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ONTOLOGY REPORT - ANNOTATIONS


Term:xenobiotic catabolic process
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Accession:GO:0042178 term browser browse the term
Definition:The chemical reactions and pathways resulting in the breakdown of a xenobiotic compound, a compound foreign to living organisms. Used of chemical compounds, e.g. a xenobiotic chemical, such as a pesticide.
Synonyms:exact_synonym: xenobiotic breakdown;   xenobiotic catabolism;   xenobiotic degradation


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xenobiotic catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcc2 ATP binding cassette subfamily C member 2 IMP RGD PMID:18088505 RGD:14700808 NCBI chr 1:263,554,426...263,612,556
Ensembl chr 1:263,554,453...263,613,252
JBrowse link
G Acsl1 acyl-CoA synthetase long-chain family member 1 IDA RGD PMID:10725307 RGD:2312871 NCBI chr16:48,937,456...49,003,898
Ensembl chr16:48,937,456...49,003,246
JBrowse link
G Cryz crystallin zeta involved_in ISO
ISS
(PMID:17497241)
GO_REF:0000024
RGD
UniProt
PMID:17497241 GO_REF:0000024 NCBI chr 2:260,884,315...260,911,827
Ensembl chr 2:260,884,337...260,911,792
JBrowse link
G Gsta1 glutathione S-transferase alpha 1 involved_in IDA PMID:17112229 CAFA PMID:17112229 RGD:12793043 NCBI chr 9:27,366,404...27,381,004
Ensembl chr 9:27,368,272...27,452,902
JBrowse link
G Gsta2 glutathione S-transferase alpha 2 involved_in IDA PMID:17112229 CAFA PMID:17112229 RGD:12793043 NCBI chr 8:85,640,081...85,645,621 JBrowse link
G Gsta5 glutathione S-transferase alpha 5 involved_in IDA PMID:17112229 CAFA PMID:17112229 RGD:12793043 NCBI chr 8:85,553,659...85,564,914
Ensembl chr 8:85,553,734...85,565,179
JBrowse link
G Gstm1 glutathione S-transferase mu 1 involved_in IDA
ISO
PMID:17112229
(PMID:8373352)
RGD PMID:8373352, PMID:17112229 RGD:12793043 NCBI chr 2:210,803,869...210,809,461
Ensembl chr 2:210,803,869...210,809,306
JBrowse link
G Gstm2 glutathione S-transferase mu 2 involved_in IDA
IEA
ISO
PMID:17112229
GO_REF:0000107
(PMID:16549767), (PMID:2034681), (PMID:8373352)
Ensembl
RGD
PMID:2034681 PMID:8373352 PMID:16549767, PMID:17112229 GO_REF:0000107, RGD:12793043 NCBI chr 2:210,778,041...210,782,807
Ensembl chr 2:210,720,704...210,782,856
JBrowse link
G Gstm3 glutathione S-transferase mu 3 involved_in ISO (PMID:8373352) RGD PMID:8373352 NCBI chr 2:210,685,204...210,688,273
Ensembl chr 2:210,685,197...210,688,272
JBrowse link
G Gstm4 glutathione S-transferase mu 4 involved_in
acts_upstream_of_or_within
ISO (PMID:8373352)
(MGI:2387281|PMID:12069689)
RGD PMID:8373352 PMID:12069689 MGI:2387281 NCBI chr 2:210,834,013...210,839,242
Ensembl chr 2:210,833,884...210,839,295
JBrowse link
G Gstm5 glutathione S-transferase, mu 5 involved_in ISO (PMID:8373352) RGD PMID:8373352 NCBI chr 2:210,685,338...210,688,133
Ensembl chr 2:210,685,197...210,688,272
JBrowse link
G Gstm7 glutathione S-transferase, mu 7 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 2:210,720,719...210,726,179
Ensembl chr 2:210,720,704...210,782,856
JBrowse link
G Gsto1 glutathione S-transferase omega 1 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:12928150)
UniProt
Ensembl
RGD
PMID:12928150 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:267,607,437...267,617,387
Ensembl chr 1:267,607,418...267,617,387
JBrowse link
biphenyl catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ugt1a1 UDP glucuronosyltransferase family 1 member A1 IDA RGD PMID:16006569 RGD:1600442 NCBI chr 9:95,295,701...95,302,822
Ensembl chr 9:95,161,157...95,302,822
JBrowse link
G Ugt2b17 UDP glucuronosyltransferase family 2 member B17 IDA RGD PMID:16006569 RGD:1600442 NCBI chr14:22,724,399...22,736,148
Ensembl chr14:22,724,070...22,825,444
JBrowse link
dibenzo-p-dioxin catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cyp1a1 cytochrome P450, family 1, subfamily a, polypeptide 1 IDA
IMP
2,3,7,8-tetrachlorodibenzo-p-dioxin RGD PMID:15812643, PMID:12914780 RGD:2306662, RGD:2306673 NCBI chr 8:62,472,087...62,478,122
Ensembl chr 8:62,472,095...62,478,147
JBrowse link
phenylacetate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acaa1a acetyl-CoA acyltransferase 1A involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:128,027,880...128,036,471
Ensembl chr 8:128,027,958...128,036,236
JBrowse link
G Acaa1b acetyl-Coenzyme A acyltransferase 1B involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:127,836,235...127,845,296 JBrowse link
G Pon3 paraoxonase 3 IDA RGD PMID:12946270 RGD:1303961 NCBI chr 4:30,311,981...30,338,679
Ensembl chr 4:30,311,982...30,338,679
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19611
    metabolic process 11877
      cellular metabolic process 10830
        cellular catabolic process 2170
          xenobiotic catabolic process 19
            1,3-dichloro-2-propanol catabolic process 0
            2-aminobenzenesulfonate catabolic process 0
            2-nitropropane catabolic process 0
            3-hydroxyphenylacetate catabolic process 0
            3-methylquinoline catabolic process 0
            3-phenylpropionate catabolic process 0
            4-nitrophenol catabolic process 0
            6-hydroxycineole catabolic process 0
            acrylonitrile catabolic process 0
            adamantanone catabolic process 0
            anaerobic acetylene catabolic process 0
            anaerobic cyclohexane-1-carboxylate catabolic process 0
            anthranilate catabolic process 0
            arsonoacetate catabolic process 0
            biphenyl catabolic process 2
            bisphenol A catabolic process 0
            caprolactam catabolic process 0
            carbazole catabolic process 0
            cresol catabolic process + 0
            dibenzo-p-dioxin catabolic process 1
            dibenzofuran catabolic process 0
            dibenzothiophene catabolic process 0
            fluorene catabolic process 0
            halogenated hydrocarbon catabolic process + 0
            insecticide catabolic process + 0
            methyl ethyl ketone catabolic process 0
            methylnaphthalene catabolic process 0
            nylon catabolic process 0
            organosilicon catabolic process + 0
            phenanthrene catabolic process + 0
            phenylacetate catabolic process 3
            phenylmercury acetate catabolic process 0
            phthalate catabolic process 0
            propylene catabolic process 0
            s-triazine compound catabolic process + 0
            styrene catabolic process 0
            thiocyanate catabolic process 0
            toluene catabolic process + 0
            triethanolamine catabolic process 0
            xylene catabolic process + 0
Path 2
Term Annotations click to browse term
  biological_process 19611
    cellular process 18456
      cellular response to stimulus 8799
        cellular response to chemical stimulus 3521
          cellular response to xenobiotic stimulus 108
            xenobiotic metabolic process 104
              xenobiotic catabolic process 19
                1,3-dichloro-2-propanol catabolic process 0
                2-aminobenzenesulfonate catabolic process 0
                2-nitropropane catabolic process 0
                3-hydroxyphenylacetate catabolic process 0
                3-methylquinoline catabolic process 0
                3-phenylpropionate catabolic process 0
                4-nitrophenol catabolic process 0
                6-hydroxycineole catabolic process 0
                acrylonitrile catabolic process 0
                adamantanone catabolic process 0
                anaerobic acetylene catabolic process 0
                anaerobic cyclohexane-1-carboxylate catabolic process 0
                anthranilate catabolic process 0
                arsonoacetate catabolic process 0
                biphenyl catabolic process 2
                bisphenol A catabolic process 0
                caprolactam catabolic process 0
                carbazole catabolic process 0
                cresol catabolic process + 0
                dibenzo-p-dioxin catabolic process 1
                dibenzofuran catabolic process 0
                dibenzothiophene catabolic process 0
                fluorene catabolic process 0
                halogenated hydrocarbon catabolic process + 0
                insecticide catabolic process + 0
                methyl ethyl ketone catabolic process 0
                methylnaphthalene catabolic process 0
                nylon catabolic process 0
                organosilicon catabolic process + 0
                phenanthrene catabolic process + 0
                phenylacetate catabolic process 3
                phenylmercury acetate catabolic process 0
                phthalate catabolic process 0
                propylene catabolic process 0
                s-triazine compound catabolic process + 0
                styrene catabolic process 0
                thiocyanate catabolic process 0
                toluene catabolic process + 0
                triethanolamine catabolic process 0
                xylene catabolic process + 0
paths to the root