Send us a Message



 Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap)  (beta) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer) Overgo Probe Designer
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease COVID-19 Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models PhenoMiner (Quantitative Phenotypes) Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes GERRC (Gene Editing Rat Resource Center) Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Poster Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

ONTOLOGY REPORT - ANNOTATIONS

Term:neurotransmitter metabolic process
go back to main search page
Accession:GO:0042133 term browser browse the term
Definition:The chemical reactions and pathways involving neurotransmitters, any of a group of substances that are released on excitation from the axon terminal of a presynaptic neuron of the central or peripheral nervous system and travel across the synaptic cleft to either excite or inhibit the target cell.
Synonyms:exact_synonym: neurotransmitter metabolism
 never_in_taxon: NCBITaxon:4895 ! Schizosaccharomyces


show annotations for term's descendants           Sort by:
neurotransmitter metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CLN3 CLN3 lysosomal/endosomal transmembrane protein, battenin acts_upstream_of_or_within ISO (MGI:3616353|PMID:16239221) MGI PMID:16239221 MGI:3616353
acetylcholine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CHAT choline O-acetyltransferase ISO RGD PMID:126256 PMID:334962 PMID:4008917 PMID:6854006 RGD:2301195 RGD:2301197 RGD:2301199 RGD:2301203 NCBI chr10:44,574,925...44,629,618 JBrowse link
G SLC44A4 solute carrier family 44 member 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:31,526,660...31,542,165
Ensembl chr 6:32,413,441...32,428,550 		JBrowse link
G SLC5A7 solute carrier family 5 member 7 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3044863|PMID:15173594) MGI
Ensembl		 PMID:15173594 GO_REF:0000107 MGI:3044863 NCBI chr2A:93,917,086...93,944,308
Ensembl chr2A:109,017,805...109,046,860 		JBrowse link
acetylcholine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACHE acetylcholinesterase (Cartwright blood group) involved_in
acts_upstream_of_or_within		 ISO
IEA		 (MGI:3654414|PMID:16434405), (MGI:65815|PMID:7512968) RGD
Ensembl
MGI		 PMID:126256 PMID:334962 PMID:1133098 PMID:2731551 PMID:3655326 More... GO_REF:0000107 MGI:3654414 MGI:65815 RGD:1580870 RGD:2301187 RGD:2301195 RGD:2301197 RGD:2301199 RGD:2301203 RGD:2301204 RGD:2301205 RGD:2301207 RGD:2301213 NCBI chr 7:92,915,065...92,922,079
Ensembl chr 7:106,311,944...106,318,184 		JBrowse link
acetylcholine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACHE acetylcholinesterase (Cartwright blood group) ISO RGD PMID:16628397 RGD:1580871 NCBI chr 7:92,915,065...92,922,079
Ensembl chr 7:106,311,944...106,318,184 		JBrowse link
histamine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HNMT histamine N-methyltransferase involved_in IEA Ensembl GO_REF:0000107 NCBI chr2B:21,840,342...21,892,744
Ensembl chr2B:142,036,321...142,088,315 		JBrowse link
neurotransmitter biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALDH9A1 aldehyde dehydrogenase 9 family member A1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:141,094,261...141,130,613
Ensembl chr 1:144,883,839...144,919,670 		JBrowse link
G DAGLA diacylglycerol lipase alpha acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:4437165|PMID:20147530) MGI
Ensembl		 PMID:20147530 GO_REF:0000107 MGI:4437165 NCBI chr11:56,979,558...57,046,589
Ensembl chr11:60,378,493...60,407,095 		JBrowse link
G DAGLB diacylglycerol lipase beta acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:4437165|PMID:20147530) MGI
Ensembl		 PMID:20147530 GO_REF:0000107 MGI:4437165 NCBI chr 7:6,995,425...7,034,279
Ensembl chr 7:6,605,250...6,634,169 		JBrowse link
G GAD1 glutamate decarboxylase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2B:58,100,623...58,145,045
Ensembl chr2B:175,558,538...175,602,944 		JBrowse link
G GAD2 glutamate decarboxylase 2 involved_in ISO PMID:8336154 SynGO PMID:8336154 RGD:155230743 NCBI chr10:26,392,877...26,481,859
Ensembl chr10:26,759,243...26,843,197 		JBrowse link
G TH tyrosine hydroxylase involved_in IEA UniProt GO_REF:0000043 NCBI chr11:2,204,820...2,212,750
Ensembl chr11:2,231,248...2,242,433 		JBrowse link
neurotransmitter catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABAT 4-aminobutyrate aminotransferase involved_in IEA UniProt GO_REF:0000043 NCBI chr16:7,609,282...7,718,049
Ensembl chr16:8,888,178...8,958,420 		JBrowse link
G ALDH5A1 aldehyde dehydrogenase 5 family member A1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3050939|PMID:15262267) MGI
Ensembl		 PMID:15262267 GO_REF:0000107 MGI:3050939 NCBI chr 6:24,332,093...24,370,764
Ensembl chr 6:24,665,026...24,705,151 		JBrowse link
G COMT catechol-O-methyltransferase involved_in IEA UniProt
Ensembl
InterPro		 GO_REF:0000002 GO_REF:0000043 GO_REF:0000104 GO_REF:0000107 NCBI chr22:2,704,015...2,731,326
Ensembl chr22:18,375,434...18,402,387 		JBrowse link
G MAOB monoamine oxidase B ISO RGD PMID:18539264 RGD:2316732 NCBI chr  X:36,217,710...36,333,516
Ensembl chr  X:44,042,000...44,157,941 		JBrowse link
G NAALAD2 N-acetylated alpha-linked acidic dipeptidase 2 acts_upstream_of_or_within ISO (MGI:3043497|PMID:15086519), (MGI:5306875|PMID:21908619) MGI PMID:15086519 PMID:21908619 MGI:3043497 MGI:5306875 NCBI chr11:85,105,296...85,163,280
Ensembl chr11:88,600,918...88,658,985 		JBrowse link
octopamine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DBH dopamine beta-hydroxylase ISO RGD PMID:11521740 RGD:1625401 NCBI chr 9:104,761,504...104,784,445
Ensembl chr 9:133,371,821...133,393,697 		JBrowse link
positive regulation of acetylcholine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PEBP1 phosphatidylethanolamine binding protein 1 ISO RGD PMID:8888012 RGD:2302806 NCBI chr12:115,716,953...115,726,412
Ensembl chr12:119,093,952...119,105,054 		JBrowse link
regulation of acetylcholine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FSHR follicle stimulating hormone receptor acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3628883|PMID:12204217) MGI
Ensembl		 PMID:12204217 GO_REF:0000107 MGI:3628883 NCBI chr2A:49,088,450...49,287,688
Ensembl chr2A:50,008,328...50,207,258 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 15348
    metabolic process 9986
      cellular metabolic process 7792
        neurotransmitter metabolic process 20
          acetylcholine metabolic process + 6
          neurotransmitter biosynthetic process + 9
          neurotransmitter catabolic process + 7
          octopamine metabolic process + 1
          phenylethylamine metabolic process involved in synaptic transmission + 0
Path 2
Term Annotations click to browse term
  biological_process 15348
    biological regulation 10759
      regulation of biological quality 2848
        regulation of neurotransmitter levels 217
          neurotransmitter metabolic process 20
            acetylcholine metabolic process + 6
            neurotransmitter biosynthetic process + 9
            neurotransmitter catabolic process + 7
            octopamine metabolic process + 1
            phenylethylamine metabolic process involved in synaptic transmission + 0
paths to the root