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ONTOLOGY REPORT - ANNOTATIONS


Term:retrograde transport, endosome to Golgi
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Accession:GO:0042147 term browser browse the term
Definition:The directed movement of membrane-bounded vesicles from endosomes back to the trans-Golgi network where they are recycled for further rounds of transport.


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retrograde transport, endosome to Golgi term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ankfy1 ankyrin repeat and FYVE domain containing 1 involved_in ISO (PMID:22284051) UniProt PMID:22284051 NCBI chrNW_004936677:746,408...836,495 JBrowse link
G Ap1s1 adaptor related protein complex 1 subunit sigma 1 acts_upstream_of_or_within ISO (MGI:5608551|PMID:24928897) MGI PMID:24928897 MGI:5608551 NCBI chrNW_004936543:1,052,692...1,058,070 JBrowse link
G Arfrp1 ADP ribosylation factor related protein 1 involved_in ISO (PMID:16129887) UniProt PMID:16129887 NCBI chrNW_004936514:10,956,111...10,964,756 JBrowse link
G Arl1 ADP ribosylation factor like GTPase 1 involved_in ISO (PMID:19224922) UniProt PMID:19224922 NCBI chrNW_004936492:12,583,878...12,595,824 JBrowse link
G Baiap3 BAI1 associated protein 3 involved_in ISO (PMID:28626000) UniProt PMID:28626000 NCBI chrNW_004936694:2,542,521...2,556,540 JBrowse link
G Bet1l Bet1 golgi vesicular membrane trafficking protein like involved_in ISO (PMID:15215310) HGNC-UCL PMID:15215310 NCBI chrNW_004936888:42,646...56,589 JBrowse link
G Cln5 CLN5 intracellular trafficking protein involved_in ISO (PMID:22431521) UniProt PMID:22431521 NCBI chrNW_004936511:4,283,016...4,291,968 JBrowse link
G Cltc clathrin heavy chain involved_in ISO (PMID:20065094) UniProt PMID:20065094 NCBI chrNW_004936490:3,659,682...3,726,222 JBrowse link
G Cltcl1 clathrin heavy chain like 1 involved_in ISO (PMID:20065094) UniProt PMID:20065094 NCBI chrNW_004936619:3,181,890...3,276,305 JBrowse link
G Dctn1 dynactin subunit 1 involved_in ISO (PMID:19619496) UniProt PMID:19619496 NCBI chrNW_004936556:601,550...632,321 JBrowse link
G Dennd2a DENN domain containing 2A involved_in ISO (PMID:20937701) UniProt PMID:20937701 NCBI chrNW_004936592:4,583,826...4,647,928 JBrowse link
G Dennd5a DENN domain containing 5A involved_in ISO (PMID:19619496) UniProt PMID:19619496 NCBI chrNW_004936528:8,860,731...8,948,848 JBrowse link
G Erc1 ELKS/RAB6-interacting/CAST family member 1 acts_upstream_of_or_within ISO (MGI:2182501|PMID:11929610) MGI PMID:11929610 MGI:2182501 NCBI chrNW_004936606:1,201,420...1,713,894 JBrowse link
G Evi5 ecotropic viral integration site 5 involved_in ISO (PMID:17562788) UniProt PMID:17562788 NCBI chrNW_004936537:6,385,144...6,585,522 JBrowse link
G Gbf1 golgi brefeldin A resistant guanine nucleotide exchange factor 1 involved_in ISO (PMID:12808027) UniProt PMID:12808027 NCBI chrNW_004936600:3,479,045...3,604,241 JBrowse link
G Gcc2 GRIP and coiled-coil domain containing 2 involved_in ISO (PMID:17488291) UniProt PMID:17488291 NCBI chrNW_004936829:13,235...61,556 JBrowse link
G Gga1 golgi associated, gamma adaptin ear containing, ARF binding protein 1 involved_in ISO (PMID:15886016) UniProt PMID:15886016 NCBI chrNW_004936492:3,445,271...3,464,960 JBrowse link
G Gosr1 golgi SNAP receptor complex member 1 involved_in ISO (PMID:15215310) HGNC-UCL PMID:15215310 NCBI chrNW_004936538:6,461,676...6,505,967 JBrowse link
G LOC101961559 E3 ubiquitin-protein ligase RNF126 involved_in ISO (PMID:24275455) UniProt PMID:24275455 NCBI chrNW_004936588:231,723...237,969 JBrowse link
G Magel2 MAGE family member L2 involved_in ISO (PMID:23452853) UniProt PMID:23452853 NCBI chrNW_004936805:882,296...886,442 JBrowse link
G Pheta1 PH domain containing endocytic trafficking adaptor 1 involved_in ISO (PMID:21233288) UniProt PMID:21233288 NCBI chrNW_004936558:4,066,832...4,073,906 JBrowse link
G Pheta2 PH domain containing endocytic trafficking adaptor 2 involved_in ISO (PMID:21233288) UniProt PMID:21233288 NCBI chrNW_004936718:50,354...55,699 JBrowse link
G Pikfyve phosphoinositide kinase, FYVE-type zinc finger containing involved_in ISO (PMID:14551253), (PMID:16954148) UniProt PMID:14551253 PMID:16954148 NCBI chrNW_004936950:242,071...323,204 JBrowse link
G Prepl prolyl endopeptidase like involved_in ISO (MGI:6316362|PMID:23321636) UniProt PMID:23321636 MGI:6316362 NCBI chrNW_004936508:7,637,844...7,674,232 JBrowse link
G Rab29 RAB29, member RAS oncogene family involved_in ISO (PMID:24788816) UniProt PMID:24788816 NCBI chrNW_004936557:6,673,092...6,679,715 JBrowse link
G Rab7a RAB7A, member RAS oncogene family involved_in ISO (PMID:19531583) UniProt PMID:19531583 NCBI chrNW_004936798:297,600...304,929 JBrowse link
G Rgp1 RGP1 homolog, RAB6A GEF complex partner 1 involved_in ISO (PMID:23091056) UniProt PMID:23091056 NCBI chrNW_004936524:3,742,590...3,746,371 JBrowse link
G Rhobtb3 Rho related BTB domain containing 3 involved_in ISO (PMID:19490898) UniProt PMID:19490898 NCBI chrNW_004936523:7,562,054...7,618,380 JBrowse link
G Ric1 RIC1 homolog, RAB6A GEF complex partner 1 involved_in ISO (PMID:23091056) UniProt PMID:23091056 NCBI chrNW_004936539:290,429...404,928 JBrowse link
G Snx1 sorting nexin 1 involved_in ISO (PMID:18088323) UniProt PMID:18088323 NCBI chrNW_004936471:24,569,677...24,617,016 JBrowse link
G Snx2 sorting nexin 2 involved_in ISO (PMID:20138391) UniProt PMID:20138391 NCBI chrNW_004936575:3,150,409...3,223,420 JBrowse link
G Snx5 sorting nexin 5 involved_in ISO (PMID:17148574) UniProt PMID:17148574 NCBI chrNW_004936485:2,167,987...2,191,157 JBrowse link
G Snx6 sorting nexin 6 involved_in ISO (PMID:19935774) UniProt PMID:19935774 NCBI chrNW_004936494:8,819,695...8,880,298 JBrowse link
G Spag9 sperm associated antigen 9 acts_upstream_of_or_within ISO (PMID:19056739) MGI PMID:19056739 NCBI chrNW_004936490:10,663,155...10,796,658 JBrowse link
G Stx10 syntaxin 10 involved_in ISO (PMID:18195106) UniProt PMID:18195106 NCBI chrNW_004936659:2,168,272...2,175,803 JBrowse link
G Stx16 syntaxin 16 involved_in ISO (PMID:17389686)
(PMID:15215310), (PMID:18195106)
UniProt PMID:15215310 PMID:17389686 PMID:18195106 NCBI chrNW_004936530:1,231,033...1,247,961 JBrowse link
G Stx5 syntaxin 5 involved_in ISO (PMID:15215310) HGNC-UCL PMID:15215310 NCBI chrNW_004936581:462,417...487,563 JBrowse link
G Stx6 syntaxin 6 involved_in ISO (PMID:19224922) UniProt PMID:19224922 NCBI chrNW_004936481:8,362,059...8,405,228 JBrowse link
G Tbc1d10a TBC1 domain family member 10A involved_in ISO (PMID:17562788) UniProt PMID:17562788 NCBI chrNW_004936904:357,621...370,006 JBrowse link
G Tbc1d10b TBC1 domain family member 10B involved_in ISO (PMID:17562788) UniProt PMID:17562788 NCBI chrNW_004936501:12,830,307...12,841,372 JBrowse link
G Tbc1d10c TBC1 domain family member 10C involved_in ISO (PMID:17562788) UniProt PMID:17562788 NCBI chrNW_004936599:2,338,131...2,344,134 JBrowse link
G Tbc1d17 TBC1 domain family member 17 involved_in ISO (PMID:17562788) UniProt PMID:17562788 NCBI chrNW_004936664:3,664,423...3,674,890 JBrowse link
G Tbc1d23 TBC1 domain family member 23 involved_in ISO (PMID:29084197) UniProt PMID:29084197 NCBI chrNW_004936630:2,977,477...3,049,209 JBrowse link
G Tbc1d5 TBC1 domain family member 5 involved_in ISO (PMID:22354992) UniProt PMID:22354992 NCBI chrNW_004936473:9,868,657...10,294,554 JBrowse link
G Tmem87a transmembrane protein 87A involved_in ISO (PMID:26157166) UniProt PMID:26157166 NCBI chrNW_004936471:5,517,362...5,578,290 JBrowse link
G Tmem87b transmembrane protein 87B involved_in ISO (PMID:26157166) UniProt PMID:26157166 NCBI chrNW_004936783:726,821...775,597 JBrowse link
G Trim27 tripartite motif containing 27 involved_in ISO (PMID:23452853) UniProt PMID:23452853 NCBI chrNW_004936914:245,348...263,060 JBrowse link
G Ube2o ubiquitin conjugating enzyme E2 O involved_in ISO (PMID:23452853) UniProt PMID:23452853 NCBI chrNW_004936594:1,490,257...1,554,610 JBrowse link
G Vamp3 vesicle associated membrane protein 3 involved_in ISO (PMID:18195106) UniProt PMID:18195106 NCBI chrNW_004936623:2,280,534...2,287,898 JBrowse link
G Vps26a VPS26, retromer complex component A involved_in
acts_upstream_of_or_within
ISO (PMID:15078903)
(MGI:3040541|PMID:15078902)
UniProt
MGI
PMID:15078902 PMID:15078903 MGI:3040541 NCBI chrNW_004936521:9,269,714...9,308,016 JBrowse link
G Vps26b VPS26, retromer complex component B involved_in ISO (MGI:5607223|PMID:21920005) UniProt PMID:21920005 MGI:5607223 NCBI chrNW_004936684:1,597,706...1,617,689 JBrowse link
G Vps35 VPS35 retromer complex component involved_in ISO (PMID:15078903), (PMID:26618722), (PMID:27385586)
PMID:23395371
UniProt
ParkinsonsUK-UCL
PMID:15078903 PMID:23395371 PMID:26618722 PMID:27385586 RGD:8553873 NCBI chrNW_004936475:50,476...77,797 JBrowse link
G Vps50 VPS50 subunit of EARP/GARPII complex NOT|involved_in ISO (PMID:25799061) UniProt PMID:25799061 NCBI chrNW_004936803:530,543...651,461 JBrowse link
G Vps51 VPS51 subunit of GARP complex involved_in
acts_upstream_of_or_within
ISO (PMID:20685960)
(PMID:25799061)
UniProt
MGI
PMID:20685960 PMID:25799061 NCBI chrNW_004936599:4,258,239...4,274,823 JBrowse link
G Vps53 VPS53 subunit of GARP complex involved_in ISO (PMID:25799061) UniProt PMID:25799061 NCBI chrNW_004936538:7,067,332...7,207,852 JBrowse link
G Vps54 VPS54 subunit of GARP complex acts_upstream_of_or_within ISO (PMID:25799061) MGI PMID:25799061 NCBI chrNW_004936491:8,835,397...8,922,403 JBrowse link
G Vti1a vesicle transport through interaction with t-SNAREs 1A involved_in ISO (PMID:19224922)
(PMID:15215310), (PMID:18195106)
UniProt PMID:15215310 PMID:18195106 PMID:19224922 NCBI chrNW_004936486:3,010,169...3,353,512 JBrowse link
G Washc1 WASH complex subunit 1 involved_in ISO (PMID:19922874)
(PMID:23452853)
UniProt PMID:19922874 PMID:23452853 NCBI chrNW_004936606:209,289...228,986 JBrowse link
G Ykt6 YKT6 v-SNARE homolog involved_in ISO (PMID:15215310) HGNC-UCL PMID:15215310 NCBI chrNW_004936478:19,166,225...19,179,060 JBrowse link
early endosome to Golgi transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ehd3 EH domain containing 3 involved_in ISO (PMID:19139087) UniProt PMID:19139087 NCBI chrNW_004936493:1,864,836...1,896,079 JBrowse link
G Lman1 lectin, mannose binding 1 NOT|involved_in ISO (PMID:18287528) UniProt PMID:18287528 NCBI chrNW_004936497:5,383,636...5,409,347 JBrowse link
G Rab6a RAB6A, member RAS oncogene family involved_in ISO (PMID:17562788) UniProt PMID:17562788 NCBI chrNW_004936498:2,840,141...2,907,227 JBrowse link
G Rbsn rabenosyn, RAB effector involved_in ISO (PMID:19139087) UniProt PMID:19139087 NCBI chrNW_004936602:586,284...607,088 JBrowse link
G Snx1 sorting nexin 1 involved_in ISO (PMID:15498486) UniProt PMID:15498486 NCBI chrNW_004936471:24,569,677...24,617,016 JBrowse link
G Snx8 sorting nexin 8 involved_in ISO (PMID:19782049) UniProt PMID:19782049 NCBI chrNW_004936823:18,972...62,924 JBrowse link
G Stx10 syntaxin 10 NOT|involved_in ISO (PMID:16154903) UniProt PMID:16154903 NCBI chrNW_004936659:2,168,272...2,175,803 JBrowse link
G Stx5 syntaxin 5 involved_in ISO (PMID:17389686) UniProt PMID:17389686 NCBI chrNW_004936581:462,417...487,563 JBrowse link
G Surf4 surfeit 4 NOT|involved_in ISO (PMID:18287528) UniProt PMID:18287528 NCBI chrNW_004936669:3,518,616...3,523,808 JBrowse link
late endosome to Golgi transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gcc2 GRIP and coiled-coil domain containing 2 involved_in ISO (PMID:16885419) UniProt PMID:16885419 NCBI chrNW_004936829:13,235...61,556 JBrowse link
G Rab7b RAB7B, member RAS oncogene family involved_in ISO (PMID:20375062) UniProt PMID:20375062 NCBI chrNW_004936557:6,504,562...6,519,219 JBrowse link
G Sgsm2 small G protein signaling modulator 2 involved_in ISO (PMID:21808068) UniProt PMID:21808068 NCBI chrNW_004936538:8,395,902...8,436,616 JBrowse link
negative regulation of retrograde transport, endosome to Golgi term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arfip1 ADP ribosylation factor interacting protein 1 involved_in ISO (PMID:25789876) CACAO PMID:25789876 NCBI chrNW_004936689:2,671,204...2,781,107 JBrowse link
positive regulation of retrograde transport, endosome to Golgi term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eipr1 EARP complex and GARP complex interacting protein 1 involved_in ISO (PMID:27440922) UniProt PMID:27440922 NCBI chrNW_004936532:1,501,132...1,613,043 JBrowse link
recycling endosome to Golgi transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gcc2 GRIP and coiled-coil domain containing 2 involved_in ISO (PMID:17488291) UniProt PMID:17488291 NCBI chrNW_004936829:13,235...61,556 JBrowse link
G Tbc1d14 TBC1 domain family member 14 involved_in ISO (PMID:17562788) UniProt PMID:17562788 NCBI chrNW_004936477:18,761,034...18,864,578 JBrowse link
regulation of retrograde transport, endosome to Golgi term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp9a ATPase phospholipid transporting 9A (putative) involved_in ISO (PMID:30213940) UniProt PMID:30213940 NCBI chrNW_004936514:3,341,207...3,428,948 JBrowse link
G Lrrk2 leucine rich repeat kinase 2 involved_in ISO (PMID:23395371) ParkinsonsUK-UCL PMID:23395371 NCBI chrNW_004936607:628,469...761,117 JBrowse link
G Rab29 RAB29, member RAS oncogene family involved_in ISO PMID:23395371 ParkinsonsUK-UCL PMID:23395371 RGD:8553873 NCBI chrNW_004936557:6,673,092...6,679,715 JBrowse link
G Usp7 ubiquitin specific peptidase 7 involved_in ISO (PMID:26365382) UniProt PMID:26365382 NCBI chrNW_004936530:7,693,681...7,724,215 JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 12298
    cellular process 11515
      vesicle-mediated transport 1158
        endosomal transport 178
          retrograde transport, endosome to Golgi 73
            early endosome to Golgi transport 9
            late endosome to Golgi transport 3
            negative regulation of retrograde transport, endosome to Golgi 1
            positive regulation of retrograde transport, endosome to Golgi 1
            recycling endosome to Golgi transport 2
            regulation of retrograde transport, endosome to Golgi + 6
Path 2
Term Annotations click to browse term
  biological_process 12298
    localization 4949
      establishment of localization 3527
        transport 3366
          vesicle-mediated transport 1158
            endosomal transport 178
              retrograde transport, endosome to Golgi 73
                early endosome to Golgi transport 9
                late endosome to Golgi transport 3
                negative regulation of retrograde transport, endosome to Golgi 1
                positive regulation of retrograde transport, endosome to Golgi 1
                recycling endosome to Golgi transport 2
                regulation of retrograde transport, endosome to Golgi + 6
paths to the root