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ONTOLOGY REPORT - ANNOTATIONS


Term:extrinsic component of endoplasmic reticulum membrane
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Accession:GO:0042406 term browser browse the term
Definition:The component of the endoplasmic reticulum membrane consisting of gene products and protein complexes that are loosely bound to one of its surfaces, but not integrated into the hydrophobic region.
Synonyms:exact_synonym: extrinsic to ER membrane
 narrow_synonym: extrinsic to endoplasmic reticulum membrane



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extrinsic component of endoplasmic reticulum membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh3a2 aldehyde dehydrogenase 3 family, member A2 IDA RGD PMID:1717467 RGD:61536 NCBI chr10:45,928,313...45,949,366
Ensembl chr10:45,908,524...45,949,281
JBrowse link
G Ccdc115 coiled-coil domain containing 115 is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:36,650,384...36,654,348
Ensembl chr 9:36,649,271...36,653,946
JBrowse link
G Emc2 ER membrane protein complex subunit 2 located_in IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:32439656)
Ensembl
UniProt
RGD
PMID:32439656 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:74,587,196...74,624,163
Ensembl chr 7:74,587,175...74,625,189
JBrowse link
G Gba2 glucosylceramidase beta 2 located_in ISS
ISO
GO_REF:0000024
(MGI:5484792|PMID:23250757)
UniProt
RGD
PMID:23250757 GO_REF:0000024 MGI:5484792 NCBI chr 5:57,822,389...57,834,522
Ensembl chr 5:57,822,389...57,834,072
JBrowse link
G Mmp27 matrix metallopeptidase 27 located_in ISO (PMID:24548619) RGD PMID:24548619 NCBI chr 8:4,745,887...4,755,806
Ensembl chr 8:4,745,883...4,755,806
JBrowse link
G Otulinl OTU deubiquitinase with linear linkage specificity like located_in IEA
ISO
ISS
GO_REF:0000107
(PMID:31056421)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:31056421 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:78,405,994...78,433,860
Ensembl chr 2:78,408,593...78,433,838
JBrowse link
G Pml PML nuclear body scaffold located_in ISO (MGI:4849347|PMID:21030605) RGD PMID:21030605 MGI:4849347 NCBI chr 8:58,627,347...58,661,927
Ensembl chr 8:58,628,837...58,658,971
JBrowse link
G Tor1a torsin family 1, member A located_in ISS
ISO
GO_REF:0000024
(PMID:17037984)
UniProt
RGD
PMID:17037984 GO_REF:0000024 NCBI chr 3:14,250,667...14,257,704
Ensembl chr 3:14,250,676...14,257,691
JBrowse link
G Zc3h12a zinc finger CCCH type containing 12A located_in ISS
ISO
GO_REF:0000024
(MGI:5706859|PMID:26000482), (MGI:5751631|PMID:26255671)
UniProt
RGD
PMID:26000482 PMID:26255671 GO_REF:0000024 MGI:5706859 MGI:5751631 NCBI chr 5:137,376,562...137,385,351
Ensembl chr 5:137,376,564...137,385,351
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 19896
    cellular anatomical entity 19599
      extrinsic component of membrane 336
        extrinsic component of organelle membrane 67
          extrinsic component of endoplasmic reticulum membrane 9
Path 2
Term Annotations click to browse term
  cellular_component 19896
    cellular anatomical entity 19599
      intracellular anatomical structure 14287
        intracellular organelle 12666
          intracellular membrane-bounded organelle 11161
            endoplasmic reticulum 1756
              endoplasmic reticulum subcompartment 959
                endoplasmic reticulum membrane 949
                  extrinsic component of endoplasmic reticulum membrane 9
paths to the root