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ONTOLOGY REPORT - ANNOTATIONS


Term:'de novo' GDP-L-fucose biosynthetic process
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Accession:GO:0042351 term browser browse the term
Definition:The chemical reactions and pathways resulting in the formation of GDP-L-fucose from GDP-D-mannose via GDP-4-dehydro-6-deoxy-D-mannose, requiring the functions of GDP-mannose 4,6-dehydratase (EC:4.2.1.47) and GDP-L-fucose synthase (EC:1.1.1.271).
Synonyms:exact_synonym: 'de novo' GDP-L-fucose anabolism;   'de novo' GDP-L-fucose biosynthesis;   'de novo' GDP-L-fucose formation;   'de novo' GDP-L-fucose synthesis;   GDP-L-fucose biosynthesis, de novo pathway;   GDP-L-fucose biosynthetic process, de novo pathway
 xref: MetaCyc:PWY-66



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'de novo' GDP-L-fucose biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gfus GDP-L-fucose synthase involved_in ISO
IEA
(PMID:9525924)
GO_REF:0000041
RGD
UniProt
PMID:9525924 GO_REF:0000041 NCBI chr 7:107,612,087...107,617,005
Ensembl chr 7:107,612,094...107,616,948
JBrowse link
G Gmds GDP-mannose 4, 6-dehydratase involved_in ISO
IEA
ISS
IBA
(PMID:9525924)
GO_REF:0000041
GO_REF:0000024
GO_REF:0000033
RGD
UniProt
GO_Central
PMID:9525924 GO_REF:0000024 GO_REF:0000033 GO_REF:0000041 NCBI chr17:32,095,315...32,621,975
Ensembl chr17:32,095,386...32,621,961
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20328
    cellular process 18788
      cellular metabolic process 10286
        phosphorus metabolic process 1941
          GDP-L-fucose metabolic process 4
            GDP-L-fucose biosynthetic process 3
              'de novo' GDP-L-fucose biosynthetic process 2
Path 2
Term Annotations click to browse term
  biological_process 20328
    metabolic process 11732
      cellular metabolic process 10286
        cellular aromatic compound metabolic process 5963
          nucleobase-containing compound metabolic process 5720
            nucleobase-containing small molecule metabolic process 710
              nucleotide-sugar metabolic process 40
                GDP-L-fucose metabolic process 4
                  GDP-L-fucose biosynthetic process 3
                    'de novo' GDP-L-fucose biosynthetic process 2
paths to the root