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ONTOLOGY REPORT - ANNOTATIONS


Term:negative regulation of protein catabolic process
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Accession:GO:0042177 term browser browse the term
Definition:Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds.
Synonyms:exact_synonym: down regulation of protein catabolic process;   downregulation of protein catabolic process;   negative regulation of protein breakdown;   negative regulation of protein catabolism;   negative regulation of protein degradation
 narrow_synonym: inhibition of protein catabolic process


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negative regulation of protein catabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADGRB1 adhesion G protein-coupled receptor B1 ISO (MGI:MGI:5643972|PMID:25751059) UniProtKB PMID:25751059 MGI:MGI:5643972 NCBI chr 8:139,154,065...139,251,115
Ensembl chr 8:142,220,827...142,301,070
JBrowse link
G AGAP2 ArfGAP with GTPase domain, ankyrin repeat and PH domain 2 ISO (PMID:18374643) MGI PMID:18374643 NCBI chr12:31,187,821...31,201,594 JBrowse link
G AZIN1 antizyme inhibitor 1 ISO (PMID:17900240)
downregulates antizyme degradation of ODC
UniProtKB
RGD
PMID:8631929, PMID:17900240 RGD:633334 NCBI chr 8:99,483,027...99,521,151
Ensembl chr 8:101,639,950...101,678,604
JBrowse link
G AZIN2 antizyme inhibitor 2 ISO (PMID:17900240) UniProtKB PMID:17900240 NCBI chr 1:32,365,430...32,404,880
Ensembl chr 1:33,550,140...33,589,402
JBrowse link
G BANP BTG3 associated nuclear protein ISO (MGI:MGI:3579758|PMID:15701641) MGI PMID:15701641 MGI:MGI:3579758 NCBI chr16:68,626,638...68,753,293 JBrowse link
G CYP51A1 cytochrome P450 family 51 subfamily A member 1 ISO (MGI:MGI:6270905|PMID:20876579) ARUK-UCL PMID:20876579 MGI:MGI:6270905 NCBI chr 7:84,110,130...84,132,870
Ensembl chr 7:97,708,806...97,729,824
JBrowse link
G DEDD death effector domain containing ISO (MGI:MGI:5000188|PMID:21135503) MGI PMID:21135503 MGI:MGI:5000188 NCBI chr 1:136,533,756...136,545,107
Ensembl chr 1:140,447,011...140,457,876
JBrowse link
G DYSF dysferlin ISO (MGI:MGI:5433472|PMID:20724702) MGI PMID:20724702 MGI:MGI:5433472 NCBI chr2A:71,495,573...71,730,073
Ensembl chr2A:72,994,888...73,228,846
JBrowse link
G EGFR epidermal growth factor receptor ISO (PMID:17115032) UniProtKB PMID:17115032 NCBI chr 7:55,614,042...55,807,285
Ensembl chr 7:56,046,296...56,111,615
JBrowse link
G FBXO43 F-box protein 43 ISO (MGI:MGI:3663227|PMID:16966421) MGI PMID:16966421 MGI:MGI:3663227 NCBI chr 8:96,774,246...96,786,933
Ensembl chr 8:98,948,145...98,960,382
JBrowse link
G FLNA filamin A ISO (PMID:18322202) BHF-UCL PMID:18322202 NCBI chr  X:143,799,088...143,825,282 JBrowse link
G FMN2 formin 2 ISO (PMID:23375502) UniProtKB PMID:23375502 NCBI chr 1:215,626,889...216,023,590 JBrowse link
G FYN FYN proto-oncogene, Src family tyrosine kinase ISO (MGI:MGI:3775717|PMID:16841086) MGI PMID:16841086 MGI:MGI:3775717 NCBI chr 6:109,469,750...109,684,086
Ensembl chr 6:113,545,944...113,604,451
JBrowse link
G GRIN2A glutamate ionotropic receptor NMDA type subunit 2A ISO (MGI:MGI:3054180|PMID:15317856) MGI PMID:15317856 MGI:MGI:3054180 NCBI chr16:8,682,169...9,105,581
Ensembl chr16:9,919,143...10,336,167
JBrowse link
G GRIN2C glutamate ionotropic receptor NMDA type subunit 2C ISO (MGI:MGI:3054180|PMID:15317856) MGI PMID:15317856 MGI:MGI:3054180 NCBI chr17:68,787,670...68,807,192 JBrowse link
G HMGCR 3-hydroxy-3-methylglutaryl-CoA reductase ISO (MGI:MGI:6270905|PMID:20876579) ARUK-UCL PMID:20876579 MGI:MGI:6270905 NCBI chr 5:39,936,630...39,961,519
Ensembl chr 5:40,548,919...40,573,785
JBrowse link
G INS insulin ISO (PMID:15185208) UniProtKB PMID:15185208 NCBI chr11:2,200,785...2,202,579
Ensembl chr11:2,218,117...2,231,666
JBrowse link
G IRAK3 interleukin 1 receptor associated kinase 3 ISO (MGI:MGI:3843426|PMID:17379480)
(PMID:17379480), (PMID:18156187)
BHF-UCL PMID:17379480, PMID:18156187 MGI:MGI:3843426 NCBI chr12:22,661,613...22,721,203
Ensembl chr12:23,168,346...23,227,148
JBrowse link
G MAD2L1 mitotic arrest deficient 2 like 1 ISO (PMID:11459825) UniProtKB PMID:11459825 NCBI chr 4:112,247,808...112,255,202
Ensembl chr 4:123,397,355...123,405,535
JBrowse link
G MAD2L2 mitotic arrest deficient 2 like 2 ISO (PMID:11459826) UniProtKB PMID:11459826 NCBI chr 1:10,436,532...10,454,023
Ensembl chr 1:11,654,963...11,661,526
JBrowse link
G MDM4 MDM4 regulator of p53 ISO (PMID:10608892) UniProtKB PMID:10608892 NCBI chr 1:180,117,364...180,151,144
Ensembl chr 1:184,406,124...184,439,344
JBrowse link
G MYCBP2 MYC binding protein 2 ISO (MGI:MGI:3849342|PMID:19398581) MGI PMID:19398581 MGI:MGI:3849342 NCBI chr13:58,262,251...58,544,819
Ensembl chr13:77,306,509...77,586,843
JBrowse link
G NOS2 nitric oxide synthase 2 ISO (MGI:MGI:4943392|PMID:18003616) BHF-UCL PMID:18003616 MGI:MGI:4943392 NCBI chr17:28,984,295...29,021,516
Ensembl chr17:29,471,510...29,617,093
JBrowse link
G NRG1 neuregulin 1 ISO (MGI:MGI:4454957|PMID:20448149) MGI PMID:20448149 MGI:MGI:4454957 NCBI chr 8:30,954,852...32,084,411
Ensembl chr 8:29,050,222...29,263,977
JBrowse link
G PARK7 Parkinsonism associated deglycase ISO (MGI:MGI:5575789|PMID:24899725) ParkinsonsUK-UCL PMID:24899725 MGI:MGI:5575789 NCBI chr 1:6,722,260...6,745,915
Ensembl chr 1:7,969,280...7,993,271
JBrowse link
G PHB prohibitin ISO (PMID:24732013) UniProtKB PMID:24732013 NCBI chr17:8,189,555...8,200,491 JBrowse link
G PIN1 peptidylprolyl cis/trans isomerase, NIMA-interacting 1 ISO (PMID:11533658) ParkinsonsUK-UCL PMID:11533658 NCBI chr19:9,389,829...9,404,099
Ensembl chr19:10,053,254...10,066,853
JBrowse link
G PRKCG protein kinase C gamma ISO (PMID:15808853) HGNC PMID:15808853 NCBI chr19:50,823,372...50,849,003
Ensembl chr19:59,672,097...59,695,977
JBrowse link
G RELA RELA proto-oncogene, NF-kB subunit ISO (MGI:MGI:3581324|PMID:15923614) MGI PMID:15923614 MGI:MGI:3581324 NCBI chr11:61,012,839...61,022,225
Ensembl chr11:64,347,859...64,356,868
JBrowse link
G RILP Rab interacting lysosomal protein ISO (PMID:17010938) UniProtKB PMID:17010938 NCBI chr17:1,631,518...1,635,464 JBrowse link
G SERPINE2 serpin family E member 2 ISO (MGI:MGI:3654805|PMID:16319172)
(MGI:MGI:3521551|PMID:15509762)
MGI PMID:15509762, PMID:16319172 MGI:MGI:3521551, MGI:MGI:3654805 NCBI chr2B:111,221,317...111,285,491
Ensembl chr2B:229,797,655...229,861,040
JBrowse link
G SF3B3 splicing factor 3b subunit 3 ISO (PMID:23951410) CACAO PMID:23951410 NCBI chr16:54,442,510...54,490,950
Ensembl chr16:70,361,068...70,410,042
JBrowse link
G SHH sonic hedgehog signaling molecule ISO (MGI:MGI:3624046|PMID:16611981) MGI PMID:16611981 MGI:MGI:3624046 NCBI chr 7:147,400,112...147,414,036
Ensembl chr 7:159,114,666...159,126,651
JBrowse link
G SIRT2 sirtuin 2 ISO (PMID:20543840) UniProtKB PMID:20543840 NCBI chr19:35,984,453...36,005,582
Ensembl chr19:44,533,965...44,554,799
JBrowse link
G SMAD3 SMAD family member 3 ISO PMID:16690606
PMID:20097766
CACAO
BHF-UCL
PMID:16690606, PMID:20097766 RGD:11079190, RGD:15023472 NCBI chr15:46,013,764...46,143,126
Ensembl chr15:64,284,949...64,414,185
JBrowse link
G SMAD4 SMAD family member 4 ISO PMID:20097766 BHF-UCL PMID:20097766 RGD:11079190 NCBI chr18:44,402,112...44,456,779
Ensembl chr18:47,764,568...47,797,359
JBrowse link
G SNX12 sorting nexin 12 ISO (PMID:22719997) UniProtKB PMID:22719997 NCBI chr  X:60,327,484...60,336,682
Ensembl chr  X:70,384,164...70,395,737
JBrowse link
G SNX3 sorting nexin 3 ISO (PMID:18767904) UniProtKB PMID:18767904 NCBI chr 6:106,010,633...106,063,331
Ensembl chr 6:109,874,105...109,924,185
JBrowse link
G TRIM40 tripartite motif containing 40 ISO (PMID:21474709) UniProtKB PMID:21474709 NCBI chr 6:29,912,857...29,926,550
Ensembl chr 6:30,584,272...30,599,635
JBrowse link
negative regulation of cellular protein catabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATRAID all-trans retinoic acid induced differentiation factor ISO (PMID:21723284) UniProtKB PMID:21723284 NCBI chr2A:27,213,556...27,218,552
Ensembl chr2A:27,301,175...27,306,294
JBrowse link
G CDK2 cyclin dependent kinase 2 ISO (PMID:15750306) AgBase PMID:15750306 NCBI chr12:32,940,225...32,946,236
Ensembl chr12:33,189,934...33,195,945
JBrowse link
G CDK5RAP3 CDK5 regulatory subunit associated protein 3 ISO (PMID:16173922) UniProtKB PMID:16173922 NCBI chr17:9,556,313...9,567,099
Ensembl chr17:9,738,141...9,749,302
JBrowse link
G DAB2IP DAB2 interacting protein ISO (PMID:19903888) UniProtKB PMID:19903888 NCBI chr 9:92,696,798...92,912,425
Ensembl chr 9:121,143,457...121,254,336
JBrowse link
G F13B coagulation factor XIII B chain ISO (MGI:MGI:5645809|PMID:18224415) MGI PMID:18224415 MGI:MGI:5645809 NCBI chr 1:172,623,336...172,651,945
Ensembl chr 1:176,937,158...176,965,773
JBrowse link
G NELL1 neural EGFL like 1 ISO (PMID:21723284) UniProtKB PMID:21723284 NCBI chr11:20,697,153...21,600,601
Ensembl chr11:20,607,526...21,508,486
JBrowse link
G RGP1 RGP1 homolog, RAB6A GEF complex partner 1 ISO (PMID:23091056) UniProtKB PMID:23091056 NCBI chr 9:35,600,213...35,641,371
Ensembl chr 9:36,403,447...36,411,420
JBrowse link
G RIC1 RIC1 homolog, RAB6A GEF complex partner 1 ISO (PMID:23091056) UniProtKB PMID:23091056 NCBI chr 9:5,449,982...5,598,891
Ensembl chr 9:5,633,779...5,779,884
JBrowse link
negative regulation of chaperone-mediated autophagy term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CTSA cathepsin A ISO (MGI:MGI:5700310|PMID:12505983)
(PMID:12505983)
ParkinsonsUK-UCL PMID:12505983 MGI:MGI:5700310 NCBI chr20:42,229,064...42,237,627
Ensembl chr20:43,316,530...43,324,671
JBrowse link
G SNCA synuclein alpha ISO (PMID:20697033) ParkinsonsUK-UCL PMID:20697033 NCBI chr 4:82,018,585...82,132,938
Ensembl chr 4:92,737,608...92,850,600
JBrowse link
negative regulation of elastin catabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CST3 cystatin C ISO (PMID:10545518) BHF-UCL PMID:10545518 NCBI chr20:23,583,043...23,587,399
Ensembl chr20:23,935,942...23,940,425
JBrowse link
negative regulation of ER-associated ubiquitin-dependent protein catabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SGTA small glutamine rich tetratricopeptide repeat containing alpha ISO (PMID:23129660) UniProtKB PMID:23129660 NCBI chr19:1,778,728...1,808,199
Ensembl chr19:2,736,565...2,763,440
JBrowse link
G SVIP small VCP interacting protein ISO (PMID:17872946) UniProtKB PMID:17872946 NCBI chr11:22,828,321...22,837,536
Ensembl chr11:22,735,361...22,744,558
JBrowse link
G USP14 ubiquitin specific peptidase 14 ISO (PMID:19135427) ParkinsonsUK-UCL PMID:19135427 NCBI chr18:14,104,754...14,158,402
Ensembl chr18:17,745,733...17,797,070
JBrowse link
negative regulation of ERAD pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AQP11 aquaporin 11 ISO (MGI:MGI:3813160|PMID:18606867) UniProt PMID:18606867 MGI:MGI:3813160 NCBI chr11:72,653,721...72,673,698
Ensembl chr11:76,295,778...76,315,292
JBrowse link
G UBXN1 UBX domain protein 1 ISO (PMID:21135095) ParkinsonsUK-UCL PMID:21135095 NCBI chr11:58,033,304...58,035,893
Ensembl chr11:61,386,797...61,389,404
JBrowse link
G USP25 ubiquitin specific peptidase 25 ISO (PMID:22590560) ParkinsonsUK-UCL PMID:22590560 NCBI chr21:2,468,993...2,618,200
Ensembl chr21:15,724,729...15,982,182
JBrowse link
negative regulation of low-density lipoprotein particle receptor catabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ANXA2 annexin A2 ISO (PMID:22848640)
(MGI:MGI:5446858|PMID:22848640)
BHF-UCL PMID:22848640 MGI:MGI:5446858 NCBI chr15:39,322,303...39,371,565
Ensembl chr15:57,625,425...57,674,250
JBrowse link
G FURIN furin, paired basic amino acid cleaving enzyme ISO (PMID:16912035) HGNC PMID:16912035 NCBI chr15:69,560,774...69,576,007
Ensembl chr15:88,763,269...88,774,023
JBrowse link
negative regulation of lysosomal protein catabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LAPTM4B lysosomal protein transmembrane 4 beta ISO (PMID:25588945) UniProtKB PMID:25588945 NCBI chr 8:94,414,275...94,491,483 JBrowse link
G MGAT3 beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase ISO (MGI:MGI:5751042|PMID:25592972), (MGI:MGI:5816436|PMID:26467158) MGI PMID:25592972, PMID:26467158 MGI:MGI:5751042, MGI:MGI:5816436 NCBI chr22:20,363,244...20,398,471
Ensembl chr22:38,214,029...38,215,630
JBrowse link
G VPS35 VPS35 retromer complex component ISO (MGI:MGI:5694519|PMID:26203154) ParkinsonsUK-UCL PMID:26203154 MGI:MGI:5694519 NCBI chr16:26,924,901...26,954,443
Ensembl chr16:45,817,371...45,846,531
JBrowse link
negative regulation of membrane protein ectodomain proteolysis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G IL10 interleukin 10 ISO (PMID:18383040) BHF-UCL PMID:18383040 NCBI chr 1:182,369,234...182,374,207
Ensembl chr 1:186,648,289...186,653,371
JBrowse link
G PTPN3 protein tyrosine phosphatase non-receptor type 3 ISO (PMID:12207026) BHF-UCL PMID:12207026 NCBI chr 9:80,528,896...80,651,629
Ensembl chr 9:108,699,761...108,787,464
JBrowse link
G TIMP1 TIMP metallopeptidase inhibitor 1 ISO (PMID:12714508) UniProtKB PMID:12714508 NCBI chr  X:40,018,190...40,022,636
Ensembl chr  X:47,914,906...47,919,419
JBrowse link
G TIMP3 TIMP metallopeptidase inhibitor 3 ISO (PMID:18383040) BHF-UCL PMID:18383040 NCBI chr22:13,811,297...13,872,799
Ensembl chr22:31,662,562...31,723,964
JBrowse link
negative regulation of proteasomal protein catabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALAD aminolevulinate dehydratase ISO (PMID:8175643) CAFA PMID:8175643 NCBI chr 9:84,488,339...84,503,360
Ensembl chr 9:112,859,171...112,873,784
JBrowse link
G F8A1 coagulation factor VIII associated 1 ISO (PMID:27815841) UniProt PMID:27815841 NCBI chr  X:144,366,123...144,367,842 JBrowse link
G F8A2 coagulation factor VIII associated 2 ISO (PMID:27815841) UniProt PMID:27815841 NCBI chr  X:144,851,466...144,853,185 JBrowse link
G GABARAPL2 GABA type A receptor associated protein like 2 ISO (PMID:21669198) BHF-UCL PMID:21669198 NCBI chr16:56,135,482...56,147,046
Ensembl chr16:75,483,459...75,495,019
JBrowse link
G HSP90AB1 heat shock protein 90 alpha family class B member 1 ISO (MGI:MGI:6148636|PMID:17517623) ARUK-UCL PMID:17517623 MGI:MGI:6148636, RGD:13514081 NCBI chr 6:43,842,796...43,849,637
Ensembl chr 6:45,125,773...45,133,872
JBrowse link
G LAMP3 lysosomal associated membrane protein 3 ISO (PMID:25681212) ParkinsonsUK-UCL PMID:25681212 NCBI chr 3:180,152,363...180,193,223
Ensembl chr 3:188,324,660...188,363,268
JBrowse link
G LOC100988585 transmembrane protein 220 ISO (MGI:MGI:5643882|PMID:25683716) MGI PMID:25683716 MGI:MGI:5643882 NCBI chr17:40,923,397...40,973,382
Ensembl chr17:45,703,642...45,720,520
Ensembl chr17:45,703,642...45,720,520
JBrowse link
G MARCHF7 membrane associated ring-CH-type finger 7 ISO (PMID:29295817) UniProtKB PMID:29295817 NCBI chr2B:47,004,211...47,059,901
Ensembl chr2B:164,377,605...164,432,907
JBrowse link
G OPHN1 oligophrenin 1 ISO (MGI:MGI:5303043|PMID:21874017) UniProtKB PMID:21874017 MGI:MGI:5303043 NCBI chr  X:57,288,297...57,674,685
Ensembl chr  X:67,359,364...67,739,114
JBrowse link
G PRKCG protein kinase C gamma ISO (MGI:MGI:5467682|PMID:23185022) UniProtKB PMID:23185022 MGI:MGI:5467682 NCBI chr19:50,823,372...50,849,003
Ensembl chr19:59,672,097...59,695,977
JBrowse link
G PSME3IP1 proteasome activator subunit 3 interacting protein 1 ISO (PMID:29934401) UniProt PMID:29934401 NCBI chr16:37,430,698...37,464,089
Ensembl chr16:56,563,353...56,596,619
JBrowse link
G PSMF1 proteasome inhibitor subunit 1 ISO (PMID:10764772) UniProtKB PMID:10764772 NCBI chr20:1,275,662...1,325,410
Ensembl chr20:1,043,513...1,092,237
JBrowse link
G USP19 ubiquitin specific peptidase 19 ISO (MGI:MGI:5614537|PMID:25088257) ParkinsonsUK-UCL PMID:25088257 MGI:MGI:5614537 NCBI chr 3:49,032,373...49,045,238
Ensembl chr 3:50,100,216...50,125,112
JBrowse link
negative regulation of proteasomal ubiquitin-dependent protein catabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BAG5 BAG cochaperone 5 ISO (PMID:24475098) ParkinsonsUK-UCL PMID:24475098 NCBI chr14:84,182,879...84,189,180
Ensembl chr14:103,997,524...103,998,927
JBrowse link
G BAG6 BAG cochaperone 6 ISO (MGI:MGI:3808636|PMID:18678708) UniProtKB PMID:18678708 MGI:MGI:3808636 NCBI chr 6:31,300,126...31,313,829
Ensembl chr 6:32,190,037...32,204,321
JBrowse link
G CAMLG calcium modulating ligand ISO (PMID:20553626) UniProt PMID:20553626 NCBI chr 5:130,138,644...130,144,540
Ensembl chr 5:136,282,910...136,295,382
JBrowse link
G CCAR2 cell cycle and apoptosis regulator 2 ISO (PMID:23398316) UniProtKB PMID:23398316 NCBI chr 8:21,854,803...21,870,556
Ensembl chr 8:18,794,027...18,808,571
JBrowse link
G CLEC16A C-type lectin domain containing 16A ISO (MGI:MGI:5603233|PMID:24949970) MGI PMID:24949970 MGI:MGI:5603233 NCBI chr16:9,887,877...10,124,500
Ensembl chr16:11,109,869...11,343,512
JBrowse link
G DDRGK1 DDRGK domain containing 1 ISO (PMID:28263186) UniProtKB PMID:28263186 NCBI chr20:3,276,292...3,290,433
Ensembl chr20:3,038,779...3,052,789
JBrowse link
G EIF3H eukaryotic translation initiation factor 3 subunit H ISO (PMID:32269044) FlyBase PMID:32269044 NCBI chr 8:113,320,059...113,440,769
Ensembl chr 8:115,863,490...115,973,872
JBrowse link
G FHIT fragile histidine triad diadenosine triphosphatase ISO (PMID:15313915) UniProtKB PMID:15313915 NCBI chr 3:59,670,777...61,177,974 JBrowse link
G GIPC1 GIPC PDZ domain containing family member 1 ISO (MGI:MGI:3807767|PMID:11546783) BHF-UCL PMID:11546783 MGI:MGI:3807767 NCBI chr19:14,041,192...14,059,402
Ensembl chr19:14,885,185...14,889,701
JBrowse link
G HSP90AB1 heat shock protein 90 alpha family class B member 1 ISO (PMID:24613385)
(PMID:16280321)
UniProtKB
MGI
PMID:16280321, PMID:24613385 NCBI chr 6:43,842,796...43,849,637
Ensembl chr 6:45,125,773...45,133,872
JBrowse link
G KLHL40 kelch like family member 40 ISO (MGI:MGI:5586592|PMID:24960163) MGI PMID:24960163 MGI:MGI:5586592 NCBI chr 3:42,592,977...42,600,100
Ensembl chr 3:43,657,128...43,664,055
JBrowse link
G MAP1A microtubule associated protein 1A ISO (MGI:MGI:5703671|PMID:26609151) ARUK-UCL PMID:26609151 MGI:MGI:5703671 NCBI chr15:22,472,641...22,493,293
Ensembl chr15:40,627,099...40,647,752
JBrowse link
G MTM1 myotubularin 1 ISO (MGI:MGI:5510937|PMID:23695157) MGI PMID:23695157 MGI:MGI:5510937 NCBI chr  X:140,218,742...140,323,495
Ensembl chr  X:150,174,758...150,255,381
JBrowse link
G N4BP1 NEDD4 binding protein 1 ISO (MGI:MGI:3829128|PMID:17592138) UniProtKB PMID:17592138 MGI:MGI:3829128 NCBI chr16:28,809,881...28,881,352
Ensembl chr16:47,698,353...47,769,755
JBrowse link
G NOP53 NOP53 ribosome biogenesis factor ISO (PMID:22522597) UniProtKB PMID:22522597 NCBI chr19:44,739,739...44,751,303 JBrowse link
G OGT O-linked N-acetylglucosamine (GlcNAc) transferase ISO (PMID:26678539) UniProtKB PMID:26678539 NCBI chr  X:60,798,219...60,840,948
Ensembl chr  X:70,852,687...70,894,921
JBrowse link
G PANO1 proapoptotic nucleolar protein 1 ISO (PMID:22094112) UniProtKB PMID:22094112 NCBI chr11:814,040...816,633 JBrowse link
G PARK7 Parkinsonism associated deglycase ISO (PMID:17015834) ParkinsonsUK-UCL PMID:17015834 NCBI chr 1:6,722,260...6,745,915
Ensembl chr 1:7,969,280...7,993,271
JBrowse link
G PBK PDZ binding kinase ISO (MGI:MGI:5293269|PMID:21715333) MGI PMID:21715333 MGI:MGI:5293269 NCBI chr 8:27,084,789...27,112,986
Ensembl chr 8:24,285,395...24,313,658
JBrowse link
G RPL11 ribosomal protein L11 ISO (MGI:MGI:5897550|PMID:21804542) UniProtKB PMID:21804542 MGI:MGI:5897550 NCBI chr 1:22,883,157...22,887,806
Ensembl chr 1:23,868,688...23,873,313
JBrowse link
G RYBP RING1 and YY1 binding protein ISO (PMID:27060496) UniProtKB PMID:27060496 NCBI chr 3:72,315,494...72,389,328
Ensembl chr 3:74,247,807...74,318,398
JBrowse link
G SDCBP syndecan binding protein ISO (PMID:25893292) UniProtKB PMID:25893292 NCBI chr 8:54,992,627...55,022,560
Ensembl chr 8:56,643,962...56,673,833
JBrowse link
G SENP1 SUMO specific peptidase 1 ISO (MGI:MGI:3818351|PMID:17981124) MGI PMID:17981124 MGI:MGI:3818351 NCBI chr12:40,624,200...40,689,837
Ensembl chr12:41,507,348...41,558,969
JBrowse link
G SHH sonic hedgehog signaling molecule ISO (MGI:MGI:3624046|PMID:16611981) MGI PMID:16611981 MGI:MGI:3624046 NCBI chr 7:147,400,112...147,414,036
Ensembl chr 7:159,114,666...159,126,651
JBrowse link
G SMARCC1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1 ISO (MGI:MGI:5310666|PMID:22285184) MGI PMID:22285184 MGI:MGI:5310666 NCBI chr 3:47,487,948...47,683,623
Ensembl chr 3:48,590,221...48,781,248
JBrowse link
G TAF9 TATA-box binding protein associated factor 9 ISO (PMID:11278372) BHF-UCL PMID:11278372 NCBI chr 5:44,630,503...44,635,760 JBrowse link
G TLK2 tousled like kinase 2 ISO (PMID:20016786) UniProtKB PMID:20016786 NCBI chr17:56,542,670...56,678,294
Ensembl chr17:61,689,998...61,830,394
JBrowse link
G TRIM39 tripartite motif containing 39 ISO (PMID:23213251) UniProt PMID:23213251 NCBI chr 6:30,104,381...30,121,649
Ensembl chr 6:30,975,260...30,995,764
JBrowse link
G TTC36 tetratricopeptide repeat domain 36 ISO (MGI:MGI:6362140|PMID:31537781) MGI PMID:31537781 MGI:MGI:6362140 NCBI chr11:113,364,559...113,368,586
Ensembl chr11:117,295,191...117,298,928
JBrowse link
G UBXN1 UBX domain protein 1 ISO (PMID:20351172) UniProtKB PMID:20351172 NCBI chr11:58,033,304...58,035,893
Ensembl chr11:61,386,797...61,389,404
JBrowse link
G UCHL5 ubiquitin C-terminal hydrolase L5 ISO (PMID:23770237) UniProtKB PMID:23770237 NCBI chr 1:168,471,501...168,519,366
Ensembl chr 1:172,764,606...172,811,880
JBrowse link
G USP7 ubiquitin specific peptidase 7 ISO (PMID:26678539) UniProtKB PMID:26678539 NCBI chr16:7,825,332...7,895,095
Ensembl chr16:9,065,858...9,106,146
JBrowse link
G WAC WW domain containing adaptor with coiled-coil ISO (PMID:22354037) BHF-UCL PMID:22354037 NCBI chr10:28,685,294...28,777,176
Ensembl chr10:29,042,331...29,130,591
JBrowse link
negative regulation of proteolysis involved in cellular protein catabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CDKN2A cyclin dependent kinase inhibitor 2A ISO (MGI:MGI:5468878|PMID:23277542)
(PMID:25217637)
MGI
ParkinsonsUK-UCL
PMID:23277542, PMID:25217637 MGI:MGI:5468878 NCBI chr 9:21,803,862...21,831,322 JBrowse link
G EFNA1 ephrin A1 ISO (PMID:24217950) ARUK-UCL PMID:24217950 NCBI chr 1:130,475,128...130,482,531
Ensembl chr 1:134,083,855...134,091,228
JBrowse link
G EPHA4 EPH receptor A4 ISO (PMID:24217950) ARUK-UCL PMID:24217950 NCBI chr2B:108,664,475...108,818,802
Ensembl chr2B:227,248,958...227,402,790
JBrowse link
negative regulation of SCF-dependent proteasomal ubiquitin-dependent catabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G STYX serine/threonine/tyrosine interacting protein ISO (PMID:28007894) UniProtKB PMID:28007894 NCBI chr14:33,326,587...33,371,399
Ensembl chr14:51,610,523...51,651,096
JBrowse link
negative regulation of ubiquitin-dependent protein catabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ANKS1A ankyrin repeat and sterile alpha motif domain containing 1A ISO (MGI:MGI:4461099|PMID:20100865) MGI PMID:20100865 MGI:MGI:4461099 NCBI chr 6:34,450,695...34,653,881
Ensembl chr 6:35,548,124...35,776,185
JBrowse link
G CDKN2A cyclin dependent kinase inhibitor 2A ISO (MGI:MGI:5468878|PMID:23277542)
(PMID:16173922), (PMID:18560357)
MGI
CAFA
PMID:16173922, PMID:18560357, PMID:23277542 MGI:MGI:5468878 NCBI chr 9:21,803,862...21,831,322 JBrowse link
G CSNK2A1 casein kinase 2 alpha 1 ISO (PMID:28031292) ARUK-UCL PMID:28031292 NCBI chr20:689,494...752,092
Ensembl chr20:456,629...521,126
JBrowse link
G CSNK2A2 casein kinase 2 alpha 2 ISO (PMID:28031292) ARUK-UCL PMID:28031292 NCBI chr16:38,426,399...38,466,575
Ensembl chr16:57,557,270...57,596,218
JBrowse link
G HFE homeostatic iron regulator ISO (PMID:24904118) BHF-UCL PMID:24904118 NCBI chr 6:25,921,663...25,930,852
Ensembl chr 6:26,580,358...26,588,591
JBrowse link
G HIPK2 homeodomain interacting protein kinase 2 ISO (PMID:21628596) FlyBase PMID:21628596 NCBI chr 7:131,506,711...131,722,943 JBrowse link
G PDCL3 phosducin like 3 ISO (PMID:23792958) MGI PMID:23792958
G PML PML nuclear body scaffold ISO (PMID:15195100) UniProtKB PMID:15195100 NCBI chr15:52,903,874...52,955,151
Ensembl chr15:71,658,884...71,710,883
JBrowse link
G PSEN1 presenilin 1 ISO (MGI:MGI:4887523|PMID:20208556) BHF-UCL PMID:20208556 MGI:MGI:4887523 NCBI chr14:53,718,299...53,802,684
Ensembl chr14:72,579,024...72,663,876
JBrowse link
G PSEN2 presenilin 2 ISO (MGI:MGI:4887523|PMID:20208556) BHF-UCL PMID:20208556 MGI:MGI:4887523 NCBI chr 1:202,328,987...202,354,440
Ensembl chr 1:207,320,937...207,346,295
JBrowse link
G QRICH2 glutamine rich 2 ISO (PMID:30683861)
(MGI:MGI:6277293|PMID:30683861)
UniProt PMID:30683861 MGI:MGI:6277293 NCBI chr17:70,222,033...70,256,747
Ensembl chr17:75,774,651...75,807,651
JBrowse link
G RPL11 ribosomal protein L11 ISO (PMID:18560357) CAFA PMID:18560357 NCBI chr 1:22,883,157...22,887,806
Ensembl chr 1:23,868,688...23,873,313
JBrowse link
G RPL23 ribosomal protein L23 ISO (PMID:15314173) CAFA PMID:15314173 NCBI chr17:18,417,964...18,421,708
Ensembl chr17:18,690,682...18,698,253
JBrowse link
G RPL5 ribosomal protein L5 ISO (PMID:18560357) CAFA PMID:18560357 NCBI chr 1:95,497,047...95,507,006
Ensembl chr 1:94,230,451...94,241,522
JBrowse link
G RPS7 ribosomal protein S7 ISO (PMID:17310983) CAFA PMID:17310983 NCBI chr2A:3,593,350...3,599,106 JBrowse link
G SGTA small glutamine rich tetratricopeptide repeat containing alpha ISO (PMID:23129660) UniProtKB PMID:23129660 NCBI chr19:1,778,728...1,808,199
Ensembl chr19:2,736,565...2,763,440
JBrowse link
G SUFU SUFU negative regulator of hedgehog signaling ISO (MGI:MGI:4355593|PMID:19684112) MGI PMID:19684112 MGI:MGI:4355593 NCBI chr10:99,107,516...99,231,761
Ensembl chr10:102,571,886...102,696,472
JBrowse link
G TAF1 TATA-box binding protein associated factor 1 ISO (PMID:17237821) ParkinsonsUK-UCL PMID:17237821 NCBI chr  X:60,630,137...60,729,904
Ensembl chr  X:70,684,217...70,782,323
JBrowse link
G TRIM39 tripartite motif containing 39 ISO (PMID:19100260) BHF-UCL PMID:19100260 NCBI chr 6:30,104,381...30,121,649
Ensembl chr 6:30,975,260...30,995,764
JBrowse link
G WNT1 Wnt family member 1 ISO (MGI:MGI:3628833|PMID:16601693) MGI PMID:16601693 MGI:MGI:3628833 NCBI chr12:39,767,839...39,772,460
Ensembl chr12:40,648,413...40,652,583
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 12564
    metabolic process 7979
      catabolic process 1707
        negative regulation of catabolic process 307
          negative regulation of protein catabolic process 126
            negative regulation of cellular protein catabolic process + 83
            negative regulation of chaperone-mediated autophagy 2
            negative regulation of elastin catabolic process 1
            negative regulation of membrane protein ectodomain proteolysis 4
Path 2
Term Annotations click to browse term
  biological_process 12564
    metabolic process 7979
      organic substance metabolic process 7672
        macromolecule metabolic process 6628
          macromolecule catabolic process 961
            protein catabolic process 696
              regulation of protein catabolic process 363
                negative regulation of protein catabolic process 126
                  negative regulation of cellular protein catabolic process + 83
                  negative regulation of chaperone-mediated autophagy 2
                  negative regulation of elastin catabolic process 1
                  negative regulation of membrane protein ectodomain proteolysis 4
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.