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ONTOLOGY REPORT - ANNOTATIONS


Term:keratan sulfate metabolic process
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Accession:GO:0042339 term browser browse the term
Definition:The chemical reactions and pathways involving keratan sulfate, a glycosaminoglycan with repeat units consisting of beta-1,4-linked D-galactopyranosyl-beta-(1,4)-N-acetyl-D-glucosamine 6-sulfate and with variable amounts of fucose, sialic acid and mannose units; keratan sulfate chains are covalently linked by a glycosidic attachment through the trisaccharide galactosyl-galactosyl-xylose to peptidyl-threonine or serine residues.
Synonyms:exact_synonym: keratan sulfate metabolism;   keratan sulphate metabolic process;   keratan sulphate metabolism


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keratan sulfate metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chst1 carbohydrate sulfotransferase 1 involved_in ISO
IBA
(PMID:9405439)
PMID:21873635
RGD PMID:9405439 PMID:21873635 RGD:13792537 NCBI chr 3:78,552,059...78,574,736
Ensembl chr 3:78,548,525...78,574,883
JBrowse link
keratan sulfate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chst5 carbohydrate sulfotransferase 5 involved_in ISO
IBA
(PMID:11278593)
(MGI:1934540|PMID:11278593)
PMID:21873635
RGD PMID:11278593 PMID:21873635 MGI:1934540, RGD:13792537 NCBI chr19:39,860,729...39,881,019
Ensembl chr19:39,860,501...39,881,064
JBrowse link
keratan sulfate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gns glucosamine (N-acetyl)-6-sulfatase IDA RGD PMID:3161730 RGD:1600571 NCBI chr 7:56,889,139...56,923,170
Ensembl chr 7:56,889,232...56,923,151
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19492
    metabolic process 11797
      cellular metabolic process 10717
        sulfur compound metabolic process 328
          keratan sulfate metabolic process 3
            keratan sulfate biosynthetic process 1
            keratan sulfate catabolic process 1
Path 2
Term Annotations click to browse term
  biological_process 19492
    metabolic process 11797
      organic substance metabolic process 11337
        macromolecule metabolic process 9793
          aminoglycan metabolic process 111
            glycosaminoglycan metabolic process 96
              mucopolysaccharide metabolic process 76
                keratan sulfate metabolic process 3
                  keratan sulfate biosynthetic process 1
                  keratan sulfate catabolic process 1
paths to the root