32188878 MGI:6405074 NCBI chr 7:66,861,955...66,862,027
Ensembl chr 7:66,861,955...66,862,027
JBrowse link
positive regulation of enamel mineralization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Amtn amelotin involved_in IBA
ISS
ISO
PMID:21873635
GO_REF:0000024
(MGI:5613837|PMID:25407797)
UniProt
RGD
PMID:25407797 PMID:21873635 GO_REF:0000024 MGI:5613837, RGD:13792537 NCBI chr14:19,648,624...19,661,181
Ensembl chr14:19,648,625...19,661,181
JBrowse link
G Cftr CF transmembrane conductance regulator involved_in IEA
ISO
GO_REF:0000107
(MGI:6716964|PMID:26403673)
Ensembl
RGD
PMID:26403673 GO_REF:0000107 MGI:6716964 NCBI chr 4:46,561,269...46,728,759
Ensembl chr 4:46,560,885...46,728,756
JBrowse link
G Dspp dentin sialophosphoprotein acts_upstream_of_or_within ISO (MGI:3603472|PMID:16014627) RGD PMID:16014627 MGI:3603472 NCBI chr14:5,565,562...5,571,669
Ensembl chr14:5,565,629...5,571,672
JBrowse link
G Enam enamelin involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:3796583 (MGI:5647983|PMID:24603688)
RGD PMID:24603688 PMID:21873635 MGI:5647983, RGD:13792537 NCBI chr14:19,556,729...19,581,433
Ensembl chr14:19,556,729...19,581,425
JBrowse link
G Odaph odontogenesis associated phosphoprotein involved_in ISO
ISS
IBA
(PMID:22901946)
GO_REF:0000024
PMID:21873635
RGD
UniProt
PMID:22901946 PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr14:16,071,835...16,084,210
Ensembl chr14:16,073,058...16,080,129
JBrowse link
G Slc4a2 solute carrier family 4 member 2 involved_in ISO (MGI:6716964|PMID:26403673) RGD PMID:26403673 MGI:6716964 NCBI chr 4:10,736,419...10,754,407
Ensembl chr 4:10,736,425...10,752,965
JBrowse link
positive regulation of odontogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp2 bone morphogenetic protein 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:69105|PMID:7848824)
Ensembl
RGD
PMID:7848824 GO_REF:0000107 MGI:69105 NCBI chr 3:120,812,660...120,822,579
Ensembl chr 3:120,812,882...120,821,397
JBrowse link
G Cd34 CD34 molecule involved_in ISS
ISO
GO_REF:0000024
(PMID:12939361)
UniProt
RGD
PMID:12939361 GO_REF:0000024 NCBI chr13:106,480,074...106,499,462
Ensembl chr13:106,480,043...106,499,832
JBrowse link
G Edn1 endothelin 1 IDA RGD PMID:16843458 RGD:4892598 NCBI chr17:22,454,924...22,460,812
Ensembl chr17:22,454,420...22,460,885
JBrowse link
G Ednra endothelin receptor type A IMP RGD PMID:16843458 RGD:4892598 NCBI chr19:30,233,540...30,303,727
Ensembl chr19:30,233,571...30,297,049
JBrowse link
G Tgfb1 transforming growth factor, beta 1 acts_upstream_of_or_within ISO (MGI:69105|PMID:7848824) RGD PMID:7848824 MGI:69105 NCBI chr 1:81,196,532...81,212,848
Ensembl chr 1:81,196,532...81,212,847
JBrowse link
positive regulation of odontogenesis of dentin-containing tooth term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Csf1 colony stimulating factor 1 acts_upstream_of_or_within ISO MGI:1856333 (MGI:2670279|PMID:12865350) RGD PMID:12865350 MGI:2670279 NCBI chr 2:195,377,215...195,396,608
Ensembl chr 2:195,377,215...195,411,704
JBrowse link
G Ngfr nerve growth factor receptor involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1857226 (MGI:895167|PMID:9268129)
Ensembl
RGD
PMID:9268129 GO_REF:0000107 MGI:895167 NCBI chr10:80,515,287...80,533,518
Ensembl chr10:80,515,299...80,533,518
JBrowse link
G Prkcb protein kinase C, beta IEP RGD PMID:15763930 RGD:1625521 NCBI chr 1:176,832,173...177,163,539
Ensembl chr 1:176,832,226...177,163,536
JBrowse link
positive regulation of tooth mineralization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tfap2a transcription factor AP-2 alpha involved_in ISO
ISS
(PMID:19578371)
GO_REF:0000024
RGD
UniProt
PMID:19578371 GO_REF:0000024 NCBI chr17:24,028,716...24,047,507
Ensembl chr17:24,024,432...24,047,507
JBrowse link
G Wnt6 Wnt family member 6 involved_in ISO (PMID:20113781) RGD PMID:20113781 NCBI chr 9:76,329,882...76,343,523
Ensembl chr 9:76,329,882...76,343,523
JBrowse link
regulation of enamel mineralization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dicer1 dicer 1 ribonuclease III acts_upstream_of_or_within ISO MGI:3589208 (MGI:4453947|PMID:20102707) RGD PMID:20102707 MGI:4453947 NCBI chr 6:123,627,529...123,692,278
Ensembl chr 6:123,631,250...123,693,965
JBrowse link
G Dmp1 dentin matrix acidic phosphoprotein 1 acts_upstream_of_or_within ISO (MGI:3603472|PMID:16014627) RGD PMID:16014627 MGI:3603472 NCBI chr14:5,528,441...5,542,078
Ensembl chr14:5,528,431...5,539,323
JBrowse link
regulation of odontogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Msx1 msh homeobox 1 acts_upstream_of_or_within ISO MGI:97493 (MGI:4453942|PMID:20123092) RGD PMID:20123092 MGI:4453942 NCBI chr14:72,961,170...72,964,970
Ensembl chr14:72,961,148...72,964,966
JBrowse link
G Pax9 paired box 9 acts_upstream_of_or_within ISO MGI:97168 (MGI:4453942|PMID:20123092) RGD PMID:20123092 MGI:4453942 NCBI chr 6:74,186,749...74,203,508
Ensembl chr 6:74,182,568...74,203,506
JBrowse link
G Shh sonic hedgehog signaling molecule involved_in IEA
ISO
GO_REF:0000107
(MGI:4949552|PMID:21447550)
Ensembl
RGD
PMID:21447550 GO_REF:0000107 MGI:4949552 NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170
JBrowse link
G Sp6 Sp6 transcription factor acts_upstream_of_or_within ISO MGI:3775913 (MGI:3775330|PMID:18156176) RGD PMID:18156176 MGI:3775330 NCBI chr10:82,005,518...82,009,699
Ensembl chr10:82,005,294...82,011,013
JBrowse link
regulation of odontogenesis of dentin-containing tooth term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apcdd1 APC down-regulated 1 involved_in ISO (MGI:6379934|PMID:26170146) RGD PMID:26170146 MGI:6379934 NCBI chr18:56,385,398...56,416,065
Ensembl chr18:56,385,264...56,416,070
JBrowse link
G Bmp2 bone morphogenetic protein 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:88180|MGI:99604 (MGI:894889|PMID:9244299)
Ensembl
RGD
PMID:9244299 GO_REF:0000107 MGI:894889 NCBI chr 3:120,812,660...120,822,579
Ensembl chr 3:120,812,882...120,821,397
JBrowse link
G Bmp4 bone morphogenetic protein 4 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:88177|MGI:99604 (MGI:894889|PMID:9244299)
Ensembl
RGD
PMID:9244299 GO_REF:0000107 MGI:894889 NCBI chr15:19,618,538...19,633,494
Ensembl chr15:19,618,542...19,623,306
JBrowse link
G Dicer1 dicer 1 ribonuclease III acts_upstream_of_or_within ISO MGI:3589208 (MGI:4453947|PMID:20102707) RGD PMID:20102707 MGI:4453947 NCBI chr 6:123,627,529...123,692,278
Ensembl chr 6:123,631,250...123,693,965
JBrowse link
G Dmrt3 doublesex and mab-3 related transcription factor 3 acts_upstream_of_or_within ISO MGI:4420993 (MGI:3766841|PMID:17803355) RGD PMID:17803355 MGI:3766841 NCBI chr 1:223,244,340...223,264,254
Ensembl chr 1:223,248,747...223,262,530
JBrowse link
G Fgf8 fibroblast growth factor 8 acts_upstream_of_or_within ISO MGI:88177|MGI:88180 (MGI:894889|PMID:9244299) RGD PMID:9244299 MGI:894889 NCBI chr 1:244,584,477...244,590,359
Ensembl chr 1:244,584,652...244,590,359
JBrowse link
G Ift88 intraflagellar transport 88 acts_upstream_of_or_within ISO MGI:2157527 (MGI:2660994|PMID:12701101) RGD PMID:12701101 MGI:2660994 NCBI chr15:31,573,325...31,666,068
Ensembl chr15:31,573,376...31,672,147
JBrowse link
G Runx2 RUNX family transcription factor 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2176465 (MGI:2683810|PMID:14688224)
Ensembl
RGD
PMID:14688224 GO_REF:0000107 MGI:2683810 NCBI chr 9:16,167,504...16,492,826
Ensembl chr 9:16,167,482...16,492,167
JBrowse link
G Wnt10a Wnt family member 10A acts_upstream_of_or_within ISO (MGI:3712614|PMID:17286598) RGD PMID:17286598 MGI:3712614 NCBI chr 9:76,349,931...76,362,400
Ensembl chr 9:76,349,931...76,362,400
JBrowse link
tooth eruption term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adamts1 ADAM metallopeptidase with thrombospondin type 1 motif, 1 IEP RGD PMID:16200461 RGD:9684848 NCBI chr11:24,932,227...24,941,068
Ensembl chr11:24,931,761...24,941,103
JBrowse link
G Adamts4 ADAM metallopeptidase with thrombospondin type 1 motif, 4 IEP RGD PMID:16200461 RGD:9684848 NCBI chr13:83,670,556...83,680,045
Ensembl chr13:83,670,183...83,680,065
JBrowse link
G Adamts5 ADAM metallopeptidase with thrombospondin type 1 motif, 5 IEP RGD PMID:16200461 RGD:9684848 NCBI chr11:25,000,627...25,047,205
Ensembl chr11:25,000,637...25,047,205
JBrowse link
G Ccdc154 coiled-coil domain containing 154 acts_upstream_of_or_within ISO MGI:5702426 (MGI:5697796|PMID:20121924) RGD PMID:20121924 MGI:5697796 NCBI chr10:14,177,271...14,187,378
Ensembl chr10:14,177,278...14,187,253
JBrowse link
G Col1a1 collagen type I alpha 1 chain IEP RGD PMID:12351664 RGD:8552770 NCBI chr10:79,883,622...79,900,625
Ensembl chr10:79,883,622...79,900,624
JBrowse link
G Csf1r colony stimulating factor 1 receptor IEP RGD PMID:9168857 RGD:151665780 NCBI chr18:54,546,673...54,590,418
Ensembl chr18:54,546,659...54,590,415
JBrowse link
G Fam20a FAM20A, golgi associated secretory pathway pseudokinase involved_in ISO (PMID:21990045), (PMID:23434854), (PMID:23468644), (PMID:23697977) RGD PMID:21990045 PMID:23434854 PMID:23468644 PMID:23697977 NCBI chr10:94,638,836...94,697,814
Ensembl chr10:94,642,850...94,697,672
JBrowse link
G Snx10 sorting nexin 10 acts_upstream_of_or_within ISO MGI:5690193 (MGI:5688814|PMID:25811986) RGD PMID:25811986 MGI:5688814 NCBI chr 4:80,612,648...80,677,005
Ensembl chr 4:80,612,669...80,676,996
JBrowse link
G Tcirg1 T-cell immune regulator 1, ATPase H+ transporting V0 subunit A3 acts_upstream_of_or_within ISO MGI:1856973 (MGI:5318178|PMID:22245629) RGD PMID:22245629 MGI:5318178 NCBI chr 1:201,127,034...201,138,787
Ensembl chr 1:201,127,034...201,138,742
JBrowse link
G Tnfsf11 TNF superfamily member 11 acts_upstream_of_or_within
involved_in
ISO
IEA
MGI:5614816 (MGI:5646594|PMID:26234751)
GO_REF:0000107
RGD
Ensembl
PMID:26234751 GO_REF:0000107 MGI:5646594 NCBI chr15:53,674,990...53,705,171
Ensembl chr15:53,673,877...53,705,445
JBrowse link
tooth mineralization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Amelx amelogenin, X-linked involved_in ISO (PMID:1483698)
(MGI:2149207|PMID:11406633)
RGD PMID:1483698 PMID:11406633 MGI:2149207 NCBI chr  X:25,076,362...25,087,660
Ensembl chr  X:25,076,362...25,087,660
JBrowse link
G Col1a1 collagen type I alpha 1 chain involved_in ISO (PMID:17118335) RGD PMID:17118335 NCBI chr10:79,883,622...79,900,625
Ensembl chr10:79,883,622...79,900,624
JBrowse link
G Enpp1 ectonucleotide pyrophosphatase/phosphodiesterase 1 involved_in ISO MGI:5607149 (MGI:6431370|PMID:29533727) RGD PMID:29533727 MGI:6431370 NCBI chr 1:20,698,746...20,763,741
Ensembl chr 1:20,698,764...20,763,715
JBrowse link
G Tspear thrombospondin-type laminin G domain and EAR repeats involved_in ISO (PMID:27736875) RGD PMID:27736875 NCBI chr20:10,771,806...10,837,419
Ensembl chr20:10,772,219...10,943,914
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 18734
    developmental process 6893
      anatomical structure morphogenesis 2987
        animal organ morphogenesis 1182
          odontogenesis 163
            negative regulation of odontogenesis + 3
            odontogenesis of dentin-containing tooth + 108
            positive regulation of odontogenesis + 9
            regulation of odontogenesis + 24
            tooth eruption 10
            tooth mineralization + 35
            tooth replacement 0
Path 2
Term Annotations click to browse term
  biological_process 18734
    developmental process 6893
      anatomical structure development 6368
        anatomical structure morphogenesis 2987
          animal organ morphogenesis 1182
            odontogenesis 163
              negative regulation of odontogenesis + 3
              odontogenesis of dentin-containing tooth + 108
              positive regulation of odontogenesis + 9
              regulation of odontogenesis + 24
              tooth eruption 10
              tooth mineralization + 35
              tooth replacement 0
paths to the root