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ONTOLOGY REPORT - ANNOTATIONS


Term:histone binding
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Accession:GO:0042393 term browser browse the term
Definition:Binding to a histone, any of a group of water-soluble proteins found in association with the DNA of eukaroytic chromosomes. They are involved in the condensation and coiling of chromosomes during cell division and have also been implicated in nonspecific suppression of gene activity.
Synonyms:related_synonym: histone-specific chaperone activity



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histone binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07007744.2 enables IBA PMID:21873635 GO_Central PMID:21873635 PMID:21873635 RGD:13792537, RGD:13792537 Ensembl chr 2:27,601,232...27,601,825 JBrowse link
G AABR07025089.1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr16:26,091,905...26,186,434 JBrowse link
G AABR07031963.1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G AABR07041089.1 enables IBA PMID:21873635 GO_Central PMID:21873635 PMID:21873635 RGD:13792537, RGD:13792537 Ensembl chr  X:111,554,752...111,557,411 JBrowse link
G AABR07049223.1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G AABR07055527.1 enables IBA PMID:21873635 GO_Central PMID:21873635 PMID:21873635 RGD:13792537, RGD:13792537 Ensembl chr 7:4,352,572...4,353,409 JBrowse link
G AABR07058615.1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G AABR07068728.1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 9:108,329,669...108,747,774 JBrowse link
G AC112018.1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 4:144,220,751...144,220,990 JBrowse link
G Aire autoimmune regulator enables ISO
IBA
(PMID:18292755), (PMID:19446523)
PMID:21873635
RGD PMID:18292755 PMID:19446523 PMID:21873635 RGD:13792537 NCBI chr20:10,636,058...10,651,060
Ensembl chr20:10,636,123...10,651,060
JBrowse link
G Anp32a acidic nuclear phosphoprotein 32 family member A enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G Anp32b acidic nuclear phosphoprotein 32 family member B enables IEA
IBA
ISO
GO_REF:0000107
PMID:21873635
(PMID:20538007)
Ensembl
RGD
PMID:20538007 PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr 5:60,743,077...60,765,726
Ensembl chr 5:60,743,443...60,765,717
JBrowse link
G Anp32e acidic nuclear phosphoprotein 32 family member E enables ISS
IBA
ISO
GO_REF:0000024
PMID:21873635
(PMID:24463511)
UniProt
RGD
PMID:24463511 PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 2:183,472,600...183,489,057
Ensembl chr 2:183,472,609...183,489,054
JBrowse link
G Apbb1 amyloid beta precursor protein binding family B member 1 enables ISO UniProtKB:P16104 (PMID:19234442) RGD PMID:19234442 NCBI chr 1:159,896,889...159,920,505
Ensembl chr 1:159,896,880...159,920,627
JBrowse link
G Asf1a anti-silencing function 1A histone chaperone enables IBA
ISO
PMID:21873635
(PMID:10759893)
RGD PMID:10759893 PMID:21873635 RGD:13792537 NCBI chr20:32,893,962...32,908,808
Ensembl chr20:32,893,573...32,908,808
JBrowse link
G Asf1b anti-silencing function 1B histone chaperone enables IBA
ISO
PMID:21873635
(MGI:2675150|PMID:12842904)
RGD PMID:12842904 PMID:21873635 MGI:2675150, RGD:13792537 NCBI chr19:24,181,024...24,195,604
Ensembl chr19:24,181,028...24,195,549
JBrowse link
G Atad2 ATPase family, AAA domain containing 2 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:89,634,123...89,676,738
Ensembl chr 7:89,634,123...89,676,738
JBrowse link
G Atad2b ATPase family, AAA domain containing 2B enables IBA PMID:21873635 GO_Central PMID:21873635 PMID:21873635 RGD:13792537, RGD:13792537 NCBI chr 6:27,914,546...28,070,103
Ensembl chr 6:27,912,862...28,067,047
JBrowse link
G Atrx ATRX, chromatin remodeler enables ISO
ISS
(PMID:20211137), (PMID:22391447)
UniProtKB:P84243 (MGI:4454526|PMID:20110566), (MGI:4881400|PMID:20211137)
GO_REF:0000024
RGD
UniProt
PMID:20110566 PMID:20211137 PMID:22391447 GO_REF:0000024 MGI:4454526 MGI:4881400 NCBI chr  X:70,850,981...70,997,330
Ensembl chr  X:70,850,981...70,997,330
JBrowse link
G Baz1b bromodomain adjacent to zinc finger domain, 1B enables ISO UniProtKB:P27661 (MGI:3829305|PMID:19092802) RGD PMID:19092802 MGI:3829305 NCBI chr12:21,431,985...21,489,956
Ensembl chr12:21,431,985...21,490,426
JBrowse link
G Baz2a bromodomain adjacent to zinc finger domain, 2A enables ISO UniProtKB:P62805 (PMID:22368283) RGD PMID:22368283 NCBI chr 7:523,204...560,911
Ensembl chr 7:523,265...560,659
JBrowse link
G Bcas3 BCAS3, microtubule associated cell migration factor enables ISO (PMID:17505058) RGD PMID:17505058 NCBI chr10:70,213,710...70,673,080
Ensembl chr10:70,214,098...70,673,080
JBrowse link
G Brd1 bromodomain containing 1 enables ISO
IBA
(PMID:21880731)
PMID:21873635
RGD PMID:21880731 PMID:21873635 RGD:13792537 NCBI chr 7:119,774,187...119,822,031
Ensembl chr 7:119,774,188...119,822,031
JBrowse link
G Brd7 bromodomain containing 7 enables ISO (PMID:12489984) RGD PMID:12489984 NCBI chr19:18,708,792...18,737,500
Ensembl chr19:18,709,022...18,737,494
JBrowse link
G Brdt bromodomain testis associated enables ISO (PMID:22464331)
(MGI:2668282|PMID:12861021), (MGI:5430881|PMID:19794495)
RGD PMID:12861021 PMID:19794495 PMID:22464331 MGI:2668282 MGI:5430881 NCBI chr14:2,421,094...2,445,842
Ensembl chr14:2,387,796...2,445,842
JBrowse link
G Brpf1 bromodomain and PHD finger containing, 1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:146,456,344...146,472,781
Ensembl chr 4:146,456,318...146,472,649
JBrowse link
G Brpf3 bromodomain and PHD finger containing, 3 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr20:6,864,684...6,902,760
Ensembl chr20:6,865,985...6,902,690
JBrowse link
G Cd1d1 CD1d1 molecule enables ISO
IEA
UniProtKB:Q13547 (PMID:20363964)
GO_REF:0000107
RGD
Ensembl
PMID:20363964 GO_REF:0000107 NCBI chr 2:172,423,582...172,427,089
Ensembl chr 2:172,423,582...172,427,089
JBrowse link
G Chd2 chromodomain helicase DNA binding protein 2 enables ISO (MGI:5532896|PMID:22569126) RGD PMID:22569126 MGI:5532896 NCBI chr 1:127,188,146...127,317,041
Ensembl chr 1:127,190,059...127,300,502
JBrowse link
G Chd5 chromodomain helicase DNA binding protein 5 enables ISO (MGI:5559659|PMID:23318260) RGD PMID:23318260 MGI:5559659 NCBI chr 5:162,848,273...162,898,997
Ensembl chr 5:162,848,394...162,896,291
JBrowse link
G Chd8 chromodomain helicase DNA binding protein 8 enables ISS
ISO
GO_REF:0000024
PR:P15864 (MGI:3839031|PMID:19151705), (MGI:5319056|PMID:22083958)
UniProt
RGD
PMID:19151705 PMID:22083958 GO_REF:0000024 MGI:3839031 MGI:5319056 NCBI chr15:24,905,789...24,965,461
Ensembl chr15:24,905,789...24,951,285
JBrowse link
G Cks1b CDC28 protein kinase regulatory subunit 1B enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:174,833,025...174,837,614
Ensembl chr 2:174,833,050...174,837,636
JBrowse link
G Cks1l CDC28 protein kinase regulatory subunit 1-like enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:106,982,447...106,983,199
Ensembl chr 5:106,982,882...106,983,121
JBrowse link
G Cks2 CDC28 protein kinase regulatory subunit 2 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:13,570,611...13,575,770 JBrowse link
G Coprs coordinator of PRMT5 and differentiation stimulator enables IBA
ISO
PMID:21873635
(PMID:18404153)
RGD PMID:18404153 PMID:21873635 RGD:13792537 NCBI chr16:75,721,264...75,726,375
Ensembl chr16:75,720,061...75,726,375
JBrowse link
G Ctcfl CCCTC-binding factor like enables ISO (MGI:3692841|PMID:17048991) RGD PMID:17048991 MGI:3692841 NCBI chr 3:161,868,306...161,890,949
Ensembl chr 3:161,868,306...161,890,949
JBrowse link
G Ctsl cathepsin L enables ISO (PMID:21326229)
(MGI:5009377|PMID:18957203)
RGD PMID:18957203 PMID:21326229 MGI:5009377 NCBI chr17:764,370...770,533
Ensembl chr17:764,309...770,548
JBrowse link
G Daxx death-domain associated protein enables ISO
IEA
IBA
(PMID:12140263), (PMID:20211137), (PMID:20504901)
GO_REF:0000107
(MGI:4457804|PMID:20504901), (MGI:4881400|PMID:20211137)
PMID:21873635
RGD
Ensembl
PMID:12140263 PMID:20211137 PMID:20504901 PMID:21873635 GO_REF:0000107 MGI:4457804 MGI:4881400, RGD:13792537 NCBI chr20:4,970,090...4,976,145
Ensembl chr20:4,970,092...4,975,843
JBrowse link
G Dek DEK proto-oncogene enables ISO
IBA
(PMID:12140263)
PMID:21873635
RGD PMID:12140263 PMID:21873635 RGD:13792537 NCBI chr17:17,580,804...17,602,825
Ensembl chr17:17,580,843...17,602,808
JBrowse link
G Dnajc2 DnaJ heat shock protein family (Hsp40) member C2 enables ISO
ISS
(PMID:21179169)
GO_REF:0000024
RGD
UniProt
PMID:21179169 GO_REF:0000024 NCBI chr 4:13,270,239...13,297,438
Ensembl chr 4:13,270,191...13,297,431
JBrowse link
G Dnajc9 DnaJ heat shock protein family (Hsp40) member C9 enables ISO
IEA
(PMID:33857403)
GO_REF:0000107
RGD
Ensembl
PMID:33857403 GO_REF:0000107 NCBI chr15:3,923,842...3,928,118
Ensembl chr15:3,923,268...3,928,118
JBrowse link
G Dpf1 double PHD fingers 1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:84,602,212...84,615,954
Ensembl chr 1:84,602,336...84,615,950
JBrowse link
G Dpf2 double PHD fingers 2 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:203,183,674...203,199,037
Ensembl chr 1:203,183,686...203,198,983
JBrowse link
G Dpf3 double PHD fingers 3 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:102,841,403...103,125,558
Ensembl chr 6:102,846,029...103,125,493
JBrowse link
G Dtx3l deltex E3 ubiquitin ligase 3L enables ISO UniProtKB:Q93079 (PMID:19818714), (PMID:26479788) RGD PMID:19818714 PMID:26479788 NCBI chr11:64,814,926...64,824,538
Ensembl chr11:64,814,926...64,824,538
JBrowse link
G Fh fumarate hydratase enables ISO UniProtKB:P0C0S5 (PMID:26237645) RGD PMID:26237645 NCBI chr13:87,524,331...87,550,215
Ensembl chr13:87,524,337...87,550,266
JBrowse link
G Gk glycerol kinase IDA RGD PMID:2912694 RGD:2302223 NCBI chr  X:50,162,089...50,238,707
Ensembl chr  X:50,163,123...50,238,631
JBrowse link
G Glyr1 glyoxylate reductase 1 homolog enables ISO
ISS
(PMID:23260659)
GO_REF:0000024
RGD
UniProt
PMID:23260659 GO_REF:0000024 NCBI chr10:10,532,036...10,567,639
Ensembl chr10:10,532,154...10,567,637
JBrowse link
G Grwd1 glutamate-rich WD repeat containing 1 enables ISO
IEA
ISS
(PMID:25990725)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:25990725 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:96,301,260...96,306,962
Ensembl chr 1:96,301,261...96,307,201
JBrowse link
G H2ax H2A.X variant histone enables ISO UniProtKB:O00213 (PMID:19234442) RGD PMID:19234442 NCBI chr 8:44,671,927...44,673,257
Ensembl chr 8:44,671,786...44,673,239
JBrowse link
G H2bc1 H2B clustered histone 1 enables ISO PR:Q9CQ70|UniProtKB:Q9CQ70 (MGI:3702345|PMID:17261847), (MGI:5897488|PMID:28366643) RGD PMID:17261847 PMID:28366643 MGI:3702345 MGI:5897488 NCBI chr17:41,172,041...41,172,510 JBrowse link
G Hat1 histone acetyltransferase 1 enables IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 3:56,217,344...56,265,021
Ensembl chr 3:56,217,342...56,275,517
JBrowse link
G Hils1 histone linker H1 domain, spermatid-specific 1 enables ISO (PMID:12920187) RGD PMID:12920187 NCBI chr10:79,913,525...79,914,321
Ensembl chr10:79,913,480...79,914,321
JBrowse link
G Hinfp histone H4 transcription factor enables ISO UniProtKB:P62805 (PMID:14585971), (PMID:9540062) RGD PMID:9540062 PMID:14585971 NCBI chr 8:44,634,333...44,644,288
Ensembl chr 8:44,634,333...44,641,000
JBrowse link
G Hira histone cell cycle regulator enables ISO (PMID:9731536) RGD PMID:9731536 NCBI chr11:82,024,469...82,133,212
Ensembl chr11:82,024,469...82,133,529
JBrowse link
G Hjurp Holliday junction recognition protein enables ISO
IBA
UniProtKB:P49450 (PMID:19410544), (PMID:19410545), (PMID:21478274)
PMID:21873635
RGD PMID:19410544 PMID:19410545 PMID:21478274 PMID:21873635 RGD:13792537 NCBI chr 9:88,853,379...88,867,730
Ensembl chr 9:88,853,386...88,867,728
JBrowse link
G Hpf1 histone PARylation factor 1 enables IBA
ISO
PMID:21873635
(PMID:27067600)
RGD PMID:27067600 PMID:21873635 RGD:13792537 NCBI chr16:29,203,749...29,219,651
Ensembl chr16:29,183,256...29,219,716
JBrowse link
G Ino80 INO80 complex ATPase subunit enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:106,368,455...106,465,716
Ensembl chr 3:106,368,455...106,467,911
JBrowse link
G Ipo7 importin 7 enables ISO (MGI:2183182|PMID:11493596) RGD PMID:11493596 MGI:2183182 NCBI chr 1:164,062,702...164,102,938
Ensembl chr 1:164,062,702...164,102,938
JBrowse link
G Ipo9 importin 9 enables ISO (MGI:2183182|PMID:11493596) RGD PMID:11493596 MGI:2183182 NCBI chr13:46,810,460...46,862,694
Ensembl chr13:46,813,171...46,862,673
JBrowse link
G Jak2 Janus kinase 2 enables ISO
ISS
(PMID:19783980)
GO_REF:0000024
RGD
UniProt
PMID:19783980 GO_REF:0000024 NCBI chr 1:226,995,334...227,054,381
Ensembl chr 1:226,995,334...227,054,189
JBrowse link
G Kat5 lysine acetyltransferase 5 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:202,895,751...202,903,178
Ensembl chr 1:202,895,751...202,903,458
JBrowse link
G Kat6a lysine acetyltransferase 6A enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:69,084,914...69,165,923
Ensembl chr16:69,084,914...69,163,606
JBrowse link
G Kat6b lysine acetyltransferase 6B enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr15:2,638,885...2,811,977
Ensembl chr15:2,639,200...2,812,316
JBrowse link
G Kat7 lysine acetyltransferase 7 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:80,221,519...80,255,590
Ensembl chr10:80,221,524...80,255,567
JBrowse link
G Kat8 lysine acetyltransferase 8 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:182,524,355...182,536,638 JBrowse link
G Kdm1b lysine demethylase 1B enables ISO (PMID:23260659) RGD PMID:23260659 NCBI chr17:17,602,961...17,643,865
Ensembl chr17:17,602,961...17,643,800
JBrowse link
G Kdm5a lysine demethylase 5A enables ISO (PMID:19430464) RGD PMID:19430464 NCBI chr 4:153,565,909...153,643,912
Ensembl chr 4:153,565,846...153,642,422
JBrowse link
G Kdm5b lysine demethylase 5B enables ISO (PMID:24952722) RGD PMID:24952722 NCBI chr13:46,001,589...46,073,868
Ensembl chr13:46,002,542...46,073,872
JBrowse link
G Kmt2c lysine methyltransferase 2C enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:9,620,638...9,834,787
Ensembl chr 4:9,609,627...9,833,539
JBrowse link
G Kmt5c lysine methyltransferase 5C enables ISO (MGI:5575440|PMID:24049080) RGD PMID:24049080 MGI:5575440 NCBI chr 1:69,099,531...69,107,145
Ensembl chr 1:69,099,539...69,107,145
JBrowse link
G L3mbtl1 L3MBTL histone methyl-lysine binding protein 1 enables ISO
IBA
UniProtKB:P06400|UniProtKB:P62805 (PMID:17540172), (PMID:18474616)
PMID:21873635
RGD PMID:17540172 PMID:18474616 PMID:21873635 RGD:13792537 NCBI chr 3:151,597,903...151,633,657
Ensembl chr 3:151,602,980...151,631,233
JBrowse link
G L3mbtl2 L3MBTL histone methyl-lysine binding protein 2 enables IBA
ISO
PMID:21873635
UniProtKB:P06400|UniProtKB:Q13185 (PMID:17540172)
RGD PMID:17540172 PMID:21873635 RGD:13792537 NCBI chr 7:113,186,303...113,209,706
Ensembl chr 7:113,186,370...113,207,489
JBrowse link
G L3mbtl3 L3MBTL histone methyl-lysine binding protein 3 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:18,988,763...19,089,247
Ensembl chr 1:18,990,618...19,089,263
JBrowse link
G Lef1 lymphoid enhancer binding factor 1 enables ISO
IEA
UniProtKB:Q13547 (PMID:20363964)
GO_REF:0000107
RGD
Ensembl
PMID:20363964 GO_REF:0000107 NCBI chr 2:219,666,549...219,779,815
Ensembl chr 2:219,666,592...219,779,794
JBrowse link
G LOC499544 LRRGT00154 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:60,977,315...61,004,442
Ensembl chr 2:60,977,315...61,004,442
JBrowse link
G LOC499843 LRRGT00091 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:87,462,365...87,492,138
Ensembl chr 3:87,462,365...87,492,138
JBrowse link
G LOC500948 LRRGT00073 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:14,286,270...14,309,443
Ensembl chr 8:14,286,270...14,309,443
JBrowse link
G Mbtd1 mbt domain containing 1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:78,839,140...78,895,413
Ensembl chr10:78,839,036...78,893,720
JBrowse link
G Mcm2 minichromosome maintenance complex component 2 enables ISO (MGI:2156014|PMID:10531422) RGD PMID:10531422 MGI:2156014 NCBI chr 4:121,346,434...121,360,962
Ensembl chr 4:121,346,434...121,360,847
JBrowse link
G Mcm3ap minichromosome maintenance complex component 3 associated protein enables ISO (PMID:23652018) RGD PMID:23652018 NCBI chr20:12,127,570...12,165,165
Ensembl chr20:12,127,570...12,165,165
JBrowse link
G Mllt10 MLLT10, histone lysine methyltransferase DOT1L cofactor enables ISO
IBA
UniProtKB:P84243 (PMID:26439302)
PMID:21873635
RGD PMID:26439302 PMID:21873635 RGD:13792537 NCBI chr17:80,821,870...80,949,349
Ensembl chr17:80,822,556...80,949,345
JBrowse link
G Mllt3 MLLT3, super elongation complex subunit enables ISO (PMID:27105114), (PMID:27545619) RGD PMID:27105114 PMID:27545619 NCBI chr 5:102,259,075...102,515,447
Ensembl chr 5:102,260,011...102,515,361
JBrowse link
G Mllt6 MLLT6, PHD finger containing enables ISO
IBA
UniProtKB:P84243 (PMID:26439302)
PMID:21873635
RGD PMID:26439302 PMID:21873635 RGD:13792537 NCBI chr10:82,657,258...82,678,899
Ensembl chr10:82,656,872...82,676,073
JBrowse link
G Morc2 MORC family CW-type zinc finger 2 enables ISO (MGI:6271895|PMID:29728365) RGD PMID:29728365 MGI:6271895 NCBI chr14:78,529,603...78,571,375
Ensembl chr14:78,527,009...78,571,343
JBrowse link
G Mpnd MPN domain containing enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:839,473...846,446
Ensembl chr 9:840,143...846,439
JBrowse link
G Mysm1 myb-like, SWIRM and MPN domains 1 enables ISO
IBA
(PMID:17707232)
PMID:21873635
RGD PMID:17707232 PMID:21873635 RGD:13792537 NCBI chr 5:109,761,345...109,826,652
Ensembl chr 5:109,776,286...109,819,967
JBrowse link
G Nap1l1 nucleosome assembly protein 1-like 1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:46,933,278...46,957,853
Ensembl chr 7:46,933,356...46,956,593
JBrowse link
G Nap1l2 nucleosome assembly protein 1-like 2 enables ISO (MGI:3723398|PMID:17591696) RGD PMID:17591696 MGI:3723398 NCBI chr  X:68,174,051...68,176,449
Ensembl chr  X:68,173,987...68,176,666
JBrowse link
G Nap1l3 nucleosome assembly protein 1-like 3 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:88,347,595...88,350,393
Ensembl chr  X:88,347,598...88,350,393
JBrowse link
G Nap1l4 nucleosome assembly protein 1-like 4 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:198,709,697...198,746,093
Ensembl chr 1:198,709,701...198,746,020
JBrowse link
G Nap1l5 nucleosome assembly protein 1-like 5 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:88,022,670...88,024,988
Ensembl chr 4:88,022,569...88,024,654
JBrowse link
G Nasp nuclear autoantigenic sperm protein enables ISS
IBA
ISO
GO_REF:0000024
PMID:21873635
(MGI:1889922|PMID:10893414), (MGI:3693383|PMID:12509435)
(PMID:27618665)
UniProt
RGD
PMID:10893414 PMID:12509435 PMID:27618665 PMID:21873635 GO_REF:0000024 MGI:1889922 MGI:3693383, RGD:13792537 NCBI chr 5:130,057,363...130,083,003
Ensembl chr 5:130,057,363...130,082,928
JBrowse link
G Ncapd2 non-SMC condensin I complex, subunit D2 enables ISO
IBA
(PMID:12138188)
PMID:21873635
RGD PMID:12138188 PMID:21873635 RGD:13792537 NCBI chr 4:157,968,814...157,992,314
Ensembl chr 4:157,968,815...157,992,020
JBrowse link
G Ncapd3 non-SMC condensin II complex, subunit D3 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:25,437,067...25,506,375
Ensembl chr 8:25,437,123...25,506,373
JBrowse link
G Ncl nucleolin IDA RGD PMID:8424749 RGD:9686387 NCBI chr 9:86,999,588...87,008,112
Ensembl chr 9:86,998,019...87,008,136
JBrowse link
G Noc2l NOC2-like nucleolar associated transcriptional repressor enables IBA
ISO
PMID:21873635
(PMID:16322561)
RGD PMID:16322561 PMID:21873635 RGD:13792537 NCBI chr 5:166,820,075...166,831,951
Ensembl chr 5:166,820,161...166,831,949
JBrowse link
G Npm1 nucleophosmin 1 enables ISO
IBA
(PMID:11602260)
PMID:21873635
RGD PMID:11602260 PMID:21873635 PMID:21873635 RGD:13792537, RGD:13792537 NCBI chr10:17,741,512...17,751,626
Ensembl chr10:17,739,941...17,751,645
JBrowse link
G Npm2 nucleophosmin/nucleoplasmin 2 enables IBA PMID:21873635 GO_Central PMID:21873635 PMID:21873635 RGD:13792537, RGD:13792537 NCBI chr15:45,722,494...45,729,246
Ensembl chr15:45,722,400...45,729,726
JBrowse link
G Npm3 nucleophosmin/nucleoplasmin, 3 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:244,595,638...244,597,623
Ensembl chr 1:244,595,644...244,597,591
JBrowse link
G Parp9 poly (ADP-ribose) polymerase family, member 9 enables ISO UniProtKB:Q93079 (PMID:26479788) RGD PMID:26479788 NCBI chr11:64,780,977...64,814,995
Ensembl chr11:64,780,981...64,815,455
JBrowse link
G Phc1 polyhomeotic homolog 1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:155,510,274...155,532,636
Ensembl chr 4:155,510,274...155,533,959
JBrowse link
G Phc2 polyhomeotic homolog 2 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:141,000,604...141,099,268
Ensembl chr 5:141,050,842...141,099,268
JBrowse link
G Phc3 polyhomeotic homolog 3 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:112,408,709...112,483,719
Ensembl chr 2:112,408,531...112,476,540
JBrowse link
G Phf10 PHD finger protein 10 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:55,952,249...55,968,994
Ensembl chr 1:55,952,253...55,969,038
JBrowse link
G Phf14 PHD finger protein 14 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:40,009,691...40,195,870
Ensembl chr 4:40,009,264...40,195,885
JBrowse link
G Phf6 PHD finger protein 6 enables IBA
ISO
PMID:21873635
UniProtKB:P0C0S5|UniProtKB:P16403|UniProtKB:P33778|UniProtKB:P68431 (PMID:22720776)
RGD PMID:22720776 PMID:21873635 RGD:13792537 NCBI chr  X:132,656,658...132,699,720
Ensembl chr  X:132,656,672...132,699,127
JBrowse link
G Pih1d1 PIH1 domain containing 1 enables ISO UniProtKB:P62805 (PMID:22368283) RGD PMID:22368283 NCBI chr 1:95,639,597...95,645,295
Ensembl chr 1:95,639,592...95,645,290
JBrowse link
G Pkn1 protein kinase N1 enables ISS
ISO
GO_REF:0000024
(PMID:18066052)
UniProt
RGD
PMID:18066052 GO_REF:0000024 NCBI chr19:24,442,130...24,470,107
Ensembl chr19:24,442,122...24,470,107
JBrowse link
G Prkcb protein kinase C, beta enables ISO
IEA
ISS
(PMID:20228790)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:20228790 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:176,832,173...177,163,539
Ensembl chr 1:176,832,226...177,163,536
JBrowse link
G Prmt6 protein arginine methyltransferase 6 enables ISO (PMID:17898714), (PMID:18079182) RGD PMID:17898714 PMID:18079182 NCBI chr 2:197,927,750...197,932,980
Ensembl chr 2:197,927,220...197,933,648
JBrowse link
G Ptma prothymosin alpha enables ISO (MGI:4457993|PMID:20434447) RGD PMID:20434447 MGI:4457993 NCBI chr 9:87,176,251...87,180,333
Ensembl chr 9:87,176,230...87,180,333
JBrowse link
G Pwwp2a PWWP domain containing 2A enables ISO UniProtKB:P0C0S5 (PMID:28645917) RGD PMID:28645917 NCBI chr10:28,155,509...28,195,255
Ensembl chr10:28,155,605...28,194,308
JBrowse link
G Pygo2 pygopus family PHD finger 2 enables ISO MGI:5518423 (MGI:4821247|PMID:19487454), (MGI:5498404|PMID:23637336) RGD PMID:19487454 PMID:23637336 MGI:4821247 MGI:5498404 NCBI chr 2:174,849,670...174,854,758
Ensembl chr 2:174,849,936...174,854,758
JBrowse link
G Rag1 recombination activating 1 enables ISO (MGI:4441018|PMID:20122409) RGD PMID:20122409 MGI:4441018 NCBI chr 3:87,917,061...87,928,158
Ensembl chr 3:87,917,004...87,928,291
JBrowse link
G Rbbp4 RB binding protein 4, chromatin remodeling factor enables ISO (PMID:9651585) RGD PMID:9651585 NCBI chr 5:141,655,863...141,675,157
Ensembl chr 5:141,638,421...141,675,284
JBrowse link
G Rbbp7 RB binding protein 7, chromatin remodeling factor enables ISO (PMID:9651585) RGD PMID:9651585 NCBI chr  X:31,913,080...31,931,245
Ensembl chr  X:31,913,081...31,931,226
JBrowse link
G Rcc1 regulator of chromosome condensation 1 enables ISO (PMID:11375490) RGD PMID:11375490 NCBI chr 5:144,526,025...144,544,445
Ensembl chr 5:144,526,025...144,544,577
JBrowse link
G RGD1560617 hypothetical gene supported by NM_053561; AF062594 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:118,084,674...118,085,850
Ensembl chr 7:118,084,696...118,085,850
JBrowse link
G RGD1563307 similar to Set beta isoform enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:86,449,036...86,453,703
Ensembl chr  X:119,908,942...119,909,886
JBrowse link
G RGD1563620 similar to retinoblastoma binding protein 4 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:153,958,955...153,961,336
Ensembl chr 2:153,958,955...153,960,757
JBrowse link
G Rnf168 ring finger protein 168 enables ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000104
(PMID:19203578), (PMID:19203579), (PMID:23760478)
UniProt
RGD
PMID:19203578 PMID:19203579 PMID:23760478 GO_REF:0000024 GO_REF:0000104 NCBI chr11:68,486,313...68,508,296
Ensembl chr11:68,486,321...68,508,277
JBrowse link
G Rnf20 ring finger protein 20 enables ISO (PMID:16337599) RGD PMID:16337599 NCBI chr 5:63,976,063...64,001,754
Ensembl chr 5:63,976,045...64,001,754
JBrowse link
G Rnf8 ring finger protein 8 enables ISS
ISO
IEA
IBA
GO_REF:0000024
(MGI:3835231|PMID:19015238)
GO_REF:0000104
PMID:21873635
(PMID:18001824), (PMID:18001825)
UniProt
RGD
PMID:18001824 PMID:18001825 PMID:19015238 PMID:21873635 GO_REF:0000024 GO_REF:0000104 MGI:3835231, RGD:13792537 NCBI chr20:7,682,258...7,710,448
Ensembl chr20:7,682,322...7,708,491
JBrowse link
G Rsf1 remodeling and spacing factor 1 enables IBA
ISO
PMID:21873635
(PMID:12972596)
RGD PMID:12972596 PMID:21873635 RGD:13792537 NCBI chr 1:151,892,055...152,015,089
Ensembl chr 1:151,892,434...152,009,051
JBrowse link
G Samd1 sterile alpha motif domain containing 1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr19:24,151,136...24,154,475 JBrowse link
G Samd11 sterile alpha motif domain containing 11 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:166,831,663...166,859,805
Ensembl chr 5:166,831,663...166,850,009
JBrowse link
G Samd7 sterile alpha motif domain containing 7 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:112,624,942...112,639,549
Ensembl chr 2:112,624,942...112,639,549
JBrowse link
G Sap30l SAP30-like enables ISO (PMID:19015240) RGD PMID:19015240 NCBI chr10:41,980,151...41,992,307
Ensembl chr10:41,979,687...41,987,658
JBrowse link
G Sart3 spliceosome associated factor 3, U4/U6 recycling protein enables ISO (PMID:24526689) RGD PMID:24526689 NCBI chr12:42,859,026...42,887,041
Ensembl chr12:42,859,305...42,887,038
JBrowse link
G Sbno1 strawberry notch homolog 1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr12:32,175,176...32,234,200
Ensembl chr12:32,185,485...32,230,158
JBrowse link
G Sbno2 strawberry notch homolog 2 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:9,605,572...9,649,529
Ensembl chr 7:9,605,627...9,649,527
JBrowse link
G Scmh1 Scm polycomb group protein homolog 1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:133,991,167...134,115,893
Ensembl chr 5:133,990,520...134,122,105
JBrowse link
G Scml2 Scm polycomb group protein like 2 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:33,523,179...33,677,672
Ensembl chr  X:33,524,530...33,652,742
JBrowse link
G Scml4 Scm polycomb group protein like 4 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr20:46,347,242...46,440,103
Ensembl chr20:46,347,413...46,440,103
JBrowse link
G Set SET nuclear proto-oncogene enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr19:53,561,262...53,562,780
Ensembl chr19:53,561,190...53,563,819
JBrowse link
G Sfmbt1 Scm-like with four mbt domains 1 enables ISO
ISS
IBA
(PMID:17599839), (PMID:23592795)
GO_REF:0000024
PMID:21873635
RGD
UniProt
PMID:17599839 PMID:23592795 PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr16:5,889,046...6,009,860
Ensembl chr16:5,890,782...6,006,605
JBrowse link
G Sfmbt2 Scm-like with four mbt domains 2 enables ISO
IBA
(PMID:23385818)
PMID:21873635
RGD PMID:23385818 PMID:21873635 RGD:13792537 NCBI chr17:67,934,296...68,128,905
Ensembl chr17:67,935,904...68,128,781
JBrowse link
G Sirt1 sirtuin 1 enables ISO
IEA
UniProtKB:P10412|UniProtKB:P16401 (PMID:15469825), (PMID:22956909)
GO_REF:0000107
RGD
Ensembl
PMID:15469825 PMID:22956909 GO_REF:0000107 NCBI chr20:25,307,143...25,329,260
Ensembl chr20:25,306,917...25,329,260
JBrowse link
G Smarca2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 enables IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 1:224,191,125...224,358,640
Ensembl chr 1:224,191,125...224,358,684
JBrowse link
G Smarca5 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 contributes_to ISO (PMID:12972596) RGD PMID:12972596 NCBI chr19:27,271,918...27,304,594
Ensembl chr19:27,271,148...27,304,594
JBrowse link
G Smarcc1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:110,111,097...110,214,727
Ensembl chr 8:110,111,122...110,214,720
JBrowse link
G Smarcc2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:881,844...910,090
Ensembl chr 7:881,421...909,978
JBrowse link
G Snca synuclein alpha enables ISO (PMID:16959795)
(MGI:4399019|PMID:16959795)
RGD PMID:16959795 MGI:4399019 NCBI chr 4:89,696,420...89,797,240
Ensembl chr 4:89,696,420...89,796,262
JBrowse link
G Spty2d1 SPT2 chromatin protein domain containing 1 enables ISO
IBA
(PMID:23378026)
PMID:21873635
RGD PMID:23378026 PMID:21873635 RGD:13792537 NCBI chr 1:97,531,495...97,549,633 JBrowse link
G Srcap Snf2-related CREBBP activator protein enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:182,123,562...182,172,643
Ensembl chr 1:182,118,416...182,176,610
JBrowse link
G Ssrp1 structure specific recognition protein 1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:70,124,371...70,134,481
Ensembl chr 3:70,118,655...70,134,482
JBrowse link
G Stat1 signal transducer and activator of transcription 1 enables ISO UniProtKB:Q93079 (PMID:26479788) RGD PMID:26479788 NCBI chr 9:49,419,561...49,459,969 JBrowse link
G Stpg4 sperm-tail PG-rich repeat containing 4 enables IBA
ISO
PMID:21873635
(MGI:5762940|PMID:23560077)
RGD PMID:23560077 PMID:21873635 MGI:5762940, RGD:13792537 NCBI chr 6:7,108,827...7,158,519
Ensembl chr 6:7,108,869...7,151,390
JBrowse link
G Supt6h SPT6 homolog, histone chaperone and transcription elongation factor enables IBA
ISO
PMID:21873635
(PMID:10933715)
RGD PMID:10933715 PMID:21873635 RGD:13792537 NCBI chr10:63,103,920...63,140,780
Ensembl chr10:63,103,921...63,140,780
JBrowse link
G Tbl1x transducin (beta)-like 1 X-linked enables ISO (PMID:15601853) RGD PMID:15601853 NCBI chr  X:41,574,558...41,731,117
Ensembl chr  X:41,576,047...41,731,101
JBrowse link
G Tbl1xr1 TBL1X receptor 1 enables ISO (PMID:15601853) RGD PMID:15601853 NCBI chr 2:104,788,950...104,929,055
Ensembl chr 2:104,801,721...104,929,055
JBrowse link
G Tnks tankyrase enables ISO UniProtKB:O75367 (PMID:26373281) RGD PMID:26373281 NCBI chr16:57,223,174...57,370,740
Ensembl chr16:57,225,094...57,366,260
JBrowse link
G Tonsl tonsoku-like, DNA repair protein enables ISS
ISO
GO_REF:0000024
(PMID:21055983), (PMID:21055984)
UniProt
RGD
PMID:21055983 PMID:21055984 GO_REF:0000024 NCBI chr 7:108,345,704...108,360,792
Ensembl chr 7:108,346,047...108,360,750
JBrowse link
G Tp53bp1 tumor protein p53 binding protein 1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:108,166,574...108,270,229
Ensembl chr 3:108,169,980...108,269,822
JBrowse link
G Tspy1 testis specific protein, Y-linked 1 enables IDA
IBA
PMID:21873635 RGD
GO_Central
PMID:16996029 PMID:21873635 RGD:2315448, RGD:13792537
G Tspy26 testis specific protein, Y-linked 26 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:141,690,653...141,692,729
Ensembl chr 3:141,689,899...141,692,670
JBrowse link
G Tspyl1 TSPY-like 1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr20:38,082,003...38,084,562
Ensembl chr20:38,081,951...38,084,554
Ensembl chr20:38,081,951...38,084,554
JBrowse link
G Tspyl2 TSPY-like 2 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:21,439,478...21,445,208
Ensembl chr  X:21,439,478...21,445,089
JBrowse link
G Tspyl4 TSPY-like 4 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr20:38,098,756...38,100,752
Ensembl chr20:38,098,677...38,103,053
JBrowse link
G Tspyl5 TSPY-like 5 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:64,881,092...64,885,538
Ensembl chr 7:64,884,225...64,885,457
JBrowse link
G Uhrf1 ubiquitin-like with PHD and ring finger domains 1 enables ISO
ISS
(PMID:21777816)
GO_REF:0000024
RGD
UniProt
PMID:21777816 GO_REF:0000024 NCBI chr 9:1,133,117...1,154,639
Ensembl chr 9:1,134,909...1,154,631
JBrowse link
G Uhrf2 ubiquitin like with PHD and ring finger domains 2 enables ISO (MGI:5318002|PMID:21598301) RGD PMID:21598301 MGI:5318002 NCBI chr 1:227,814,639...227,877,907
Ensembl chr 1:227,814,963...227,877,904
JBrowse link
G Uimc1 ubiquitin interaction motif containing 1 enables IBA
IEA
ISO
ISS
PMID:21873635
GO_REF:0000107
(PMID:17525341), (PMID:17525342)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:17525341 PMID:17525342 PMID:21873635 GO_REF:0000024 GO_REF:0000107, RGD:13792537 NCBI chr17:9,523,793...9,592,810
Ensembl chr17:9,527,794...9,592,799
JBrowse link
G Usp16 ubiquitin specific peptidase 16 enables ISS
ISO
GO_REF:0000024
(PMID:17914355)
UniProt
RGD
PMID:17914355 GO_REF:0000024 NCBI chr11:26,681,359...26,711,313
Ensembl chr11:26,681,414...26,710,539
JBrowse link
G Usp3 ubiquitin specific peptidase 3 enables ISO UniProtKB:P0C0S8 (PMID:17980597) RGD PMID:17980597 NCBI chr 8:67,078,249...67,154,109
Ensembl chr 8:67,079,927...67,154,111
JBrowse link
G Usp49 ubiquitin specific peptidase 49 enables ISO (PMID:23824326) RGD PMID:23824326 NCBI chr 9:13,305,640...13,366,132
Ensembl chr 9:13,308,178...13,366,132
JBrowse link
G Usp51 ubiquitin specific peptidase 51 enables ISO (PMID:27083998) RGD PMID:27083998 NCBI chr  X:18,374,940...18,381,472
Ensembl chr  X:18,376,930...18,379,888
JBrowse link
G Vps72 vacuolar protein sorting 72 homolog enables ISO UniProtKB:P06899|UniProtKB:P0C0S5 (PMID:26974126) RGD PMID:26974126 NCBI chr 2:182,678,594...182,690,185
Ensembl chr 2:182,678,609...182,690,182
JBrowse link
G Wdr5 WD repeat domain 5 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:10,836,964...10,856,682
Ensembl chr 3:10,837,025...10,856,671
JBrowse link
G Wdr5b WD repeat domain 5B enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr11:64,710,945...64,712,804
Ensembl chr11:64,710,355...64,712,807
JBrowse link
G Wdtc1 WD and tetratricopeptide repeats 1 enables ISO PR:Q64524 (MGI:3770497|PMID:17767906) RGD PMID:17767906 MGI:3770497 NCBI chr 5:145,491,461...145,559,631
Ensembl chr 5:145,491,466...145,540,408
JBrowse link
G Wrap53 WD repeat containing, antisense to TP53 enables ISO UniProtKB:P16104 (PMID:26734725), (PMID:27715493) RGD PMID:26734725 PMID:27715493 NCBI chr10:54,282,092...54,299,908
Ensembl chr10:54,282,105...54,298,929
JBrowse link
G Yeats2 YEATS domain containing 2 enables ISO (PMID:27103431) RGD PMID:27103431 NCBI chr11:80,743,134...80,829,253
Ensembl chr11:80,743,134...80,829,208
JBrowse link
G Zmynd11 zinc finger, MYND-type containing 11 enables ISO UniProtKB:P84243 (MGI:5560379|PMID:24590075) RGD PMID:24590075 MGI:5560379 NCBI chr17:60,542,669...60,631,913
Ensembl chr17:60,543,077...60,631,902
JBrowse link
H3K27me3 modified histone binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chd5 chromodomain helicase DNA binding protein 5 enables ISS
ISO
IEA
GO_REF:0000024
(MGI:5532595|PMID:23948251)
GO_REF:0000107
(PMID:23948251)
UniProt
RGD
Ensembl
PMID:23948251 GO_REF:0000024 GO_REF:0000107 MGI:5532595 NCBI chr 5:162,848,273...162,898,997
Ensembl chr 5:162,848,394...162,896,291
JBrowse link
G Hdgfl2 HDGF like 2 enables ISO
ISS
(PMID:26721387)
GO_REF:0000024
RGD
UniProt
PMID:26721387 GO_REF:0000024 NCBI chr 9:909,581...929,195
Ensembl chr 9:909,614...929,186
JBrowse link
G Taf1 TATA-box binding protein associated factor 1 contributes_to ISO UniProtKB:Q15545 (PMID:24927529) RGD PMID:24927529 NCBI chr  X:66,640,915...66,716,543
Ensembl chr  X:66,640,982...66,716,543
JBrowse link
G Taf7 TATA-box binding protein associated factor 7 contributes_to ISO UniProtKB:P21675 (PMID:24927529) RGD PMID:24927529 NCBI chr18:29,459,937...29,462,086
Ensembl chr18:29,452,943...29,462,134
JBrowse link
H3K9me3 modified histone binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dpf2 double PHD fingers 2 enables ISO (PMID:29429572) RGD PMID:29429572 NCBI chr 1:203,183,674...203,199,037
Ensembl chr 1:203,183,686...203,198,983
JBrowse link
G Hdgfl2 HDGF like 2 enables ISO (PMID:26721387) RGD PMID:26721387 NCBI chr 9:909,581...929,195
Ensembl chr 9:909,614...929,186
JBrowse link
H4K20me3 modified histone binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pwp1 PWP1 homolog, endonuclein enables ISO (MGI:5659778|PMID:25335925) RGD PMID:25335925 MGI:5659778 NCBI chr 7:17,982,730...17,998,728
Ensembl chr 7:17,982,235...17,998,731
JBrowse link
G Ttll12 tubulin tyrosine ligase like 12 enables ISO (PMID:23251473) RGD PMID:23251473 NCBI chr 7:114,731,890...114,751,237
Ensembl chr 7:114,731,892...114,751,356
JBrowse link
lysine-acetylated histone binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atad2b ATPase family, AAA domain containing 2B enables ISO (PMID:22464331) RGD PMID:22464331 NCBI chr 6:27,914,546...28,070,103
Ensembl chr 6:27,912,862...28,067,047
JBrowse link
G Baz2a bromodomain adjacent to zinc finger domain, 2A enables ISO (MGI:3587127|PMID:16085498), (MGI:3852588|PMID:19578370) RGD PMID:16085498 PMID:19578370 MGI:3587127 MGI:3852588 NCBI chr 7:523,204...560,911
Ensembl chr 7:523,265...560,659
JBrowse link
G Brd2 bromodomain containing 2 enables ISS
IBA
ISO
GO_REF:0000024
PMID:21873635
(PMID:18406326)
UniProt
RGD
PMID:18406326 PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr20:4,727,078...4,735,389
Ensembl chr20:4,728,151...4,735,388
JBrowse link
G Brd3 bromodomain containing 3 enables ISO
IBA
(PMID:22464331), (PMID:27105114)
PMID:21873635
RGD PMID:22464331 PMID:27105114 PMID:21873635 RGD:13792537 NCBI chr 3:10,773,163...10,829,675
Ensembl chr 3:10,775,272...10,829,577
JBrowse link
G Brd4 bromodomain containing 4 enables ISO
IBA
(PMID:23728299)
PMID:21873635
(PMID:20871596), (PMID:23086925), (PMID:23317504), (PMID:29176719)
RGD PMID:20871596 PMID:23086925 PMID:23317504 PMID:23728299 PMID:29176719 More... RGD:13792537 NCBI chr 7:11,216,446...11,296,029
Ensembl chr 7:11,216,446...11,295,539
JBrowse link
G Brd7 bromodomain containing 7 enables ISO
IBA
(PMID:16265664)
PMID:21873635
RGD PMID:16265664 PMID:21873635 RGD:13792537 NCBI chr19:18,708,792...18,737,500
Ensembl chr19:18,709,022...18,737,494
JBrowse link
G Brd9 bromodomain containing 9 enables IBA
ISO
PMID:21873635
(PMID:22464331)
RGD PMID:22464331 PMID:21873635 RGD:13792537 NCBI chr 1:29,329,974...29,357,285
Ensembl chr 1:29,329,985...29,357,016
JBrowse link
G Brdt bromodomain testis associated enables ISS
IBA
ISO
IEA
GO_REF:0000024
PMID:21873635
(MGI:5447877|PMID:22922464)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:22922464 PMID:21873635 GO_REF:0000024 GO_REF:0000107 MGI:5447877, RGD:13792537 NCBI chr14:2,421,094...2,445,842
Ensembl chr14:2,387,796...2,445,842
JBrowse link
G Carm1 coactivator-associated arginine methyltransferase 1 enables ISS
ISO
GO_REF:0000024
(MGI:4887326|PMID:17882261)
UniProt
RGD
PMID:17882261 GO_REF:0000024 MGI:4887326 NCBI chr 8:20,097,262...20,141,950
Ensembl chr 8:20,097,254...20,147,689
JBrowse link
G Dpf2 double PHD fingers 2 enables ISO (PMID:28533407), (PMID:29429572) RGD PMID:28533407 PMID:29429572 NCBI chr 1:203,183,674...203,199,037
Ensembl chr 1:203,183,686...203,198,983
JBrowse link
G Kmt2a lysine methyltransferase 2A enables ISO (PMID:19187761) RGD PMID:19187761 NCBI chr 8:45,116,771...45,193,320
Ensembl chr 8:45,118,814...45,193,181
JBrowse link
G Mllt3 MLLT3, super elongation complex subunit enables ISO (PMID:25417107) RGD PMID:25417107 NCBI chr 5:102,259,075...102,515,447
Ensembl chr 5:102,260,011...102,515,361
JBrowse link
G Phip pleckstrin homology domain interacting protein enables ISO (PMID:22464331) RGD PMID:22464331 NCBI chr 8:83,776,802...83,891,192
Ensembl chr 8:83,781,465...83,894,283
JBrowse link
G Psme4 proteasome activator subunit 4 enables IBA
ISO
PMID:21873635
(MGI:5494329|PMID:23706739)
RGD PMID:23706739 PMID:21873635 MGI:5494329, RGD:13792537 NCBI chr14:104,505,716...104,609,410
Ensembl chr14:104,505,716...104,609,408
JBrowse link
G Smarca4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 enables ISO
IEA
(PMID:17582821)
GO_REF:0000107
RGD
Ensembl
PMID:17582821 GO_REF:0000107 NCBI chr 8:20,167,717...20,258,975
Ensembl chr 8:20,167,717...20,258,975
JBrowse link
G Taf1 TATA-box binding protein associated factor 1 enables ISO (PMID:17996705) RGD PMID:17996705 NCBI chr  X:66,640,915...66,716,543
Ensembl chr  X:66,640,982...66,716,543
JBrowse link
G Thap7 THAP domain containing 7 enables ISO (PMID:15561719) RGD PMID:15561719 NCBI chr11:83,482,958...83,486,136
Ensembl chr11:83,483,037...83,486,436
JBrowse link
G Trim24 tripartite motif-containing 24 enables ISO (PMID:21164480) RGD PMID:21164480 NCBI chr 4:66,664,864...66,717,244
Ensembl chr 4:66,566,686...66,717,241
JBrowse link
G Yeats4 YEATS domain containing 4 enables ISO (PMID:30071723) RGD PMID:30071723 NCBI chr 7:52,858,313...52,865,454
Ensembl chr 7:52,858,305...52,865,635
JBrowse link
G Zmynd8 zinc finger, MYND-type containing 8 enables ISO (PMID:27477906) RGD PMID:27477906 NCBI chr 3:154,528,917...154,629,532
Ensembl chr 3:154,529,043...154,628,463
JBrowse link
G Zzef1 zinc finger ZZ-type and EF-hand domain containing 1 enables ISO
IEA
(PMID:33227311)
GO_REF:0000107
RGD
Ensembl
PMID:33227311 GO_REF:0000107 NCBI chr10:57,413,265...57,550,888
Ensembl chr10:57,411,149...57,549,568
JBrowse link
G Zzz3 zinc finger, ZZ-type containing 3 enables ISO (PMID:30217978) RGD PMID:30217978 NCBI chr 2:241,330,366...241,397,308
Ensembl chr 2:241,331,022...241,397,307
JBrowse link
methylated histone binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07006823.1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G AABR07010919.1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G AABR07012658.1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G AABR07015759.1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G AABR07016166.1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G AABR07016310.1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 3:1,492,357...1,494,821 JBrowse link
G AABR07017902.2 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr15:27,225,434...27,225,910 JBrowse link
G AABR07018272.1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G AABR07026842.1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G AABR07027088.1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G AABR07035725.1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G AABR07036101.1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G AABR07036187.1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G AABR07037302.1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G AABR07037307.1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G AABR07049437.1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G AABR07050637.1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G AABR07053236.1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 3:1,529,712...1,534,661 JBrowse link
G AABR07057787.1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G AABR07058017.1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G AABR07061556.1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G AABR07061871.1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G AC118841.1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 5:68,280,970...68,281,345 JBrowse link
G Atrx ATRX, chromatin remodeler enables IEA
ISO
GO_REF:0000107
(PMID:21421568)
Ensembl
RGD
PMID:21421568 GO_REF:0000107 NCBI chr  X:70,850,981...70,997,330
Ensembl chr  X:70,850,981...70,997,330
JBrowse link
G Bptf bromodomain PHD finger transcription factor enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:91,980,279...92,082,731
Ensembl chr10:91,982,758...92,082,769
JBrowse link
G Cbx2 chromobox 2 enables IBA
ISO
PMID:21873635
(MGI:3619779|PMID:16537902)
RGD PMID:16537902 PMID:21873635 MGI:3619779, RGD:13792537 NCBI chr10:104,278,517...104,287,384
Ensembl chr10:104,278,549...104,287,383
JBrowse link
G Cbx3 chromobox 3 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:80,545,450...80,559,284
Ensembl chr 4:80,546,010...80,559,283
JBrowse link
G Cbx4 chromobox 4 enables ISO (MGI:3619779|PMID:16537902) RGD PMID:16537902 MGI:3619779 NCBI chr10:104,337,140...104,343,210 JBrowse link
G Cbx5 chromobox 5 enables ISO (PMID:19783980), (PMID:21029866)
PR:000045397 (MGI:3608198|PMID:16127177)
RGD PMID:16127177 PMID:19783980 PMID:21029866 MGI:3608198 NCBI chr 7:134,333,165...134,376,102
Ensembl chr 7:134,331,335...134,375,022
JBrowse link
G Cbx7 chromobox 7 enables ISO (MGI:3619779|PMID:16537902) RGD PMID:16537902 MGI:3619779 NCBI chr 7:111,460,656...111,479,231
Ensembl chr 7:111,460,656...111,477,973
JBrowse link
G Cbx8 chromobox 8 enables ISO (PMID:21029866) RGD PMID:21029866 NCBI chr10:104,294,518...104,296,956
Ensembl chr10:104,294,518...104,297,024
JBrowse link
G Cdyl chromodomain Y-like enables
NOT|enables
ISO
ISS
(PMID:22009739)
(PMID:18450745)
GO_REF:0000024
RGD
UniProt
PMID:18450745 PMID:22009739 GO_REF:0000024 NCBI chr17:28,982,009...29,204,345
Ensembl chr17:28,982,037...29,204,313
JBrowse link
G Cdyl2 chromodomain Y-like 2 enables ISO (MGI:3805281|PMID:18450745) RGD PMID:18450745 MGI:3805281 NCBI chr19:44,591,734...44,783,258
Ensembl chr19:44,597,459...44,783,022
JBrowse link
G Chd1 chromodomain helicase DNA binding protein 1 enables ISO (PMID:21029866), (PMID:28866611) RGD PMID:21029866 PMID:28866611 NCBI chr 1:56,661,743...56,729,119
Ensembl chr 1:56,664,054...56,728,125
JBrowse link
G Chd8 chromodomain helicase DNA binding protein 8 enables ISO
ISS
(PMID:17938208)
GO_REF:0000024
RGD
UniProt
PMID:17938208 GO_REF:0000024 NCBI chr15:24,905,789...24,965,461
Ensembl chr15:24,905,789...24,951,285
JBrowse link
G Cxxc1 CXXC finger protein 1 enables ISO (MGI:6258144|PMID:30365547) RGD PMID:30365547 MGI:6258144 NCBI chr18:67,813,185...67,818,556
Ensembl chr18:67,813,206...67,818,551
JBrowse link
G Dppa3 developmental pluripotency-associated 3 enables ISS
ISO
IBA
GO_REF:0000024
(MGI:5432962|PMID:22722204)
PMID:21873635
UniProt
RGD
PMID:22722204 PMID:21873635 GO_REF:0000024 MGI:5432962, RGD:13792537 NCBI chr 4:155,851,461...155,854,845
Ensembl chr 4:155,815,296...155,854,861
JBrowse link
G Dppa3l1 developmental pluripotency associated 3-like 1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:56,421,825...56,422,277
Ensembl chr 8:56,421,825...56,422,277
JBrowse link
G Fam156b family with sequence similarity 156, member B enables IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr  X:19,338,236...19,340,924 JBrowse link
G Fmr1 FMRP translational regulator 1 enables IEA
ISO
ISS
GO_REF:0000107
(PMID:24813610)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:24813610 GO_REF:0000024 GO_REF:0000107 NCBI chr  X:147,240,239...147,278,057
Ensembl chr  X:147,240,301...147,278,050
JBrowse link
G Glyr1 glyoxylate reductase 1 homolog enables ISO
ISS
IBA
(PMID:20850016)
GO_REF:0000024
PMID:21873635
RGD
UniProt
PMID:20850016 PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr10:10,532,036...10,567,639
Ensembl chr10:10,532,154...10,567,637
JBrowse link
G Hdgfl2 HDGF like 2 enables ISO (PMID:32459350) RGD PMID:32459350 NCBI chr 9:909,581...929,195
Ensembl chr 9:909,614...929,186
JBrowse link
G Ing1 inhibitor of growth family, member 1 enables IBA
ISO
PMID:21873635
(PMID:16728974)
RGD PMID:16728974 PMID:21873635 RGD:13792537 NCBI chr16:77,937,276...77,945,320
Ensembl chr16:77,937,279...77,946,264
JBrowse link
G Ing2 inhibitor of growth family, member 2 enables ISO
IBA
(PMID:16728974)
PMID:21873635
RGD PMID:16728974 PMID:21873635 RGD:13792537 NCBI chr16:44,573,592...44,584,180
Ensembl chr16:44,575,597...44,583,482
JBrowse link
G Ing3 inhibitor of growth family, member 3 enables IBA
ISO
PMID:21873635
(PMID:16728974), (PMID:19154204)
RGD PMID:16728974 PMID:19154204 PMID:21873635 RGD:13792537 NCBI chr 4:50,477,954...50,505,168
Ensembl chr 4:50,477,962...50,503,715
JBrowse link
G Ing4 inhibitor of growth family, member 4 enables IBA
ISO
PMID:21873635
(PMID:16728974)
RGD PMID:16728974 PMID:21873635 RGD:13792537 NCBI chr 4:157,841,882...157,850,519
Ensembl chr 4:157,841,951...157,850,265
JBrowse link
G Ing5 inhibitor of growth family, member 5 enables IBA
ISO
PMID:21873635
(PMID:16728974)
RGD PMID:16728974 PMID:21873635 RGD:13792537 NCBI chr 9:94,326,919...94,344,220
Ensembl chr 9:94,326,548...94,344,220
JBrowse link
G Jmjd7 jumonji domain containing 7 enables ISO (PMID:28847961) RGD PMID:28847961 NCBI chr 3:106,998,454...107,004,538
Ensembl chr 3:106,998,477...107,004,538
JBrowse link
G Kat8 lysine acetyltransferase 8 enables ISO (PMID:15960975) RGD PMID:15960975 NCBI chr 1:182,524,355...182,536,638 JBrowse link
G Kdm4a lysine demethylase 4A enables ISO (PMID:22373579) RGD PMID:22373579 NCBI chr 5:131,672,754...131,719,534
Ensembl chr 5:131,672,754...131,719,501
JBrowse link
G Kdm5a lysine demethylase 5A enables ISO (PMID:19430464) RGD PMID:19430464 NCBI chr 4:153,565,909...153,643,912
Ensembl chr 4:153,565,846...153,642,422
JBrowse link
G Kdm7a lysine demethylase 7A enables ISO (PMID:20023638) RGD PMID:20023638 NCBI chr 4:67,899,407...67,974,264
Ensembl chr 4:67,904,307...67,966,998
JBrowse link
G Kdm8 lysine demethylase 8 enables ISO
IEA
(PMID:28847961)
GO_REF:0000107
RGD
Ensembl
PMID:28847961 GO_REF:0000107 NCBI chr 1:180,013,969...180,028,829
Ensembl chr 1:180,020,656...180,028,841
JBrowse link
G Kmt2e lysine methyltransferase 2E enables ISO (PMID:23798402), (PMID:24130829) RGD PMID:23798402 PMID:24130829 NCBI chr 4:11,657,811...11,727,373
Ensembl chr 4:11,658,979...11,727,373
JBrowse link
G L3mbtl1 L3MBTL histone methyl-lysine binding protein 1 enables ISS
ISO
GO_REF:0000024
UniProtKB:P10412|UniProtKB:P62805|UniProtKB:Q13185 (PMID:17540172), (PMID:18408754), (PMID:19144645), (PMID:20622853), (PMID:22120668)
UniProt
RGD
PMID:17540172 PMID:18408754 PMID:19144645 PMID:20622853 PMID:22120668 GO_REF:0000024 NCBI chr 3:151,597,903...151,633,657
Ensembl chr 3:151,602,980...151,631,233
JBrowse link
G L3mbtl2 L3MBTL histone methyl-lysine binding protein 2 enables ISO
IBA
ISS
(PMID:19233876)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:19233876 PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 7:113,186,303...113,209,706
Ensembl chr 7:113,186,370...113,207,489
JBrowse link
G LOC103694745 Y-linked testis-specific protein 1-like enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G LOC103694747 Y-linked testis-specific protein 1-like enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G LOC103694776 Y-linked testis-specific protein 1-like enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G LOC108353376 Y-linked testis-specific protein 1-like enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G LOC108353386 Y-linked testis-specific protein 1-like enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G LOC681107 similar to Y-linked testis-specific protein enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G Lrwd1 leucine-rich repeats and WD repeat domain containing 1 enables ISO (PMID:21029866) RGD PMID:21029866 NCBI chr12:20,530,072...20,543,078
Ensembl chr12:20,530,012...20,549,536
JBrowse link
G Mbtd1 mbt domain containing 1 enables ISO
IBA
(PMID:19841675)
PMID:21873635
RGD PMID:19841675 PMID:21873635 RGD:13792537 NCBI chr10:78,839,140...78,895,413
Ensembl chr10:78,839,036...78,893,720
JBrowse link
G Morc3 MORC family CW-type zinc finger 3 enables ISO (PMID:26933034) RGD PMID:26933034 NCBI chr11:33,151,906...33,194,646
Ensembl chr11:33,152,025...33,194,646
JBrowse link
G Morc4 MORC family CW-type zinc finger 4 enables ISO (PMID:26933034) RGD PMID:26933034 NCBI chr  X:103,477,366...103,529,026
Ensembl chr  X:103,480,603...103,528,956
JBrowse link
G Mphosph8 M-phase phosphoprotein 8 enables ISO
ISS
(PMID:20871592)
GO_REF:0000024
RGD
UniProt
PMID:20871592 GO_REF:0000024 NCBI chr15:30,800,546...30,828,415 JBrowse link
G Msh6 mutS homolog 6 enables ISO (PMID:23622243) RGD PMID:23622243 NCBI chr 6:6,562,631...6,579,995
Ensembl chr 6:6,562,632...6,579,956
JBrowse link
G Msl3 MSL complex subunit 3 enables ISO (PMID:20657587) RGD PMID:20657587 NCBI chr  X:25,638,029...25,655,698
Ensembl chr  X:25,637,804...25,655,697
JBrowse link
G Mtf2 metal response element binding transcription factor 2 enables ISO
IBA
(PMID:23142980)
(MGI:5487476|PMID:23104054)
PMID:21873635
RGD PMID:23104054 PMID:23142980 PMID:21873635 MGI:5487476, RGD:13792537 NCBI chr14:1,639,256...1,683,513
Ensembl chr14:1,640,746...1,683,524
JBrowse link
G Ncapd3 non-SMC condensin II complex, subunit D3 enables ISO (PMID:20622854) RGD PMID:20622854 NCBI chr 8:25,437,067...25,506,375
Ensembl chr 8:25,437,123...25,506,373
JBrowse link
G Ncapg2 non-SMC condensin II complex, subunit G2 enables ISO (PMID:20622854) RGD PMID:20622854 NCBI chr 6:137,342,449...137,418,083
Ensembl chr 6:137,342,943...137,415,159
JBrowse link
G Phf1 PHD finger protein 1 enables IBA
ISO
PMID:21873635
(MGI:5487476|PMID:23104054)
(PMID:23142980), (PMID:23273982)
RGD PMID:23104054 PMID:23142980 PMID:23273982 PMID:21873635 MGI:5487476, RGD:13792537 NCBI chr20:5,017,765...5,022,872
Ensembl chr20:5,017,893...5,022,871
JBrowse link
G Phf19 PHD finger protein 19 enables ISO
IBA
(PMID:23104054), (PMID:23160351), (PMID:23273982)
(MGI:5487476|PMID:23104054)
PMID:21873635
RGD PMID:23104054 PMID:23160351 PMID:23273982 PMID:21873635 MGI:5487476, RGD:13792537 NCBI chr 3:18,175,281...18,197,289
Ensembl chr 3:18,175,282...18,196,405
JBrowse link
G Phf2 PHD finger protein 2 enables ISO (PMID:20129925), (PMID:21167174) RGD PMID:20129925 PMID:21167174 NCBI chr17:15,783,221...15,851,209
Ensembl chr17:15,781,864...15,851,208
JBrowse link
G Phf8 PHD finger protein 8 enables ISO (PMID:20023638), (PMID:20208542), (PMID:20346720), (PMID:20622853), (PMID:20622854), (PMID:21029866) RGD PMID:20023638 PMID:20208542 PMID:20346720 PMID:20622853 PMID:20622854 More... NCBI chr  X:20,524,103...20,623,459
Ensembl chr  X:20,524,558...20,623,410
JBrowse link
G Pygo1 pygopus family PHD finger 1 enables ISO (PMID:18498752) RGD PMID:18498752 NCBI chr 8:73,666,467...73,684,641
Ensembl chr 8:73,665,593...73,684,869
JBrowse link
G Rag2 recombination activating 2 enables ISO (MGI:4441252|PMID:18033247), (MGI:4441253|PMID:18025461) RGD PMID:18025461 PMID:18033247 MGI:4441252 MGI:4441253 NCBI chr 3:87,902,373...87,910,227
Ensembl chr 3:87,902,238...87,911,066
JBrowse link
G Rbbp5 RB binding protein 5, histone lysine methyltransferase complex subunit enables ISO (PMID:15960975) RGD PMID:15960975 NCBI chr13:43,912,254...43,939,107
Ensembl chr13:43,912,254...43,939,107
JBrowse link
G Rrp8 ribosomal RNA processing 8 enables IBA
ISS
ISO
PMID:21873635
GO_REF:0000024
(PMID:18485871)
UniProt
RGD
PMID:18485871 PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 1:160,081,092...160,088,709
Ensembl chr 1:160,084,295...160,089,331
JBrowse link
G Sgf29 SAGA complex associated factor 29 enables ISS
IBA
ISO
GO_REF:0000024
PMID:21873635
(PMID:20850016), (PMID:26421618)
UniProt
RGD
PMID:20850016 PMID:26421618 PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 1:181,238,449...181,271,931
Ensembl chr 1:181,238,468...181,274,781
JBrowse link
G Spin1 spindlin 1 enables IBA
ISS
ISO
PMID:21873635
GO_REF:0000024
(PMID:21029866), (PMID:21960006), (PMID:23077255), (PMID:24589551), (PMID:29061846)
UniProt
RGD
PMID:21029866 PMID:21960006 PMID:23077255 PMID:24589551 PMID:29061846 More... GO_REF:0000024, RGD:13792537 NCBI chr17:14,055,685...14,105,366
Ensembl chr17:14,055,689...14,105,411
JBrowse link
G Spin2a spindlin family, member 2A enables ISO
IBA
(PMID:29061846)
PMID:21873635
RGD PMID:29061846 PMID:21873635 RGD:13792537 NCBI chr  X:17,511,018...17,513,001
Ensembl chr  X:17,511,022...17,513,001
JBrowse link
G Spin4 spindlin family, member 4 enables ISO (PMID:29061846) RGD PMID:29061846 NCBI chr  X:59,888,728...59,893,761 JBrowse link
G Ssty1 spermiogenesis specific transcript on the Y 1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G Suz12 SUZ12 polycomb repressive complex 2 subunit enables ISO (PMID:21029866) RGD PMID:21029866 NCBI chr10:64,967,035...65,012,916
Ensembl chr10:64,966,967...65,012,738
JBrowse link
G Tdrd3 tudor domain containing 3 enables IEA
ISO
ISS
GO_REF:0000107
(PMID:21172665)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:21172665 GO_REF:0000024 GO_REF:0000107 NCBI chr15:63,340,531...63,497,208
Ensembl chr15:63,341,235...63,476,110
JBrowse link
G Thap7 THAP domain containing 7 enables ISO (PMID:15561719) RGD PMID:15561719 NCBI chr11:83,482,958...83,486,136
Ensembl chr11:83,483,037...83,486,436
JBrowse link
G Tp53bp1 tumor protein p53 binding protein 1 enables ISO (PMID:22373579), (PMID:23760478), (PMID:28241136)
(MGI:5887191|PMID:23209566)
RGD PMID:22373579 PMID:23209566 PMID:23760478 PMID:28241136 MGI:5887191 NCBI chr 3:108,166,574...108,270,229
Ensembl chr 3:108,169,980...108,269,822
JBrowse link
G Trim24 tripartite motif-containing 24 NOT|enables ISO (PMID:21164480) RGD PMID:21164480 NCBI chr 4:66,664,864...66,717,244
Ensembl chr 4:66,566,686...66,717,241
JBrowse link
G Uhrf1 ubiquitin-like with PHD and ring finger domains 1 enables ISO
IEA
ISS
(PMID:17967883), (PMID:21029866), (PMID:21489993)
GO_REF:0000107
(MGI:5448517|PMID:21489993)
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:17967883 PMID:21029866 PMID:21489993 GO_REF:0000024 GO_REF:0000107 MGI:5448517 NCBI chr 9:1,133,117...1,154,639
Ensembl chr 9:1,134,909...1,154,631
JBrowse link
G Wdr5 WD repeat domain 5 enables ISO
ISS
(PMID:16600877), (PMID:18840606)
GO_REF:0000024
RGD
UniProt
PMID:16600877 PMID:18840606 GO_REF:0000024 NCBI chr 3:10,836,964...10,856,682
Ensembl chr 3:10,837,025...10,856,671
JBrowse link
G Zcwpw1 zinc finger CW-type and PWWP domain containing 1 enables ISO
IBA
(PMID:20826339), (PMID:32744506)
PMID:21873635
(MGI:6358520|PMID:31453335), (MGI:6442007|PMID:32374261), (MGI:6443266|PMID:32352380)
RGD PMID:20826339 PMID:31453335 PMID:32352380 PMID:32374261 PMID:32744506 More... MGI:6358520 MGI:6442007 MGI:6443266, RGD:13792537 NCBI chr12:18,880,625...18,910,713
Ensembl chr12:18,880,633...18,910,711
JBrowse link
G Zcwpw1l1 zinc finger CW-type and PWWP domain containing 1-like 1 enables ISO
IBA
(MGI:6358520|PMID:31453335), (MGI:6442007|PMID:32374261), (MGI:6443266|PMID:32352380)
PMID:21873635
RGD PMID:31453335 PMID:32352380 PMID:32374261 PMID:21873635 MGI:6358520 MGI:6442007 MGI:6443266, RGD:13792537 NCBI chr12:17,798,650...17,812,208 JBrowse link
G Zcwpw2 zinc finger CW-type and PWWP domain containing 2 enables ISO
IBA
(PMID:26933034)
PMID:21873635
RGD PMID:26933034 PMID:21873635 RGD:13792537 NCBI chr 8:117,628,838...117,773,096
Ensembl chr 8:117,681,238...117,773,739
JBrowse link
G Zmynd11 zinc finger, MYND-type containing 11 enables ISO (PMID:24675531)
(MGI:5560379|PMID:24590075)
RGD PMID:24590075 PMID:24675531 MGI:5560379 NCBI chr17:60,542,669...60,631,913
Ensembl chr17:60,543,077...60,631,902
JBrowse link
G Zmynd8 zinc finger, MYND-type containing 8 enables ISO (PMID:27477906) RGD PMID:27477906 NCBI chr 3:154,528,917...154,629,532
Ensembl chr 3:154,529,043...154,628,463
JBrowse link
G Zzef1 zinc finger ZZ-type and EF-hand domain containing 1 enables ISO (PMID:33227311) RGD PMID:33227311 NCBI chr10:57,413,265...57,550,888
Ensembl chr10:57,411,149...57,549,568
JBrowse link
G Zzz3 zinc finger, ZZ-type containing 3 enables ISO (PMID:30217978) RGD PMID:30217978 NCBI chr 2:241,330,366...241,397,308
Ensembl chr 2:241,331,022...241,397,307
JBrowse link
nucleosomal histone binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Brd2 bromodomain containing 2 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr20:4,727,078...4,735,389
Ensembl chr20:4,728,151...4,735,388
JBrowse link
G Brd3 bromodomain containing 3 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:10,773,163...10,829,675
Ensembl chr 3:10,775,272...10,829,577
JBrowse link
G Brd4 bromodomain containing 4 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:11,216,446...11,296,029
Ensembl chr 7:11,216,446...11,295,539
JBrowse link
G Brdt bromodomain testis associated enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:2,421,094...2,445,842
Ensembl chr14:2,387,796...2,445,842
JBrowse link
G Ezh1 enhancer of zeste 1 polycomb repressive complex 2 subunit contributes_to ISO (MGI:3820717|PMID:19026781) RGD PMID:19026781 MGI:3820717 NCBI chr10:86,126,023...86,162,001
Ensembl chr10:86,126,015...86,161,921
JBrowse link
G Hmgb2 high mobility group box 2 IDA RGD PMID:2719962 RGD:2316099 NCBI chr16:32,710,651...32,713,230
Ensembl chr16:32,710,658...32,713,140
JBrowse link
G L3mbtl1 L3MBTL histone methyl-lysine binding protein 1 enables ISO (PMID:17540172) RGD PMID:17540172 NCBI chr 3:151,597,903...151,633,657
Ensembl chr 3:151,602,980...151,631,233
JBrowse link
G Sphk2 sphingosine kinase 2 enables ISO (PMID:19729656) RGD PMID:19729656 NCBI chr 1:96,180,872...96,188,592
Ensembl chr 1:96,180,887...96,188,391
JBrowse link
G Thap7 THAP domain containing 7 enables ISO (PMID:15561719) RGD PMID:15561719 NCBI chr11:83,482,958...83,486,136
Ensembl chr11:83,483,037...83,486,436
JBrowse link
G Uhrf1 ubiquitin-like with PHD and ring finger domains 1 enables IEA
ISO
GO_REF:0000107
(MGI:3038029|PMID:14993289)
Ensembl
RGD
PMID:14993289 GO_REF:0000107 MGI:3038029 NCBI chr 9:1,133,117...1,154,639
Ensembl chr 9:1,134,909...1,154,631
JBrowse link
G Vrk1 VRK serine/threonine kinase 1 enables ISO UniProtKB:P0C0S8 (PMID:22194607) RGD PMID:22194607 NCBI chr 6:124,914,770...124,981,508
Ensembl chr 6:124,914,855...124,981,436
JBrowse link
phosphorylated histone binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Thap7 THAP domain containing 7 enables ISO (PMID:15561719) RGD PMID:15561719 NCBI chr11:83,482,958...83,486,136
Ensembl chr11:83,483,037...83,486,436
JBrowse link
ubiquitin modification-dependent histone binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dnajc2 DnaJ heat shock protein family (Hsp40) member C2 enables ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:21179169)
UniProt
Ensembl
RGD
PMID:21179169 GO_REF:0000024 GO_REF:0000107 NCBI chr 4:13,270,239...13,297,438
Ensembl chr 4:13,270,191...13,297,431
JBrowse link
G Jarid2 jumonji and AT-rich interaction domain containing 2 enables ISO MGI:5888989 (MGI:5888829|PMID:27892467) RGD PMID:27892467 MGI:5888829 NCBI chr17:19,777,487...19,957,696
Ensembl chr17:19,777,266...19,955,690
JBrowse link
G Tp53bp1 tumor protein p53 binding protein 1 enables ISO (PMID:23760478) RGD PMID:23760478 NCBI chr 3:108,166,574...108,270,229
Ensembl chr 3:108,169,980...108,269,822
JBrowse link
G Usp15 ubiquitin specific peptidase 15 enables ISO
IEA
(PMID:24526689)
GO_REF:0000107
RGD
Ensembl
PMID:24526689 GO_REF:0000107 NCBI chr 7:58,756,714...58,848,778
Ensembl chr 7:58,756,872...58,848,721
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  molecular_function 19910
    binding 16997
      protein binding 14384
        histone binding 281
          lysine-acetylated histone binding 22
          methylated histone binding + 105
          nucleosomal histone binding 11
          phosphorylated histone binding 1
          ubiquitin modification-dependent histone binding 4
paths to the root