Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   

ONTOLOGY REPORT - ANNOTATIONS


Term:serotonin biosynthetic process
go back to main search page
Accession:GO:0042427 term browser browse the term
Definition:The chemical reactions and pathways resulting in the formation of serotonin (5-hydroxytryptamine), a monoamine neurotransmitter occurring in the peripheral and central nervous systems, also having hormonal properties.
Synonyms:exact_synonym: serotonin anabolism;   serotonin biosynthesis;   serotonin formation;   serotonin synthesis
 xref: Wikipedia:Serotonin


GViewer not supported for the selected species.

show annotations for term's descendants           Sort by:
 
serotonin biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ddc dopa decarboxylase ISO RGD PMID:10027744 RGD:5129182 NCBI chrNW_004955456:3,513,779...3,582,851
Ensembl chrNW_004955456:3,513,042...3,582,911
JBrowse link
G Tph1 tryptophan hydroxylase 1 involved_in ISO (MGI:2683993|PMID:14697203) UniProt PMID:14697203 MGI:2683993 NCBI chrNW_004955414:32,803,417...32,828,682
Ensembl chrNW_004955414:32,800,477...32,828,501
JBrowse link
regulation of serotonin biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh2 aldehyde dehydrogenase 2 family member involved_in ISO (MGI:6827320|PMID:26711020) UniProt PMID:26711020 MGI:6827320 NCBI chrNW_004955482:8,352,569...8,383,097
Ensembl chrNW_004955482:8,352,569...8,384,899
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 12099
    metabolic process 7720
      nitrogen compound metabolic process 6464
        ammonium ion metabolic process 21
          serotonin metabolic process 13
            serotonin biosynthetic process 3
              negative regulation of serotonin biosynthetic process 0
              positive regulation of serotonin biosynthetic process 0
              regulation of serotonin biosynthetic process + 1
              serotonin biosynthetic process from tryptophan + 0
Path 2
Term Annotations click to browse term
  biological_process 12099
    metabolic process 7720
      cellular metabolic process 7078
        cellular aromatic compound metabolic process 3855
          phenol-containing compound metabolic process 106
            serotonin metabolic process 13
              serotonin biosynthetic process 3
                negative regulation of serotonin biosynthetic process 0
                positive regulation of serotonin biosynthetic process 0
                regulation of serotonin biosynthetic process + 1
                serotonin biosynthetic process from tryptophan + 0
paths to the root