Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

ONTOLOGY REPORT - ANNOTATIONS

Term:tissue regeneration
go back to main search page
Accession:GO:0042246 term browser browse the term
Definition:The regrowth of lost or destroyed tissues.
Synonyms:never_in_taxon: NCBITaxon:4751 ! Fungi


show annotations for term's descendants           Sort by:
tissue regeneration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adam15 ADAM metallopeptidase domain 15 IEP RGD PMID:11102971 RGD:632016 NCBI chr 2:174,754,629...174,765,136
Ensembl chr 2:174,754,633...174,765,113 		JBrowse link
G Apoa5 apolipoprotein A5 involved_in ISO
IEA		 (PMID:11577099)
GO_REF:0000107		 RGD
Ensembl		 PMID:11577099 GO_REF:0000107 NCBI chr 8:46,561,180...46,563,818
Ensembl chr 8:46,561,229...46,563,816 		JBrowse link
G Apod apolipoprotein D involved_in IEP
IEA		 GO_REF:0000002 InterPro
RGD		 PMID:1695148 GO_REF:0000002, RGD:634662 NCBI chr11:69,431,261...69,452,306
Ensembl chr11:69,431,260...69,452,305 		JBrowse link
G Axl Axl receptor tyrosine kinase TAS RGD PMID:16285961 RGD:1579881 NCBI chr 1:81,265,088...81,296,278
Ensembl chr 1:81,265,088...81,296,265 		JBrowse link
G Ccnb1 cyclin B1 IEP RGD PMID:8123599 RGD:1299843 NCBI chr 2:31,912,190...31,921,163
Ensembl chr 2:31,912,193...31,921,172 		JBrowse link
G Cdkn1a cyclin-dependent kinase inhibitor 1A involved_in ISO (MGI:4439400|PMID:20231440) RGD PMID:20231440 MGI:4439400 NCBI chr20:7,149,177...7,159,727
Ensembl chr20:7,149,217...7,159,585 		JBrowse link
G Cpq carboxypeptidase Q IEP RGD PMID:12390252 RGD:633681 NCBI chr 7:64,264,025...64,830,867
Ensembl chr 7:64,264,081...64,724,546 		JBrowse link
G Dmbt1 deleted in malignant brain tumors 1 IEP RGD PMID:12368192 RGD:632595 NCBI chr 1:185,617,469...185,696,476
Ensembl chr 1:185,617,294...185,696,478 		JBrowse link
G Fgf10 fibroblast growth factor 10 IEP RGD PMID:12565793 RGD:727503 NCBI chr 2:50,801,171...50,878,218
Ensembl chr 2:50,800,992...50,876,866 		JBrowse link
G Gap43 growth associated protein 43 involved_in IEP
IBA		 GO_REF:0000033 GO_Central
RGD		 PMID:12597125 GO_REF:0000033, RGD:728776 NCBI chr11:58,376,371...58,470,047
Ensembl chr11:58,376,371...58,470,045 		JBrowse link
G Gas6 growth arrest specific 6 TAS RGD PMID:16285961 RGD:1579881 NCBI chr16:76,045,430...76,075,904
Ensembl chr16:76,045,426...76,075,904 		JBrowse link
G Gatm glycine amidinotransferase IEP RGD PMID:16626512 RGD:1599814 NCBI chr 3:109,658,919...109,675,508
Ensembl chr 3:109,658,951...109,684,129 		JBrowse link
G Gsn gelsolin IEP RGD PMID:14574581 RGD:1599866 NCBI chr 3:18,585,166...18,638,404
Ensembl chr 3:18,585,172...18,638,402 		JBrowse link
G Igfbp1 insulin-like growth factor binding protein 1 IEP RGD PMID:1705004 RGD:1578549 NCBI chr14:82,047,415...82,052,482
Ensembl chr14:82,047,415...82,052,482 		JBrowse link
G Igsf10 immunoglobulin superfamily, member 10 IDA RGD PMID:14962803 RGD:1302504 NCBI chr 2:143,575,710...143,605,044
Ensembl chr 2:143,576,070...143,604,773 		JBrowse link
G Ina internexin neuronal intermediate filament protein, alpha IEP RGD PMID:12077192 RGD:628341 NCBI chr 1:245,896,775...245,908,330
Ensembl chr 1:245,896,775...245,908,330 		JBrowse link
G Lgr6 leucine-rich repeat-containing G protein-coupled receptor 6 acts_upstream_of_or_within ISO MGI:4438349 (PMID:26460010) RGD PMID:26460010 NCBI chr13:46,424,382...46,544,074
Ensembl chr13:46,424,383...46,543,945 		JBrowse link
G Mdk midkine involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(MGI:3606557|PMID:15482347)		 UniProt
Ensembl
RGD		 PMID:15482347 GO_REF:0000024 GO_REF:0000107 MGI:3606557 NCBI chr 3:77,901,134...77,903,997
Ensembl chr 3:77,901,158...77,903,130 		JBrowse link
G Mustn1 musculoskeletal, embryonic nuclear protein 1 involved_in IDA
IEA		 GO_REF:0000002 InterPro
RGD		 PMID:14718386 GO_REF:0000002, RGD:1302424 NCBI chr16:6,072,908...6,075,161
Ensembl chr16:6,072,833...6,075,161 		JBrowse link
G Nanog Nanog homeobox IEP RGD PMID:19845688 RGD:8661679 NCBI chr 4:155,943,737...155,951,116
Ensembl chr 4:155,943,737...155,951,116 		JBrowse link
G Ninj1 ninjurin 1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr17:15,452,804...15,461,684
Ensembl chr17:15,452,813...15,461,704 		JBrowse link
G Ninj2 ninjurin 2 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 4:153,306,439...153,408,618
Ensembl chr 4:153,306,553...153,408,617 		JBrowse link
G Notch1 notch receptor 1 IEP RGD PMID:15057910 PMID:16048523 RGD:1334443, RGD:1581403 NCBI chr 3:9,277,955...9,323,531
Ensembl chr 3:9,278,086...9,323,531 		JBrowse link
G Notch2 notch receptor 2 IEP RGD PMID:16118793 RGD:1581404 NCBI chr 2:185,610,594...185,744,088
Ensembl chr 2:185,610,589...185,744,088 		JBrowse link
G Notch3 notch receptor 3 IEP RGD PMID:16118793 RGD:1581404 NCBI chr 7:11,132,984...11,184,025
Ensembl chr 7:11,133,706...11,184,025 		JBrowse link
G Plg plasminogen involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2158761 (PMID:11929773)		 Ensembl
RGD		 PMID:11929773 GO_REF:0000107 NCBI chr 1:48,325,186...48,367,643
Ensembl chr 1:48,325,185...48,367,786 		JBrowse link
G Prkcq protein kinase C, theta IEP RGD PMID:12007632 RGD:1625612 NCBI chr17:67,246,394...67,379,049
Ensembl chr17:67,246,394...67,378,704 		JBrowse link
G Ptn pleiotrophin involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(MGI:3606557|PMID:15482347)		 UniProt
Ensembl
RGD		 PMID:15482347 GO_REF:0000024 GO_REF:0000107 MGI:3606557 NCBI chr 4:65,293,731...65,375,572
Ensembl chr 4:65,293,734...65,375,456 		JBrowse link
G Ptpn12 protein tyrosine phosphatase, non-receptor type 12 IEP RGD PMID:7591957 RGD:1599982 NCBI chr 4:14,020,997...14,092,931
Ensembl chr 4:14,021,052...14,092,927 		JBrowse link
G Serpine1 serpin family E member 1 IEP RGD PMID:12399226 RGD:1580125 NCBI chr12:19,601,272...19,611,657
Ensembl chr12:19,601,272...19,611,657 		JBrowse link
G Sox2 SRY-box transcription factor 2 IEP RGD PMID:19845688 RGD:8661679 NCBI chr 2:117,536,929...117,539,340
Ensembl chr 2:117,536,929...117,539,338 		JBrowse link
G Tec tec protein tyrosine kinase involved_in IEP
IBA		 GO_REF:0000033 GO_Central
RGD		 PMID:11097837 GO_REF:0000033, RGD:631955 NCBI chr14:35,352,551...35,461,585
Ensembl chr14:35,352,829...35,461,557 		JBrowse link
G Timp3 TIMP metallopeptidase inhibitor 3 IEP RGD PMID:16683235 RGD:1600154 NCBI chr 7:17,520,827...17,571,850
Ensembl chr 7:17,521,919...17,571,839 		JBrowse link
G Tm4sf4 transmembrane 4 L six family member 4 IEP RGD PMID:11267677 RGD:634233 NCBI chr 2:141,570,321...141,621,263
Ensembl chr 2:141,481,902...141,621,200 		JBrowse link
G Txk TXK tyrosine kinase involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr14:35,463,369...35,519,448
Ensembl chr14:35,463,944...35,519,448 		JBrowse link
G Ucn2 urocortin 2 TAS RGD PMID:12175707 RGD:724785 NCBI chr 8:109,637,624...109,639,173
Ensembl chr 8:109,638,285...109,639,172 		JBrowse link
bone regeneration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccn3 cellular communication network factor 3 involved_in ISS
ISO		 GO_REF:0000024
(MGI:5504324|PMID:23653360)		 UniProt
RGD		 PMID:23653360 GO_REF:0000024 MGI:5504324 NCBI chr 7:86,094,000...86,101,022
Ensembl chr 7:86,094,000...86,101,019 		JBrowse link
G Fzd9 frizzled class receptor 9 involved_in ISO
ISS		 (MGI:5574120|PMID:24391920)
GO_REF:0000024		 RGD
UniProt		 PMID:24391920 GO_REF:0000024 MGI:5574120 NCBI chr12:21,427,084...21,429,398
Ensembl chr12:21,427,084...21,429,398 		JBrowse link
G Lgr6 leucine-rich repeat-containing G protein-coupled receptor 6 acts_upstream_of_or_within ISO MGI:4438349 (PMID:26460010) RGD PMID:26460010 NCBI chr13:46,424,382...46,544,074
Ensembl chr13:46,424,383...46,543,945 		JBrowse link
G Postn periostin IEP RGD PMID:17878602 RGD:10041014 NCBI chr 2:138,527,714...138,559,098
Ensembl chr 2:138,527,696...138,559,099 		JBrowse link
cardiac muscle tissue regeneration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Erbb4 erb-b2 receptor tyrosine kinase 4 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(MGI:4430666|PMID:19632177)		 UniProt
Ensembl
RGD		 PMID:19632177 GO_REF:0000024 GO_REF:0000107 MGI:4430666 NCBI chr 9:69,523,733...70,596,743
Ensembl chr 9:69,531,481...70,596,595 		JBrowse link
G Gata4 GATA binding protein 4 involved_in ISO (MGI:5780531|PMID:25590961) RGD PMID:25590961 MGI:5780531 NCBI chr15:37,459,601...37,531,291
Ensembl chr15:37,459,601...37,505,636 		JBrowse link
G Yap1 Yes1 associated transcriptional regulator involved_in ISO
IEA		 (MGI:5509071|PMID:23918388)
GO_REF:0000107		 RGD
Ensembl		 PMID:23918388 GO_REF:0000107 MGI:5509071 NCBI chr 8:5,095,705...5,166,808
Ensembl chr 8:5,095,722...5,167,010 		JBrowse link
myoblast differentiation involved in skeletal muscle regeneration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dicer1 dicer 1 ribonuclease III acts_upstream_of_or_within ISO MGI:3589208 (PMID:22358842) RGD PMID:22358842 NCBI chr 6:123,627,529...123,692,278
Ensembl chr 6:123,631,250...123,693,965 		JBrowse link
G Mir489 microRNA 489 acts_upstream_of_or_within ISO (PMID:22358842) RGD PMID:22358842 NCBI chr 4:31,693,355...31,693,460
Ensembl chr 4:31,693,355...31,693,460 		JBrowse link
G Wnt10b Wnt family member 10B acts_upstream_of_or_within ISO MGI:3582610 (PMID:15673614) RGD PMID:15673614 NCBI chr 7:129,922,088...129,927,892
Ensembl chr 7:129,922,088...129,927,892 		JBrowse link
myoblast fusion involved in skeletal muscle regeneration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd81 Cd81 molecule involved_in ISS
ISO		 GO_REF:0000024
(MGI:6282938|PMID:23575678)		 UniProt
RGD		 PMID:23575678 GO_REF:0000024 MGI:6282938 NCBI chr 1:198,235,861...198,251,660
Ensembl chr 1:198,241,484...198,251,660 		JBrowse link
G Cd9 CD9 molecule involved_in ISS
ISO		 GO_REF:0000024
(MGI:6282938|PMID:23575678)		 UniProt
RGD		 PMID:23575678 GO_REF:0000024 MGI:6282938 NCBI chr 4:158,256,328...158,289,136
Ensembl chr 4:158,256,328...158,289,222 		JBrowse link
G Mymk myomaker, myoblast fusion factor acts_upstream_of_or_within ISO MGI:4841439 (PMID:25085416) RGD PMID:25085416 NCBI chr 3:10,388,363...10,397,294
Ensembl chr 3:10,388,361...10,397,343 		JBrowse link
G Mymx myomixer, myoblast fusion factor involved_in ISO (MGI:6153677|PMID:29581287)
(PMID:35642635)		 RGD PMID:29581287 PMID:35642635 MGI:6153677 NCBI chr 9:15,397,086...15,398,263
Ensembl chr 9:15,397,144...15,398,263 		JBrowse link
G Ptgfrn prostaglandin F2 receptor inhibitor involved_in ISS
ISO
IEA		 GO_REF:0000024
(MGI:6282938|PMID:23575678)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:23575678 GO_REF:0000024 GO_REF:0000107 MGI:6282938 NCBI chr 2:188,469,521...188,544,795
Ensembl chr 2:188,469,521...188,544,795 		JBrowse link
myoblast migration involved in skeletal muscle regeneration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akirin1 akirin 1 involved_in ISO
IBA		 (MGI:3850794|PMID:19406121)
GO_REF:0000033		 RGD
GO_Central		 PMID:19406121 GO_REF:0000033 MGI:3850794 NCBI chr 5:135,989,378...136,004,782
Ensembl chr 5:135,989,465...136,004,762 		JBrowse link
G Anxa1 annexin A1 involved_in ISO
IEA		 (MGI:5619736|PMID:23144744)
GO_REF:0000107
GO_REF:0000118		 RGD
Ensembl
TreeGrafter		 PMID:23144744 GO_REF:0000107 GO_REF:0000118 MGI:5619736 NCBI chr 1:217,861,175...217,877,205
Ensembl chr 1:217,861,175...217,877,343 		JBrowse link
G Bin3 bridging integrator 3 acts_upstream_of_or_within ISO MGI:3512131 (PMID:23872330) RGD PMID:23872330 NCBI chr15:45,173,725...45,212,607
Ensembl chr15:45,173,732...45,212,604 		JBrowse link
G Mstn myostatin involved_in ISS
ISO		 GO_REF:0000024
(MGI:3850794|PMID:19406121)		 UniProt
RGD		 PMID:19406121 GO_REF:0000024 MGI:3850794 NCBI chr 9:48,452,533...48,458,933
Ensembl chr 9:48,452,533...48,458,933 		JBrowse link
myotube cell development involved in skeletal muscle regeneration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tmem182 transmembrane protein 182 involved_in ISO (MGI:6810807|PMID:34427057) RGD PMID:34427057 MGI:6810807 NCBI chr 9:43,059,432...43,111,318
Ensembl chr 9:43,059,439...43,111,317 		JBrowse link
myotube differentiation involved in skeletal muscle regeneration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl9 BCL9, transcription coactivator acts_upstream_of_or_within ISO MGI:1933114 (PMID:19699733) RGD PMID:19699733 NCBI chr 2:184,760,616...184,846,261
Ensembl chr 2:184,760,618...184,786,435 		JBrowse link
G Klf5 KLF transcription factor 5 acts_upstream_of_or_within ISO MGI:4353154|MGI:4421792 (PMID:27743478) RGD PMID:27743478 NCBI chr15:76,060,320...76,079,445
Ensembl chr15:76,064,258...76,079,445 		JBrowse link
G Myod1 myogenic differentiation 1 acts_upstream_of_or_within ISO (PMID:1348494) RGD PMID:1348494 NCBI chr 1:96,884,864...96,887,574
Ensembl chr 1:96,884,948...96,887,554 		JBrowse link
G Tmem182 transmembrane protein 182 involved_in ISO (MGI:6810807|PMID:34427057) RGD PMID:34427057 MGI:6810807 NCBI chr 9:43,059,432...43,111,318
Ensembl chr 9:43,059,439...43,111,317 		JBrowse link
negative regulation of cardiac muscle tissue regeneration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdkn1a cyclin-dependent kinase inhibitor 1A involved_in ISO (MGI:5577019|PMID:24380855) RGD PMID:24380855 MGI:5577019 NCBI chr20:7,149,177...7,159,727
Ensembl chr20:7,149,217...7,159,585 		JBrowse link
G Cdkn1b cyclin-dependent kinase inhibitor 1B involved_in ISO (MGI:5577019|PMID:24380855) RGD PMID:24380855 MGI:5577019 NCBI chr 4:167,760,067...167,765,177
Ensembl chr 4:167,760,181...167,764,982 		JBrowse link
negative regulation of epithelium regeneration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dusp10 dual specificity phosphatase 10 involved_in ISO (MGI:5905244|PMID:25772234) RGD PMID:25772234 MGI:5905244 NCBI chr13:95,613,716...95,651,716
Ensembl chr13:95,614,292...95,651,716 		JBrowse link
negative regulation of skeletal muscle tissue regeneration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Myoz1 myozenin 1 involved_in ISO (MGI:3831256|PMID:18846255) RGD PMID:18846255 MGI:3831256 NCBI chr15:3,644,333...3,651,584
Ensembl chr15:3,644,368...3,652,884 		JBrowse link
neural tissue regeneration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gnat1 G protein subunit alpha transducin 1 acts_upstream_of_or_within ISO MGI:95779 (PMID:30111842) RGD PMID:30111842 NCBI chr 8:108,350,935...108,355,671
Ensembl chr 8:108,350,935...108,355,671 		JBrowse link
G Gnat2 G protein subunit alpha transducin 2 acts_upstream_of_or_within ISO MGI:95778 (PMID:30111842) RGD PMID:30111842 NCBI chr 2:195,726,371...195,735,866
Ensembl chr 2:195,726,762...195,735,866 		JBrowse link
G Vps54 VPS54 subunit of GARP complex involved_in IEA
ISO		 GO_REF:0000107
(PMID:24141020)		 Ensembl
RGD		 PMID:24141020 GO_REF:0000107 NCBI chr14:95,378,821...95,455,871
Ensembl chr14:95,378,012...95,455,857 		JBrowse link
positive regulation of epithelium regeneration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Serpine1 serpin family E member 1 IMP RGD PMID:17071586 RGD:1624958 NCBI chr12:19,601,272...19,611,657
Ensembl chr12:19,601,272...19,611,657 		JBrowse link
positive regulation of satellite cell activation involved in skeletal muscle regeneration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Capn3 calpain 3 involved_in IEA
ISO
ISS		 GO_REF:0000107
(MGI:5306562|PMID:20139084)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:20139084 GO_REF:0000024 GO_REF:0000107 MGI:5306562 NCBI chr 3:107,407,518...107,457,858
Ensembl chr 3:107,407,850...107,457,858 		JBrowse link
G Sox15 SRY-box transcription factor 15 involved_in ISO (MGI:3714565|PMID:17363903) RGD PMID:17363903 MGI:3714565 NCBI chr10:54,373,045...54,374,749
Ensembl chr10:54,372,403...54,376,591 		JBrowse link
positive regulation of skeletal muscle tissue regeneration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hopx HOP homeobox acts_upstream_of_or_within ISO MGI:2389244 (PMID:17192267) RGD PMID:17192267 NCBI chr14:31,055,912...31,082,909
Ensembl chr14:31,075,148...31,082,909 		JBrowse link
G Mir675 microRNA 675 acts_upstream_of_or_within ISO (PMID:24532688) RGD PMID:24532688 NCBI chr 1:197,732,275...197,732,358
Ensembl chr 1:197,732,275...197,732,358 		JBrowse link
G Myod1 myogenic differentiation 1 involved_in
acts_upstream_of_or_within		 ISS
ISO		 PMID:17028574
(PMID:17028574)		 RGD PMID:17028574 PMID:17028574 RGD:8554766 NCBI chr 1:96,884,864...96,887,574
Ensembl chr 1:96,884,948...96,887,554 		JBrowse link
G Ppard peroxisome proliferator-activated receptor delta involved_in ISO (MGI:5319147|PMID:22040534) RGD PMID:22040534 MGI:5319147 NCBI chr20:6,298,785...6,363,970
Ensembl chr20:6,298,785...6,363,968 		JBrowse link
G Tgfbr2 transforming growth factor, beta receptor 2 IEP RGD PMID:10672325 RGD:1601614 NCBI chr 8:115,794,537...115,883,615
Ensembl chr 8:115,794,537...115,883,228 		JBrowse link
regulation of epithelium regeneration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eppk1 epiplakin 1 involved_in ISO (MGI:3830169|PMID:16382146) RGD PMID:16382146 MGI:3830169 NCBI chr 7:107,816,919...107,842,946
Ensembl chr 7:107,817,693...107,831,159 		JBrowse link
G Mir29b1 microRNA 29b-1 involved_in ISO (PMID:23221517) RGD PMID:23221517 NCBI chr 4:59,650,987...59,651,067
Ensembl chr 4:59,650,986...59,651,067 		JBrowse link
G Mir29b2 microRNA 29b-2 involved_in ISO (PMID:23221517) RGD PMID:23221517 NCBI chr13:106,570,371...106,570,451
Ensembl chr13:106,570,367...106,570,456 		JBrowse link
regulation of satellite cell activation involved in skeletal muscle regeneration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gjd4 gap junction protein, delta 4 acts_upstream_of_or_within ISO MGI:5009133 (PMID:21272575) RGD PMID:21272575 NCBI chr17:57,348,844...57,352,601
Ensembl chr17:57,349,877...57,352,446 		JBrowse link
regulation of skeletal muscle tissue regeneration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G P2rx5 purinergic receptor P2X 5 IMP RGD PMID:12135987 RGD:729229 NCBI chr10:57,777,737...57,789,426
Ensembl chr10:57,777,819...57,789,423 		JBrowse link
G Spaar small regulatory polypeptide of amino acid response involved_in ISO (MGI:5822922|PMID:28024296) RGD PMID:28024296 MGI:5822922 NCBI chr 5:57,985,423...57,987,482 JBrowse link
satellite cell activation involved in skeletal muscle regeneration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Klf5 KLF transcription factor 5 acts_upstream_of_or_within ISO MGI:4353154|MGI:4421792 (PMID:27743478) RGD PMID:27743478 NCBI chr15:76,060,320...76,079,445
Ensembl chr15:76,064,258...76,079,445 		JBrowse link
G Kpna1 karyopherin subunit alpha 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:3775202 (PMID:27434733)		 Ensembl
RGD		 PMID:27434733 GO_REF:0000107 NCBI chr11:64,715,844...64,774,647
Ensembl chr11:64,717,563...64,774,623 		JBrowse link
sensory epithelium regeneration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ascl3 achaete-scute family bHLH transcription factor 3 involved_in ISO (MGI:6102250|PMID:27910949) RGD PMID:27910949 MGI:6102250 NCBI chr 1:163,755,306...163,755,951
Ensembl chr 1:163,754,956...163,759,682 		JBrowse link
skeletal muscle satellite cell maintenance involved in skeletal muscle regeneration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ezh2 enhancer of zeste 2 polycomb repressive complex 2 subunit acts_upstream_of_or_within ISO MGI:2661097|MGI:3574960 (PMID:21498568) RGD PMID:21498568 NCBI chr 4:76,624,399...76,687,362
Ensembl chr 4:76,624,399...76,687,362 		JBrowse link
G Fzd7 frizzled class receptor 7 acts_upstream_of_or_within ISO (PMID:19497282) RGD PMID:19497282 NCBI chr 9:60,931,433...60,934,252
Ensembl chr 9:60,930,875...60,935,781 		JBrowse link
G Igf1 insulin-like growth factor 1 involved_in ISO
IEA		 (PMID:17531227)
GO_REF:0000107		 RGD
Ensembl		 PMID:17531227 GO_REF:0000107 NCBI chr 7:22,282,895...22,361,972
Ensembl chr 7:22,282,930...22,359,296 		JBrowse link
G Selenon selenoprotein N involved_in ISO (MGI:4936779|PMID:21131290) RGD PMID:21131290 MGI:4936779 NCBI chr 5:146,748,638...146,764,656
Ensembl chr 5:146,748,652...146,763,059 		JBrowse link
G Wnt7a Wnt family member 7A acts_upstream_of_or_within ISO (PMID:19497282) RGD PMID:19497282 NCBI chr 4:123,863,108...123,908,981
Ensembl chr 4:123,863,108...123,908,981 		JBrowse link
skeletal muscle tissue regeneration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B4galnt2 beta-1,4-N-acetyl-galactosaminyl transferase 2 acts_upstream_of_or_within ISO (PMID:27561302) RGD PMID:27561302 NCBI chr10:80,801,594...80,828,005
Ensembl chr10:80,802,941...80,857,700 		JBrowse link
G Bin3 bridging integrator 3 acts_upstream_of_or_within ISO MGI:3512131 (PMID:23872330) RGD PMID:23872330 NCBI chr15:45,173,725...45,212,607
Ensembl chr15:45,173,732...45,212,604 		JBrowse link
G Cflar CASP8 and FADD-like apoptosis regulator involved_in ISO (MGI:5707584|PMID:21364645) RGD PMID:21364645 MGI:5707584 NCBI chr 9:60,185,338...60,236,173
Ensembl chr 9:60,185,452...60,237,034 		JBrowse link
G Col6a1 collagen type VI alpha 1 chain acts_upstream_of_or_within ISO MGI:6401814 (PMID:28043812) RGD PMID:28043812 NCBI chr20:11,906,105...11,924,599
Ensembl chr20:11,905,957...11,924,597 		JBrowse link
G Dag1 dystroglycan 1 IEP RGD PMID:12086334 RGD:11541049 NCBI chr 8:108,890,926...108,955,611
Ensembl chr 8:108,890,929...108,952,325 		JBrowse link
G Dmd dystrophin acts_upstream_of_or_within IEP
ISO		 MGI:1856328|MGI:3650059 (PMID:32483152) RGD PMID:32483152 PMID:12086334 RGD:11541049 NCBI chr  X:47,272,324...49,504,219
Ensembl chr  X:47,272,331...49,504,207 		JBrowse link
G Dysf dysferlin acts_upstream_of_or_within ISO MGI:1857883 (PMID:19286669) RGD PMID:19286669 NCBI chr 4:116,490,877...116,690,709
Ensembl chr 4:116,490,616...116,690,709 		JBrowse link
G Eno3 enolase 3 IEP RGD PMID:16752196 RGD:2301764 NCBI chr10:55,370,531...55,375,921
Ensembl chr10:55,366,975...55,375,921 		JBrowse link
G Fkrp fukutin related protein acts_upstream_of_or_within ISO MGI:4834518 (PMID:25976249), (PMID:26574668), (PMID:27561302), (PMID:29320543) RGD PMID:25976249 PMID:26574668 PMID:27561302 PMID:29320543 NCBI chr 1:77,479,641...77,486,954
Ensembl chr 1:77,476,084...77,486,992 		JBrowse link
G Gja1 gap junction protein, alpha 1 acts_upstream_of_or_within ISO (PMID:15601660) RGD PMID:15601660 NCBI chr20:35,756,007...35,768,481
Ensembl chr20:35,755,991...35,768,582 		JBrowse link
G Gpx1 glutathione peroxidase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2158814 (PMID:16962942)		 Ensembl
RGD		 PMID:16962942 GO_REF:0000107 NCBI chr 8:109,026,905...109,028,031
Ensembl chr 8:109,026,905...109,028,024 		JBrowse link
G Hdgfl2 HDGF like 2 involved_in ISO
IEA		 (MGI:6442596|PMID:32459350)
GO_REF:0000107		 RGD
Ensembl		 PMID:32459350 GO_REF:0000107 MGI:6442596 NCBI chr 9:909,581...929,195
Ensembl chr 9:909,614...929,186 		JBrowse link
G Ifrd1 interferon-related developmental regulator 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:3043556 (PMID:15060170)		 Ensembl
RGD		 PMID:15060170 GO_REF:0000107 NCBI chr 6:57,269,395...57,317,833
Ensembl chr 6:57,269,384...57,288,990 		JBrowse link
G Klf5 KLF transcription factor 5 acts_upstream_of_or_within ISO MGI:4353154|MGI:4421792 (PMID:27743478) RGD PMID:27743478 NCBI chr15:76,060,320...76,079,445
Ensembl chr15:76,064,258...76,079,445 		JBrowse link
G Kpna1 karyopherin subunit alpha 1 acts_upstream_of_or_within ISO MGI:3775202 (PMID:27434733) RGD PMID:27434733 NCBI chr11:64,715,844...64,774,647
Ensembl chr11:64,717,563...64,774,623 		JBrowse link
G Large1 LARGE xylosyl- and glucuronyltransferase 1 involved_in
acts_upstream_of_or_within		 ISO (MGI:5547845|PMID:24132234)
MGI:1856965 (PMID:24722207), (PMID:25976249)		 RGD PMID:24132234 PMID:24722207 PMID:25976249 MGI:5547845 NCBI chr19:11,603,129...12,048,930
Ensembl chr19:11,603,129...12,048,930 		JBrowse link
G Mstn myostatin involved_in IEP
ISO		 (PMID:26923583) RGD PMID:26923583 PMID:11206133 RGD:2303599 NCBI chr 9:48,452,533...48,458,933
Ensembl chr 9:48,452,533...48,458,933 		JBrowse link
G Mtpn myotrophin IEP RGD PMID:12467730 RGD:632798 NCBI chr 4:64,159,273...64,186,686
Ensembl chr 4:64,157,641...64,186,724 		JBrowse link
G Myf6 myogenic factor 6 IMP RGD PMID:12707053 RGD:1600530 NCBI chr 7:42,813,008...42,814,852
Ensembl chr 7:42,812,792...42,814,852 		JBrowse link
G Mymk myomaker, myoblast fusion factor acts_upstream_of_or_within ISO MGI:4841439 (PMID:25085416) RGD PMID:25085416 NCBI chr 3:10,388,363...10,397,294
Ensembl chr 3:10,388,361...10,397,343 		JBrowse link
G Mymx myomixer, myoblast fusion factor involved_in ISO (MGI:6153677|PMID:29581287) RGD PMID:29581287 MGI:6153677 NCBI chr 9:15,397,086...15,398,263
Ensembl chr 9:15,397,144...15,398,263 		JBrowse link
G Myod1 myogenic differentiation 1 involved_in
acts_upstream_of		 IEP
ISO
IMP		 (PMID:26658965)
(PMID:17028574)		 RGD PMID:17028574 PMID:26658965 PMID:18077604 PMID:12063168 RGD:9686074, RGD:729226 NCBI chr 1:96,884,864...96,887,574
Ensembl chr 1:96,884,948...96,887,554 		JBrowse link
G Myog myogenin IEP RGD PMID:10867795 RGD:9686125 NCBI chr13:45,745,455...45,748,044
Ensembl chr13:45,745,436...45,748,039 		JBrowse link
G Naca nascent polypeptide associated complex subunit alpha involved_in ISO (MGI:4867362|PMID:21071677) RGD PMID:21071677 MGI:4867362 NCBI chr 7:468,862...481,992
Ensembl chr 7:469,723...481,992 		JBrowse link
G Nfix nuclear factor I X acts_upstream_of_or_within
involved_in		 ISO MGI:3802570 (PMID:32183151)
MGI:3802570 (PMID:26923583), (PMID:29057908)		 RGD PMID:26923583 PMID:29057908 PMID:32183151 NCBI chr19:23,355,388...23,450,360
Ensembl chr19:23,355,498...23,448,265 		JBrowse link
G Pax7 paired box 7 acts_upstream_of_or_within ISO (PMID:9608680) RGD PMID:9608680 NCBI chr 5:151,996,368...152,098,023
Ensembl chr 5:151,999,092...152,097,979 		JBrowse link
G Pkm pyruvate kinase M1/2 IDA RGD PMID:145474 RGD:2303143 NCBI chr 8:60,057,629...60,079,600
Ensembl chr 8:60,057,402...60,079,599 		JBrowse link
G Plau plasminogen activator, urokinase IMP RGD PMID:12919869 RGD:1581928 NCBI chr15:3,456,230...3,462,732
Ensembl chr15:3,456,232...3,462,775 		JBrowse link
G Plaur plasminogen activator, urokinase receptor IEP RGD PMID:12919869 RGD:1581928 NCBI chr 1:80,053,440...80,068,384
Ensembl chr 1:80,050,324...80,068,595 		JBrowse link
G Selenon selenoprotein N acts_upstream_of_or_within ISO MGI:4946396 (PMID:21131290) RGD PMID:21131290 NCBI chr 5:146,748,638...146,764,656
Ensembl chr 5:146,748,652...146,763,059 		JBrowse link
G Sgca sarcoglycan, alpha IEP RGD PMID:12086334 RGD:11541049 NCBI chr10:79,904,698...79,922,808
Ensembl chr10:79,908,738...79,922,813 		JBrowse link
G Sox15 SRY-box transcription factor 15 acts_upstream_of_or_within ISO MGI:3056078 (PMID:15367664) RGD PMID:15367664 NCBI chr10:54,373,045...54,374,749
Ensembl chr10:54,372,403...54,376,591 		JBrowse link
G Tarbp2 Tarbp2 subunit of RISC loading complex acts_upstream_of_or_within ISO MGI:2135565|MGI:5645258 (PMID:27159388) RGD PMID:27159388 NCBI chr 7:133,649,118...133,654,306
Ensembl chr 7:133,649,090...133,654,314 		JBrowse link
G Vim vimentin IEP RGD PMID:18941770 RGD:6480441 NCBI chr17:76,668,701...76,677,186
Ensembl chr17:76,668,647...76,677,187 		JBrowse link
G Wnt10b Wnt family member 10B acts_upstream_of_or_within ISO MGI:3582610 (PMID:15673614) RGD PMID:15673614 NCBI chr 7:129,922,088...129,927,892
Ensembl chr 7:129,922,088...129,927,892 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20292
    developmental process 7042
      developmental growth 881
        tissue regeneration 108
          bone regeneration 4
          cardiac muscle tissue regeneration + 5
          epithelium regeneration + 6
          fin regeneration 0
          neural tissue regeneration 3
          skeletal muscle tissue regeneration + 57
Path 2
Term Annotations click to browse term
  biological_process 20292
    developmental process 7042
      anatomical structure development 6550
        regeneration 343
          tissue regeneration 108
            bone regeneration 4
            cardiac muscle tissue regeneration + 5
            epithelium regeneration + 6
            fin regeneration 0
            neural tissue regeneration 3
            skeletal muscle tissue regeneration + 57
paths to the root