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ONTOLOGY REPORT - ANNOTATIONS


Term:lipoprotein metabolic process
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Accession:GO:0042157 term browser browse the term
Definition:The chemical reactions and pathways involving any conjugated, water-soluble protein in which the covalently attached nonprotein group consists of a lipid or lipids.
Synonyms:exact_synonym: lipoprotein metabolism


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lipoprotein metabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07041779.2 IEA GO_REF:0000002 InterPro GO_REF:0000002 Ensembl chr  X:139,780,386...139,783,075 JBrowse link
G AABR07058464.1 IEA GO_REF:0000002 InterPro GO_REF:0000002 Ensembl chr 7:118,473,070...118,474,609 JBrowse link
G Abca1 ATP binding cassette subfamily A member 1 ISO MGI:1935192 (MGI:3056863|PMID:15269218) RGD PMID:15269218 MGI:3056863 NCBI chr 5:69,857,717...69,983,042
Ensembl chr 5:69,857,771...69,983,015
JBrowse link
G Apoa1 apolipoprotein A1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:50,525,091...50,526,875
Ensembl chr 8:50,525,091...50,526,875
JBrowse link
G Apoa2 apolipoprotein A2 IBA
ISO
PMID:21873635
(MGI:70383|PMID:7837794), (MGI:87210|PMID:9150245)
RGD PMID:7837794, PMID:9150245, PMID:21873635 MGI:70383, MGI:87210, RGD:13792537 NCBI chr13:89,596,872...89,598,805
Ensembl chr13:89,597,138...89,598,802
JBrowse link
G Apoa4 apolipoprotein A4 IEA
IBA
GO_REF:0000002
PMID:21873635
InterPro PMID:21873635 GO_REF:0000002, RGD:13792537 NCBI chr 8:50,536,983...50,539,371
Ensembl chr 8:50,537,009...50,539,376
JBrowse link
G Apoa5 apolipoprotein A5 IEA
IBA
GO_REF:0000002
PMID:21873635
InterPro PMID:21873635 GO_REF:0000002, RGD:13792537 NCBI chr 8:50,559,079...50,561,720
Ensembl chr 8:50,559,126...50,561,736
JBrowse link
G Apob apolipoprotein B ISO MGI:1857303|MGI:1857625|MGI:2157108|MGI:3665449|MGI:88057|MGI:96765 (MGI:1316893|PMID:9852051), (MGI:1354526|PMID:10713055), (MGI:1928445|PMID:11120757), (MGI:3028770|PMID:13130124), (MGI:3664699|PMID:10705993), (MGI:71076|PMID:7878058) RGD PMID:7878058, PMID:9852051, PMID:10705993, PMID:10713055, PMID:11120757, PMID:13130124 MGI:1316893, MGI:1354526, MGI:1928445, MGI:3028770, MGI:3664699, MGI:71076 NCBI chr 6:33,176,826...33,216,381
Ensembl chr 6:33,176,778...33,224,997
JBrowse link
G Apobec1 apolipoprotein B mRNA editing enzyme catalytic subunit 1 ISO MGI:2157378 (MGI:2157316|PMID:8692961) RGD PMID:8692961 MGI:2157316 NCBI chr 4:155,386,367...155,414,034
Ensembl chr 4:155,386,711...155,401,480
JBrowse link
G Apoc1 apolipoprotein C1 TAS
IEA
GO_REF:0000002 InterPro PMID:10073946 GO_REF:0000002, RGD:1578471 NCBI chr 1:80,606,638...80,609,921
Ensembl chr 1:80,606,638...80,609,921
JBrowse link
G Apoc3 apolipoprotein C3 IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 8:50,529,318...50,531,498
Ensembl chr 8:50,529,318...50,531,498
JBrowse link
G Apoe apolipoprotein E IDA
ISO
MGI:1857129|MGI:88052 (MGI:1313233|PMID:9788969), (MGI:1928445|PMID:11120757), (MGI:3028770|PMID:13130124) RGD PMID:9788969, PMID:11120757, PMID:13130124, PMID:2492020 MGI:1313233, MGI:1928445, MGI:3028770, RGD:1626397 NCBI chr 1:80,612,894...80,616,820
Ensembl chr 1:80,612,895...80,617,057
JBrowse link
G Apol11a apolipoprotein L 11a IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 7:118,835,316...118,858,347
Ensembl chr 7:118,836,547...118,840,634
JBrowse link
G Apol2 apolipoprotein L, 2 IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 7:118,727,658...118,735,453
Ensembl chr 7:118,728,617...118,732,738
JBrowse link
G Apol3 apolipoprotein L, 3 IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 7:118,685,022...118,694,016
Ensembl chr 7:118,685,022...118,694,015
JBrowse link
G Apol9a apolipoprotein L 9a IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 7:118,927,013...118,933,778
Ensembl chr 7:118,927,008...118,933,812
JBrowse link
G Apold1 apolipoprotein L domain containing 1 IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 4:168,752,142...168,755,024
Ensembl chr 4:168,752,133...168,755,023
JBrowse link
G Apom apolipoprotein M ISO (MGI:3575626|PMID:15793583) RGD PMID:15793583 MGI:3575626 NCBI chr20:5,120,473...5,123,073
Ensembl chr20:5,120,474...5,123,073
JBrowse link
G Lcat lecithin cholesterol acyltransferase IDA RGD PMID:3918579 RGD:1581794 NCBI chr19:37,913,333...37,916,799
Ensembl chr19:37,913,336...37,916,813
JBrowse link
G Ldlr low density lipoprotein receptor ISO MGI:88052 (MGI:1928445|PMID:11120757), (MGI:3028770|PMID:13130124) RGD PMID:11120757, PMID:13130124 MGI:1928445, MGI:3028770 NCBI chr 8:22,750,425...22,773,305
Ensembl chr 8:22,750,336...22,774,903
JBrowse link
G LOC100910181 apolipoprotein C-I-like IEA GO_REF:0000002 InterPro GO_REF:0000002
G LOC100911562 apolipoprotein L3-like IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 7:118,959,589...118,970,022
Ensembl chr 7:118,692,851...118,719,156
Ensembl chr 7:118,692,851...118,719,156
JBrowse link
G LOC100911804 apolipoprotein L3-like IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 7:118,979,230...118,986,699
Ensembl chr 7:118,979,608...118,983,984
JBrowse link
G Lrp1 LDL receptor related protein 1 IEP RGD PMID:10778874 RGD:1625018 NCBI chr 7:70,846,313...70,927,028
Ensembl chr 7:70,846,344...70,926,903
JBrowse link
G Mttp microsomal triglyceride transfer protein IDA
ISO
IBA
MGI:2152201 (MGI:1354526|PMID:10713055)
PMID:21873635
RGD PMID:10713055, PMID:11830580, PMID:21873635 MGI:1354526, RGD:1582567, RGD:13792537 NCBI chr 2:243,366,181...243,407,608
Ensembl chr 2:243,366,181...243,407,608
JBrowse link
G Npc1l1 NPC1 like intracellular cholesterol transporter 1 ISO (PMID:17140581) RGD PMID:17140581 NCBI chr14:86,345,946...86,560,694
Ensembl chr14:86,345,953...86,560,694
JBrowse link
G Olr1 oxidized low density lipoprotein receptor 1 IMP
IBA
PMID:21873635 RGD
GO_Central
PMID:12435393, PMID:21873635 RGD:633387, RGD:13792537 NCBI chr 4:163,239,853...163,261,937
Ensembl chr 4:163,239,849...163,261,958
JBrowse link
G Pcsk9 proprotein convertase subtilisin/kexin type 9 ISO (MGI:3710922|PMID:17242417) RGD PMID:17242417 MGI:3710922 NCBI chr 5:126,031,368...126,053,726
Ensembl chr 5:126,031,368...126,053,726
JBrowse link
G Ppara peroxisome proliferator activated receptor alpha IMP RGD PMID:15537571 RGD:1580223 NCBI chr 7:126,618,872...126,687,282
Ensembl chr 7:126,619,196...126,681,752
JBrowse link
G RGD1309808 similar to apolipoprotein L2; apolipoprotein L-II IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 7:118,700,952...118,719,160
Ensembl chr 7:118,692,851...118,719,156
JBrowse link
attachment of GPI anchor to protein term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gpaa1 glycosylphosphatidylinositol anchor attachment 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:117,394,367...117,397,950
Ensembl chr 7:117,394,372...117,397,956
JBrowse link
G Pigk phosphatidylinositol glycan anchor biosynthesis, class K IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:257,911,099...257,997,735
Ensembl chr 2:257,911,126...257,997,733
JBrowse link
G Pigs phosphatidylinositol glycan anchor biosynthesis, class S ISO (MGI:3688056|PMID:11483512) RGD PMID:11483512 MGI:3688056 NCBI chr10:65,591,638...65,606,175
Ensembl chr10:65,591,622...65,606,202
JBrowse link
G Pigt phosphatidylinositol glycan anchor biosynthesis, class T IBA
ISO
PMID:21873635
(MGI:3688056|PMID:11483512)
RGD PMID:11483512, PMID:21873635 MGI:3688056, RGD:13792537 NCBI chr 3:160,945,556...160,954,738
Ensembl chr 3:160,945,359...160,954,739
JBrowse link
G Pigu phosphatidylinositol glycan anchor biosynthesis, class U IEA
IBA
ISO
GO_REF:0000107
PMID:21873635
(PMID:12802054)
GO_REF:0000002
Ensembl
RGD
InterPro
PMID:12802054, PMID:21873635 GO_REF:0000002, GO_REF:0000107, RGD:13792537 NCBI chr 3:150,803,096...150,885,597
Ensembl chr 3:150,803,097...150,885,616
JBrowse link
C-terminal protein lipidation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atg12 autophagy related 12 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr18:40,721,799...40,732,143
Ensembl chr18:40,721,800...40,732,126
JBrowse link
G Atg5 autophagy related 5 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr20:49,301,783...49,393,147
Ensembl chr20:49,318,308...49,393,140
JBrowse link
G Atg7 autophagy related 7 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:146,570,113...146,777,093
Ensembl chr 4:146,598,413...146,777,124
JBrowse link
GPI anchor biosynthetic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cwh43 cell wall biogenesis 43 C-terminal homolog IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:37,315,479...37,361,728
Ensembl chr14:37,315,406...37,361,798
JBrowse link
G Dpm1 dolichyl-phosphate mannosyltransferase subunit 1, catalytic ISO
IBA
(PMID:10835346), (PMID:9535917), (PMID:9724629)
(MGI:1329093|PMID:9535917)
PMID:21873635
RGD PMID:9535917, PMID:9724629, PMID:10835346, PMID:21873635 MGI:1329093, RGD:13792537 NCBI chr 3:164,966,637...164,986,180
Ensembl chr 3:164,966,637...164,986,180
JBrowse link
G Dpm2 dolichyl-phosphate mannosyltransferase subunit 2, regulatory TAS
ISO
IBA
IEA
IDA
(PMID:10835346), (PMID:16162815)
PMID:21873635
GO_REF:0000107
PMID:9724629
RGD
Ensembl
PMID:10835346, PMID:16162815, PMID:9724629, PMID:21873635, PMID:9724629 GO_REF:0000107, RGD:69827, RGD:13792537, RGD:69827 NCBI chr 3:11,587,941...11,590,528
Ensembl chr 3:11,587,941...11,590,528
JBrowse link
G Dpm3 dolichyl-phosphate mannosyltransferase subunit 3, regulatory ISO
IBA
(PMID:10835346)
PMID:21873635
RGD PMID:10835346, PMID:21873635 RGD:13792537 NCBI chr 2:188,583,664...188,584,179
Ensembl chr 2:188,583,664...188,584,179
JBrowse link
G Gpaa1 glycosylphosphatidylinositol anchor attachment 1 TAS RGD PMID:10702226 RGD:1331364 NCBI chr 7:117,394,367...117,397,950
Ensembl chr 7:117,394,372...117,397,956
JBrowse link
G LOC100910143 GPI ethanolamine phosphate transferase 2-like IBA
IEA
PMID:21873635
GO_REF:0000041
UniProt PMID:21873635 GO_REF:0000041, RGD:13792537 NCBI chr14:1,567,713...1,596,004
Ensembl chr14:2,410,342...2,438,592
Ensembl chr14:2,410,342...2,438,592
JBrowse link
G LOC103694910 GPI mannosyltransferase 1 IEA
IBA
GO_REF:0000041
PMID:21873635
UniProt PMID:21873635 GO_REF:0000041, RGD:13792537
G Mppe1 metallophosphoesterase 1 ISS
ISO
GO_REF:0000024
(PMID:29374258)
UniProt
RGD
PMID:29374258 GO_REF:0000024 NCBI chr18:62,946,952...62,966,174
Ensembl chr18:62,946,953...62,965,538
JBrowse link
G Pgap1 post-GPI attachment to proteins inositol deacylase 1 IMP RGD PMID:14734546 RGD:1303970 NCBI chr 9:61,066,170...61,134,963
Ensembl chr 9:61,066,175...61,134,963
JBrowse link
G Pgap2 post-GPI attachment to proteins 2 IMP
IBA
ISO
IEA
PMID:16407401
PMID:21873635
(PMID:29374258)
GO_REF:0000107
RGD
Ensembl
PMID:29374258, PMID:16407401, PMID:21873635 GO_REF:0000107, RGD:8553507, RGD:13792537 NCBI chr 1:167,309,021...167,335,550
Ensembl chr 1:167,309,051...167,334,741
JBrowse link
G Pgap3 post-GPI attachment to proteins phospholipase 3 ISO
IBA
(PMID:29374258)
PMID:21873635
RGD PMID:29374258, PMID:21873635 RGD:13792537 NCBI chr10:86,343,058...86,356,146
Ensembl chr10:86,343,064...86,355,006
JBrowse link
G Pgap4 post-GPI attachment to proteins GalNAc transferase 4 ISS
ISO
GO_REF:0000024
(PMID:29374258)
UniProt
RGD
PMID:29374258 GO_REF:0000024 NCBI chr 5:64,848,657...64,867,925
Ensembl chr 5:64,848,658...64,850,427
JBrowse link
G Piga phosphatidylinositol glycan anchor biosynthesis, class A IBA
ISO
IEA
PMID:21873635
MGI:3652879 (MGI:80283|PMID:8611683)
GO_REF:0000041
RGD
UniProt
PMID:8611683, PMID:21873635 GO_REF:0000041, MGI:80283, RGD:13792537 NCBI chr  X:31,786,823...31,799,751
Ensembl chr  X:31,786,194...31,799,560
JBrowse link
G Pigb phosphatidylinositol glycan anchor biosynthesis, class B ISO
IBA
(PMID:8861954)
PMID:21873635
RGD PMID:8861954, PMID:21873635 RGD:13792537 NCBI chr 8:79,691,407...79,715,284
Ensembl chr 8:79,691,407...79,715,284
JBrowse link
G Pigc phosphatidylinositol glycan anchor biosynthesis, class C IEA
ISS
ISO
GO_REF:0000041
GO_REF:0000024
(PMID:16162815), (PMID:27694521)
UniProt
RGD
PMID:16162815, PMID:27694521 GO_REF:0000024, GO_REF:0000041 NCBI chr13:79,886,832...79,889,305
Ensembl chr13:79,886,832...79,889,304
JBrowse link
G Pigf phosphatidylinositol glycan anchor biosynthesis, class F IBA
ISO
IEA
PMID:21873635
(MGI:1860649|PMID:10781593)
GO_REF:0000041
RGD
UniProt
PMID:10781593, PMID:21873635 GO_REF:0000041, MGI:1860649, RGD:13792537 NCBI chr 6:10,565,841...10,593,972
Ensembl chr 6:10,568,614...10,592,454
JBrowse link
G Pigg phosphatidylinositol glycan anchor biosynthesis, class G ISO
IEA
IBA
(PMID:15632136)
GO_REF:0000041
PMID:21873635
RGD
UniProt
PMID:15632136, PMID:21873635 GO_REF:0000041, RGD:13792537 NCBI chr14:2,410,339...2,438,630
Ensembl chr14:2,410,342...2,438,592
JBrowse link
G Pigh phosphatidylinositol glycan anchor biosynthesis, class H IBA
ISO
IEA
PMID:21873635
(PMID:16162815)
GO_REF:0000041
RGD
UniProt
PMID:16162815, PMID:21873635 GO_REF:0000041, RGD:13792537 NCBI chr 6:102,258,621...102,272,826
Ensembl chr 6:102,263,337...102,272,777
JBrowse link
G Pigl phosphatidylinositol glycan anchor biosynthesis, class L IDA
IBA
IEA
PMID:21873635
GO_REF:0000041
UniProt PMID:9188481, PMID:21873635 GO_REF:0000041, RGD:729509, RGD:13792537 NCBI chr10:48,774,018...48,831,848
Ensembl chr10:48,773,828...48,831,855
JBrowse link
G Pigm phosphatidylinositol glycan anchor biosynthesis, class M IDA
IBA
IEA
PMID:21873635
GO_REF:0000041
UniProt PMID:11226175, PMID:21873635 GO_REF:0000041, RGD:70624, RGD:13792537 NCBI chr13:90,759,260...90,762,957
Ensembl chr13:90,759,260...90,762,957
JBrowse link
G Pign phosphatidylinositol glycan anchor biosynthesis, class N IBA
IEA
PMID:21873635
GO_REF:0000041
UniProt PMID:21873635 GO_REF:0000041, RGD:13792537 NCBI chr13:25,510,593...25,662,943
Ensembl chr13:25,513,892...25,652,473
JBrowse link
G Pigo phosphatidylinositol glycan anchor biosynthesis, class O IBA
ISO
IEA
PMID:21873635
(MGI:1860649|PMID:10781593)
GO_REF:0000041
RGD
UniProt
PMID:10781593, PMID:21873635 GO_REF:0000041, MGI:1860649, RGD:13792537 NCBI chr 5:58,461,055...58,470,699
Ensembl chr 5:58,461,759...58,469,399
JBrowse link
G Pigp phosphatidylinositol glycan anchor biosynthesis, class P IEA
ISO
GO_REF:0000041
(MGI:3804747|PMID:10944123)
(PMID:16162815), (PMID:28334793)
UniProt
RGD
PMID:10944123, PMID:16162815, PMID:28334793 GO_REF:0000041, MGI:3804747 NCBI chr11:34,592,128...34,598,253
Ensembl chr11:34,592,121...34,598,275
JBrowse link
G Pigq phosphatidylinositol glycan anchor biosynthesis, class Q ISO (PMID:16162815)
PomBase:SPBC30D10.11|SGD:S000003448 (MGI:1307040|PMID:9729469), (MGI:1339481|PMID:10373468)
RGD PMID:9729469, PMID:10373468, PMID:16162815 MGI:1307040, MGI:1339481 NCBI chr10:15,289,530...15,305,593
Ensembl chr10:15,289,536...15,305,549
JBrowse link
G Pigu phosphatidylinositol glycan anchor biosynthesis, class U ISO (PMID:15034568) RGD PMID:15034568 NCBI chr 3:150,803,096...150,885,597
Ensembl chr 3:150,803,097...150,885,616
JBrowse link
G Pigv phosphatidylinositol glycan anchor biosynthesis, class V IEA
IBA
ISO
GO_REF:0000041
PMID:21873635
UniProtKB:P38211 (PMID:15623507), (PMID:15720390)
UniProt
RGD
PMID:15623507, PMID:15720390, PMID:21873635 GO_REF:0000041, RGD:13792537 NCBI chr 5:151,886,132...151,899,024
Ensembl chr 5:151,886,035...151,898,022
JBrowse link
G Pigw phosphatidylinositol glycan anchor biosynthesis, class W IEA
IBA
GO_REF:0000041
PMID:21873635
UniProt PMID:21873635 GO_REF:0000041, RGD:13792537 NCBI chr10:72,194,774...72,198,415
Ensembl chr10:72,194,929...72,196,437
JBrowse link
G Pigx phosphatidylinositol glycan anchor biosynthesis, class X IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr11:71,938,388...71,954,225
Ensembl chr11:71,938,388...71,954,224
JBrowse link
G Pigy phosphatidylinositol glycan anchor biosynthesis, class Y ISO
IBA
(PMID:16162815)
PMID:21873635
RGD PMID:16162815, PMID:21873635 RGD:13792537 NCBI chr 8:23,167,974...23,170,215
Ensembl chr 8:23,167,974...23,170,209
JBrowse link
G Pigz phosphatidylinositol glycan anchor biosynthesis, class Z ISO
IBA
UniProtKB:Q04174 (PMID:15208306)
PMID:21873635
RGD PMID:15208306, PMID:21873635 RGD:13792537 NCBI chr11:72,930,040...72,936,002
Ensembl chr11:72,931,297...72,934,823
Ensembl chr11:72,931,297...72,934,823
JBrowse link
G Pyurf PIGY upstream reading frame ISO
IBA
ISS
(PMID:16162815)
PMID:21873635
GO_REF:0000024
RGD
HGNC
PMID:16162815, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 4:88,584,242...88,587,877
Ensembl chr 4:88,584,242...88,587,877
JBrowse link
lipoprotein biosynthetic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca1 ATP binding cassette subfamily A member 1 IMP
ISO
IEP
MGI:1935192 (MGI:2668299|PMID:12859204), (MGI:3522380|PMID:15520446) RGD PMID:12859204, PMID:15520446, PMID:14993246, PMID:21554872 MGI:2668299, MGI:3522380, RGD:1358264, RGD:21408554 NCBI chr 5:69,857,717...69,983,042
Ensembl chr 5:69,857,771...69,983,015
JBrowse link
G Apoa1 apolipoprotein A1 ISO MGI:1857127|MGI:88057 (MGI:3616112|PMID:16245952), (MGI:3709144|PMID:14595002) RGD PMID:14595002, PMID:16245952 MGI:3616112, MGI:3709144 NCBI chr 8:50,525,091...50,526,875
Ensembl chr 8:50,525,091...50,526,875
JBrowse link
G Apob apolipoprotein B ISO MGI:103298 (MGI:3028770|PMID:13130124) RGD PMID:13130124 MGI:3028770 NCBI chr 6:33,176,826...33,216,381
Ensembl chr 6:33,176,778...33,224,997
JBrowse link
G Apobec1 apolipoprotein B mRNA editing enzyme catalytic subunit 1 ISO MGI:88052 (MGI:3028770|PMID:13130124) RGD PMID:13130124 MGI:3028770 NCBI chr 4:155,386,367...155,414,034
Ensembl chr 4:155,386,711...155,401,480
JBrowse link
G Apoe apolipoprotein E ISS
ISO
IEA
GO_REF:0000024
MGI:88049 (MGI:3709144|PMID:14595002)
(PMID:23620513)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:14595002, PMID:23620513 GO_REF:0000024, GO_REF:0000107, MGI:3709144 NCBI chr 1:80,612,894...80,616,820
Ensembl chr 1:80,612,895...80,617,057
JBrowse link
G Ins2 insulin 2 ISO (PMID:8069456) RGD PMID:8069456 NCBI chr 1:215,856,967...215,858,034
Ensembl chr 1:215,856,971...215,858,034
JBrowse link
G Lcat lecithin cholesterol acyltransferase ISO (MGI:3616112|PMID:16245952) RGD PMID:16245952 MGI:3616112 NCBI chr19:37,913,333...37,916,799
Ensembl chr19:37,913,336...37,916,813
JBrowse link
lipoprotein catabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apob apolipoprotein B ISO MGI:107202 (MGI:3588634|PMID:15863839) RGD PMID:15863839 MGI:3588634 NCBI chr 6:33,176,826...33,216,381
Ensembl chr 6:33,176,778...33,224,997
JBrowse link
G Apoe apolipoprotein E IBA
ISO
PMID:21873635
MGI:1857303 (MGI:3770508|PMID:17720994)
RGD PMID:17720994, PMID:21873635 MGI:3770508, RGD:13792537 NCBI chr 1:80,612,894...80,616,820
Ensembl chr 1:80,612,895...80,617,057
JBrowse link
G Atm ATM serine/threonine kinase ISO MGI:88057 (MGI:3588634|PMID:15863839) RGD PMID:15863839 MGI:3588634 NCBI chr 8:58,015,938...58,119,973
Ensembl chr 8:58,015,940...58,120,045
JBrowse link
G Ctsd cathepsin D ISO (PMID:16997486) RGD PMID:16997486 NCBI chr 1:215,541,570...215,553,446
Ensembl chr 1:215,541,542...215,553,451
JBrowse link
G Ldlr low density lipoprotein receptor IEA
ISO
GO_REF:0000107
MGI:1857212 (MGI:1313233|PMID:9788969), (MGI:3576461|PMID:15805190), (MGI:3583861|PMID:15741654)
Ensembl
RGD
PMID:9788969, PMID:15741654, PMID:15805190 GO_REF:0000107, MGI:1313233, MGI:3576461, MGI:3583861 NCBI chr 8:22,750,425...22,773,305
Ensembl chr 8:22,750,336...22,774,903
JBrowse link
N-terminal peptidyl-glycine N-myristoylation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nmt1 N-myristoyltransferase 1 ISO
IBA
ISS
(PMID:25255805)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:25255805, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr10:91,126,689...91,160,721
Ensembl chr10:91,126,689...91,160,720
JBrowse link
G Nmt2 N-myristoyltransferase 2 TAS
IBA
ISO
PMID:21873635
(PMID:25255805)
RGD PMID:25255805, PMID:11731439, PMID:21873635 RGD:1323839, RGD:13792537 NCBI chr17:78,919,235...78,966,013
Ensembl chr17:78,921,793...78,962,476
JBrowse link
N-terminal peptidyl-L-cysteine N-palmitoylation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Map6d1 MAP6 domain containing 1 ISO (MGI:3695226|PMID:16837464) RGD PMID:16837464 MGI:3695226 NCBI chr11:84,321,078...84,327,307
Ensembl chr11:84,321,078...84,327,307
JBrowse link
N-terminal protein myristoylation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nmt1 N-myristoyltransferase 1 ISO MGI:3586313 (MGI:3584234|PMID:15753093) RGD PMID:15753093 MGI:3584234 NCBI chr10:91,126,689...91,160,721
Ensembl chr10:91,126,689...91,160,720
JBrowse link
G Nmt2 N-myristoyltransferase 2 TAS RGD PMID:11731439 RGD:1323839 NCBI chr17:78,919,235...78,966,013
Ensembl chr17:78,921,793...78,962,476
JBrowse link
G Ppm1a protein phosphatase, Mg2+/Mn2+ dependent, 1A IEA
ISO
ISS
GO_REF:0000107
(MGI:5470043|PMID:23088624)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:23088624 GO_REF:0000024, GO_REF:0000107, MGI:5470043 NCBI chr 6:94,433,658...94,484,979
Ensembl chr 6:94,429,068...94,484,351
JBrowse link
G Ppm1b protein phosphatase, Mg2+/Mn2+ dependent, 1B ISS
ISO
GO_REF:0000024
(MGI:5470043|PMID:23088624)
UniProt
RGD
PMID:23088624 GO_REF:0000024, MGI:5470043 NCBI chr 6:8,219,385...8,280,127
Ensembl chr 6:8,218,696...8,280,124
JBrowse link
negative regulation of lipoprotein lipid oxidation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apod apolipoprotein D IEA
ISO
ISS
GO_REF:0000107
(MGI:3829114|PMID:18419796)
GO_REF:0000024
(PMID:18419796)
Ensembl
RGD
UniProt
PMID:18419796 GO_REF:0000024, GO_REF:0000107, MGI:3829114 NCBI chr11:72,705,204...72,726,263
Ensembl chr11:72,705,129...72,726,301
JBrowse link
negative regulation of lipoprotein metabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Itgav integrin subunit alpha V ISO (PMID:15215180) RGD PMID:15215180 NCBI chr 3:71,113,269...71,205,958
Ensembl chr 3:71,114,100...71,202,411
JBrowse link
G Itgb3 integrin subunit beta 3 ISO (PMID:15215180) RGD PMID:15215180 NCBI chr10:92,667,869...92,783,413
Ensembl chr10:92,667,869...92,783,410
JBrowse link
negative regulation of N-terminal protein palmitoylation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hhatl hedgehog acyltransferase-like IBA
ISO
PMID:21873635
(MGI:3772109|PMID:18081866)
RGD PMID:18081866, PMID:21873635 MGI:3772109, RGD:13792537 NCBI chr 8:130,422,071...130,429,205
Ensembl chr 8:130,422,066...130,429,132
JBrowse link
negative regulation of protein lipidation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dbi diazepam binding inhibitor, acyl-CoA binding protein ISO (PMID:21079819) RGD PMID:21079819 NCBI chr13:36,147,667...36,156,076
Ensembl chr13:36,117,119...36,174,908
JBrowse link
peptidyl-L-cysteine S-palmitoylation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clip3 CAP-GLY domain containing linker protein 3 ISO
ISS
(PMID:15262990)
GO_REF:0000024
RGD
UniProt
PMID:15262990 GO_REF:0000024 NCBI chr 1:88,750,453...88,766,453
Ensembl chr 1:90,962,707...90,978,907
JBrowse link
G Golga7 golgin A7 ISO
IBA
ISS
(PMID:16000296)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:16000296, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr16:73,564,172...73,579,389
Ensembl chr16:73,564,243...73,579,382
JBrowse link
G Golga7b golgin A7 family, member B IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:261,494,511...261,514,413
Ensembl chr 1:261,497,059...261,516,892
JBrowse link
G LOC108348122 CAP-Gly domain-containing linker protein 3 ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 1:90,962,921...90,978,946
Ensembl chr 1:90,962,707...90,978,907
JBrowse link
G Zdhhc1 zinc finger, DHHC-type containing 1 IBA
ISO
PMID:21873635
(MGI:6393080|PMID:23687301)
RGD PMID:23687301, PMID:21873635 MGI:6393080, RGD:13792537 NCBI chr19:37,428,959...37,454,150
Ensembl chr19:37,428,959...37,454,040
JBrowse link
G Zdhhc11 zinc finger, DHHC-type containing 11 IBA
ISO
PMID:21873635
(MGI:6393080|PMID:23687301)
RGD PMID:23687301, PMID:21873635 MGI:6393080, RGD:13792537 NCBI chr 1:31,906,049...31,936,603
Ensembl chr 1:31,906,064...31,936,537
JBrowse link
G Zdhhc12 zinc finger DHHC-type palmitoyltransferase 12 IBA
ISO
ISS
PMID:21873635
(MGI:5586946|PMID:25025157)
GO_REF:0000024
RGD
UniProt
PMID:25025157, PMID:21873635 GO_REF:0000024, MGI:5586946, RGD:13792537 NCBI chr 3:8,656,397...8,659,102
Ensembl chr 3:8,656,412...8,659,102
JBrowse link
G Zdhhc14 zinc finger DHHC-type palmitoyltransferase 14 IBA
ISO
PMID:21873635
(PMID:27481942)
RGD PMID:27481942, PMID:21873635 RGD:13792537 NCBI chr 1:46,378,807...46,658,527
Ensembl chr 1:46,378,807...46,649,292
JBrowse link
G Zdhhc15 zinc finger DHHC-type palmitoyltransferase 15 IBA
ISO
ISS
PMID:21873635
(MGI:3521633|PMID:15603741), (MGI:6414675|PMID:28167757)
GO_REF:0000024
(PMID:18817523)
RGD
UniProt
PMID:15603741, PMID:18817523, PMID:28167757, PMID:21873635 GO_REF:0000024, MGI:3521633, MGI:6414675, RGD:13792537 NCBI chr  X:75,433,957...75,566,531
Ensembl chr  X:75,439,778...75,566,481
JBrowse link
G Zdhhc17 zinc finger DHHC-type palmitoyltransferase 17 ISO (MGI:6414675|PMID:28167757) RGD PMID:28167757 MGI:6414675 NCBI chr 7:53,651,529...53,715,007
Ensembl chr 7:53,653,116...53,714,879
JBrowse link
G Zdhhc18 zinc finger DHHC-type palmitoyltransferase 18 IBA
IEA
ISS
ISO
PMID:21873635
GO_REF:0000107
GO_REF:0000024
(PMID:27481942)
Ensembl
UniProt
RGD
PMID:27481942, PMID:21873635 GO_REF:0000024, GO_REF:0000107, RGD:13792537 NCBI chr 5:151,829,795...151,856,256
Ensembl chr 5:151,831,527...151,856,256
JBrowse link
G Zdhhc19 zinc finger DHHC-type palmitoyltransferase 19 IBA
ISO
PMID:21873635
(PMID:20074548)
RGD PMID:20074548, PMID:21873635 RGD:13792537 NCBI chr11:71,490,346...71,522,959
Ensembl chr11:71,511,715...71,523,267
JBrowse link
G Zdhhc2 zinc finger DHHC-type palmitoyltransferase 2 IBA
ISO
IMP
PMID:21873635
(MGI:6392962|PMID:25589740), (MGI:6393202|PMID:21343290), (MGI:6414675|PMID:28167757)
PMID:19596852
(PMID:18296695), (PMID:18508921), (PMID:22034844), (PMID:23793055)
RGD PMID:18296695, PMID:18508921, PMID:21343290, PMID:22034844, PMID:23793055, PMID:25589740, PMID:28167757, PMID:21873635, PMID:19596852 MGI:6392962, MGI:6393202, MGI:6414675, RGD:13792537, RGD:21201259 NCBI chr16:54,932,546...55,002,322
Ensembl chr16:54,934,056...55,002,322
JBrowse link
G Zdhhc20 zinc finger DHHC-type palmitoyltransferase 20 ISO
IBA
(PMID:29326245)
PMID:21873635
RGD PMID:29326245, PMID:21873635 RGD:13792537 NCBI chr15:38,108,886...38,165,765
Ensembl chr15:38,109,301...38,165,746
JBrowse link
G Zdhhc21 zinc finger DHHC-type palmitoyltransferase 21 ISO
IBA
(PMID:22031296)
(MGI:5904576|PMID:27653213), (MGI:5921050|PMID:26715683)
PMID:21873635
RGD PMID:22031296, PMID:26715683, PMID:27653213, PMID:21873635 MGI:5904576, MGI:5921050, RGD:13792537 NCBI chr 5:100,924,621...100,983,412
Ensembl chr 5:100,924,622...100,977,902
JBrowse link
G Zdhhc22 zinc finger DHHC-type palmitoyltransferase 22 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:111,008,440...111,015,695
Ensembl chr 6:111,007,674...111,015,598
JBrowse link
G Zdhhc23 zinc finger DHHC-type palmitoyltransferase 23 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr11:61,661,119...61,677,547
Ensembl chr11:61,661,310...61,676,684
JBrowse link
G Zdhhc24 zinc finger, DHHC-type containing 24 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:220,137,280...220,143,387
Ensembl chr 1:220,137,257...220,144,319
JBrowse link
G Zdhhc25 zinc finger, DHHC-type containing 25 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:129,595,192...129,596,424
Ensembl chr 7:129,595,192...129,596,424
JBrowse link
G Zdhhc3 zinc finger DHHC-type palmitoyltransferase 3 IBA
ISO
PMID:21873635
(MGI:6393070|PMID:23793055), (MGI:6393080|PMID:23687301), (MGI:6414675|PMID:28167757)
RGD PMID:23687301, PMID:23793055, PMID:28167757, PMID:21873635 MGI:6393070, MGI:6393080, MGI:6414675, RGD:13792537 NCBI chr 8:132,156,216...132,204,484
Ensembl chr 8:132,160,172...132,189,388
JBrowse link
G Zdhhc4 zinc finger DHHC-type palmitoyltransferase 4 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr12:13,284,508...13,298,519
Ensembl chr12:13,284,532...13,298,575
JBrowse link
G Zdhhc6 zinc finger DHHC-type palmitoyltransferase 6 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:276,291,411...276,309,633
Ensembl chr 1:276,291,417...276,309,099
JBrowse link
G Zdhhc7 zinc finger DHHC-type palmitoyltransferase 7 ISS
ISO
IBA
GO_REF:0000024
(MGI:5824884|PMID:28057756), (MGI:6393080|PMID:23687301), (MGI:6393185|PMID:27380321), (MGI:6414675|PMID:28167757)
(PMID:22031296), (PMID:25301068), (PMID:27380321), (PMID:28196865)
PMID:21873635
UniProt
RGD
PMID:22031296, PMID:23687301, PMID:25301068, PMID:27380321, PMID:28057756, PMID:28167757, PMID:28196865, PMID:21873635 GO_REF:0000024, MGI:5824884, MGI:6393080, MGI:6393185, MGI:6414675, RGD:13792537 NCBI chr19:52,733,161...52,750,307
Ensembl chr19:52,733,161...52,750,307
JBrowse link
G Zdhhc8 zinc finger DHHC-type palmitoyltransferase 8 ISO (PMID:19556522) RGD PMID:19556522 NCBI chr11:86,903,122...86,917,261
Ensembl chr11:86,903,122...86,915,715
JBrowse link
G Zdhhc9 zinc finger DHHC-type palmitoyltransferase 9 IBA
ISO
PMID:21873635
(PMID:16000296), (PMID:27481942)
RGD PMID:16000296, PMID:27481942, PMID:21873635 RGD:13792537 NCBI chr  X:135,005,171...135,041,207
Ensembl chr  X:135,005,123...135,041,027
JBrowse link
peptidyl-serine octanoylation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mboat4 membrane bound O-acyltransferase domain containing 4 IDA
ISO
IBA
PMID:18443287
(MGI:3789438|PMID:18443287), (MGI:3808959|PMID:18267071)
PMID:21873635
(PMID:18443287)
RGD PMID:18267071, PMID:18443287, PMID:18443287, PMID:21873635 MGI:3789438, MGI:3808959, RGD:8554475, RGD:13792537 NCBI chr16:61,782,699...61,795,414
Ensembl chr16:61,782,797...61,791,091
JBrowse link
positive regulation of lipoprotein metabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pemt phosphatidylethanolamine N-methyltransferase IMP RGD PMID:12091487 RGD:1626402 NCBI chr10:46,339,821...46,404,640
Ensembl chr10:46,339,821...46,404,642
JBrowse link
positive regulation of protein lipidation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gba glucosylceramidase beta ISO UniProtKB:P37840 (PMID:26392287) RGD PMID:26392287 NCBI chr 2:188,511,781...188,522,602
Ensembl chr 2:188,516,582...188,522,601
JBrowse link
G Rab3gap1 RAB3 GTPase activating protein catalytic subunit 1 ISO
ISS
IEA
(PMID:25495476)
GO_REF:0000024
GO_REF:0000107
RGD
GO_Central
Ensembl
PMID:25495476 GO_REF:0000024, GO_REF:0000107 NCBI chr13:44,578,208...44,649,876
Ensembl chr13:44,615,553...44,648,620
JBrowse link
G Rab3gap2 RAB3 GTPase activating non-catalytic protein subunit 2 ISO
ISS
IEA
(PMID:25495476)
GO_REF:0000024
GO_REF:0000107
RGD
GO_Central
Ensembl
PMID:25495476 GO_REF:0000024, GO_REF:0000107 NCBI chr13:103,157,806...103,229,010
Ensembl chr13:103,157,806...103,228,423
JBrowse link
G Svip small VCP interacting protein ISO (PMID:21909394) RGD PMID:21909394 NCBI chr 1:107,368,117...107,373,807
Ensembl chr 1:107,368,117...107,373,807
JBrowse link
protein depalmitoleylation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Notum NOTUM, palmitoleoyl-protein carboxylesterase ISO
IBA
(PMID:25731175)
PMID:21873635
(MGI:5640887|PMID:25771893)
RGD PMID:25731175, PMID:25771893, PMID:21873635 MGI:5640887, RGD:13792537 NCBI chr10:109,832,977...109,840,661
Ensembl chr10:109,832,981...109,840,047
JBrowse link
protein depalmitoylation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07006474.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 1:236,529,931...236,530,485 JBrowse link
G Abhd10 abhydrolase domain containing 10, depalmitoylase ISO
ISS
(PMID:31740833)
GO_REF:0000024
RGD
UniProt
PMID:31740833 GO_REF:0000024 NCBI chr11:60,053,719...60,068,142
Ensembl chr11:60,054,408...60,066,739
JBrowse link
G Abhd12 abhydrolase domain containing 12, lysophospholipase ISO (MGI:6094388|PMID:27307232) RGD PMID:27307232 MGI:6094388 NCBI chr 3:146,630,298...146,690,375
Ensembl chr 3:146,630,299...146,690,375
JBrowse link
G Abhd13 abhydrolase domain containing 13 ISO (MGI:6094388|PMID:27307232) RGD PMID:27307232 MGI:6094388 NCBI chr16:85,315,275...85,330,108
Ensembl chr16:85,315,275...85,330,092
JBrowse link
G Abhd17a abhydrolase domain containing 17A, depalmitoylase IDA
ISO
IBA
PMID:27307232
UniProtKB:Q5VST6|UniProtKB:Q6PCB6 (PMID:26701913)
PMID:21873635
RGD PMID:26701913, PMID:27307232, PMID:21873635 RGD:13441201, RGD:13792537 NCBI chr 7:11,992,543...12,000,978
Ensembl chr 7:11,992,543...11,998,973
JBrowse link
G Abhd17b abhydrolase domain containing 17B, depalmitoylase IBA
ISO
PMID:21873635
(MGI:6094388|PMID:27307232), (MGI:6103577|PMID:28521134)
UniProtKB:Q6PCB6|UniProtKB:Q96GS6 (PMID:26701913)
RGD PMID:26701913, PMID:27307232, PMID:28521134, PMID:21873635 MGI:6094388, MGI:6103577, RGD:13792537 NCBI chr 1:239,266,140...239,301,133
Ensembl chr 1:239,266,921...239,301,176
JBrowse link
G Abhd17c abhydrolase domain containing 17C, depalmitoylase IBA
ISO
PMID:21873635
(MGI:6094388|PMID:27307232)
UniProtKB:Q5VST6|UniProtKB:Q96GS6 (PMID:26701913)
RGD PMID:26701913, PMID:27307232, PMID:21873635 MGI:6094388, RGD:13792537 NCBI chr 1:146,248,505...146,289,465
Ensembl chr 1:146,248,503...146,289,465
JBrowse link
G LOC103691298 acyl-protein thioesterase 1 pseudogene IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:236,529,758...236,530,758 JBrowse link
G LOC103693563 mycophenolic acid acyl-glucuronide esterase, mitochondrial ISS
ISO
GO_REF:0000024
(MGI:6467702|PMID:31740833)
UniProt
RGD
PMID:31740833 GO_REF:0000024, MGI:6467702 NCBI chr11:57,485,649...57,500,476
Ensembl chr11:57,486,365...57,498,894
JBrowse link
G Lypla1 lysophospholipase 1 IBA
ISO
ISS
PMID:21873635
(MGI:5427292|PMID:22399288), (MGI:6094388|PMID:27307232)
GO_REF:0000024
(PMID:19439193), (PMID:27481942)
RGD
UniProt
PMID:19439193, PMID:22399288, PMID:27307232, PMID:27481942, PMID:21873635 GO_REF:0000024, MGI:5427292, MGI:6094388, RGD:13792537 NCBI chr 5:14,559,333...14,588,447
Ensembl chr 5:14,559,334...14,588,422
JBrowse link
G Lypla2 lysophospholipase 2 ISO
IBA
ISS
(PMID:28826475)
(MGI:6094388|PMID:27307232)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:27307232, PMID:28826475, PMID:21873635 GO_REF:0000024, MGI:6094388, RGD:13792537 NCBI chr 5:154,315,033...154,319,629
Ensembl chr 5:154,315,033...154,319,629
JBrowse link
G Lyplal1 lysophospholipase-like 1 IBA
ISO
PMID:21873635
(MGI:5427292|PMID:22399288)
RGD PMID:22399288, PMID:21873635 MGI:5427292, RGD:13792537 NCBI chr13:104,049,263...104,080,680
Ensembl chr13:104,049,386...104,080,631
JBrowse link
G Ppt1 palmitoyl-protein thioesterase 1 ISS
ISO
IBA
GO_REF:0000024
MGI:2176390 (MGI:2154013|PMID:11717424), (MGI:3608104|PMID:16242638)
PMID:21873635
(PMID:10658183), (PMID:10737604)
PMID:8895569
UniProt
RGD
PMID:10658183, PMID:10737604, PMID:11717424, PMID:16242638, PMID:21873635, PMID:8895569 GO_REF:0000024, MGI:2154013, MGI:3608104, RGD:13792537, RGD:8553248 NCBI chr 5:140,538,260...140,558,163
Ensembl chr 5:140,538,260...140,558,162
JBrowse link
protein lipidation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca1 ATP binding cassette subfamily A member 1 ISO MGI:3577725 (MGI:3611144|PMID:16204232) RGD PMID:16204232 MGI:3611144 NCBI chr 5:69,857,717...69,983,042
Ensembl chr 5:69,857,771...69,983,015
JBrowse link
G Alox12b arachidonate 12-lipoxygenase, 12R type IEA
ISO
ISS
GO_REF:0000107
(MGI:5141179|PMID:21558561)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:21558561 GO_REF:0000024, GO_REF:0000107, MGI:5141179 NCBI chr10:55,744,646...55,756,524
Ensembl chr10:55,744,588...55,756,566
JBrowse link
G Atg10 autophagy related 10 IBA
ISO
PMID:21873635
(MGI:2677578|PMID:12890687)
RGD PMID:12890687, PMID:21873635 MGI:2677578, RGD:13792537 NCBI chr 2:19,853,546...20,152,918
Ensembl chr 2:19,853,546...20,152,884
JBrowse link
G Atg7 autophagy related 7 ISO (PMID:12890687) RGD PMID:12890687 NCBI chr 4:146,570,113...146,777,093
Ensembl chr 4:146,598,413...146,777,124
JBrowse link
G Mttp microsomal triglyceride transfer protein ISO (MGI:2386141|PMID:12072432) RGD PMID:12072432 MGI:2386141 NCBI chr 2:243,366,181...243,407,608
Ensembl chr 2:243,366,181...243,407,608
JBrowse link
G Pik3c3 phosphatidylinositol 3-kinase, catalytic subunit type 3 ISO (PMID:25327288) RGD PMID:25327288 NCBI chr18:22,964,121...23,047,896
Ensembl chr18:22,964,210...23,047,895
JBrowse link
G Porcn porcupine O-acyltransferase ISO (MGI:5607507|PMID:24798332), (MGI:5621264|PMID:17141155) RGD PMID:17141155, PMID:24798332 MGI:5607507, MGI:5621264 NCBI chr  X:15,035,569...15,048,440
Ensembl chr  X:15,035,569...15,048,440
JBrowse link
G Ugcg UDP-glucose ceramide glucosyltransferase ISS
ISO
GO_REF:0000024
(MGI:5510915|PMID:23748427)
UniProt
RGD
PMID:23748427 GO_REF:0000024, MGI:5510915 NCBI chr 5:76,376,722...76,419,564
Ensembl chr 5:76,386,836...76,419,560
JBrowse link
G Wdr45 WD repeat domain 45 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:15,621,249...15,627,159
Ensembl chr  X:15,621,209...15,627,235
JBrowse link
G Wdr45b WD repeat domain 45B IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:110,523,843...110,555,769
Ensembl chr10:110,525,749...110,555,761
JBrowse link
G Wipi1 WD repeat domain, phosphoinositide interacting 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:97,859,730...97,896,949
Ensembl chr10:97,859,727...97,896,525
JBrowse link
G Wipi2 WD repeat domain, phosphoinositide interacting 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr12:13,969,704...13,998,134
Ensembl chr12:13,969,586...13,998,172
JBrowse link
protein lipidation involved in autophagosome assembly term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atg16l1 autophagy related 16-like 1 ISO (MGI:5605433|PMID:24954904) RGD PMID:24954904 MGI:5605433 NCBI chr 9:94,879,876...94,915,231
Ensembl chr 9:94,879,745...94,915,228
JBrowse link
G Atg5 autophagy related 5 IEA
ISO
GO_REF:0000107
(MGI:5543871|PMID:23918802)
Ensembl
RGD
PMID:23918802 GO_REF:0000107, MGI:5543871 NCBI chr20:49,301,783...49,393,147
Ensembl chr20:49,318,308...49,393,140
JBrowse link
G Irgm immunity-related GTPase M ISO (PMID:28389568) RGD PMID:28389568 NCBI chr10:34,213,885...34,221,968
Ensembl chr10:34,213,936...34,221,928
JBrowse link
G Wipi2 WD repeat domain, phosphoinositide interacting 2 ISO (MGI:5605433|PMID:24954904) RGD PMID:24954904 MGI:5605433 NCBI chr12:13,969,704...13,998,134
Ensembl chr12:13,969,586...13,998,172
JBrowse link
protein palmitoleylation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Porcn porcupine O-acyltransferase ISO (MGI:5607507|PMID:24798332), (MGI:5621264|PMID:17141155) RGD PMID:17141155, PMID:24798332 MGI:5607507, MGI:5621264 NCBI chr  X:15,035,569...15,048,440
Ensembl chr  X:15,035,569...15,048,440
JBrowse link
protein palmitoylation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Glul glutamate-ammonia ligase ISS
ISO
GO_REF:0000024
(PMID:30158707)
UniProt
RGD
PMID:30158707 GO_REF:0000024 NCBI chr13:71,331,052...71,340,207
Ensembl chr13:71,331,052...71,340,229
JBrowse link
G Hhat hedgehog acyltransferase IBA
ISO
PMID:21873635
MGI:3051900|MGI:3051901 (MGI:3039193|PMID:15075292)
RGD PMID:15075292, PMID:21873635 MGI:3039193, RGD:13792537 NCBI chr13:111,235,325...111,489,075
Ensembl chr13:111,236,466...111,474,411
JBrowse link
G Porcn porcupine O-acyltransferase IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:15,035,569...15,048,440
Ensembl chr  X:15,035,569...15,048,440
JBrowse link
G Selenok selenoprotein K IEA
ISO
ISS
GO_REF:0000107
MGI:4941878 (MGI:5509276|PMID:23444136), (MGI:5609483|PMID:25368151)
GO_REF:0000024
(PMID:25368151)
Ensembl
RGD
UniProt
PMID:23444136, PMID:25368151 GO_REF:0000024, GO_REF:0000107, MGI:5509276, MGI:5609483 NCBI chr16:6,035,926...6,044,240
Ensembl chr16:6,035,926...6,044,239
JBrowse link
G Zdhhc1 zinc finger, DHHC-type containing 1 ISO (PMID:23034182)
(MGI:3521633|PMID:15603741)
RGD PMID:15603741, PMID:23034182 MGI:3521633 NCBI chr19:37,428,959...37,454,150
Ensembl chr19:37,428,959...37,454,040
JBrowse link
G Zdhhc12 zinc finger DHHC-type palmitoyltransferase 12 ISO (PMID:23034182) RGD PMID:23034182 NCBI chr 3:8,656,397...8,659,102
Ensembl chr 3:8,656,412...8,659,102
JBrowse link
G Zdhhc13 zinc finger DHHC-type palmitoyltransferase 13 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:104,106,211...104,145,045
Ensembl chr 1:104,106,245...104,145,044
JBrowse link
G Zdhhc14 zinc finger DHHC-type palmitoyltransferase 14 ISO (PMID:23034182) RGD PMID:23034182 NCBI chr 1:46,378,807...46,658,527
Ensembl chr 1:46,378,807...46,649,292
JBrowse link
G Zdhhc15 zinc finger DHHC-type palmitoyltransferase 15 ISO (PMID:23034182)
(MGI:3521633|PMID:15603741), (MGI:6392974|PMID:18596047)
RGD PMID:15603741, PMID:18596047, PMID:23034182 MGI:3521633, MGI:6392974 NCBI chr  X:75,433,957...75,566,531
Ensembl chr  X:75,439,778...75,566,481
JBrowse link
G Zdhhc16 zinc finger DHHC-type palmitoyltransferase 16 ISO
IBA
(PMID:23034182), (PMID:28826475)
(MGI:5706675|PMID:26644582)
PMID:21873635
RGD PMID:23034182, PMID:26644582, PMID:28826475, PMID:21873635 MGI:5706675, RGD:13792537 NCBI chr 1:261,179,971...261,191,374
Ensembl chr 1:261,180,007...261,191,367
JBrowse link
G Zdhhc17 zinc finger DHHC-type palmitoyltransferase 17 ISS
ISO
IBA
GO_REF:0000024
(MGI:3521633|PMID:15603741), (MGI:5640908|PMID:25253725), (MGI:6392974|PMID:18596047)
(PMID:23034182), (PMID:24705354)
PMID:21873635
UniProt
RGD
PMID:15603741, PMID:18596047, PMID:23034182, PMID:24705354, PMID:25253725, PMID:21873635 GO_REF:0000024, MGI:3521633, MGI:5640908, MGI:6392974, RGD:13792537 NCBI chr 7:53,651,529...53,715,007
Ensembl chr 7:53,653,116...53,714,879
JBrowse link
G Zdhhc18 zinc finger DHHC-type palmitoyltransferase 18 ISO (PMID:23034182) RGD PMID:23034182 NCBI chr 5:151,829,795...151,856,256
Ensembl chr 5:151,831,527...151,856,256
JBrowse link
G Zdhhc2 zinc finger DHHC-type palmitoyltransferase 2 ISO (PMID:23034182)
(MGI:3521633|PMID:15603741)
RGD PMID:15603741, PMID:23034182 MGI:3521633 NCBI chr16:54,932,546...55,002,322
Ensembl chr16:54,934,056...55,002,322
JBrowse link
G Zdhhc20 zinc finger DHHC-type palmitoyltransferase 20 ISO (PMID:23034182) RGD PMID:23034182 NCBI chr15:38,108,886...38,165,765
Ensembl chr15:38,109,301...38,165,746
JBrowse link
G Zdhhc21 zinc finger DHHC-type palmitoyltransferase 21 ISO (PMID:23034182)
MGI:1856841 (MGI:4461118|PMID:19997487)
RGD PMID:19997487, PMID:23034182 MGI:4461118 NCBI chr 5:100,924,621...100,983,412
Ensembl chr 5:100,924,622...100,977,902
JBrowse link
G Zdhhc22 zinc finger DHHC-type palmitoyltransferase 22 ISO (PMID:22399288)
(MGI:5427292|PMID:22399288)
RGD PMID:22399288 MGI:5427292 NCBI chr 6:111,008,440...111,015,695
Ensembl chr 6:111,007,674...111,015,598
JBrowse link
G Zdhhc23 zinc finger DHHC-type palmitoyltransferase 23 ISO (PMID:22399288)
(MGI:5427292|PMID:22399288)
RGD PMID:22399288 MGI:5427292 NCBI chr11:61,661,119...61,677,547
Ensembl chr11:61,661,310...61,676,684
JBrowse link
G Zdhhc3 zinc finger DHHC-type palmitoyltransferase 3 ISO (PMID:19001095), (PMID:21926431), (PMID:23034182)
(MGI:3521633|PMID:15603741), (MGI:3831644|PMID:19001095), (MGI:5640908|PMID:25253725), (MGI:5812604|PMID:27613864), (MGI:6392974|PMID:18596047), (MGI:6393119|PMID:17151279)
RGD PMID:15603741, PMID:17151279, PMID:18596047, PMID:19001095, PMID:21926431, PMID:23034182, PMID:25253725, PMID:27613864 MGI:3521633, MGI:3831644, MGI:5640908, MGI:5812604, MGI:6392974, MGI:6393119 NCBI chr 8:132,156,216...132,204,484
Ensembl chr 8:132,160,172...132,189,388
JBrowse link
G Zdhhc5 zinc finger DHHC-type palmitoyltransferase 5 ISO
IBA
(PMID:22325201), (PMID:23034182)
(MGI:5288107|PMID:21820437), (MGI:5315188|PMID:22325201)
PMID:21873635
RGD PMID:21820437, PMID:22325201, PMID:23034182, PMID:21873635 MGI:5288107, MGI:5315188, RGD:13792537 NCBI chr 3:72,090,526...72,118,406
Ensembl chr 3:72,091,315...72,113,680
JBrowse link
G Zdhhc6 zinc finger DHHC-type palmitoyltransferase 6 ISO (PMID:22728137), (PMID:23034182), (PMID:25368151), (PMID:28826475)
(MGI:5609483|PMID:25368151)
RGD PMID:22728137, PMID:23034182, PMID:25368151, PMID:28826475 MGI:5609483 NCBI chr 1:276,291,411...276,309,633
Ensembl chr 1:276,291,417...276,309,099
JBrowse link
G Zdhhc7 zinc finger DHHC-type palmitoyltransferase 7 ISS
ISO
GO_REF:0000024
(MGI:3521633|PMID:15603741), (MGI:3831644|PMID:19001095), (MGI:5640908|PMID:25253725), (MGI:6392974|PMID:18596047)
(PMID:19001095), (PMID:23034182)
UniProt
RGD
PMID:15603741, PMID:18596047, PMID:19001095, PMID:23034182, PMID:25253725 GO_REF:0000024, MGI:3521633, MGI:3831644, MGI:5640908, MGI:6392974 NCBI chr19:52,733,161...52,750,307
Ensembl chr19:52,733,161...52,750,307
JBrowse link
G Zdhhc8 zinc finger DHHC-type palmitoyltransferase 8 ISO
IBA
(PMID:23034182)
PMID:21873635
RGD PMID:23034182, PMID:21873635 RGD:13792537 NCBI chr11:86,903,122...86,917,261
Ensembl chr11:86,903,122...86,915,715
JBrowse link
G Zdhhc9 zinc finger DHHC-type palmitoyltransferase 9 ISO (PMID:23034182) RGD PMID:23034182 NCBI chr  X:135,005,171...135,041,207
Ensembl chr  X:135,005,123...135,041,027
JBrowse link
regulation of lipoprotein lipid oxidation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lep leptin IDA RGD PMID:21068181 RGD:5128556 NCBI chr 4:56,337,695...56,351,818
Ensembl chr 4:56,337,695...56,351,818
JBrowse link
regulation of lipoprotein metabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Angptl8 angiopoietin-like 8 ISO (PMID:23150577)
(MGI:5613455|PMID:24043787)
RGD PMID:23150577, PMID:24043787 MGI:5613455 NCBI chr 8:22,855,495...22,858,565
Ensembl chr 8:22,856,539...22,858,565
JBrowse link
G Dgat2 diacylglycerol O-acyltransferase 2 IMP RGD PMID:17526931 RGD:10400884 NCBI chr 1:164,113,459...164,143,818
Ensembl chr 1:164,113,459...164,143,818
JBrowse link
G Lipg lipase G, endothelial type ISO MGI:2450672 (MGI:3770473|PMID:17681148) RGD PMID:17681148 MGI:3770473 NCBI chr18:70,903,528...70,924,434
Ensembl chr18:70,901,710...70,924,708
JBrowse link
regulation of protein lipidation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rabl3 RAB, member of RAS oncogene family-like 3 ISO (PMID:31406347) RGD PMID:31406347 NCBI chr11:66,049,635...66,078,669
Ensembl chr11:66,049,635...66,078,669
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20020
    metabolic process 12263
      primary metabolic process 10900
        protein metabolic process 6221
          lipoprotein metabolic process 147
            lipoprotein biosynthetic process + 100
            lipoprotein catabolic process + 19
            lipoprotein modification + 2
            negative regulation of lipoprotein metabolic process + 5
            positive regulation of lipoprotein metabolic process + 5
            regulation of lipoprotein metabolic process + 15
Path 2
Term Annotations click to browse term
  biological_process 20020
    metabolic process 12263
      organic substance metabolic process 11643
        macromolecule metabolic process 10077
          protein metabolic process 6221
            lipoprotein metabolic process 147
              lipoprotein biosynthetic process + 100
              lipoprotein catabolic process + 19
              lipoprotein modification + 2
              negative regulation of lipoprotein metabolic process + 5
              positive regulation of lipoprotein metabolic process + 5
              regulation of lipoprotein metabolic process + 15
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.