Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)

ONTOLOGY REPORT - ANNOTATIONS

Term:halogenated hydrocarbon metabolic process
go back to main search page
Accession:GO:0042197 term browser browse the term
Definition:The chemical reactions and pathways involving halogenated hydrocarbons, compounds derived from hydrocarbons by replacing one or more hydrogen atoms with halogen atoms. Halogens include fluorine, chlorine, bromine and iodine.
Synonyms:exact_synonym: halogenated hydrocarbon metabolism


show annotations for term's descendants           Sort by:
4-chlorobiphenyl metabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G UGT1A6 UDP glucuronosyltransferase 1 family, polypeptide A6 ISO RGD PMID:16006569 RGD:1600442 NCBI chr25:45,081,655...45,161,584
Ensembl chr25:45,032,130...45,160,941 		JBrowse link
carbon tetrachloride metabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DNAJA2 DnaJ heat shock protein family (Hsp40) member A2 ISO RGD PMID:15270078 RGD:4891447 NCBI chr 2:67,903,292...67,916,267 JBrowse link
trichloroethylene metabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CYP2F1 cytochrome P450 family 2 subfamily F member 1 ISO RGD PMID:15987776 RGD:2301693 NCBI chr 1:112,973,776...112,986,419
Ensembl chr 1:112,974,847...112,986,123 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 17088
    cellular process 16614
      metabolic process 10876
        organohalogen metabolic process 5
          halogenated hydrocarbon metabolic process 3
            1,2,3-tribromopropane metabolic process 0
            1,2-dichloroethane metabolic process + 0
            carbon tetrachloride metabolic process + 1
            chlorinated hydrocarbon metabolic process + 2
            dichloromethane metabolic process 0
            halogenated hydrocarbon catabolic process + 0
            methyl fluoride metabolic process 0
Path 2
Term Annotations click to browse term
  biological_process 17088
    response to stimulus 9063
      response to chemical 5017
        cellular response to chemical stimulus 2542
          cellular response to xenobiotic stimulus 174
            xenobiotic metabolic process 66
              halogenated hydrocarbon metabolic process 3
                1,2,3-tribromopropane metabolic process 0
                1,2-dichloroethane metabolic process + 0
                carbon tetrachloride metabolic process + 1
                chlorinated hydrocarbon metabolic process + 2
                dichloromethane metabolic process 0
                halogenated hydrocarbon catabolic process + 0
                methyl fluoride metabolic process 0
paths to the root