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ONTOLOGY REPORT - ANNOTATIONS

Term:lipoprotein metabolic process
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Accession:GO:0042157 term browser browse the term
Definition:The chemical reactions and pathways involving any conjugated, water-soluble protein in which the covalently attached nonprotein group consists of a lipid or lipids.
Synonyms:exact_synonym: lipoprotein metabolism


show annotations for term's descendants           Sort by:
lipoprotein metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07058479.1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 Ensembl chr 7:109,157,933...109,175,591 JBrowse link
G Abca1 ATP binding cassette subfamily A member 1 acts_upstream_of_or_within ISO MGI:1935192 (PMID:15269218) RGD PMID:15269218 NCBI chr 5:67,678,267...67,801,162
Ensembl chr 5:67,681,297...67,801,170 		JBrowse link
G Apoa1 apolipoprotein A1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 8:46,527,251...46,529,035
Ensembl chr 8:46,527,144...46,529,035 		JBrowse link
G Apoa2 apolipoprotein A2 acts_upstream_of_or_within ISO (PMID:7837794), (PMID:9150245) RGD PMID:7837794 PMID:9150245 NCBI chr13:83,644,460...83,646,358
Ensembl chr13:83,644,470...83,646,355 		JBrowse link
G Apoa4 apolipoprotein A4 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 8:46,539,083...46,541,464
Ensembl chr 8:46,539,082...46,541,469 		JBrowse link
G Apoa5 apolipoprotein A5 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 8:46,561,180...46,563,818
Ensembl chr 8:46,561,229...46,563,816 		JBrowse link
G Apob apolipoprotein B acts_upstream_of_or_within ISO MGI:1857303|MGI:1857625|MGI:2157108|MGI:3665449|MGI:88057|MGI:96765 (PMID:10705993), (PMID:10713055), (PMID:11120757), (PMID:13130124), (PMID:7878058), (PMID:9852051) RGD PMID:7878058 PMID:9852051 PMID:10705993 PMID:10713055 PMID:11120757 More... NCBI chr 6:30,844,386...30,883,983
Ensembl chr 6:30,844,368...30,892,497 		JBrowse link
G Apobec1 apolipoprotein B mRNA editing enzyme catalytic subunit 1 acts_upstream_of_or_within ISO MGI:2157378 (PMID:8692961) RGD PMID:8692961 NCBI chr 4:155,800,030...155,828,515
Ensembl chr 4:155,800,887...155,827,390 		JBrowse link
G Apoc1 apolipoprotein C1 involved_in TAS
IEA		 GO_REF:0000002 InterPro
RGD		 PMID:10073946 GO_REF:0000002, RGD:1578471 NCBI chr 1:79,347,057...79,350,340
Ensembl chr 1:79,346,136...79,350,375 		JBrowse link
G Apoc3 apolipoprotein C3 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 8:46,531,478...46,533,658
Ensembl chr 8:46,531,478...46,533,583 		JBrowse link
G Apoe apolipoprotein E involved_in
acts_upstream_of_or_within		 IDA
IEA
ISO		 GO_REF:0000002
MGI:1857129|MGI:88052 (PMID:11120757), (PMID:13130124), (PMID:9788969)		 InterPro
RGD		 PMID:9788969 PMID:11120757 PMID:13130124 PMID:2492020 GO_REF:0000002, RGD:1626397 NCBI chr 1:79,353,924...79,357,852
Ensembl chr 1:79,353,916...79,357,932 		JBrowse link
G Apol11a apolipoprotein L11a involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 7:109,248,260...109,262,266
Ensembl chr 7:109,248,942...109,253,716 		JBrowse link
G Apol2 apolipoprotein L2 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 7:109,331,367...109,338,632
Ensembl chr 7:109,331,392...109,338,558 		JBrowse link
G Apol3l1 apolipoprotein L3 like 1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 7:109,288,725...109,297,728
Ensembl chr 7:109,288,725...109,297,723 		JBrowse link
G Apol7a apolipoprotein L7A involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 Ensembl chr 7:109,131,064...109,147,649 JBrowse link
G Apol7al1 apolipoprotein L7a like 1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 7:109,118,559...109,149,798
Ensembl chr 7:109,131,064...109,147,649 		JBrowse link
G Apol7bl1 apolipoprotein L7b like 1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 7:109,304,895...109,322,867
Ensembl chr 7:109,305,709...109,322,865 		JBrowse link
G Apol9a apolipoprotein L9a involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 7:109,140,871...109,149,799
Ensembl chr 7:109,140,871...109,147,649 		JBrowse link
G Apol9a-Apol7a Apol9a-Apol7a readthrough involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 7:109,118,559...109,149,798
Ensembl chr 7:109,131,064...109,147,649 		JBrowse link
G Apold1 apolipoprotein L domain containing 1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 4:167,768,437...167,825,706
Ensembl chr 4:167,818,271...167,825,706 		JBrowse link
G Apom apolipoprotein M acts_upstream_of_or_within ISO (PMID:15793583) RGD PMID:15793583 NCBI chr20:3,690,950...3,693,550
Ensembl chr20:3,688,413...3,693,550 		JBrowse link
G Lcat lecithin cholesterol acyltransferase IDA RGD PMID:3918579 RGD:1581794 NCBI chr19:33,834,748...33,838,214
Ensembl chr19:33,834,403...33,838,231 		JBrowse link
G Ldlr low density lipoprotein receptor acts_upstream_of_or_within ISO MGI:88052 (PMID:11120757), (PMID:13130124) RGD PMID:11120757 PMID:13130124 NCBI chr 8:20,270,020...20,292,981
Ensembl chr 8:20,270,041...20,294,580 		JBrowse link
G LOC120093819 apolipoprotein L3-like involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 7:109,179,086...109,187,091
Ensembl chr 7:109,179,359...109,187,093 		JBrowse link
G Mttp microsomal triglyceride transfer protein acts_upstream_of_or_within
involved_in		 IDA
ISO
IBA		 MGI:2152201 (PMID:10713055)
GO_REF:0000033		 RGD
GO_Central		 PMID:10713055 PMID:11830580 GO_REF:0000033, RGD:1582567 NCBI chr 2:226,613,090...226,654,239
Ensembl chr 2:226,613,090...226,654,239 		JBrowse link
G Npc1l1 NPC1 like intracellular cholesterol transporter 1 involved_in ISO (PMID:17140581) RGD PMID:17140581 NCBI chr14:81,071,448...81,091,113
Ensembl chr14:81,071,451...81,091,113 		JBrowse link
G Olr1 oxidized low density lipoprotein receptor 1 involved_in IMP
IBA		 GO_REF:0000033 GO_Central
RGD		 PMID:12435393 GO_REF:0000033, RGD:633387 NCBI chr 4:162,926,436...162,949,057
Ensembl chr 4:162,926,439...162,948,523 		JBrowse link
G Pcsk9 proprotein convertase subtilisin/kexin type 9 acts_upstream_of_or_within ISO (PMID:17242417) RGD PMID:17242417 NCBI chr 5:121,211,278...121,233,688
Ensembl chr 5:121,211,278...121,233,688 		JBrowse link
G Ppara peroxisome proliferator activated receptor alpha IMP RGD PMID:15537571 RGD:1580223 NCBI chr 7:116,832,405...116,900,878
Ensembl chr 7:116,832,756...116,895,346 		JBrowse link
C-terminal protein lipidation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atg16l1 autophagy related 16-like 1 involved_in ISO (PMID:33586810) RGD PMID:33586810 NCBI chr 9:88,420,737...88,457,530
Ensembl chr 9:88,422,038...88,457,529 		JBrowse link
lipoprotein biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca1 ATP binding cassette subfamily A member 1 acts_upstream_of_or_within IMP
ISO
IEP		 MGI:1935192 (PMID:12859204), (PMID:15520446) RGD PMID:12859204 PMID:15520446 PMID:14993246 PMID:21554872 RGD:1358264, RGD:21408554 NCBI chr 5:67,678,267...67,801,162
Ensembl chr 5:67,681,297...67,801,170 		JBrowse link
G Apoa1 apolipoprotein A1 acts_upstream_of_or_within ISO MGI:1857127|MGI:88057 (PMID:14595002), (PMID:16245952) RGD PMID:14595002 PMID:16245952 NCBI chr 8:46,527,251...46,529,035
Ensembl chr 8:46,527,144...46,529,035 		JBrowse link
G Apob apolipoprotein B involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:103298 (PMID:13130124)		 Ensembl
RGD		 PMID:13130124 GO_REF:0000107 NCBI chr 6:30,844,386...30,883,983
Ensembl chr 6:30,844,368...30,892,497 		JBrowse link
G Apobec1 apolipoprotein B mRNA editing enzyme catalytic subunit 1 acts_upstream_of_or_within ISO MGI:88052 (PMID:13130124) RGD PMID:13130124 NCBI chr 4:155,800,030...155,828,515
Ensembl chr 4:155,800,887...155,827,390 		JBrowse link
G Apoe apolipoprotein E involved_in
acts_upstream_of_or_within		 IEA
ISO
ISS		 GO_REF:0000107
MGI:88049 (PMID:14595002)
GO_REF:0000024
(PMID:23620513)		 Ensembl
RGD
UniProt		 PMID:14595002 PMID:23620513 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:79,353,924...79,357,852
Ensembl chr 1:79,353,916...79,357,932 		JBrowse link
G Ins2 insulin 2 involved_in ISO (PMID:8069456) RGD PMID:8069456 NCBI chr 1:197,843,277...197,992,522
Ensembl chr 1:197,843,281...197,864,775 		JBrowse link
G Lcat lecithin cholesterol acyltransferase involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:16245952)		 Ensembl
RGD		 PMID:16245952 GO_REF:0000107 NCBI chr19:33,834,748...33,838,214
Ensembl chr19:33,834,403...33,838,231 		JBrowse link
lipoprotein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apob apolipoprotein B involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:107202 (PMID:15863839)		 Ensembl
RGD		 PMID:15863839 GO_REF:0000107 NCBI chr 6:30,844,386...30,883,983
Ensembl chr 6:30,844,368...30,892,497 		JBrowse link
G Apoc2 apolipoprotein C2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:79,329,429...79,334,397
Ensembl chr 1:79,329,428...79,334,476 		JBrowse link
G Apoe apolipoprotein E acts_upstream_of_or_within ISO MGI:1857303 (PMID:17720994) RGD PMID:17720994 NCBI chr 1:79,353,924...79,357,852
Ensembl chr 1:79,353,916...79,357,932 		JBrowse link
G Atm ATM serine/threonine kinase acts_upstream_of_or_within ISO MGI:88057 (PMID:15863839) RGD PMID:15863839 NCBI chr 8:53,828,741...53,932,773
Ensembl chr 8:53,831,093...53,932,437 		JBrowse link
G Ctsd cathepsin D involved_in ISO
IEA		 (PMID:16997486)
GO_REF:0000107		 RGD
Ensembl		 PMID:16997486 GO_REF:0000107 NCBI chr 1:197,527,467...197,539,343
Ensembl chr 1:197,527,467...197,539,488 		JBrowse link
G Ldlr low density lipoprotein receptor involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1857212 (PMID:15741654), (PMID:15805190), (PMID:9788969)		 Ensembl
RGD		 PMID:9788969 PMID:15741654 PMID:15805190 GO_REF:0000107 NCBI chr 8:20,270,020...20,292,981
Ensembl chr 8:20,270,041...20,294,580 		JBrowse link
G Lipa lipase A, lysosomal acid type involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:6364606 (PMID:33357458)		 Ensembl
RGD		 PMID:33357458 GO_REF:0000107 NCBI chr 1:232,024,351...232,057,735
Ensembl chr 1:232,024,356...232,057,633 		JBrowse link
lipoprotein lipid oxidation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Samd1 sterile alpha motif domain containing 1 involved_in ISO (PMID:34006929) RGD PMID:34006929 NCBI chr19:24,151,136...24,154,475
Ensembl chr19:24,151,128...24,154,488 		JBrowse link
N-terminal peptidyl-glycine N-myristoylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nmt1 N-myristoyltransferase 1 involved_in ISS
ISO		 GO_REF:0000024
(PMID:25255805)		 UniProt
RGD		 PMID:25255805 GO_REF:0000024 NCBI chr10:87,988,826...88,025,405
Ensembl chr10:87,988,826...88,022,648 		JBrowse link
G Nmt2 N-myristoyltransferase 2 involved_in TAS
ISO		 (PMID:25255805) RGD PMID:25255805 PMID:11731439 RGD:1323839 NCBI chr17:74,917,833...74,964,788
Ensembl chr17:74,917,833...74,961,080 		JBrowse link
N-terminal peptidyl-L-cysteine N-palmitoylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hhat hedgehog acyltransferase involved_in ISO (PMID:18534984), (PMID:31875564)
(PMID:15075292)		 RGD PMID:15075292 PMID:18534984 PMID:31875564 NCBI chr13:104,024,507...104,283,580
Ensembl chr13:104,010,916...104,282,893 		JBrowse link
G Map6d1 MAP6 domain containing 1 acts_upstream_of_or_within ISO (PMID:16837464) RGD PMID:16837464 NCBI chr11:80,734,148...80,740,377
Ensembl chr11:80,734,148...80,740,377 		JBrowse link
N-terminal protein myristoylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nmt1 N-myristoyltransferase 1 acts_upstream_of_or_within ISO MGI:3586313 (PMID:15753093) RGD PMID:15753093 NCBI chr10:87,988,826...88,025,405
Ensembl chr10:87,988,826...88,022,648 		JBrowse link
G Nmt2 N-myristoyltransferase 2 TAS RGD PMID:11731439 RGD:1323839 NCBI chr17:74,917,833...74,964,788
Ensembl chr17:74,917,833...74,961,080 		JBrowse link
G Ppm1a protein phosphatase, Mg2+/Mn2+ dependent, 1A involved_in ISS
ISO		 GO_REF:0000024
(PMID:23088624)		 UniProt
RGD		 PMID:23088624 GO_REF:0000024 NCBI chr 6:91,439,094...91,486,139
Ensembl chr 6:91,438,834...91,480,697 		JBrowse link
G Ppm1b protein phosphatase, Mg2+/Mn2+ dependent, 1B involved_in ISS
ISO		 GO_REF:0000024
(PMID:23088624)		 UniProt
RGD		 PMID:23088624 GO_REF:0000024 NCBI chr 6:9,646,695...9,707,471
Ensembl chr 6:9,655,765...9,707,974 		JBrowse link
negative regulation of lipoprotein lipid oxidation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apod apolipoprotein D involved_in ISS
ISO
IEA		 GO_REF:0000024
(PMID:18419796)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:18419796 GO_REF:0000024 GO_REF:0000107 NCBI chr11:69,431,261...69,452,306
Ensembl chr11:69,431,260...69,452,305 		JBrowse link
negative regulation of lipoprotein metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Itgav integrin subunit alpha V involved_in ISO (PMID:15215180) RGD PMID:15215180 NCBI chr 3:68,838,514...68,926,653
Ensembl chr 3:68,838,189...68,926,639 		JBrowse link
G Itgb3 integrin subunit beta 3 involved_in ISO
IEA		 (PMID:15215180)
GO_REF:0000107		 RGD
Ensembl		 PMID:15215180 GO_REF:0000107 NCBI chr10:89,509,917...89,564,679
Ensembl chr10:89,509,989...89,564,679 		JBrowse link
negative regulation of N-terminal protein palmitoylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hhatl hedgehog acyltransferase-like involved_in ISO (PMID:18081866) RGD PMID:18081866 NCBI chr 8:121,447,001...121,454,070
Ensembl chr 8:121,447,002...121,454,001 		JBrowse link
negative regulation of protein lipidation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dbi diazepam binding inhibitor involved_in ISO (PMID:21079819) RGD PMID:21079819 NCBI chr13:31,241,466...31,249,853
Ensembl chr13:31,206,988...31,268,693 		JBrowse link
peptidyl-L-cysteine S-palmitoylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clip3 CAP-GLY domain containing linker protein 3 involved_in ISS
ISO		 GO_REF:0000024
(PMID:15262990)		 UniProt
RGD		 PMID:15262990 GO_REF:0000024 NCBI chr 1:85,547,170...85,563,187
Ensembl chr 1:85,547,206...85,563,184 		JBrowse link
G Golga7 golgin A7 involved_in ISS
ISO		 GO_REF:0000024
(PMID:16000296)		 CAFA
RGD		 PMID:16000296 GO_REF:0000024 NCBI chr16:68,767,259...68,782,536
Ensembl chr16:68,767,299...68,782,511 		JBrowse link
G Zdhhc1 zinc finger, DHHC-type containing 1 involved_in ISO (PMID:23687301) RGD PMID:23687301 NCBI chr19:33,350,533...33,375,717
Ensembl chr19:33,350,533...33,375,616 		JBrowse link
G Zdhhc12 zinc finger DHHC-type palmitoyltransferase 12 involved_in ISS
ISO		 GO_REF:0000024
(PMID:25025157)		 UniProt
RGD		 PMID:25025157 GO_REF:0000024 NCBI chr 3:13,363,504...13,366,383
Ensembl chr 3:13,363,504...13,366,474 		JBrowse link
G Zdhhc14 zinc finger DHHC-type palmitoyltransferase 14 involved_in ISO (PMID:27481942) RGD PMID:27481942 NCBI chr 1:46,069,127...46,340,806
Ensembl chr 1:46,069,127...46,330,488 		JBrowse link
G Zdhhc15 zinc finger DHHC-type palmitoyltransferase 15 involved_in ISS
ISO		 GO_REF:0000024
(PMID:15603741), (PMID:28167757)
(PMID:18817523)		 UniProt
RGD		 PMID:15603741 PMID:18817523 PMID:28167757 GO_REF:0000024 NCBI chr  X:69,568,086...69,701,756
Ensembl chr  X:69,574,124...69,701,756 		JBrowse link
G Zdhhc17 zinc finger DHHC-type palmitoyltransferase 17 involved_in ISO (PMID:28167757) RGD PMID:28167757 NCBI chr 7:46,369,963...46,433,691
Ensembl chr 7:46,369,988...46,433,764 		JBrowse link
G Zdhhc18 zinc finger DHHC-type palmitoyltransferase 18 involved_in ISS
ISO		 GO_REF:0000024
(PMID:27481942)		 UniProt
RGD		 PMID:27481942 GO_REF:0000024 NCBI chr 5:145,821,534...145,859,989
Ensembl chr 5:145,831,446...145,859,993 		JBrowse link
G Zdhhc19 zinc finger DHHC-type palmitoyltransferase 19 involved_in ISO (PMID:20074548) RGD PMID:20074548 NCBI chr11:68,277,847...68,289,110
Ensembl chr11:68,277,848...68,288,954 		JBrowse link
G Zdhhc2 zinc finger DHHC-type palmitoyltransferase 2 involved_in IMP
ISO		 PMID:19596852
(PMID:21343290), (PMID:25589740), (PMID:28167757)
(PMID:18296695), (PMID:18508921), (PMID:22034844), (PMID:23793055)		 RGD PMID:18296695 PMID:18508921 PMID:21343290 PMID:22034844 PMID:23793055 More... RGD:21201259 NCBI chr16:51,808,465...51,878,060
Ensembl chr16:51,808,468...51,878,060 		JBrowse link
G Zdhhc20 zinc finger DHHC-type palmitoyltransferase 20 involved_in ISO (PMID:29326245) RGD PMID:29326245 NCBI chr15:31,980,057...32,039,006
Ensembl chr15:31,983,155...32,038,989 		JBrowse link
G Zdhhc21 zinc finger DHHC-type palmitoyltransferase 21 involved_in ISO (PMID:22031296)
(PMID:26715683), (PMID:27653213)		 RGD PMID:22031296 PMID:26715683 PMID:27653213 NCBI chr 5:97,227,621...97,286,866
Ensembl chr 5:97,229,345...97,286,537 		JBrowse link
G Zdhhc3 zinc finger DHHC-type palmitoyltransferase 3 involved_in ISO (PMID:23687301), (PMID:23793055), (PMID:28167757) RGD PMID:23687301 PMID:23793055 PMID:28167757 NCBI chr 8:122,725,206...122,773,542
Ensembl chr 8:122,715,111...122,773,529 		JBrowse link
G Zdhhc7 zinc finger DHHC-type palmitoyltransferase 7 involved_in ISS
ISO		 GO_REF:0000024
(PMID:23687301), (PMID:27380321), (PMID:28057756), (PMID:28167757)
(PMID:22031296), (PMID:25301068), (PMID:27380321), (PMID:28196865)		 UniProt
RGD		 PMID:22031296 PMID:23687301 PMID:25301068 PMID:27380321 PMID:28057756 More... GO_REF:0000024 NCBI chr19:48,139,309...48,156,673
Ensembl chr19:48,139,527...48,156,673 		JBrowse link
G Zdhhc8 zinc finger DHHC-type palmitoyltransferase 8 involved_in ISO (PMID:19556522) RGD PMID:19556522 NCBI chr11:82,755,110...82,769,280
Ensembl chr11:82,755,143...82,767,734 		JBrowse link
G Zdhhc9 zinc finger DHHC-type palmitoyltransferase 9 involved_in ISO (PMID:16000296), (PMID:27481942) RGD PMID:16000296 PMID:27481942 NCBI chr  X:127,352,340...127,388,245
Ensembl chr  X:127,352,345...127,388,245 		JBrowse link
peptidyl-serine octanoylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mboat4 membrane bound O-acyltransferase domain containing 4 involved_in IDA
ISO		 PMID:18443287
(PMID:18267071), (PMID:18443287), (PMID:18669668), (PMID:19501572), (PMID:24045953), (PMID:28134508)
(PMID:18443287), (PMID:24045953), (PMID:25562443), (PMID:28134508)		 RGD PMID:18267071 PMID:18443287 PMID:18669668 PMID:19501572 PMID:24045953 More... RGD:8554475 NCBI chr16:58,064,178...58,077,523
Ensembl chr16:58,064,840...58,073,139 		JBrowse link
positive regulation of lipoprotein metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pemt phosphatidylethanolamine N-methyltransferase IMP RGD PMID:12091487 RGD:1626402 NCBI chr10:44,775,910...44,849,990
Ensembl chr10:44,775,911...44,850,013 		JBrowse link
positive regulation of protein lipidation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gba1 glucosylceramidase beta 1 involved_in ISO UniProtKB:P37840 (PMID:26392287) RGD PMID:26392287 NCBI chr 2:174,609,437...174,615,457
Ensembl chr 2:174,609,403...174,618,263 		JBrowse link
G Pik3c3 phosphatidylinositol 3-kinase, catalytic subunit type 3 acts_upstream_of_or_within ISO (PMID:25327288) RGD PMID:25327288 NCBI chr18:21,845,282...21,934,387
Ensembl chr18:21,845,295...21,929,048 		JBrowse link
G Rab3gap1 RAB3 GTPase activating protein catalytic subunit 1 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:25495476)		 GO_Central
Ensembl
RGD		 PMID:25495476 GO_REF:0000024 GO_REF:0000107 NCBI chr13:39,355,698...39,429,154
Ensembl chr13:39,352,247...39,429,169 		JBrowse link
G Rab3gap2 RAB3 GTPase activating non-catalytic protein subunit 2 involved_in ISO
ISS
IEA		 (PMID:25495476)
GO_REF:0000024
GO_REF:0000107		 RGD
GO_Central
Ensembl		 PMID:25495476 GO_REF:0000024 GO_REF:0000107 NCBI chr13:96,757,430...96,828,930
Ensembl chr13:96,757,460...96,829,478 		JBrowse link
G Svip small VCP interacting protein involved_in ISO
IEA		 (PMID:21909394)
GO_REF:0000107		 RGD
Ensembl		 PMID:21909394 GO_REF:0000107 NCBI chr 1:101,587,128...101,592,818
Ensembl chr 1:101,587,128...101,593,116 		JBrowse link
protein decanoylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mboat4 membrane bound O-acyltransferase domain containing 4 involved_in ISO (PMID:22975052) RGD PMID:22975052 NCBI chr16:58,064,178...58,077,523
Ensembl chr16:58,064,840...58,073,139 		JBrowse link
protein depalmitoleylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Notum NOTUM, palmitoleoyl-protein carboxylesterase involved_in ISO (PMID:25731175) RGD PMID:25731175 NCBI chr10:105,933,245...105,940,327
Ensembl chr10:105,933,249...105,940,315 		JBrowse link
protein depalmitoylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abhd10 abhydrolase domain containing 10, depalmitoylase involved_in ISS
ISO		 GO_REF:0000024
(PMID:31740833)		 UniProt
RGD		 PMID:31740833 GO_REF:0000024 NCBI chr11:55,081,273...55,095,044
Ensembl chr11:55,081,049...55,107,866 		JBrowse link
G Abhd12 abhydrolase domain containing 12, lysophospholipase involved_in ISO (PMID:27307232) RGD PMID:27307232 NCBI chr 3:139,659,315...139,719,529
Ensembl chr 3:139,659,317...139,719,564 		JBrowse link
G Abhd13 abhydrolase domain containing 13 involved_in ISO (PMID:27307232) RGD PMID:27307232 NCBI chr16:79,501,879...79,516,712
Ensembl chr16:79,501,727...79,516,748 		JBrowse link
G Abhd17a abhydrolase domain containing 17A, depalmitoylase involved_in IDA
ISO		 PMID:27307232
UniProtKB:Q5VST6|UniProtKB:Q6PCB6 (PMID:26701913)		 RGD PMID:26701913 PMID:27307232 RGD:13441201 NCBI chr 7:9,124,332...9,132,762
Ensembl chr 7:9,124,332...9,130,762 		JBrowse link
G Abhd17b abhydrolase domain containing 17B, depalmitoylase involved_in ISO UniProtKB:Q6PCB6|UniProtKB:Q96GS6 (PMID:26701913)
(PMID:27307232), (PMID:28521134)		 RGD PMID:26701913 PMID:27307232 PMID:28521134 NCBI chr 1:219,198,294...219,232,733
Ensembl chr 1:219,198,471...219,231,933 		JBrowse link
G Abhd17c abhydrolase domain containing 17C, depalmitoylase involved_in ISO UniProtKB:Q5VST6|UniProtKB:Q96GS6 (PMID:26701913)
(PMID:27307232)		 RGD PMID:26701913 PMID:27307232 NCBI chr 1:138,084,632...138,125,595
Ensembl chr 1:138,084,634...138,125,595 		JBrowse link
G Lypla1 lysophospholipase 1 involved_in
acts_upstream_of_or_within		 ISS
ISO		 GO_REF:0000024
(PMID:27307232)
(PMID:22399288)
(PMID:19439193), (PMID:27481942)		 UniProt
RGD		 PMID:19439193 PMID:22399288 PMID:27307232 PMID:27481942 GO_REF:0000024 NCBI chr 5:14,679,605...14,708,774
Ensembl chr 5:14,679,606...14,708,746 		JBrowse link
G Lypla2 lysophospholipase 2 involved_in ISS
ISO		 GO_REF:0000024
(PMID:27307232)
(PMID:28826475)		 UniProt
RGD		 PMID:27307232 PMID:28826475 GO_REF:0000024 NCBI chr 5:148,198,466...148,203,062
Ensembl chr 5:148,198,439...148,203,092 		JBrowse link
G Lyplal1 lysophospholipase-like 1 acts_upstream_of_or_within ISO (PMID:22399288) RGD PMID:22399288 NCBI chr13:97,626,568...97,657,901
Ensembl chr13:97,626,451...97,657,867 		JBrowse link
G Ppt1 palmitoyl-protein thioesterase 1 involved_in
acts_upstream_of_or_within		 ISS
ISO		 GO_REF:0000024
MGI:2176390 (PMID:11717424), (PMID:16242638)
(PMID:10658183), (PMID:10737604)
PMID:8895569		 UniProt
RGD		 PMID:10658183 PMID:10737604 PMID:11717424 PMID:16242638 PMID:8895569 GO_REF:0000024, RGD:8553248 NCBI chr 5:135,121,164...135,142,048
Ensembl chr 5:135,121,163...135,142,048 		JBrowse link
protein lipidation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca1 ATP binding cassette subfamily A member 1 acts_upstream_of_or_within ISO MGI:3577725 (PMID:16204232) RGD PMID:16204232 NCBI chr 5:67,678,267...67,801,162
Ensembl chr 5:67,681,297...67,801,170 		JBrowse link
G Alox12b arachidonate 12-lipoxygenase, 12R type involved_in ISS
ISO		 GO_REF:0000024
(PMID:21558561)		 UniProt
RGD		 PMID:21558561 GO_REF:0000024 NCBI chr10:53,863,060...53,874,938
Ensembl chr10:53,863,060...53,874,938 		JBrowse link
G Atg10 autophagy related 10 acts_upstream_of_or_within ISO (PMID:12890687) RGD PMID:12890687 NCBI chr 2:22,109,304...22,398,313
Ensembl chr 2:22,108,426...22,398,233 		JBrowse link
G Atg7 autophagy related 7 acts_upstream_of_or_within ISO (PMID:12890687) RGD PMID:12890687 NCBI chr 4:147,718,663...147,925,656
Ensembl chr 4:147,718,752...147,925,593 		JBrowse link
G Col6a1 collagen type VI alpha 1 chain acts_upstream_of_or_within ISO MGI:2153356 (PMID:26565691) RGD PMID:26565691 NCBI chr20:11,906,105...11,924,599
Ensembl chr20:11,905,957...11,924,597 		JBrowse link
G Mttp microsomal triglyceride transfer protein acts_upstream_of_or_within ISO (PMID:12072432) RGD PMID:12072432 NCBI chr 2:226,613,090...226,654,239
Ensembl chr 2:226,613,090...226,654,239 		JBrowse link
G Porcn porcupine O-acyltransferase involved_in ISO (PMID:17141155), (PMID:24798332) RGD PMID:17141155 PMID:24798332 NCBI chr  X:14,285,864...14,298,481
Ensembl chr  X:14,285,871...14,298,481 		JBrowse link
G Ugcg UDP-glucose ceramide glucosyltransferase involved_in ISS
ISO		 GO_REF:0000024
(PMID:23748427)		 UniProt
RGD		 PMID:23748427 GO_REF:0000024 NCBI chr 5:74,032,978...74,065,701
Ensembl chr 5:74,032,978...74,065,393 		JBrowse link
protein lipidation involved in autophagosome assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atg16l1 autophagy related 16-like 1 acts_upstream_of_or_within ISO (PMID:24954904) RGD PMID:24954904 NCBI chr 9:88,420,737...88,457,530
Ensembl chr 9:88,422,038...88,457,529 		JBrowse link
G Atg5 autophagy related 5 acts_upstream_of_or_within ISO (PMID:23918802) RGD PMID:23918802 NCBI chr20:47,798,217...47,889,216
Ensembl chr20:47,798,290...47,889,209 		JBrowse link
G Irgm immunity-related GTPase M involved_in ISO (PMID:28389568) RGD PMID:28389568 NCBI chr10:33,233,513...33,241,594
Ensembl chr10:33,233,455...33,241,578 		JBrowse link
G Wipi2 WD repeat domain, phosphoinositide interacting 2 acts_upstream_of_or_within ISO (PMID:24954904) RGD PMID:24954904 NCBI chr12:11,911,369...11,939,799
Ensembl chr12:11,911,337...11,939,794 		JBrowse link
protein octanoylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mboat4 membrane bound O-acyltransferase domain containing 4 involved_in ISO (PMID:22975052) RGD PMID:22975052 NCBI chr16:58,064,178...58,077,523
Ensembl chr16:58,064,840...58,073,139 		JBrowse link
protein palmitoleylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Porcn porcupine O-acyltransferase involved_in ISO (PMID:17141155), (PMID:24798332) RGD PMID:17141155 PMID:24798332 NCBI chr  X:14,285,864...14,298,481
Ensembl chr  X:14,285,871...14,298,481 		JBrowse link
protein palmitoylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Glul glutamate-ammonia ligase involved_in ISS
ISO		 GO_REF:0000024
(PMID:30158707)		 UniProt
RGD		 PMID:30158707 GO_REF:0000024 NCBI chr13:65,969,053...66,035,121
Ensembl chr13:66,025,630...66,035,108 		JBrowse link
G Hhat hedgehog acyltransferase acts_upstream_of_or_within ISO MGI:3051900|MGI:3051901 (PMID:15075292) RGD PMID:15075292 NCBI chr13:104,024,507...104,283,580
Ensembl chr13:104,010,916...104,282,893 		JBrowse link
G Selenok selenoprotein K involved_in
acts_upstream_of_or_within		 ISS
ISO		 GO_REF:0000024
(PMID:25368151)
MGI:4941878 (PMID:23444136)		 UniProt
RGD		 PMID:23444136 PMID:25368151 GO_REF:0000024 NCBI chr16:5,152,066...5,160,648
Ensembl chr16:5,152,066...5,159,188 		JBrowse link
G Zdhhc1 zinc finger, DHHC-type containing 1 involved_in
acts_upstream_of_or_within		 ISO (PMID:23034182)
(PMID:15603741)		 RGD PMID:15603741 PMID:23034182 NCBI chr19:33,350,533...33,375,717
Ensembl chr19:33,350,533...33,375,616 		JBrowse link
G Zdhhc12 zinc finger DHHC-type palmitoyltransferase 12 involved_in ISO (PMID:23034182) RGD PMID:23034182 NCBI chr 3:13,363,504...13,366,383
Ensembl chr 3:13,363,504...13,366,474 		JBrowse link
G Zdhhc14 zinc finger DHHC-type palmitoyltransferase 14 involved_in ISO (PMID:23034182) RGD PMID:23034182 NCBI chr 1:46,069,127...46,340,806
Ensembl chr 1:46,069,127...46,330,488 		JBrowse link
G Zdhhc15 zinc finger DHHC-type palmitoyltransferase 15 involved_in
acts_upstream_of_or_within		 ISO (PMID:23034182)
(PMID:18596047)
(PMID:15603741)		 RGD PMID:15603741 PMID:18596047 PMID:23034182 NCBI chr  X:69,568,086...69,701,756
Ensembl chr  X:69,574,124...69,701,756 		JBrowse link
G Zdhhc16 zinc finger DHHC-type palmitoyltransferase 16 involved_in ISO (PMID:23034182), (PMID:28826475)
(PMID:26644582)		 RGD PMID:23034182 PMID:26644582 PMID:28826475 NCBI chr 1:240,745,606...240,757,009
Ensembl chr 1:240,745,641...240,757,009 		JBrowse link
G Zdhhc17 zinc finger DHHC-type palmitoyltransferase 17 involved_in
acts_upstream_of_or_within		 ISS
ISO		 GO_REF:0000024
(PMID:18596047), (PMID:25253725)
(PMID:15603741)
(PMID:23034182), (PMID:24705354)		 UniProt
RGD		 PMID:15603741 PMID:18596047 PMID:23034182 PMID:24705354 PMID:25253725 GO_REF:0000024 NCBI chr 7:46,369,963...46,433,691
Ensembl chr 7:46,369,988...46,433,764 		JBrowse link
G Zdhhc18 zinc finger DHHC-type palmitoyltransferase 18 involved_in ISO (PMID:23034182) RGD PMID:23034182 NCBI chr 5:145,821,534...145,859,989
Ensembl chr 5:145,831,446...145,859,993 		JBrowse link
G Zdhhc2 zinc finger DHHC-type palmitoyltransferase 2 involved_in
acts_upstream_of_or_within		 ISO (PMID:23034182)
(PMID:15603741)		 RGD PMID:15603741 PMID:23034182 NCBI chr16:51,808,465...51,878,060
Ensembl chr16:51,808,468...51,878,060 		JBrowse link
G Zdhhc20 zinc finger DHHC-type palmitoyltransferase 20 involved_in ISO (PMID:23034182), (PMID:33219126) RGD PMID:23034182 PMID:33219126 NCBI chr15:31,980,057...32,039,006
Ensembl chr15:31,983,155...32,038,989 		JBrowse link
G Zdhhc21 zinc finger DHHC-type palmitoyltransferase 21 involved_in
acts_upstream_of_or_within		 ISO (PMID:23034182)
MGI:1856841 (PMID:19997487)		 RGD PMID:19997487 PMID:23034182 NCBI chr 5:97,227,621...97,286,866
Ensembl chr 5:97,229,345...97,286,537 		JBrowse link
G Zdhhc22 zinc finger DHHC-type palmitoyltransferase 22 involved_in
acts_upstream_of_or_within		 ISO (PMID:22399288) RGD PMID:22399288 NCBI chr 6:106,629,090...106,646,996
Ensembl chr 6:106,631,609...106,638,872 		JBrowse link
G Zdhhc23 zinc finger DHHC-type palmitoyltransferase 23 involved_in
acts_upstream_of_or_within		 ISO (PMID:22399288) RGD PMID:22399288 NCBI chr11:56,718,702...56,735,063
Ensembl chr11:56,718,826...56,734,194 		JBrowse link
G Zdhhc3 zinc finger DHHC-type palmitoyltransferase 3 involved_in
acts_upstream_of_or_within		 ISO (PMID:19001095), (PMID:21926431), (PMID:23034182)
(PMID:17151279), (PMID:18596047), (PMID:19001095), (PMID:25253725), (PMID:27613864)
(PMID:15603741)		 RGD PMID:15603741 PMID:17151279 PMID:18596047 PMID:19001095 PMID:21926431 More... NCBI chr 8:122,725,206...122,773,542
Ensembl chr 8:122,715,111...122,773,529 		JBrowse link
G Zdhhc5 zinc finger DHHC-type palmitoyltransferase 5 acts_upstream_of_or_within
involved_in		 ISO (PMID:22325201)
(PMID:21820437), (PMID:22325201)
(PMID:23034182)		 RGD PMID:21820437 PMID:22325201 PMID:23034182 NCBI chr 3:69,772,037...69,800,142
Ensembl chr 3:69,771,890...69,799,921 		JBrowse link
G Zdhhc6 zinc finger DHHC-type palmitoyltransferase 6 involved_in ISO (PMID:22728137), (PMID:23034182), (PMID:25368151), (PMID:28826475)
(PMID:25368151)		 RGD PMID:22728137 PMID:23034182 PMID:25368151 PMID:28826475 NCBI chr 1:254,335,472...254,356,141
Ensembl chr 1:254,335,113...254,356,108 		JBrowse link
G Zdhhc7 zinc finger DHHC-type palmitoyltransferase 7 involved_in
acts_upstream_of_or_within		 ISS
ISO		 GO_REF:0000024
(PMID:18596047), (PMID:19001095), (PMID:25253725)
(PMID:15603741)
(PMID:19001095), (PMID:23034182)		 UniProt
RGD		 PMID:15603741 PMID:18596047 PMID:19001095 PMID:23034182 PMID:25253725 GO_REF:0000024 NCBI chr19:48,139,309...48,156,673
Ensembl chr19:48,139,527...48,156,673 		JBrowse link
G Zdhhc8 zinc finger DHHC-type palmitoyltransferase 8 involved_in ISO (PMID:23034182) RGD PMID:23034182 NCBI chr11:82,755,110...82,769,280
Ensembl chr11:82,755,143...82,767,734 		JBrowse link
G Zdhhc9 zinc finger DHHC-type palmitoyltransferase 9 involved_in ISO (PMID:23034182) RGD PMID:23034182 NCBI chr  X:127,352,340...127,388,245
Ensembl chr  X:127,352,345...127,388,245 		JBrowse link
protein stearoylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Zdhhc6 zinc finger DHHC-type palmitoyltransferase 6 involved_in ISO (PMID:26214738) RGD PMID:26214738 NCBI chr 1:254,335,472...254,356,141
Ensembl chr 1:254,335,113...254,356,108 		JBrowse link
regulation of lipoprotein lipid oxidation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lep leptin IDA RGD PMID:21068181 RGD:5128556 NCBI chr 4:57,661,127...57,675,262
Ensembl chr 4:57,661,131...57,675,262 		JBrowse link
regulation of lipoprotein metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Angptl8 angiopoietin-like 8 acts_upstream_of_or_within
involved_in		 ISO (PMID:23150577)
(PMID:24043787)		 RGD PMID:23150577 PMID:24043787 NCBI chr 8:20,376,462...20,378,488
Ensembl chr 8:20,376,462...20,378,490 		JBrowse link
G Dgat2 diacylglycerol O-acyltransferase 2 IMP RGD PMID:17526931 RGD:10400884 NCBI chr 1:153,454,078...153,484,432
Ensembl chr 1:153,454,080...153,484,428 		JBrowse link
G Lipg lipase G, endothelial type acts_upstream_of_or_within ISO MGI:2450672 (PMID:17681148) RGD PMID:17681148 NCBI chr18:68,514,923...68,536,105
Ensembl chr18:68,514,923...68,536,260 		JBrowse link
regulation of protein lipidation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atg101 autophagy related 101 involved_in ISO
IEA		 (PMID:19225151)
GO_REF:0000107		 RGD
Ensembl		 PMID:19225151 GO_REF:0000107 NCBI chr 7:132,398,477...132,407,643
Ensembl chr 7:132,398,483...132,407,633 		JBrowse link
G Atg13 autophagy related 13 involved_in ISO (PMID:19225151) RGD PMID:19225151 NCBI chr 3:77,647,069...77,681,028
Ensembl chr 3:77,645,790...77,681,043 		JBrowse link
G Rabl3 RAB, member of RAS oncogene family-like 3 involved_in ISO (PMID:31406347) RGD PMID:31406347 NCBI chr11:63,153,281...63,182,240
Ensembl chr11:63,152,792...63,182,671 		JBrowse link
G Rb1cc1 RB1-inducible coiled-coil 1 involved_in ISO (PMID:19225151) RGD PMID:19225151 NCBI chr 5:13,161,648...13,225,560
Ensembl chr 5:13,161,648...13,225,560 		JBrowse link
G Ulk1 unc-51 like autophagy activating kinase 1 involved_in ISO (PMID:19225151) RGD PMID:19225151 NCBI chr12:45,851,710...45,877,966
Ensembl chr12:45,851,710...45,877,966 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20076
    cellular process 19155
      metabolic process 11953
        primary metabolic process 10582
          protein metabolic process 5297
            lipoprotein metabolic process 106
              lipoprotein biosynthetic process + 60
              lipoprotein catabolic process + 18
              lipoprotein modification + 3
              negative regulation of lipoprotein metabolic process + 5
              positive regulation of lipoprotein metabolic process + 6
              regulation of lipoprotein metabolic process + 20
paths to the root