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ONTOLOGY REPORT - ANNOTATIONS

Term:photoreceptor cell development
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Accession:GO:0042461 term browser browse the term
Definition:Development of a photoreceptor, a cell that responds to incident electromagnetic radiation, particularly visible light.
Synonyms:exact_synonym: photoreceptor morphogenesis
 alt_id: GO:0046531

GViewer not supported for the selected species.

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photoreceptor cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arl3 ADP ribosylation factor like GTPase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936600:3,190,212...3,229,831
Ensembl chrNW_004936600:3,190,208...3,232,755 		JBrowse link
G Rp1 RP1 axonemal microtubule associated involved_in ISO (MGI:3604930|PMID:16126734) UniProt PMID:16126734 MGI:3604930 NCBI chrNW_004936496:1,524,123...1,583,114 JBrowse link
G Rp1l1 RP1 like 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936675:2,527,406...2,564,464 JBrowse link
eye photoreceptor cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ahi1 Abelson helper integration site 1 involved_in ISO (MGI:4437526|PMID:20081859) CACAO PMID:20081859 MGI:4437526 NCBI chrNW_004936560:2,881,631...3,057,256
Ensembl chrNW_004936560:2,881,977...3,038,725 		JBrowse link
G Crb1 crumbs cell polarity complex component 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21052544)
(PMID:12915475)		 Ensembl
MGI		 PMID:12915475 PMID:21052544 GO_REF:0000107 NCBI chrNW_004936567:6,347,661...6,559,731
Ensembl chrNW_004936567:6,366,489...6,559,766 		JBrowse link
G Dzank1 double zinc ribbon and ankyrin repeat domains 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936485:1,814,577...1,888,961
Ensembl chrNW_004936485:1,813,709...1,889,747 		JBrowse link
G Fscn2 fascin actin-bundling protein 2, retinal involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16043865) Ensembl
MGI		 PMID:16043865 GO_REF:0000107 NCBI chrNW_004936594:5,184,133...5,195,340
Ensembl chrNW_004936594:5,184,628...5,191,985 		JBrowse link
G Gabrr2 gamma-aminobutyric acid type A receptor subunit rho2 NOT|acts_upstream_of_or_within ISO (PMID:12019334) MGI PMID:12019334 NCBI chrNW_004936510:2,891,136...2,949,428
Ensembl chrNW_004936510:2,891,101...2,951,071 		JBrowse link
G Gnat1 G protein subunit alpha transducin 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16249514) Ensembl
MGI		 PMID:16249514 GO_REF:0000107 NCBI chrNW_004936529:1,735,258...1,740,297
Ensembl chrNW_004936529:1,735,440...1,742,567 		JBrowse link
G Gngt1 G protein subunit gamma transducin 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18367617) Ensembl
MGI		 PMID:18367617 GO_REF:0000107 NCBI chrNW_004936803:67,933...71,508
Ensembl chrNW_004936803:67,608...71,541 		JBrowse link
G Mfrp membrane frizzled-related protein involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21052544) Ensembl
MGI		 PMID:21052544 GO_REF:0000107 NCBI chrNW_004936542:4,272,250...4,277,231
Ensembl chrNW_004936542:4,272,264...4,277,252 		JBrowse link
G Nr2e3 nuclear receptor subfamily 2 group E member 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21052544) Ensembl
MGI		 PMID:21052544 GO_REF:0000107 NCBI chrNW_004936471:31,229,322...31,236,093
Ensembl chrNW_004936471:31,229,564...31,235,654 		JBrowse link
G Olfm3 olfactomedin 3 ISO RGD PMID:12019210 RGD:633402 NCBI chrNW_004936748:1,773,994...1,979,727
Ensembl chrNW_004936748:1,773,994...1,821,495 		JBrowse link
G Pax6 paired box 6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12648492) Ensembl
MGI		 PMID:12648492 GO_REF:0000107 NCBI chrNW_004936533:5,952,529...5,980,889
Ensembl chrNW_004936533:5,957,971...5,982,075 		JBrowse link
G Pdgfb platelet derived growth factor subunit B acts_upstream_of_or_within ISO (PMID:25224828) MGI PMID:25224828 NCBI chrNW_004936492:2,353,840...2,368,573
Ensembl chrNW_004936492:2,353,841...2,368,573 		JBrowse link
G Prdm1 PR/SET domain 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20463215) Ensembl
MGI		 PMID:20463215 GO_REF:0000107 NCBI chrNW_004936564:2,594,362...2,690,680
Ensembl chrNW_004936564:2,667,660...2,690,683 		JBrowse link
G Prkci protein kinase C iota involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16267237) Ensembl
MGI		 PMID:16267237 GO_REF:0000107 NCBI chrNW_004936593:2,170,539...2,236,904
Ensembl chrNW_004936593:2,170,808...2,236,673 		JBrowse link
G Rdh13 retinol dehydrogenase 13 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22605914) Ensembl
MGI		 PMID:22605914 GO_REF:0000107 NCBI chrNW_004936886:356,068...368,525
Ensembl chrNW_004936886:355,879...368,608 		JBrowse link
G Rorb RAR related orphan receptor B involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936503:10,294,530...10,473,070
Ensembl chrNW_004936503:10,295,167...10,470,813 		JBrowse link
G Rpgr retinitis pigmentosa GTPase regulator acts_upstream_of_or_within ISO (PMID:12651948) MGI PMID:12651948 NCBI chrNW_004936502:5,163,164...5,212,940 JBrowse link
G Rpgrip1 RPGR interacting protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12651948) Ensembl
MGI		 PMID:12651948 GO_REF:0000107 NCBI chrNW_004936880:440,900...511,503
Ensembl chrNW_004936880:440,737...512,685 		JBrowse link
G Th tyrosine hydroxylase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936794:478,651...486,887
Ensembl chrNW_004936794:478,614...487,061 		JBrowse link
G Tulp1 TUB like protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936476:23,744,707...23,757,002
Ensembl chrNW_004936476:23,744,757...23,756,565 		JBrowse link
G Vegfa vascular endothelial growth factor A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16251428) Ensembl
MGI		 PMID:16251428 GO_REF:0000107 NCBI chrNW_004936476:16,245,134...16,261,180
Ensembl chrNW_004936476:16,247,100...16,260,673 		JBrowse link
photoreceptor cell morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bbs1 Bardet-Biedl syndrome 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18032602) Ensembl
MGI		 PMID:18032602 GO_REF:0000107 NCBI chrNW_004936599:3,059,274...3,076,853
Ensembl chrNW_004936599:3,059,148...3,076,299 		JBrowse link
G Cabp4 calcium binding protein 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16249514) Ensembl
MGI		 PMID:16249514 GO_REF:0000107 NCBI chrNW_004936599:2,295,124...2,299,558
Ensembl chrNW_004936599:2,293,000...2,300,322 		JBrowse link
G Cdhr1 cadherin related family member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936767:805,910...829,838
Ensembl chrNW_004936767:805,558...827,712 		JBrowse link
G Cfap418 cilia and flagella associated protein 418 involved_in ISO (MGI:6148650|PMID:29440555) UniProt PMID:29440555 MGI:6148650 NCBI chrNW_004936544:8,170,841...8,192,896
Ensembl chrNW_004936544:8,170,081...8,192,835 		JBrowse link
G Grk1 G protein-coupled receptor kinase 1 acts_upstream_of_or_within ISO (PMID:10097103) MGI PMID:10097103 NCBI chrNW_004936472:152,202...165,134
Ensembl chrNW_004936472:151,854...165,281 		JBrowse link
G Mfsd2a MFSD2 lysolipid transporter A, lysophospholipid acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:5789479|PMID:27008858) ARUK-UCL
Ensembl		 PMID:27008858 GO_REF:0000107 MGI:5789479 NCBI chrNW_004936474:21,790,807...21,803,336
Ensembl chrNW_004936474:21,790,747...21,803,360 		JBrowse link
G Rabl2b RAB, member of RAS oncogene family like 2B involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936629:60,924...75,273 JBrowse link
photoreceptor cell outer segment organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ahi1 Abelson helper integration site 1 involved_in
acts_upstream_of_or_within		 ISO (MGI:4437526|PMID:20081859)
(PMID:20592197)		 UniProt
MGI		 PMID:20081859 PMID:20592197 MGI:4437526 NCBI chrNW_004936560:2,881,631...3,057,256
Ensembl chrNW_004936560:2,881,977...3,038,725 		JBrowse link
G Bbs4 Bardet-Biedl syndrome 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23178122) Ensembl
MGI		 PMID:23178122 GO_REF:0000107 NCBI chrNW_004936471:31,962,500...32,019,516
Ensembl chrNW_004936471:31,962,336...32,020,712 		JBrowse link
G Cdhr1 cadherin related family member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936767:805,910...829,838
Ensembl chrNW_004936767:805,558...827,712 		JBrowse link
G Cngb1 cyclic nucleotide gated channel subunit beta 1 acts_upstream_of_or_within ISO (PMID:23178122) MGI PMID:23178122 NCBI chrNW_004936475:9,844,438...9,908,009 JBrowse link
G Crb1 crumbs cell polarity complex component 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12915475) Ensembl
MGI		 PMID:12915475 GO_REF:0000107 NCBI chrNW_004936567:6,347,661...6,559,731
Ensembl chrNW_004936567:6,366,489...6,559,766 		JBrowse link
G Ift140 intraflagellar transport 140 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24619649) Ensembl
MGI		 PMID:24619649 GO_REF:0000107 NCBI chrNW_004936694:2,344,448...2,419,396
Ensembl chrNW_004936694:2,344,283...2,423,520 		JBrowse link
G Ift20 intraflagellar transport 20 acts_upstream_of_or_within ISO (PMID:21307337) MGI PMID:21307337 NCBI chrNW_004936538:4,484,484...4,491,688 JBrowse link
G Mfsd2a MFSD2 lysolipid transporter A, lysophospholipid acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:5789479|PMID:27008858) ARUK-UCL
Ensembl		 PMID:27008858 GO_REF:0000107 MGI:5789479 NCBI chrNW_004936474:21,790,807...21,803,336
Ensembl chrNW_004936474:21,790,747...21,803,360 		JBrowse link
G Nphp4 nephrocystin 4 acts_upstream_of_or_within ISO (PMID:21078623) MGI PMID:21078623 NCBI chrNW_004936623:802,152...904,198 JBrowse link
G Pcare photoreceptor cilium actin regulator involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:25616964) Ensembl
MGI
TreeGrafter		 PMID:25616964 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936493:3,768,032...3,781,511
Ensembl chrNW_004936493:3,768,688...3,777,634 		JBrowse link
G Prph2 peripherin 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:28053051) Ensembl
MGI		 PMID:28053051 GO_REF:0000107 NCBI chrNW_004936476:17,159,756...17,174,226
Ensembl chrNW_004936476:17,160,016...17,173,981 		JBrowse link
G Rom1 retinal outer segment membrane protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:28053051) Ensembl
MGI		 PMID:28053051 GO_REF:0000107 NCBI chrNW_004936581:642,322...644,286
Ensembl chrNW_004936581:641,753...644,637 		JBrowse link
G Rp1 RP1 axonemal microtubule associated involved_in ISO (MGI:2676521|PMID:14507858) UniProt PMID:14507858 MGI:2676521 NCBI chrNW_004936496:1,524,123...1,583,114 JBrowse link
G Tmem67 transmembrane protein 67 ISO RGD PMID:23516626 RGD:11535084 NCBI chrNW_004936544:6,887,867...6,931,669
Ensembl chrNW_004936544:6,887,532...6,932,179 		JBrowse link
retinal cone cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ahi1 Abelson helper integration site 1 involved_in ISO (MGI:4437526|PMID:20081859) CACAO PMID:20081859 MGI:4437526 NCBI chrNW_004936560:2,881,631...3,057,256
Ensembl chrNW_004936560:2,881,977...3,038,725 		JBrowse link
G Cabp4 calcium binding protein 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16249514) Ensembl
MGI		 PMID:16249514 GO_REF:0000107 NCBI chrNW_004936599:2,295,124...2,299,558
Ensembl chrNW_004936599:2,293,000...2,300,322 		JBrowse link
G Cnga3 cyclic nucleotide gated channel subunit alpha 3 acts_upstream_of_or_within ISO (PMID:21052544) MGI PMID:21052544 NCBI chrNW_004936744:1,499,431...1,537,784
Ensembl chrNW_004936744:1,514,821...1,540,580 		JBrowse link
G Crb2 crumbs cell polarity complex component 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936487:11,793,078...11,813,803
Ensembl chrNW_004936487:11,793,005...11,812,934 		JBrowse link
G Dio3 iodothyronine deiodinase 3 acts_upstream_of
acts_upstream_of_or_within		 ISO (PMID:20203194) MGI PMID:20203194 NCBI chrNW_004936604:5,241,877...5,243,910 JBrowse link
G Gnat2 G protein subunit alpha transducin 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17065522), (PMID:21052544) Ensembl
MGI		 PMID:17065522 PMID:21052544 GO_REF:0000107 NCBI chrNW_004936704:1,079,255...1,093,732
Ensembl chrNW_004936704:1,084,587...1,093,691 		JBrowse link
G Hcn1 hyperpolarization activated cyclic nucleotide gated potassium channel 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21052544) Ensembl
MGI		 PMID:21052544 GO_REF:0000107 NCBI chrNW_004936480:17,051,902...17,416,335
Ensembl chrNW_004936480:17,051,898...17,413,657 		JBrowse link
G Pde6c phosphodiesterase 6C involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21052544) Ensembl
MGI		 PMID:21052544 GO_REF:0000107 NCBI chrNW_004936601:1,343,538...1,393,605
Ensembl chrNW_004936601:1,341,658...1,393,377 		JBrowse link
G Rorb RAR related orphan receptor B involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936503:10,294,530...10,473,070
Ensembl chrNW_004936503:10,295,167...10,470,813 		JBrowse link
G Rp1 RP1 axonemal microtubule associated involved_in ISO (MGI:2676521|PMID:14507858) UniProt PMID:14507858 MGI:2676521 NCBI chrNW_004936496:1,524,123...1,583,114 JBrowse link
G Thrb thyroid hormone receptor beta involved_in
acts_upstream_of		 IEA
ISO		 (PMID:20203194) Ensembl
MGI		 PMID:20203194 GO_REF:0000107 NCBI chrNW_004936473:15,766,214...15,986,389
Ensembl chrNW_004936473:15,770,146...15,986,561 		JBrowse link
G Thy1 Thy-1 cell surface antigen involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936542:4,323,905...4,329,940
Ensembl chrNW_004936542:4,323,408...4,330,077 		JBrowse link
G Ush1c USH1 protein network component harmonin involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936528:1,552,175...1,594,740
Ensembl chrNW_004936528:1,552,289...1,594,801 		JBrowse link
retinal rod cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ahi1 Abelson helper integration site 1 involved_in ISO (MGI:4437526|PMID:20081859) CACAO PMID:20081859 MGI:4437526 NCBI chrNW_004936560:2,881,631...3,057,256
Ensembl chrNW_004936560:2,881,977...3,038,725 		JBrowse link
G Alms1 ALMS1 centrosome and basal body associated protein acts_upstream_of_or_within ISO (PMID:16000322) MGI PMID:16000322 NCBI chrNW_004936491:17,152,759...17,342,648 JBrowse link
G Bbs4 Bardet-Biedl syndrome 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15173597) Ensembl
MGI		 PMID:15173597 GO_REF:0000107 NCBI chrNW_004936471:31,962,500...32,019,516
Ensembl chrNW_004936471:31,962,336...32,020,712 		JBrowse link
G Naglu N-acetyl-alpha-glucosaminidase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17712420) Ensembl
MGI		 PMID:17712420 GO_REF:0000107 NCBI chrNW_004936490:17,305,033...17,312,167
Ensembl chrNW_004936490:17,304,586...17,314,521 		JBrowse link
G Nrl neural retina leucine zipper involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11694879) Ensembl
MGI
TreeGrafter		 PMID:11694879 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936722:448,006...454,064
Ensembl chrNW_004936722:447,967...454,553 		JBrowse link
G Ntrk2 neurotrophic receptor tyrosine kinase 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10516311) Ensembl
MGI		 PMID:10516311 GO_REF:0000107 NCBI chrNW_004936680:267,850...621,467
Ensembl chrNW_004936680:267,596...615,928 		JBrowse link
G Rorb RAR related orphan receptor B involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936503:10,294,530...10,473,070
Ensembl chrNW_004936503:10,295,167...10,470,813 		JBrowse link
G Rp1 RP1 axonemal microtubule associated involved_in ISO (MGI:2676521|PMID:14507858) UniProt PMID:14507858 MGI:2676521 NCBI chrNW_004936496:1,524,123...1,583,114 JBrowse link
G Rpgrip1 RPGR interacting protein 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936880:440,900...511,503
Ensembl chrNW_004936880:440,737...512,685 		JBrowse link
G Rpgrip1l RPGRIP1 like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936475:6,219,187...6,321,612
Ensembl chrNW_004936475:6,215,475...6,321,618 		JBrowse link
G Samd7 sterile alpha motif domain containing 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936593:2,475,199...2,500,593
Ensembl chrNW_004936593:2,472,946...2,500,604 		JBrowse link
G Trpm1 transient receptor potential cation channel subfamily M member 1 acts_upstream_of_or_within ISO (PMID:19966281) MGI PMID:19966281 NCBI chrNW_004936483:723,784...856,839
Ensembl chrNW_004936483:724,018...858,855 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 15969
    developmental process 6329
      anatomical structure development 5961
        cell development 3054
          neuron development 1347
            photoreceptor cell development 56
              eye photoreceptor cell development + 40
              ocellus photoreceptor cell development 0
              photoreceptor cell morphogenesis + 7
              photoreceptor cell outer segment organization 14
Path 2
Term Annotations click to browse term
  biological_process 15969
    developmental process 6329
      anatomical structure development 5961
        multicellular organism development 4836
          system development 4211
            nervous system development 2647
              neurogenesis 1985
                generation of neurons 1708
                  neuron differentiation 1628
                    neuron development 1347
                      photoreceptor cell development 56
                        eye photoreceptor cell development + 40
                        ocellus photoreceptor cell development 0
                        photoreceptor cell morphogenesis + 7
                        photoreceptor cell outer segment organization 14
paths to the root