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ONTOLOGY REPORT - ANNOTATIONS


Term:T cell activation
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Accession:GO:0042110 term browser browse the term
Definition:The change in morphology and behavior of a mature or immature T cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific.
Synonyms:exact_synonym: T lymphocyte activation


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T cell activation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ada adenosine deaminase acts_upstream_of
involved_in
ISO
IEA
(MGI:1860411|PMID:10845921), (MGI:3640996|PMID:11435465) MGI
TreeGrafter
PMID:10845921 PMID:11435465 GO_REF:0000118 MGI:1860411 MGI:3640996 NCBI chrNW_004624790:9,809,550...9,829,199
Ensembl chrNW_004624790:9,809,492...9,829,883
JBrowse link
G Azi2 5-azacytidine induced 2 acts_upstream_of_or_within ISO (MGI:5543352|PMID:23610142) MGI PMID:23610142 MGI:5543352 NCBI chrNW_004624788:6,183,405...6,209,941 JBrowse link
G Card11 caspase recruitment domain family member 11 acts_upstream_of_or_within ISO (MGI:2664641|PMID:12818158)
(MGI:3039643|PMID:12867038)
MGI PMID:12818158 PMID:12867038 MGI:2664641 MGI:3039643 NCBI chrNW_004624740:29,974,707...30,085,498
Ensembl chrNW_004624740:29,974,689...30,085,981
JBrowse link
G Cblb Cbl proto-oncogene B acts_upstream_of_or_within ISO (MGI:2388463|PMID:11070165) MGI PMID:11070165 MGI:2388463 NCBI chrNW_004624731:43,803,743...44,018,682
Ensembl chrNW_004624731:43,803,768...44,015,870
JBrowse link
G Cd276 CD276 molecule involved_in ISO (PMID:18650384) UniProt PMID:18650384 NCBI chrNW_004624781:691,348...703,202 JBrowse link
G Cd28 CD28 molecule involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624765:12,650,092...12,667,168 JBrowse link
G Cd3e CD3e molecule acts_upstream_of ISO (MGI:3822044|PMID:12874832) MGI PMID:12874832 MGI:3822044 NCBI chrNW_004624784:13,714,667...13,726,881
Ensembl chrNW_004624784:13,712,920...13,726,950
JBrowse link
G Cd4 CD4 molecule acts_upstream_of
involved_in
ISO
IEA
(MGI:2429474|PMID:12421911) MGI
TreeGrafter
PMID:12421911 GO_REF:0000118 MGI:2429474 NCBI chrNW_004624860:3,470,886...3,492,247
Ensembl chrNW_004624860:3,470,631...3,492,846
JBrowse link
G Cd44 CD44 molecule (IN blood group) involved_in ISO (PMID:7528188) UniProt PMID:7528188 NCBI chrNW_004624767:11,938,452...12,024,970
Ensembl chrNW_004624767:11,938,028...12,025,069
JBrowse link
G Cd48 CD48 molecule acts_upstream_of_or_within ISO (MGI:51393|PMID:1383383) MGI PMID:1383383 MGI:51393 NCBI chrNW_004624794:564,425...605,080
Ensembl chrNW_004624794:564,375...605,315
JBrowse link
G Cd80 CD80 molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624731:28,630,540...28,655,297
Ensembl chrNW_004624731:28,630,446...28,651,994
JBrowse link
G Cd84 CD84 molecule involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624794:709,169...742,591
Ensembl chrNW_004624794:709,235...740,846
JBrowse link
G Cd86 CD86 molecule involved_in ISO (PMID:7527824) UniProt PMID:7527824 NCBI chrNW_004624912:350,201...432,410
Ensembl chrNW_004624912:350,157...426,712
JBrowse link
G Cd8a CD8 subunit alpha involved_in ISO (PMID:17145893) ComplexPortal PMID:17145893 NCBI chrNW_004624749:16,564,944...16,569,890 JBrowse link
G Cd8b CD8 subunit beta involved_in ISO (PMID:17145893) ComplexPortal PMID:17145893 NCBI chrNW_004624749:16,513,360...16,525,494 JBrowse link
G Chrna7 cholinergic receptor nicotinic alpha 7 subunit involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3663537|PMID:16253349) Ensembl
MGI
PMID:16253349 GO_REF:0000107 MGI:3663537 NCBI chrNW_004624768:908,907...1,024,953
Ensembl chrNW_004624768:909,099...1,024,902
JBrowse link
G Coro1a coronin 1A acts_upstream_of ISO (MGI:3773559|PMID:18199416) MGI PMID:18199416 MGI:3773559 NCBI chrNW_004624782:13,106,416...13,111,394
Ensembl chrNW_004624782:13,105,153...13,111,357
JBrowse link
G Cul4a cullin 4A involved_in ISO (PMID:34065512) UniProt PMID:34065512 NCBI chrNW_004624793:686,720...722,516
Ensembl chrNW_004624793:688,135...722,490
JBrowse link
G Dcaf12 DDB1 and CUL4 associated factor 12 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624736:38,488,120...38,528,500
Ensembl chrNW_004624736:38,489,466...38,527,706
JBrowse link
G Ddost dolichyl-diphosphooligosaccharide--protein glycosyltransferase non-catalytic subunit involved_in ISO (PMID:9642163) UniProt PMID:9642163 NCBI chrNW_004624764:5,671,724...5,681,729
Ensembl chrNW_004624764:5,671,724...5,681,835
JBrowse link
G Dlg1 discs large MAGUK scaffold protein 1 acts_upstream_of_or_within ISO (MGI:3528803|PMID:15699074), (MGI:3697750|PMID:17187070) MGI PMID:15699074 PMID:17187070 MGI:3528803 MGI:3697750 NCBI chrNW_004624730:62,001,547...62,223,098
Ensembl chrNW_004624730:62,002,280...62,223,319
JBrowse link
G Dock2 dedicator of cytokinesis 2 acts_upstream_of_or_within ISO (MGI:2668308|PMID:12871644) MGI PMID:12871644 MGI:2668308 NCBI chrNW_004624733:19,882,234...20,315,211
Ensembl chrNW_004624733:19,883,027...20,315,128
JBrowse link
G Dpp4 dipeptidyl peptidase 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624732:3,460,529...3,535,252
Ensembl chrNW_004624732:3,460,118...3,535,249
JBrowse link
G Foxp3 forkhead box P3 acts_upstream_of_or_within
involved_in
ISO (MGI:1331533|PMID:10072494)
(PMID:15466453)
MGI
UniProt
PMID:10072494 PMID:15466453 MGI:1331533 NCBI chrNW_004624893:995,145...1,008,492
Ensembl chrNW_004624893:995,182...1,008,679
JBrowse link
G Gja1 gap junction protein alpha 1 involved_in ISO (MGI:5301502|PMID:21844382) UniProt PMID:21844382 MGI:5301502 NCBI chrNW_004624798:9,358,996...9,364,413
Ensembl chrNW_004624798:9,359,004...9,364,313
JBrowse link
G Hsh2d hematopoietic SH2 domain containing acts_upstream_of_or_within ISO (MGI:2676449|PMID:12960172) MGI PMID:12960172 MGI:2676449 NCBI chrNW_004624908:1,108,552...1,116,615 JBrowse link
G Hspd1 heat shock protein family D (Hsp60) member 1 acts_upstream_of_or_within ISO (PMID:15371451), (PMID:17164250), (PMID:18256040)
(MGI:3512854|PMID:15371451), (MGI:3708392|PMID:17164250), (MGI:3774883|PMID:18256040)
(MGI:3708392|PMID:17164250)
MGI PMID:15371451 PMID:17164250 PMID:18256040 MGI:3512854 MGI:3708392 MGI:3774883 NCBI chrNW_004624889:2,736,727...2,746,333 JBrowse link
G Ifnar1 interferon alpha and beta receptor subunit 1 acts_upstream_of_or_within ISO (MGI:3708392|PMID:17164250) MGI PMID:17164250 MGI:3708392 NCBI chrNW_004624745:21,545,846...21,569,719
Ensembl chrNW_004624745:21,546,007...21,572,776
JBrowse link
G Il4 interleukin 4 involved_in ISO (PMID:18337562) BHF-UCL PMID:18337562 NCBI chrNW_004624733:39,412,800...39,420,079 JBrowse link
G Il6 interleukin 6 acts_upstream_of_or_within ISO (MGI:3817792|PMID:18792410) MGI PMID:18792410 MGI:3817792 NCBI chrNW_004624739:7,957,709...7,963,414
Ensembl chrNW_004624739:7,957,674...7,962,318
JBrowse link
G Lag3 lymphocyte activating 3 acts_upstream_of ISO (MGI:2429474|PMID:12421911) MGI PMID:12421911 MGI:2429474 NCBI chrNW_004624860:3,454,587...3,461,649
Ensembl chrNW_004624860:3,456,347...3,461,592
JBrowse link
G Mfap3 microfibril associated protein 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624733:35,100,215...35,119,928
Ensembl chrNW_004624733:35,102,700...35,107,980
JBrowse link
G Nck1 NCK adaptor protein 1 involved_in ISO (PMID:12110186) UniProt PMID:12110186 NCBI chrNW_004624730:13,271,575...13,366,930
Ensembl chrNW_004624730:13,226,315...13,366,661
JBrowse link
G Nedd4 NEDD4 E3 ubiquitin protein ligase acts_upstream_of_or_within ISO (MGI:3828188|PMID:18931680) MGI PMID:18931680 MGI:3828188 NCBI chrNW_004624731:5,855,678...5,954,119
Ensembl chrNW_004624731:5,862,626...5,951,421
JBrowse link
G Nlrc3 NLR family CARD domain containing 3 involved_in ISO (PMID:15705585) UniProt PMID:15705585 NCBI chrNW_004624824:1,356,587...1,375,403
Ensembl chrNW_004624824:1,357,326...1,375,688
JBrowse link
G Peli1 pellino E3 ubiquitin protein ligase 1 acts_upstream_of ISO (MGI:5291872|PMID:21874024) MGI PMID:21874024 MGI:5291872 NCBI chrNW_004624762:9,328,275...9,382,996
Ensembl chrNW_004624762:9,328,109...9,386,067
JBrowse link
G Prkcq protein kinase C theta acts_upstream_of ISO (MGI:3039643|PMID:12867038) MGI PMID:12867038 MGI:3039643 NCBI chrNW_004624775:1,419,596...1,543,805
Ensembl chrNW_004624775:1,419,509...1,502,064
JBrowse link
G Rab29 RAB29, member RAS oncogene family involved_in ISO (PMID:26021297) ParkinsonsUK-UCL PMID:26021297 NCBI chrNW_004624807:5,478,570...5,483,473
Ensembl chrNW_004624807:5,478,707...5,483,475
JBrowse link
G Rasgrp1 RAS guanyl releasing protein 1 involved_in ISO (PMID:27776107), (PMID:29155103) UniProt PMID:27776107 PMID:29155103 NCBI chrNW_004624804:5,691,011...5,763,314
Ensembl chrNW_004624804:5,690,400...5,763,288
JBrowse link
G Rbx1 ring-box 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624752:7,547,702...7,560,605
Ensembl chrNW_004624752:7,546,959...7,560,668
JBrowse link
G Satb1 SATB homeobox 1 acts_upstream_of_or_within ISO (MGI:1354431|PMID:10716941) MGI PMID:10716941 MGI:1354431 NCBI chrNW_004624821:3,723,609...3,820,921
Ensembl chrNW_004624821:3,726,355...3,800,497
JBrowse link
G Sla2 Src like adaptor 2 involved_in
acts_upstream_of
acts_upstream_of_or_within
IEA
ISO
(PMID:11891219)
(MGI:2180273|PMID:12024036), (MGI:2180432|PMID:11891219)
Ensembl
UniProt
MGI
PMID:11891219 PMID:12024036 GO_REF:0000107 MGI:2180273 MGI:2180432 NCBI chrNW_004624842:2,853,183...2,882,269
Ensembl chrNW_004624842:2,853,144...2,881,116
JBrowse link
G Smad3 SMAD family member 3 involved_in ISO (MGI:1332876|PMID:10064594) UniProt PMID:10064594 MGI:1332876 NCBI chrNW_004624781:5,795,652...5,890,047
Ensembl chrNW_004624781:5,795,652...5,890,371
JBrowse link
G Tgfb1 transforming growth factor beta 1 involved_in
acts_upstream_of
acts_upstream_of_or_within
IEA
ISO
(MGI:3641518|PMID:12646629)
(MGI:3718815|PMID:17481928)
(MGI:3823129|PMID:18997793)
Ensembl
MGI
PMID:12646629 PMID:17481928 PMID:18997793 GO_REF:0000107 MGI:3641518 MGI:3718815 MGI:3823129 NCBI chrNW_004624907:162,567...175,696
Ensembl chrNW_004624907:161,569...176,605
JBrowse link
G Tnfaip8l2 TNF alpha induced protein 8 like 2 acts_upstream_of ISO (MGI:5295125|PMID:21963221) MGI PMID:21963221 MGI:5295125 NCBI chrNW_004624772:18,695,670...18,698,304
Ensembl chrNW_004624772:18,695,083...18,697,688
JBrowse link
G Traf3ip2 TRAF3 interacting protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624933:507,879...558,357
Ensembl chrNW_004624933:506,254...554,015
JBrowse link
G Treml2 triggering receptor expressed on myeloid cells like 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624754:17,613,812...17,623,436 JBrowse link
G Vav1 vav guanine nucleotide exchange factor 1 acts_upstream_of_or_within ISO (MGI:2388463|PMID:11070165) MGI PMID:11070165 MGI:2388463 NCBI chrNW_004624828:3,838,464...3,896,698
Ensembl chrNW_004624828:3,838,706...3,897,080
JBrowse link
G Was WASP actin nucleation promoting factor acts_upstream_of_or_within ISO (MGI:2388463|PMID:11070165) MGI PMID:11070165 MGI:2388463 NCBI chrNW_004624893:453,793...493,696
Ensembl chrNW_004624893:487,396...493,482
JBrowse link
activated CD4-positive, alpha-beta T cell proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tnfsf18 TNF superfamily member 18 NOT|involved_in ISO (MGI:5551556|PMID:24107315) UniProt PMID:24107315 MGI:5551556 NCBI chrNW_004624771:8,711,093...8,722,518
Ensembl chrNW_004624771:8,711,017...8,722,539
JBrowse link
activated T cell proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abl1 ABL proto-oncogene 1, non-receptor tyrosine kinase acts_upstream_of_or_within ISO (MGI:4399009|PMID:18025176) MGI PMID:18025176 MGI:4399009 NCBI chrNW_004624760:4,878,811...5,032,719
Ensembl chrNW_004624760:4,878,556...5,031,491
JBrowse link
G Cadm1 cell adhesion molecule 1 NOT|involved_in ISO (PMID:15811952) UniProt PMID:15811952 NCBI chrNW_004624784:10,595,876...10,933,024
Ensembl chrNW_004624784:10,591,824...10,932,981
JBrowse link
G Crtam cytotoxic and regulatory T cell molecule NOT|involved_in ISO (PMID:15811952) HGNC-UCL PMID:15811952 NCBI chrNW_004624880:2,229,201...2,240,068 JBrowse link
G Ephb6 EPH receptor B6 acts_upstream_of_or_within ISO (MGI:3513714|PMID:15599401) MGI PMID:15599401 MGI:3513714 NCBI chrNW_004624800:12,069,977...12,076,992
Ensembl chrNW_004624800:12,069,908...12,074,669
JBrowse link
G Fyn FYN proto-oncogene, Src family tyrosine kinase acts_upstream_of_or_within ISO (MGI:2148425|PMID:1516132) MGI PMID:1516132 MGI:2148425 NCBI chrNW_004624933:248,298...456,933
Ensembl chrNW_004624933:389,627...456,520
JBrowse link
G Gpam glycerol-3-phosphate acyltransferase, mitochondrial acts_upstream_of
involved_in
ISO
IEA
(MGI:3826295|PMID:18971390) MGI
Ensembl
PMID:18971390 GO_REF:0000107 MGI:3826295 NCBI chrNW_004624737:34,198,773...34,268,815
Ensembl chrNW_004624737:34,198,518...34,265,192
JBrowse link
G Il2 interleukin 2 acts_upstream_of ISO (MGI:87443|PMID:1830926)
(MGI:1889048|PMID:7584142), (MGI:3577956|PMID:10485657)
MGI PMID:1830926 PMID:7584142 PMID:10485657 MGI:1889048 MGI:3577956 MGI:87443 NCBI chrNW_004624777:2,885,537...2,890,453
Ensembl chrNW_004624777:2,885,535...2,890,453
JBrowse link
G Il2ra interleukin 2 receptor subunit alpha acts_upstream_of ISO (MGI:1889048|PMID:7584142) MGI PMID:7584142 MGI:1889048 NCBI chrNW_004624775:927,337...991,062
Ensembl chrNW_004624775:924,648...942,354
JBrowse link
G Il4 interleukin 4 acts_upstream_of ISO (MGI:3577956|PMID:10485657), (MGI:3655409|PMID:9841920) MGI PMID:9841920 PMID:10485657 MGI:3577956 MGI:3655409 NCBI chrNW_004624733:39,412,800...39,420,079 JBrowse link
G Itgal integrin subunit alpha L acts_upstream_of_or_within ISO (MGI:3045560|PMID:15210787) MGI PMID:15210787 MGI:3045560 NCBI chrNW_004624782:13,635,217...13,671,401
Ensembl chrNW_004624782:13,640,996...13,669,541
JBrowse link
G Itgam integrin subunit alpha M acts_upstream_of_or_within ISO (MGI:3045560|PMID:15210787) MGI PMID:15210787 MGI:3045560 NCBI chrNW_004624782:14,316,505...14,367,841
Ensembl chrNW_004624782:14,318,499...14,367,922
JBrowse link
G Itgax integrin subunit alpha X NOT|acts_upstream_of_or_within ISO (MGI:3045560|PMID:15210787) MGI PMID:15210787 MGI:3045560 NCBI chrNW_004624782:14,380,234...14,397,552
Ensembl chrNW_004624782:14,380,399...14,395,916
JBrowse link
G Itgb2 integrin subunit beta 2 acts_upstream_of_or_within ISO (MGI:3045560|PMID:15210787) MGI PMID:15210787 MGI:3045560 NCBI chrNW_004624745:30,452,576...30,479,036
Ensembl chrNW_004624745:30,452,576...30,470,611
JBrowse link
G Satb1 SATB homeobox 1 acts_upstream_of_or_within ISO (MGI:3577552|PMID:15814699) MGI PMID:15814699 MGI:3577552 NCBI chrNW_004624821:3,723,609...3,820,921
Ensembl chrNW_004624821:3,726,355...3,800,497
JBrowse link
alpha-beta T cell activation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dock2 dedicator of cytokinesis 2 acts_upstream_of_or_within ISO (MGI:2668308|PMID:12871644) MGI PMID:12871644 MGI:2668308 NCBI chrNW_004624733:19,882,234...20,315,211
Ensembl chrNW_004624733:19,883,027...20,315,128
JBrowse link
G Ins insulin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624767:14,999,088...15,000,035
Ensembl chrNW_004624767:14,999,088...15,000,035
JBrowse link
alpha-beta T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abl1 ABL proto-oncogene 1, non-receptor tyrosine kinase acts_upstream_of_or_within ISO (MGI:4399009|PMID:18025176) MGI PMID:18025176 MGI:4399009 NCBI chrNW_004624760:4,878,811...5,032,719
Ensembl chrNW_004624760:4,878,556...5,031,491
JBrowse link
G Abl2 ABL proto-oncogene 2, non-receptor tyrosine kinase acts_upstream_of_or_within ISO (MGI:4399009|PMID:18025176) MGI PMID:18025176 MGI:4399009 NCBI chrNW_004624771:3,160,528...3,280,860
Ensembl chrNW_004624771:3,160,224...3,278,787
JBrowse link
G Ada adenosine deaminase acts_upstream_of ISO (MGI:3690682|PMID:11067867), (MGI:3774231|PMID:16670300)
(MGI:3620422|PMID:12163459), (MGI:3690682|PMID:11067867), (MGI:3774231|PMID:16670300)
MGI PMID:11067867 PMID:12163459 PMID:16670300 MGI:3620422 MGI:3690682 MGI:3774231 NCBI chrNW_004624790:9,809,550...9,829,199
Ensembl chrNW_004624790:9,809,492...9,829,883
JBrowse link
G Anxa1 annexin A1 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624811:765,338...782,203
Ensembl chrNW_004624811:764,940...782,198
JBrowse link
G Bcl11b BCL11 transcription factor B acts_upstream_of_or_within ISO (MGI:2662810|PMID:12717433) MGI PMID:12717433 MGI:2662810 NCBI chrNW_004624734:4,560,362...4,649,219
Ensembl chrNW_004624734:4,560,699...4,647,858
JBrowse link
G Blm BLM RecQ like helicase acts_upstream_of_or_within ISO (MGI:3700903|PMID:17210642) MGI PMID:17210642 MGI:3700903 NCBI chrNW_004624768:17,422,267...17,522,894
Ensembl chrNW_004624768:17,421,291...17,522,799
JBrowse link
G Braf B-Raf proto-oncogene, serine/threonine kinase acts_upstream_of_or_within ISO (MGI:5473721|PMID:23334952) MGI PMID:23334952 MGI:5473721 NCBI chrNW_004624765:20,766,368...20,951,560
Ensembl chrNW_004624765:20,773,885...20,951,736
JBrowse link
G Gli3 GLI family zinc finger 3 acts_upstream_of_or_within ISO (MGI:3695957|PMID:15855276) MGI PMID:15855276 MGI:3695957 NCBI chrNW_004624740:18,961,395...19,238,760
Ensembl chrNW_004624740:18,975,596...19,235,900
JBrowse link
G Lef1 lymphoid enhancer binding factor 1 acts_upstream_of_or_within ISO (MGI:3640275|PMID:9462507) MGI PMID:9462507 MGI:3640275 NCBI chrNW_004624830:1,320,034...1,422,774
Ensembl chrNW_004624830:1,321,387...1,424,389
JBrowse link
G LOC101716577 tyrosine-protein kinase ZAP-70 acts_upstream_of ISO (MGI:893249|PMID:9208839)
(MGI:1096306|PMID:9275205)
(MGI:75253|PMID:7630421)
MGI PMID:7630421 PMID:9208839 PMID:9275205 MGI:1096306 MGI:75253 MGI:893249 NCBI chrNW_004624749:2,893,601...2,901,256
Ensembl chrNW_004624749:2,893,601...2,901,035
JBrowse link
G Prr7 proline rich 7, synaptic involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624733:12,632,297...12,633,521
Ensembl chrNW_004624733:12,632,309...12,633,729
JBrowse link
G Rorc RAR related orphan receptor C acts_upstream_of_or_within ISO (MGI:3047471|PMID:15247480) MGI PMID:15247480 MGI:3047471 NCBI chrNW_004624772:19,478,403...19,501,184
Ensembl chrNW_004624772:19,477,093...19,501,169
JBrowse link
G Rpl22 ribosomal protein L22 acts_upstream_of_or_within ISO (MGI:3718837|PMID:17555992) MGI PMID:17555992 MGI:3718837 NCBI chrNW_004624818:5,189,154...5,198,577
Ensembl chrNW_004624818:5,188,925...5,199,059
JBrowse link
G Shh sonic hedgehog signaling molecule acts_upstream_of ISO (MGI:1888832|PMID:10981962) MGI PMID:10981962 MGI:1888832 NCBI chrNW_004624800:2,202,986...2,215,309
Ensembl chrNW_004624800:2,203,393...2,212,068
JBrowse link
G Tcf7 transcription factor 7 acts_upstream_of_or_within ISO (MGI:3640275|PMID:9462507) MGI PMID:9462507 MGI:3640275 NCBI chrNW_004624733:38,076,800...38,104,265
Ensembl chrNW_004624733:38,076,410...38,104,173
JBrowse link
alpha-beta T cell lineage commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rhoa ras homolog family member A involved_in ISO (MGI:5640904|PMID:25398325) CACAO PMID:25398325 MGI:5640904 NCBI chrNW_004624730:3,316,122...3,361,820 JBrowse link
alpha-beta T cell proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Blm BLM RecQ like helicase acts_upstream_of ISO (MGI:3700903|PMID:17210642) MGI PMID:17210642 MGI:3700903 NCBI chrNW_004624768:17,422,267...17,522,894
Ensembl chrNW_004624768:17,421,291...17,522,799
JBrowse link
G Clec4g C-type lectin domain family 4 member G acts_upstream_of
involved_in
ISO
IEA
(MGI:5475030|PMID:23487419) MGI
Ensembl
PMID:23487419 GO_REF:0000107 MGI:5475030 NCBI chrNW_004624828:775,114...778,526
Ensembl chrNW_004624828:773,569...778,615
JBrowse link
G Dock2 dedicator of cytokinesis 2 acts_upstream_of_or_within ISO (MGI:2668308|PMID:12871644) MGI PMID:12871644 MGI:2668308 NCBI chrNW_004624733:19,882,234...20,315,211
Ensembl chrNW_004624733:19,883,027...20,315,128
JBrowse link
G Foxp3 forkhead box P3 acts_upstream_of ISO (MGI:3692513|PMID:16945588) MGI PMID:16945588 MGI:3692513 NCBI chrNW_004624893:995,145...1,008,492
Ensembl chrNW_004624893:995,182...1,008,679
JBrowse link
G Ptprc protein tyrosine phosphatase receptor type C acts_upstream_of ISO (MGI:73253|PMID:7751624) MGI PMID:7751624 MGI:73253 NCBI chrNW_004624798:1,700,732...1,814,603
Ensembl chrNW_004624798:1,699,541...1,814,656
JBrowse link
beta selection term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC101716577 tyrosine-protein kinase ZAP-70 acts_upstream_of_or_within ISO (MGI:1096306|PMID:9275205) MGI PMID:9275205 MGI:1096306 NCBI chrNW_004624749:2,893,601...2,901,256
Ensembl chrNW_004624749:2,893,601...2,901,035
JBrowse link
G Rhoa ras homolog family member A involved_in ISO (MGI:5640904|PMID:25398325) CACAO PMID:25398325 MGI:5640904 NCBI chrNW_004624730:3,316,122...3,361,820 JBrowse link
G Syk spleen associated tyrosine kinase acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1096306|PMID:9275205) MGI
Ensembl
PMID:9275205 GO_REF:0000107 MGI:1096306 NCBI chrNW_004624868:1,654,079...1,738,648
Ensembl chrNW_004624868:1,653,997...1,701,391
JBrowse link
CD4-positive or CD8-positive, alpha-beta T cell lineage commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Braf B-Raf proto-oncogene, serine/threonine kinase acts_upstream_of_or_within ISO (MGI:3773982|PMID:18228248) MGI PMID:18228248 MGI:3773982 NCBI chrNW_004624765:20,766,368...20,951,560
Ensembl chrNW_004624765:20,773,885...20,951,736
JBrowse link
G Cyld CYLD lysine 63 deubiquitinase acts_upstream_of_or_within ISO (MGI:3656194|PMID:16501569) MGI PMID:16501569 MGI:3656194 NCBI chrNW_004624757:5,895,912...5,953,485 JBrowse link
G Shh sonic hedgehog signaling molecule involved_in ISO (MGI:3834308|PMID:17227833)
(PMID:17227833)
BHF-UCL PMID:17227833 MGI:3834308 NCBI chrNW_004624800:2,202,986...2,215,309
Ensembl chrNW_004624800:2,203,393...2,212,068
JBrowse link
CD4-positive, alpha-beta T cell activation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdh26 cadherin 26 involved_in ISO (PMID:28051089) UniProt PMID:28051089 NCBI chrNW_004624741:26,243,545...26,255,170 JBrowse link
G Nkg7 natural killer cell granule protein 7 involved_in ISO (MGI:6506882|PMID:32839608) UniProt PMID:32839608 MGI:6506882 NCBI chrNW_004624832:3,501,924...3,502,750
Ensembl chrNW_004624832:3,501,973...3,504,773
JBrowse link
G Rsad2 radical S-adenosyl methionine domain containing 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624846:3,395,536...3,408,616
Ensembl chrNW_004624846:3,395,406...3,408,626
JBrowse link
G Stoml2 stomatin like 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624915:294,781...298,312
Ensembl chrNW_004624915:294,777...298,278
JBrowse link
CD4-positive, alpha-beta T cell costimulation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd81 CD81 molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624767:15,192,446...15,210,923
Ensembl chrNW_004624767:15,192,452...15,210,922
JBrowse link
G Tnfsf4 TNF superfamily member 4 involved_in ISO (MGI:4819294|PMID:20639485) BHF-UCL PMID:20639485 MGI:4819294 NCBI chrNW_004624771:8,580,489...8,599,735 JBrowse link
CD4-positive, alpha-beta T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Armc5 armadillo repeat containing 5 acts_upstream_of_or_within ISO (MGI:5913441|PMID:28169274) MGI PMID:28169274 MGI:5913441 NCBI chrNW_004624782:14,461,488...14,468,407
Ensembl chrNW_004624782:14,462,114...14,468,404
JBrowse link
G Braf B-Raf proto-oncogene, serine/threonine kinase acts_upstream_of_or_within ISO (MGI:5473721|PMID:23334952) MGI PMID:23334952 MGI:5473721 NCBI chrNW_004624765:20,766,368...20,951,560
Ensembl chrNW_004624765:20,773,885...20,951,736
JBrowse link
G Cd83 CD83 molecule acts_upstream_of ISO (MGI:3054335|PMID:15322158) MGI PMID:15322158 MGI:3054335 NCBI chrNW_004624756:12,212,921...12,229,974
Ensembl chrNW_004624756:12,210,892...12,229,749
JBrowse link
G Foxp3 forkhead box P3 acts_upstream_of ISO (MGI:3697020|PMID:17028180) MGI PMID:17028180 MGI:3697020 NCBI chrNW_004624893:995,145...1,008,492
Ensembl chrNW_004624893:995,182...1,008,679
JBrowse link
G Gimap1 GTPase, IMAP family member 1 acts_upstream_of_or_within ISO (MGI:4455099|PMID:20194894) MGI PMID:20194894 MGI:4455099 NCBI chrNW_004624800:5,879,399...5,899,337 JBrowse link
G Nkx2-3 NK2 homeobox 3 acts_upstream_of_or_within ISO (MGI:1888604|PMID:10926756) MGI PMID:10926756 MGI:1888604 NCBI chrNW_004624737:11,253,490...11,256,974
Ensembl chrNW_004624737:11,253,483...11,256,232
JBrowse link
G Pax1 paired box 1 acts_upstream_of_or_within ISO (MGI:3590033|PMID:16093716) MGI PMID:16093716 MGI:3590033 NCBI chrNW_004624741:22,009,733...22,017,377
Ensembl chrNW_004624741:22,007,778...22,017,325
JBrowse link
G Rsad2 radical S-adenosyl methionine domain containing 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624846:3,395,536...3,408,616
Ensembl chrNW_004624846:3,395,406...3,408,626
JBrowse link
G Sash3 SAM and SH3 domain containing 3 acts_upstream_of
involved_in
ISO
IEA
(MGI:3607020|PMID:16227612) MGI
Ensembl
PMID:16227612 GO_REF:0000107 MGI:3607020 NCBI chrNW_004624797:9,001,846...9,017,441
Ensembl chrNW_004624797:9,001,795...9,018,027
JBrowse link
G Satb1 SATB homeobox 1 acts_upstream_of_or_within ISO (MGI:1354431|PMID:10716941) MGI PMID:10716941 MGI:1354431 NCBI chrNW_004624821:3,723,609...3,820,921
Ensembl chrNW_004624821:3,726,355...3,800,497
JBrowse link
CD4-positive, alpha-beta T cell lineage commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tox thymocyte selection associated high mobility group box involved_in ISO (MGI:3773459|PMID:18195075) UniProt PMID:18195075 MGI:3773459 NCBI chrNW_004624744:32,865,781...33,218,453
Ensembl chrNW_004624744:32,865,720...33,218,643
JBrowse link
CD4-positive, alpha-beta T cell proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Card11 caspase recruitment domain family member 11 acts_upstream_of ISO (MGI:3039643|PMID:12867038) MGI PMID:12867038 MGI:3039643 NCBI chrNW_004624740:29,974,707...30,085,498
Ensembl chrNW_004624740:29,974,689...30,085,981
JBrowse link
G Cblb Cbl proto-oncogene B acts_upstream_of ISO (MGI:3038342|PMID:14973438) MGI PMID:14973438 MGI:3038342 NCBI chrNW_004624731:43,803,743...44,018,682
Ensembl chrNW_004624731:43,803,768...44,015,870
JBrowse link
G Cd24 CD24 molecule acts_upstream_of ISO (MGI:65397|PMID:8125140)
(MGI:3510282|PMID:15314074)
MGI PMID:8125140 PMID:15314074 MGI:3510282 MGI:65397 NCBI chrNW_004624780:15,287,426...15,292,292
Ensembl chrNW_004624780:15,287,433...15,292,292
JBrowse link
G Cd28 CD28 molecule acts_upstream_of ISO (MGI:3038342|PMID:14973438), (MGI:3757614|PMID:9368605), (MGI:65397|PMID:8125140)
(MGI:3757614|PMID:9368605)
MGI PMID:8125140 PMID:9368605 PMID:14973438 MGI:3038342 MGI:3757614 MGI:65397 NCBI chrNW_004624765:12,650,092...12,667,168 JBrowse link
G Cd3e CD3e molecule acts_upstream_of ISO (MGI:2176424|PMID:11894097), (MGI:3038342|PMID:14973438), (MGI:65397|PMID:8125140) MGI PMID:8125140 PMID:11894097 PMID:14973438 MGI:2176424 MGI:3038342 MGI:65397 NCBI chrNW_004624784:13,714,667...13,726,881
Ensembl chrNW_004624784:13,712,920...13,726,950
JBrowse link
G Foxp3 forkhead box P3 acts_upstream_of ISO (MGI:3697020|PMID:17028180) MGI PMID:17028180 MGI:3697020 NCBI chrNW_004624893:995,145...1,008,492
Ensembl chrNW_004624893:995,182...1,008,679
JBrowse link
G Itch itchy E3 ubiquitin protein ligase acts_upstream_of ISO (MGI:3038342|PMID:14973438) MGI PMID:14973438 MGI:3038342 NCBI chrNW_004624842:4,840,848...4,977,785
Ensembl chrNW_004624842:4,842,419...4,935,699
JBrowse link
G Ndfip1 Nedd4 family interacting protein 1 acts_upstream_of ISO (MGI:3694584|PMID:17137798) MGI PMID:17137798 MGI:3694584 NCBI chrNW_004624774:1,245,587...1,353,253
Ensembl chrNW_004624774:1,303,773...1,353,253
JBrowse link
G Prkcq protein kinase C theta acts_upstream_of ISO (MGI:3039643|PMID:12867038) MGI PMID:12867038 MGI:3039643 NCBI chrNW_004624775:1,419,596...1,543,805
Ensembl chrNW_004624775:1,419,509...1,502,064
JBrowse link
G Ripk2 receptor interacting serine/threonine kinase 2 acts_upstream_of ISO (MGI:2176424|PMID:11894097)
(MGI:2176422|PMID:11894098)
MGI PMID:11894097 PMID:11894098 MGI:2176422 MGI:2176424 NCBI chrNW_004624744:2,194,339...2,227,498
Ensembl chrNW_004624744:2,201,319...2,226,890
JBrowse link
G Tnfrsf14 TNF receptor superfamily member 14 acts_upstream_of ISO (MGI:3521631|PMID:15568026) MGI PMID:15568026 MGI:3521631 NCBI chrNW_004624818:7,491,473...7,505,185 JBrowse link
CD4-positive, CD25-positive, alpha-beta regulatory T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxp3 forkhead box P3 acts_upstream_of
involved_in
ISO (MGI:3700459|PMID:16301745), (MGI:3799419|PMID:18573908)
(PMID:22079196)
(MGI:3695768|PMID:16275384)
MGI
CACAO
PMID:16275384 PMID:16301745 PMID:18573908 PMID:22079196 MGI:3695768 MGI:3700459 MGI:3799419 NCBI chrNW_004624893:995,145...1,008,492
Ensembl chrNW_004624893:995,182...1,008,679
JBrowse link
G Fut7 fucosyltransferase 7 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3799419|PMID:18573908) MGI
Ensembl
PMID:18573908 GO_REF:0000107 MGI:3799419 NCBI chrNW_004624760:876,048...877,984
Ensembl chrNW_004624760:876,059...877,574
JBrowse link
G Il2rg interleukin 2 receptor subunit gamma acts_upstream_of ISO (MGI:3662823|PMID:16227984) MGI PMID:16227984 MGI:3662823 NCBI chrNW_004624903:1,402,586...1,406,554
Ensembl chrNW_004624903:1,402,481...1,406,600
JBrowse link
G Ncor1 nuclear receptor corepressor 1 acts_upstream_of_or_within ISO (MGI:1926554|PMID:11030619) MGI PMID:11030619 MGI:1926554 NCBI chrNW_004624877:4,203,125...4,379,891
Ensembl chrNW_004624877:4,233,282...4,377,211
JBrowse link
G Pla2g2d phospholipase A2 group IID acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3851856|PMID:19564598) MGI
Ensembl
PMID:19564598 GO_REF:0000107 MGI:3851856 NCBI chrNW_004624764:5,224,071...5,229,603
Ensembl chrNW_004624764:5,224,018...5,229,609
JBrowse link
CD4-positive, CD25-positive, alpha-beta regulatory T cell lineage commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tox thymocyte selection associated high mobility group box involved_in ISO (MGI:3773459|PMID:18195075) UniProt PMID:18195075 MGI:3773459 NCBI chrNW_004624744:32,865,781...33,218,453
Ensembl chrNW_004624744:32,865,720...33,218,643
JBrowse link
CD8-positive, alpha-beta intraepithelial T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gpr18 G protein-coupled receptor 18 acts_upstream_of_or_within ISO (MGI:5629467|PMID:25348153) MGI PMID:25348153 MGI:5629467 NCBI chrNW_004624793:11,781,250...11,785,952 JBrowse link
CD8-positive, alpha-beta T cell activation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Wdfy4 WDFY family member 4 acts_upstream_of_or_within_positive_effect ISO (MGI:6257237|PMID:30409884) MGI PMID:30409884 MGI:6257237 NCBI chrNW_004624928:943,547...1,243,954
Ensembl chrNW_004624928:943,864...1,221,243
JBrowse link
CD8-positive, alpha-beta T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gimap1 GTPase, IMAP family member 1 acts_upstream_of_or_within ISO (MGI:4455099|PMID:20194894) MGI PMID:20194894 MGI:4455099 NCBI chrNW_004624800:5,879,399...5,899,337 JBrowse link
G Irf1 interferon regulatory factor 1 acts_upstream_of_or_within ISO (MGI:1934722|PMID:11359801) MGI PMID:11359801 MGI:1934722 NCBI chrNW_004624733:39,596,565...39,603,428
Ensembl chrNW_004624733:39,596,501...39,603,526
JBrowse link
G Otud5 OTU deubiquitinase 5 acts_upstream_of_or_within ISO (MGI:5621075|PMID:25470037) MGI PMID:25470037 MGI:5621075 NCBI chrNW_004624893:702,895...736,623 JBrowse link
G Pax1 paired box 1 acts_upstream_of_or_within ISO (MGI:3590033|PMID:16093716) MGI PMID:16093716 MGI:3590033 NCBI chrNW_004624741:22,009,733...22,017,377
Ensembl chrNW_004624741:22,007,778...22,017,325
JBrowse link
G Psmb11 proteasome subunit beta 11 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:6392185|PMID:31915251)
(MGI:3712579|PMID:17540904)
MGI
Ensembl
PMID:17540904 PMID:31915251 GO_REF:0000107 MGI:3712579 MGI:6392185 NCBI chrNW_004624820:9,498,320...9,499,222
Ensembl chrNW_004624820:9,498,320...9,499,222
JBrowse link
G Satb1 SATB homeobox 1 acts_upstream_of_or_within ISO (MGI:1354431|PMID:10716941), (MGI:3577552|PMID:15814699) MGI PMID:10716941 PMID:15814699 MGI:1354431 MGI:3577552 NCBI chrNW_004624821:3,723,609...3,820,921
Ensembl chrNW_004624821:3,726,355...3,800,497
JBrowse link
G Tnfsf8 TNF superfamily member 8 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3700858|PMID:16177108) MGI
TreeGrafter
Ensembl
PMID:16177108 GO_REF:0000107 GO_REF:0000118 MGI:3700858 NCBI chrNW_004624760:20,251,390...20,280,358
Ensembl chrNW_004624760:20,253,437...20,280,522
JBrowse link
CD8-positive, alpha-beta T cell differentiation involved in immune response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eomes eomesodermin involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624788:5,550,569...5,557,342
Ensembl chrNW_004624788:5,550,445...5,557,321
JBrowse link
G Ifng interferon gamma acts_upstream_of_or_within ISO (MGI:3829555|PMID:17277142) MGI PMID:17277142 MGI:3829555 NCBI chrNW_004624802:163,261...166,534
Ensembl chrNW_004624802:163,261...166,534
JBrowse link
CD8-positive, alpha-beta T cell lineage commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl2 BCL2 apoptosis regulator acts_upstream_of_or_within ISO (MGI:2156164|PMID:8170972) MGI PMID:8170972 MGI:2156164 NCBI chrNW_004624792:8,854,345...9,032,727
Ensembl chrNW_004624792:8,859,522...9,031,344
JBrowse link
G Tox thymocyte selection associated high mobility group box involved_in ISO (MGI:2159528|PMID:11850626), (MGI:3045816|PMID:15078895) UniProt PMID:11850626 PMID:15078895 MGI:2159528 MGI:3045816 NCBI chrNW_004624744:32,865,781...33,218,453
Ensembl chrNW_004624744:32,865,720...33,218,643
JBrowse link
CD8-positive, gamma-delta intraepithelial T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccr9 C-C motif chemokine receptor 9 acts_upstream_of_or_within ISO (MGI:5629467|PMID:25348153) MGI PMID:25348153 MGI:5629467 NCBI chrNW_004624730:74,989,725...74,991,400
Ensembl chrNW_004624730:74,990,318...74,996,239
JBrowse link
G Gpr18 G protein-coupled receptor 18 acts_upstream_of_or_within ISO (MGI:5629467|PMID:25348153) MGI PMID:25348153 MGI:5629467 NCBI chrNW_004624793:11,781,250...11,785,952 JBrowse link
cytotoxic T cell degranulation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rab27a RAB27A, member RAS oncogene family acts_upstream_of_or_within ISO (MGI:3653524|PMID:11266473) MGI PMID:11266473 MGI:3653524 NCBI chrNW_004624731:6,315,064...6,355,431
Ensembl chrNW_004624731:6,319,092...6,355,534
JBrowse link
G Stx11 syntaxin 11 acts_upstream_of_or_within ISO (MGI:5460953|PMID:23042080), (MGI:5471188|PMID:23190531) MGI PMID:23042080 PMID:23190531 MGI:5460953 MGI:5471188 NCBI chrNW_004624753:10,150,811...10,180,794
Ensembl chrNW_004624753:10,148,416...10,191,153
JBrowse link
cytotoxic T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd8a CD8 subunit alpha acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1933767|PMID:1673361) MGI
TreeGrafter
PMID:1673361 GO_REF:0000118 MGI:1933767 NCBI chrNW_004624749:16,564,944...16,569,890 JBrowse link
DN2 thymocyte differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccr6 C-C motif chemokine receptor 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624785:12,190,802...12,203,924 JBrowse link
G Lig4 DNA ligase 4 acts_upstream_of_or_within ISO (MGI:1312981|PMID:9823897), (MGI:1860400|PMID:10911993) MGI PMID:9823897 PMID:10911993 MGI:1312981 MGI:1860400 NCBI chrNW_004624793:3,699,394...3,706,591
Ensembl chrNW_004624793:3,699,506...3,706,073
JBrowse link
G Rag2 recombination activating 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1913213|PMID:9875844) MGI
Ensembl
PMID:9875844 GO_REF:0000107 MGI:1913213 NCBI chrNW_004624767:10,678,547...10,680,130
Ensembl chrNW_004624767:10,678,359...10,680,132
JBrowse link
G Xrcc4 X-ray repair cross complementing 4 acts_upstream_of_or_within ISO (MGI:1913213|PMID:9875844) MGI PMID:9875844 MGI:1913213 NCBI chrNW_004624743:3,299,329...3,549,182
Ensembl chrNW_004624743:3,317,351...3,552,161
JBrowse link
DN3 thymocyte differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccr6 C-C motif chemokine receptor 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624785:12,190,802...12,203,924 JBrowse link
DN4 thymocyte differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abl1 ABL proto-oncogene 1, non-receptor tyrosine kinase acts_upstream_of_or_within ISO (MGI:4399009|PMID:18025176) MGI PMID:18025176 MGI:4399009 NCBI chrNW_004624760:4,878,811...5,032,719
Ensembl chrNW_004624760:4,878,556...5,031,491
JBrowse link
G Abl2 ABL proto-oncogene 2, non-receptor tyrosine kinase acts_upstream_of_or_within ISO (MGI:4399009|PMID:18025176) MGI PMID:18025176 MGI:4399009 NCBI chrNW_004624771:3,160,528...3,280,860
Ensembl chrNW_004624771:3,160,224...3,278,787
JBrowse link
G Blm BLM RecQ like helicase acts_upstream_of_or_within ISO (MGI:3700903|PMID:17210642) MGI PMID:17210642 MGI:3700903 NCBI chrNW_004624768:17,422,267...17,522,894
Ensembl chrNW_004624768:17,421,291...17,522,799
JBrowse link
G Nfatc3 nuclear factor of activated T cells 3 involved_in ISO (MGI:3820023|PMID:17579027) UniProt PMID:17579027 MGI:3820023 NCBI chrNW_004624746:18,083,051...18,210,399
Ensembl chrNW_004624746:18,085,518...18,210,401
JBrowse link
establishment of T cell polarity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccl19 C-C motif chemokine ligand 19 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624736:39,088,741...39,090,745
Ensembl chrNW_004624736:39,088,921...39,090,394
JBrowse link
G Ccl21 C-C motif chemokine ligand 21 involved_in ISO (PMID:12729902) BHF-UCL PMID:12729902 NCBI chrNW_004624736:39,121,575...39,122,708
Ensembl chrNW_004624736:39,121,466...39,122,962
JBrowse link
G Crtam cytotoxic and regulatory T cell molecule involved_in ISO (MGI:3834299|PMID:18329370) UniProt PMID:18329370 MGI:3834299 NCBI chrNW_004624880:2,229,201...2,240,068 JBrowse link
G Dock2 dedicator of cytokinesis 2 acts_upstream_of_or_within ISO (MGI:2668308|PMID:12871644) MGI PMID:12871644 MGI:2668308 NCBI chrNW_004624733:19,882,234...20,315,211
Ensembl chrNW_004624733:19,883,027...20,315,128
JBrowse link
G LOC101714280 cytochrome P450 26B1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5547469|PMID:23991089) MGI
Ensembl
PMID:23991089 GO_REF:0000107 MGI:5547469 NCBI chrNW_004624762:1,455,828...1,474,201
Ensembl chrNW_004624762:1,456,440...1,472,381
JBrowse link
G Myh9 myosin heavy chain 9 acts_upstream_of_or_within ISO (MGI:3041667|PMID:15064761) MGI PMID:15064761 MGI:3041667 NCBI chrNW_004624752:11,327,881...11,414,037
Ensembl chrNW_004624752:11,327,877...11,413,669
JBrowse link
G Scrib scribble planar cell polarity protein involved_in ISO (MGI:3834299|PMID:18329370) UniProt PMID:18329370 MGI:3834299 NCBI chrNW_004624735:12,997,358...13,018,765
Ensembl chrNW_004624735:12,997,408...13,018,533
JBrowse link
G Traf3ip2 TRAF3 interacting protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624933:507,879...558,357
Ensembl chrNW_004624933:506,254...554,015
JBrowse link
extrathymic T cell selection term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Il15 interleukin 15 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1354083|PMID:10704459) MGI
Ensembl
PMID:10704459 GO_REF:0000107 MGI:1354083 NCBI chrNW_004624853:1,059,625...1,144,799
Ensembl chrNW_004624853:1,128,519...1,144,941
JBrowse link
gamma-delta T cell activation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cxadr CXADR Ig-like cell adhesion molecule involved_in ISO (MGI:4822257|PMID:20813954) UniProt PMID:20813954 MGI:4822257 NCBI chrNW_004624745:5,900,933...5,954,584
Ensembl chrNW_004624745:5,900,886...5,958,765
JBrowse link
G Itk IL2 inducible T cell kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624733:32,125,005...32,198,901
Ensembl chrNW_004624733:32,127,388...32,198,869
JBrowse link
G Jaml junction adhesion molecule like involved_in ISO (MGI:4822257|PMID:20813954) UniProt PMID:20813954 MGI:4822257 NCBI chrNW_004624784:13,601,368...13,625,881 JBrowse link
gamma-delta T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Jag2 jagged canonical Notch ligand 2 involved_in ISO (MGI:1342169|PMID:10383933) UniProt PMID:10383933 MGI:1342169 NCBI chrNW_004624734:308,371...327,496
Ensembl chrNW_004624734:308,375...327,604
JBrowse link
G Lck LCK proto-oncogene, Src family tyrosine kinase acts_upstream_of ISO (MGI:70338|PMID:7807014) MGI PMID:7807014 MGI:70338 NCBI chrNW_004624764:15,469,582...15,495,351
Ensembl chrNW_004624764:15,472,685...15,495,351
JBrowse link
G Ptprc protein tyrosine phosphatase receptor type C acts_upstream_of ISO (MGI:70338|PMID:7807014) MGI PMID:7807014 MGI:70338 NCBI chrNW_004624798:1,700,732...1,814,603
Ensembl chrNW_004624798:1,699,541...1,814,656
JBrowse link
G Sox13 SRY-box transcription factor 13 involved_in ISO (MGI:3695974|PMID:17218525), (MGI:6276541|PMID:30413363) UniProt PMID:17218525 PMID:30413363 MGI:3695974 MGI:6276541 NCBI chrNW_004624807:6,848,218...6,887,666
Ensembl chrNW_004624807:6,848,218...6,888,467
JBrowse link
G Syk spleen associated tyrosine kinase acts_upstream_of
involved_in
ISO
IEA
(MGI:77314|PMID:7477352)
(MGI:83585|PMID:8790395)
MGI
Ensembl
PMID:7477352 PMID:8790395 GO_REF:0000107 MGI:77314 MGI:83585 NCBI chrNW_004624868:1,654,079...1,738,648
Ensembl chrNW_004624868:1,653,997...1,701,391
JBrowse link
G Tcf7 transcription factor 7 involved_in ISO (MGI:6276541|PMID:30413363) UniProt PMID:30413363 MGI:6276541 NCBI chrNW_004624733:38,076,800...38,104,265
Ensembl chrNW_004624733:38,076,410...38,104,173
JBrowse link
gamma-delta T cell proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alkbh5 alkB homolog 5, RNA demethylase acts_upstream_of ISO (MGI:7437433|PMID:35939687) UniProt PMID:35939687 MGI:7437433 NCBI chrNW_004624849:3,257,460...3,280,870
Ensembl chrNW_004624849:3,257,459...3,280,245
JBrowse link
immature T cell proliferation in thymus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Blm BLM RecQ like helicase acts_upstream_of ISO (MGI:3700903|PMID:17210642) MGI PMID:17210642 MGI:3700903 NCBI chrNW_004624768:17,422,267...17,522,894
Ensembl chrNW_004624768:17,421,291...17,522,799
JBrowse link
G Clec4g C-type lectin domain family 4 member G acts_upstream_of
involved_in
ISO
IEA
(MGI:5475030|PMID:23487419) MGI
Ensembl
PMID:23487419 GO_REF:0000107 MGI:5475030 NCBI chrNW_004624828:775,114...778,526
Ensembl chrNW_004624828:773,569...778,615
JBrowse link
G Erbb2 erb-b2 receptor tyrosine kinase 2 acts_upstream_of ISO (MGI:3695084|PMID:16230479) MGI PMID:16230479 MGI:3695084 NCBI chrNW_004624795:3,373,313...3,391,509
Ensembl chrNW_004624795:3,373,000...3,391,602
JBrowse link
G Foxp3 forkhead box P3 acts_upstream_of ISO (MGI:3695084|PMID:16230479) MGI PMID:16230479 MGI:3695084 NCBI chrNW_004624893:995,145...1,008,492
Ensembl chrNW_004624893:995,182...1,008,679
JBrowse link
G Ifnar2 interferon alpha and beta receptor subunit 2 acts_upstream_of_or_within ISO (MGI:1929548|PMID:11154225) MGI PMID:11154225 MGI:1929548 NCBI chrNW_004624745:21,434,234...21,470,099
Ensembl chrNW_004624745:21,433,758...21,468,889
JBrowse link
G Ripk2 receptor interacting serine/threonine kinase 2 acts_upstream_of ISO (MGI:2176422|PMID:11894098) MGI PMID:11894098 MGI:2176422 NCBI chrNW_004624744:2,194,339...2,227,498
Ensembl chrNW_004624744:2,201,319...2,226,890
JBrowse link
G Wnt4 Wnt family member 4 acts_upstream_of_or_within ISO (MGI:3803049|PMID:18617424) MGI PMID:18617424 MGI:3803049 NCBI chrNW_004624764:6,913,027...6,934,650
Ensembl chrNW_004624764:6,921,811...6,933,392
JBrowse link
memory T cell activation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tcirg1 T cell immune regulator 1, ATPase H+ transporting V0 subunit a3 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3623073|PMID:16542376) MGI
Ensembl
PMID:16542376 GO_REF:0000107 MGI:3623073 NCBI chrNW_004624767:18,809,626...18,820,360
Ensembl chrNW_004624767:18,809,689...18,820,390
JBrowse link
G Tnfsf4 TNF superfamily member 4 involved_in ISO (MGI:3763508|PMID:12496423) BHF-UCL PMID:12496423 MGI:3763508 NCBI chrNW_004624771:8,580,489...8,599,735 JBrowse link
memory T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tsc1 TSC complex subunit 1 acts_upstream_of_or_within ISO (MGI:5608813|PMID:25271321) MGI PMID:25271321 MGI:5608813 NCBI chrNW_004624760:3,479,028...3,536,612
Ensembl chrNW_004624760:3,498,692...3,532,011
JBrowse link
memory T cell proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dock8 dedicator of cytokinesis 8 acts_upstream_of_or_within ISO (PMID:22006977) MGI PMID:22006977 NCBI chrNW_004624736:4,959,482...5,195,182
Ensembl chrNW_004624736:4,959,634...5,193,928
JBrowse link
negative regulation of activated T cell proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arg1 arginase 1 involved_in ISO (MGI:5908339|PMID:19360123) UniProt PMID:19360123 MGI:5908339 NCBI chrNW_004624753:5,737,720...5,749,313
Ensembl chrNW_004624753:5,737,237...5,752,966
JBrowse link
G Btn1a1 butyrophilin subfamily 1 member A1 involved_in ISO (MGI:4453380|PMID:20208008) UniProt PMID:20208008 MGI:4453380 NCBI chrNW_004624756:356,124...362,425
Ensembl chrNW_004624756:357,047...362,415
JBrowse link
G Cd274 CD274 molecule involved_in ISO (PMID:12538684)
(PMID:17489864)
UniProt
AgBase
PMID:12538684 PMID:17489864 NCBI chrNW_004624736:9,991,851...10,017,047
Ensembl chrNW_004624736:9,996,156...10,013,814
JBrowse link
G Crtam cytotoxic and regulatory T cell molecule involved_in ISO (MGI:3834299|PMID:18329370) UniProt PMID:18329370 MGI:3834299 NCBI chrNW_004624880:2,229,201...2,240,068 JBrowse link
G Ido1 indoleamine 2,3-dioxygenase 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3776720|PMID:18077788) MGI
Ensembl
PMID:18077788 GO_REF:0000107 MGI:3776720 NCBI chrNW_004624780:3,684,941...3,697,506
Ensembl chrNW_004624780:3,685,069...3,697,474
JBrowse link
G Laptm5 lysosomal protein transmembrane 5 involved_in ISO (MGI:3803048|PMID:18619870) ARUK-UCL PMID:18619870 MGI:3803048 NCBI chrNW_004624764:14,208,144...14,277,208
Ensembl chrNW_004624764:14,207,094...14,228,135
JBrowse link
G Lgals9 galectin 9 involved_in ISO (PMID:23817958) UniProt PMID:23817958 NCBI chrNW_004624786:478,048...491,086 JBrowse link
G Lrrc32 leucine rich repeat containing 32 acts_upstream_of_or_within ISO (MGI:3807624|PMID:18628982) MGI PMID:18628982 MGI:3807624 NCBI chrNW_004624817:497,415...510,061
Ensembl chrNW_004624817:497,372...510,580
JBrowse link
G Pdcd1lg2 programmed cell death 1 ligand 2 involved_in ISO (PMID:12538684) UniProt PMID:12538684 NCBI chrNW_004624736:10,049,428...10,056,849 JBrowse link
G Prkar1a protein kinase cAMP-dependent type I regulatory subunit alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624870:3,552,608...3,575,461
Ensembl chrNW_004624870:3,552,745...3,574,880
JBrowse link
G Prnp prion protein (Kanno blood group) involved_in ISO (MGI:4943618|PMID:20145049) BHF-UCL PMID:20145049 MGI:4943618 NCBI chrNW_004624741:5,785,139...5,802,162
Ensembl chrNW_004624741:5,785,158...5,802,162
JBrowse link
G Rc3h1 ring finger and CCCH-type domains 1 involved_in ISO (MGI:5284769|PMID:18172933) BHF-UCL PMID:18172933 MGI:5284769 NCBI chrNW_004624771:7,837,547...7,948,217 JBrowse link
G Scrib scribble planar cell polarity protein involved_in ISO (MGI:3834299|PMID:18329370) UniProt PMID:18329370 MGI:3834299 NCBI chrNW_004624735:12,997,358...13,018,765
Ensembl chrNW_004624735:12,997,408...13,018,533
JBrowse link
negative regulation of alpha-beta T cell activation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adora2a adenosine A2a receptor acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3822045|PMID:10069416) MGI
Ensembl
PMID:10069416 GO_REF:0000107 MGI:3822045 NCBI chrNW_004624747:9,846,254...9,860,938
Ensembl chrNW_004624747:9,851,153...9,860,094
JBrowse link
G Vsir V-set immunoregulatory receptor involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624754:5,664,899...5,686,675
Ensembl chrNW_004624754:5,665,445...5,686,692
JBrowse link
negative regulation of alpha-beta T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gli3 GLI family zinc finger 3 involved_in ISO (MGI:4355451|PMID:19667090) BHF-UCL PMID:19667090 MGI:4355451 NCBI chrNW_004624740:18,961,395...19,238,760
Ensembl chrNW_004624740:18,975,596...19,235,900
JBrowse link
G Ihh Indian hedgehog signaling molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624823:5,959,329...5,965,584
Ensembl chrNW_004624823:5,959,448...5,964,769
JBrowse link
G Shh sonic hedgehog signaling molecule acts_upstream_of_or_within ISO (MGI:1888832|PMID:10981962) MGI PMID:10981962 MGI:1888832 NCBI chrNW_004624800:2,202,986...2,215,309
Ensembl chrNW_004624800:2,203,393...2,212,068
JBrowse link
negative regulation of alpha-beta T cell proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Btla B and T lymphocyte associated acts_upstream_of_or_within ISO (MGI:3521631|PMID:15568026) MGI PMID:15568026 MGI:3521631 NCBI chrNW_004624731:36,097,083...36,131,498
Ensembl chrNW_004624731:36,097,156...36,129,669
JBrowse link
G Clec4g C-type lectin domain family 4 member G acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5475030|PMID:23487419) MGI
Ensembl
PMID:23487419 GO_REF:0000107 MGI:5475030 NCBI chrNW_004624828:775,114...778,526
Ensembl chrNW_004624828:773,569...778,615
JBrowse link
G Foxp3 forkhead box P3 acts_upstream_of_or_within ISO (MGI:3692513|PMID:16945588) MGI PMID:16945588 MGI:3692513 NCBI chrNW_004624893:995,145...1,008,492
Ensembl chrNW_004624893:995,182...1,008,679
JBrowse link
negative regulation of CD4-positive, alpha-beta T cell activation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Twsg1 twisted gastrulation BMP signaling modulator 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624770:18,047,790...18,081,559
Ensembl chrNW_004624770:18,047,810...18,081,761
JBrowse link
negative regulation of CD4-positive, alpha-beta T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cbfb core-binding factor subunit beta involved_in ISO (MGI:3772948|PMID:18258917) UniProt PMID:18258917 MGI:3772948 NCBI chrNW_004624746:19,204,415...19,264,217
Ensembl chrNW_004624746:19,204,392...19,264,194
JBrowse link
G Hmgb1 high mobility group box 1 involved_in ISO (PMID:22473704) UniProt PMID:22473704 NCBI chrNW_004624776:7,858,400...7,862,716
Ensembl chrNW_004624776:7,793,259...7,863,184
JBrowse link
G Runx3 RUNX family transcription factor 3 involved_in ISO (MGI:3772948|PMID:18258917) UniProt PMID:18258917 MGI:3772948 NCBI chrNW_004624764:9,192,067...9,218,617
Ensembl chrNW_004624764:9,191,556...9,248,252
JBrowse link
negative regulation of CD4-positive, alpha-beta T cell proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arg2 arginase 2 involved_in ISO (MGI:5908533|PMID:25009204) UniProt PMID:25009204 MGI:5908533 NCBI chrNW_004624734:33,321,161...33,352,306
Ensembl chrNW_004624734:33,321,295...33,352,277
JBrowse link
G Cblb Cbl proto-oncogene B acts_upstream_of_or_within ISO (MGI:3038342|PMID:14973438) MGI PMID:14973438 MGI:3038342 NCBI chrNW_004624731:43,803,743...44,018,682
Ensembl chrNW_004624731:43,803,768...44,015,870
JBrowse link
G Cd274 CD274 molecule involved_in ISO (PMID:24691993) UniProt PMID:24691993 NCBI chrNW_004624736:9,991,851...10,017,047
Ensembl chrNW_004624736:9,996,156...10,013,814
JBrowse link
G Cd44 CD44 molecule (IN blood group) involved_in ISO (MGI:5688819|PMID:25065622) UniProt PMID:25065622 MGI:5688819 NCBI chrNW_004624767:11,938,452...12,024,970
Ensembl chrNW_004624767:11,938,028...12,025,069
JBrowse link
G Foxp3 forkhead box P3 acts_upstream_of_or_within ISO (MGI:3697020|PMID:17028180) MGI PMID:17028180 MGI:3697020 NCBI chrNW_004624893:995,145...1,008,492
Ensembl chrNW_004624893:995,182...1,008,679
JBrowse link
G Itch itchy E3 ubiquitin protein ligase acts_upstream_of_or_within ISO (MGI:3038342|PMID:14973438) MGI PMID:14973438 MGI:3038342 NCBI chrNW_004624842:4,840,848...4,977,785
Ensembl chrNW_004624842:4,842,419...4,935,699
JBrowse link
G Lgals9 galectin 9 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624786:478,048...491,086 JBrowse link
G Ndfip1 Nedd4 family interacting protein 1 acts_upstream_of_or_within ISO (MGI:3694584|PMID:17137798) MGI PMID:17137798 MGI:3694584 NCBI chrNW_004624774:1,245,587...1,353,253
Ensembl chrNW_004624774:1,303,773...1,353,253
JBrowse link
G Tnfrsf14 TNF receptor superfamily member 14 acts_upstream_of_or_within ISO (MGI:3521631|PMID:15568026) MGI PMID:15568026 MGI:3521631 NCBI chrNW_004624818:7,491,473...7,505,185 JBrowse link
G Twsg1 twisted gastrulation BMP signaling modulator 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624770:18,047,790...18,081,559
Ensembl chrNW_004624770:18,047,810...18,081,761
JBrowse link
G Vsir V-set immunoregulatory receptor involved_in
acts_upstream_of_or_within
ISO (PMID:24691993)
(MGI:5292805|PMID:21383057)
UniProt
MGI
PMID:21383057 PMID:24691993 MGI:5292805 NCBI chrNW_004624754:5,664,899...5,686,675
Ensembl chrNW_004624754:5,665,445...5,686,692
JBrowse link
negative regulation of CD8-positive, alpha-beta T cell activation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd274 CD274 molecule involved_in ISO (PMID:28813410), (PMID:28813417) UniProt PMID:28813410 PMID:28813417 NCBI chrNW_004624736:9,991,851...10,017,047
Ensembl chrNW_004624736:9,996,156...10,013,814
JBrowse link
G Dapl1 death associated protein like 1 involved_in ISO (MGI:7414447|PMID:35773432) UniProt PMID:35773432 MGI:7414447 NCBI chrNW_004624732:6,785,704...6,815,349
Ensembl chrNW_004624732:6,785,614...6,815,355
JBrowse link
G Hfe homeostatic iron regulator involved_in ISO (PMID:24643698) BHF-UCL PMID:24643698 NCBI chrNW_004624756:821,738...831,482
Ensembl chrNW_004624756:823,947...831,376
JBrowse link
negative regulation of CD8-positive, alpha-beta T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc4a2 solute carrier family 4 member 2 involved_in ISO (MGI:6840447|PMID:24515893) UniProt PMID:24515893 MGI:6840447 NCBI chrNW_004624800:5,545,380...5,560,789 JBrowse link
G Socs1 suppressor of cytokine signaling 1 involved_in ISO (MGI:6140589|PMID:24880459) UniProt PMID:24880459 MGI:6140589 NCBI chrNW_004624824:8,444,877...8,446,628 JBrowse link
G Zbtb7b zinc finger and BTB domain containing 7B involved_in ISO (MGI:5446998|PMID:22730529), (MGI:6140589|PMID:24880459) UniProt PMID:22730529 PMID:24880459 MGI:5446998 MGI:6140589 NCBI chrNW_004624885:2,474,427...2,489,024
Ensembl chrNW_004624885:2,475,727...2,489,030
JBrowse link
negative regulation of CD8-positive, alpha-beta T cell proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc4a2 solute carrier family 4 member 2 involved_in ISO (MGI:6840447|PMID:24515893) UniProt PMID:24515893 MGI:6840447 NCBI chrNW_004624800:5,545,380...5,560,789 JBrowse link
G Vsir V-set immunoregulatory receptor involved_in ISO (PMID:24691993) UniProt PMID:24691993 NCBI chrNW_004624754:5,664,899...5,686,675
Ensembl chrNW_004624754:5,665,445...5,686,692
JBrowse link
negative regulation of cytotoxic T cell degranulation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nckap1l NCK associated protein 1 like involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624904:2,508,576...2,575,505
Ensembl chrNW_004624904:2,508,799...2,578,609
JBrowse link
negative regulation of immature T cell proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gnrh1 gonadotropin releasing hormone 1 ISO RGD PMID:11092955 RGD:9685051 NCBI chrNW_004624758:20,447,413...20,451,059
Ensembl chrNW_004624758:20,447,583...20,450,968
JBrowse link
negative regulation of immature T cell proliferation in thymus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 involved_in ISO (PMID:12421925) BHF-UCL PMID:12421925 NCBI chrNW_004624731:15,262,480...15,269,196
Ensembl chrNW_004624731:15,263,274...15,269,743
JBrowse link
G Clec4g C-type lectin domain family 4 member G acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5475030|PMID:23487419) MGI
Ensembl
PMID:23487419 GO_REF:0000107 MGI:5475030 NCBI chrNW_004624828:775,114...778,526
Ensembl chrNW_004624828:773,569...778,615
JBrowse link
G Erbb2 erb-b2 receptor tyrosine kinase 2 acts_upstream_of_or_within ISO (MGI:3695084|PMID:16230479) MGI PMID:16230479 MGI:3695084 NCBI chrNW_004624795:3,373,313...3,391,509
Ensembl chrNW_004624795:3,373,000...3,391,602
JBrowse link
G Ihh Indian hedgehog signaling molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624823:5,959,329...5,965,584
Ensembl chrNW_004624823:5,959,448...5,964,769
JBrowse link
G Tmem131l transmembrane 131 like involved_in ISO (PMID:23690469) UniProt PMID:23690469 NCBI chrNW_004624858:4,772,450...4,931,064
Ensembl chrNW_004624858:4,772,457...4,932,593
JBrowse link
negative regulation of memory T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgl2 fibrinogen like 2 acts_upstream_of_or_within ISO (MGI:6188369|PMID:29341118) MGI PMID:29341118 MGI:6188369 NCBI chrNW_004624739:26,501,149...26,507,305
Ensembl chrNW_004624739:26,503,965...26,507,305
JBrowse link
negative regulation of NK T cell activation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd300a CD300a molecule involved_in ISO (PMID:10540326) UniProt PMID:10540326 NCBI chrNW_004624801:4,404,376...4,420,836
Ensembl chrNW_004624801:4,404,262...4,421,097
JBrowse link
negative regulation of NK T cell proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Zbtb7b zinc finger and BTB domain containing 7B involved_in ISO (MGI:5449456|PMID:23105140) UniProt PMID:23105140 MGI:5449456 NCBI chrNW_004624885:2,474,427...2,489,024
Ensembl chrNW_004624885:2,475,727...2,489,030
JBrowse link
negative regulation of positive thymic T cell selection term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ptpn2 protein tyrosine phosphatase non-receptor type 2 involved_in ISO (MGI:5320871|PMID:22080863) UniProt PMID:22080863 MGI:5320871 NCBI chrNW_004624770:19,808,400...19,877,494
Ensembl chrNW_004624770:19,808,400...19,876,503
JBrowse link
negative regulation of regulatory T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd44 CD44 molecule (IN blood group) involved_in ISO (MGI:5688819|PMID:25065622) UniProt PMID:25065622 MGI:5688819 NCBI chrNW_004624767:11,938,452...12,024,970
Ensembl chrNW_004624767:11,938,028...12,025,069
JBrowse link
G Ctla4 cytotoxic T-lymphocyte associated protein 4 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624765:12,449,205...12,454,324
Ensembl chrNW_004624765:12,449,205...12,454,324
JBrowse link
G Hspb1 heat shock protein family B (small) member 1 ISO RGD PMID:30287503 RGD:38549580 NCBI chrNW_004624740:14,940,161...14,941,561
Ensembl chrNW_004624740:14,939,445...14,941,819
JBrowse link
G Irf1 interferon regulatory factor 1 involved_in ISO (MGI:3803082|PMID:18641303) UniProt PMID:18641303 MGI:3803082 NCBI chrNW_004624733:39,596,565...39,603,428
Ensembl chrNW_004624733:39,596,501...39,603,526
JBrowse link
G Lag3 lymphocyte activating 3 involved_in ISO (MGI:3510279|PMID:15485628) UniProt PMID:15485628 MGI:3510279 NCBI chrNW_004624860:3,454,587...3,461,649
Ensembl chrNW_004624860:3,456,347...3,461,592
JBrowse link
G Mdk midkine involved_in ISO (PMID:22323540) UniProt PMID:22323540 NCBI chrNW_004624767:2,171,096...2,173,436
Ensembl chrNW_004624767:2,171,096...2,173,512
JBrowse link
G Tnfsf4 TNF superfamily member 4 involved_in ISO (MGI:3806904|PMID:18713990) BHF-UCL PMID:18713990 MGI:3806904 NCBI chrNW_004624771:8,580,489...8,599,735 JBrowse link
negative regulation of T cell activation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dusp22 dual specificity phosphatase 22 acts_upstream_of_or_within ISO (MGI:5583944|PMID:24714587) MGI PMID:24714587 MGI:5583944 NCBI chrNW_004624756:23,968,148...24,017,340
Ensembl chrNW_004624756:23,968,017...24,017,332
JBrowse link
G Dusp3 dual specificity phosphatase 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624795:994,103...1,001,697 JBrowse link
G Fgl1 fibrinogen like 1 involved_in ISO (MGI:6273588|PMID:30580966) UniProt PMID:30580966 MGI:6273588 NCBI chrNW_004624769:21,308,319...21,350,026
Ensembl chrNW_004624769:21,308,280...21,350,026
JBrowse link
G Gpnmb glycoprotein nmb involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624739:7,358,824...7,386,852
Ensembl chrNW_004624739:7,359,741...7,387,279
JBrowse link
G Il4 interleukin 4 acts_upstream_of_or_within ISO (MGI:3823129|PMID:18997793) MGI PMID:18997793 MGI:3823129 NCBI chrNW_004624733:39,412,800...39,420,079 JBrowse link
G Il4i1 interleukin 4 induced 1 involved_in ISO (PMID:28891065) UniProt PMID:28891065 NCBI chrNW_004624832:4,404,818...4,444,551
Ensembl chrNW_004624832:4,431,903...4,444,651
JBrowse link
G Ildr2 immunoglobulin like domain containing receptor 2 involved_in ISO (PMID:29431694)
(MGI:6121682|PMID:29431694)
UniProt PMID:29431694 MGI:6121682 NCBI chrNW_004624826:4,991,792...5,051,574
Ensembl chrNW_004624826:4,993,274...5,037,627
JBrowse link
G Jak3 Janus kinase 3 involved_in ISO (MGI:3655405|PMID:9498750) BHF-UCL PMID:9498750 MGI:3655405 NCBI chrNW_004624908:1,371,595...1,383,879
Ensembl chrNW_004624908:1,371,595...1,383,879
JBrowse link
G Lag3 lymphocyte activating 3 involved_in
acts_upstream_of_or_within
ISO (MGI:2385414|PMID:12209638), (MGI:6273588|PMID:30580966)
(MGI:2429474|PMID:12421911)
UniProt
MGI
PMID:12209638 PMID:12421911 PMID:30580966 MGI:2385414 MGI:2429474 MGI:6273588 NCBI chrNW_004624860:3,454,587...3,461,649
Ensembl chrNW_004624860:3,456,347...3,461,592
JBrowse link
G Laptm5 lysosomal protein transmembrane 5 involved_in ISO (MGI:3803048|PMID:18619870) ARUK-UCL PMID:18619870 MGI:3803048 NCBI chrNW_004624764:14,208,144...14,277,208
Ensembl chrNW_004624764:14,207,094...14,228,135
JBrowse link
G Lax1 lymphocyte transmembrane adaptor 1 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624807:7,182,094...7,192,412
Ensembl chrNW_004624807:7,183,832...7,192,320
JBrowse link
G Pag1 phosphoprotein membrane anchor with glycosphingolipid microdomains 1 involved_in IEA InterPro
TreeGrafter
Ensembl
GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624744:10,286,013...10,431,383
Ensembl chrNW_004624744:10,361,284...10,424,207
JBrowse link
G Peli1 pellino E3 ubiquitin protein ligase 1 acts_upstream_of_or_within ISO (MGI:5291872|PMID:21874024) MGI PMID:21874024 MGI:5291872 NCBI chrNW_004624762:9,328,275...9,382,996
Ensembl chrNW_004624762:9,328,109...9,386,067
JBrowse link
G Pla2g2d phospholipase A2 group IID acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3851856|PMID:19564598) MGI
Ensembl
PMID:19564598 GO_REF:0000107 MGI:3851856 NCBI chrNW_004624764:5,224,071...5,229,603
Ensembl chrNW_004624764:5,224,018...5,229,609
JBrowse link
G Ptpn22 protein tyrosine phosphatase non-receptor type 22 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624772:9,472,869...9,552,751
Ensembl chrNW_004624772:9,472,913...9,550,990
JBrowse link
G Socs6 suppressor of cytokine signaling 6 acts_upstream_of_or_within ISO (MGI:4838967|PMID:20007709) MGI PMID:20007709 MGI:4838967 NCBI chrNW_004624806:10,921,204...10,949,108 JBrowse link
G Spn sialophorin acts_upstream_of_or_within ISO (MGI:3029937|PMID:9645617) MGI PMID:9645617 MGI:3029937 NCBI chrNW_004624782:13,471,083...13,483,712 JBrowse link
G Tgfb1 transforming growth factor beta 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3641518|PMID:12646629) MGI
Ensembl
PMID:12646629 GO_REF:0000107 MGI:3641518 NCBI chrNW_004624907:162,567...175,696
Ensembl chrNW_004624907:161,569...176,605
JBrowse link
G Tigit T cell immunoreceptor with Ig and ITIM domains acts_upstream_of_or_within
involved_in
ISO (MGI:4939285|PMID:21199897)
(PMID:19011627)
MGI
UniProt
PMID:19011627 PMID:21199897 MGI:4939285 NCBI chrNW_004624731:34,203,313...34,220,389
Ensembl chrNW_004624731:34,203,346...34,220,389
JBrowse link
G Tnfaip8l2 TNF alpha induced protein 8 like 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5295125|PMID:21963221) MGI
TreeGrafter
PMID:21963221 GO_REF:0000118 MGI:5295125 NCBI chrNW_004624772:18,695,670...18,698,304
Ensembl chrNW_004624772:18,695,083...18,697,688
JBrowse link
G Vtcn1 V-set domain containing T cell activation inhibitor 1 acts_upstream_of_or_within
involved_in
ISO (MGI:3521625|PMID:15585831)
(PMID:16606666)
MGI
UniProt
PMID:15585831 PMID:16606666 MGI:3521625 NCBI chrNW_004624772:12,837,940...12,911,263
Ensembl chrNW_004624772:12,837,668...12,911,802
JBrowse link
negative regulation of T cell activation via T cell receptor contact with antigen bound to MHC molecule on antigen presenting cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Havcr2 hepatitis A virus cellular receptor 2 involved_in ISO (PMID:26492563) UniProt PMID:26492563 NCBI chrNW_004624733:32,521,318...32,527,499 JBrowse link
G Lgals3 galectin 3 involved_in ISO (MGI:4355752|PMID:19706535) BHF-UCL PMID:19706535 MGI:4355752 NCBI chrNW_004624731:14,300,138...14,307,843
Ensembl chrNW_004624731:14,298,201...14,304,637
JBrowse link
negative regulation of T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd74 CD74 molecule acts_upstream_of_or_within ISO (MGI:52620|PMID:7679955) MGI PMID:7679955 MGI:52620 NCBI chrNW_004624774:9,699,876...9,708,871
Ensembl chrNW_004624774:9,700,393...9,709,514
JBrowse link
G Cyld CYLD lysine 63 deubiquitinase acts_upstream_of_or_within ISO (MGI:5449492|PMID:23066153) MGI PMID:23066153 MGI:5449492 NCBI chrNW_004624757:5,895,912...5,953,485 JBrowse link
G Dtx1 deltex E3 ubiquitin ligase 1 acts_upstream_of_or_within ISO (MGI:2663321|PMID:12794108) MGI PMID:12794108 MGI:2663321 NCBI chrNW_004624747:19,321,842...19,352,661
Ensembl chrNW_004624747:19,318,465...19,352,473
JBrowse link
G Ifnb1 interferon beta 1 involved_in ISO (PMID:20554961) UniProt PMID:20554961 NCBI chrNW_004624736:25,099,061...25,099,746 JBrowse link
G Nrarp NOTCH regulated ankyrin repeat protein acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2663321|PMID:12794108) MGI
Ensembl
PMID:12794108 GO_REF:0000107 MGI:2663321 NCBI chrNW_004624760:670,796...672,679
Ensembl chrNW_004624760:670,837...671,181
JBrowse link
G Prdx2 peroxiredoxin 2 acts_upstream_of_or_within ISO (MGI:3796974|PMID:16290204) MGI PMID:16290204 MGI:3796974 NCBI chrNW_004624901:407,240...410,902
Ensembl chrNW_004624901:406,257...410,866
JBrowse link
negative regulation of T cell differentiation in thymus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 involved_in ISO (PMID:12421925) BHF-UCL PMID:12421925 NCBI chrNW_004624731:15,262,480...15,269,196
Ensembl chrNW_004624731:15,263,274...15,269,743
JBrowse link
G Foxj1 forkhead box J1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624801:6,025,756...6,030,487
Ensembl chrNW_004624801:6,025,793...6,030,486
JBrowse link
G Ihh Indian hedgehog signaling molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624823:5,959,329...5,965,584
Ensembl chrNW_004624823:5,959,448...5,964,769
JBrowse link
G Nfkbid NFKB inhibitor delta acts_upstream_of_or_within ISO (MGI:2177878|PMID:11931770) MGI PMID:11931770 MGI:2177878 NCBI chrNW_004624794:10,172,789...10,180,693
Ensembl chrNW_004624794:10,168,792...10,179,510
JBrowse link
G Rag2 recombination activating 2 ISO RGD PMID:30206106 RGD:38508903 NCBI chrNW_004624767:10,678,547...10,680,130
Ensembl chrNW_004624767:10,678,359...10,680,132
JBrowse link
G Shh sonic hedgehog signaling molecule acts_upstream_of_or_within ISO (MGI:1888832|PMID:10981962) MGI PMID:10981962 MGI:1888832 NCBI chrNW_004624800:2,202,986...2,215,309
Ensembl chrNW_004624800:2,203,393...2,212,068
JBrowse link
G Zc3h8 zinc finger CCCH-type containing 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624749:137,599...169,641
Ensembl chrNW_004624749:137,721...169,324
JBrowse link
negative regulation of T cell homeostatic proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd24 CD24 molecule acts_upstream_of_or_within ISO (MGI:3721471|PMID:16769998) MGI PMID:16769998 MGI:3721471 NCBI chrNW_004624780:15,287,426...15,292,292
Ensembl chrNW_004624780:15,287,433...15,292,292
JBrowse link
negative regulation of T cell proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arg1 arginase 1 involved_in ISO (PMID:16709924) UniProt PMID:16709924 NCBI chrNW_004624753:5,737,720...5,749,313
Ensembl chrNW_004624753:5,737,237...5,752,966
JBrowse link
G Btla B and T lymphocyte associated acts_upstream_of_or_within ISO (MGI:2665193|PMID:12796776) MGI PMID:12796776 MGI:2665193 NCBI chrNW_004624731:36,097,083...36,131,498
Ensembl chrNW_004624731:36,097,156...36,129,669
JBrowse link
G Cd274 CD274 molecule acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3689239|PMID:17016562) MGI
TreeGrafter
PMID:17016562 GO_REF:0000118 MGI:3689239 NCBI chrNW_004624736:9,991,851...10,017,047
Ensembl chrNW_004624736:9,996,156...10,013,814
JBrowse link
G Cd276 CD276 molecule acts_upstream_of_or_within ISO (MGI:2671029|PMID:12925852) MGI PMID:12925852 MGI:2671029 NCBI chrNW_004624781:691,348...703,202 JBrowse link
G Cd37 CD37 molecule acts_upstream_of_or_within ISO (MGI:4830018|PMID:20709950) MGI PMID:20709950 MGI:4830018 NCBI chrNW_004624832:4,837,247...4,842,126
Ensembl chrNW_004624832:4,837,247...4,841,756
JBrowse link
G Cd80 CD80 molecule involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624731:28,630,540...28,655,297
Ensembl chrNW_004624731:28,630,446...28,651,994
JBrowse link
G Cd86 CD86 molecule involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624912:350,201...432,410
Ensembl chrNW_004624912:350,157...426,712
JBrowse link
G Cebpb CCAAT enhancer binding protein beta involved_in ISO (MGI:3773092|PMID:16585579) UniProt PMID:16585579 MGI:3773092 NCBI chrNW_004624790:5,367,808...5,369,686
Ensembl chrNW_004624790:5,368,349...5,369,377
JBrowse link
G Clec4g C-type lectin domain family 4 member G acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5510582|PMID:19632227) MGI
Ensembl
PMID:19632227 GO_REF:0000107 MGI:5510582 NCBI chrNW_004624828:775,114...778,526
Ensembl chrNW_004624828:773,569...778,615
JBrowse link
G Ctla4 cytotoxic T-lymphocyte associated protein 4 ISO RGD PMID:15849541 RGD:2302005 NCBI chrNW_004624765:12,449,205...12,454,324
Ensembl chrNW_004624765:12,449,205...12,454,324
JBrowse link
G Dlg1 discs large MAGUK scaffold protein 1 acts_upstream_of_or_within ISO (MGI:3768613|PMID:17724087) MGI PMID:17724087 MGI:3768613 NCBI chrNW_004624730:62,001,547...62,223,098
Ensembl chrNW_004624730:62,002,280...62,223,319
JBrowse link
G Dlg5 discs large MAGUK scaffold protein 5 involved_in ISO (PMID:28169360) UniProt PMID:28169360 NCBI chrNW_004624754:11,033,649...11,155,271
Ensembl chrNW_004624754:11,036,716...11,155,256
JBrowse link
G Foxj1 forkhead box J1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624801:6,025,756...6,030,487
Ensembl chrNW_004624801:6,025,793...6,030,486
JBrowse link
G Foxp3 forkhead box P3 acts_upstream_of_or_within
involved_in
ISO (MGI:3607665|PMID:16203996)
(PMID:21458306), (PMID:23169781)
(PMID:15466453)
(MGI:3693968|PMID:16769892)
MGI
UniProt
PMID:15466453 PMID:16203996 PMID:16769892 PMID:21458306 PMID:23169781 MGI:3607665 MGI:3693968 NCBI chrNW_004624893:995,145...1,008,492
Ensembl chrNW_004624893:995,182...1,008,679
JBrowse link
G Glmn glomulin, FKBP associated protein involved_in ISO (PMID:12604780) UniProt PMID:12604780 NCBI chrNW_004624742:5,434,588...5,477,647 JBrowse link
G Gpnmb glycoprotein nmb involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624739:7,358,824...7,386,852
Ensembl chrNW_004624739:7,359,741...7,387,279
JBrowse link
G Havcr2 hepatitis A virus cellular receptor 2 involved_in ISO (MGI:2679123|PMID:14556006) UniProt PMID:14556006 MGI:2679123 NCBI chrNW_004624733:32,521,318...32,527,499 JBrowse link
G Ido1 indoleamine 2,3-dioxygenase 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3776720|PMID:18077788) MGI
Ensembl
PMID:18077788 GO_REF:0000107 MGI:3776720 NCBI chrNW_004624780:3,684,941...3,697,506
Ensembl chrNW_004624780:3,685,069...3,697,474
JBrowse link
G Il20rb interleukin 20 receptor subunit beta acts_upstream_of_or_within ISO (MGI:3827040|PMID:19124723) MGI PMID:19124723 MGI:3827040 NCBI chrNW_004624730:13,371,898...13,408,927
Ensembl chrNW_004624730:13,378,478...13,409,676
JBrowse link
G Il2ra interleukin 2 receptor subunit alpha acts_upstream_of_or_within ISO (MGI:2670301|PMID:12702495) MGI PMID:12702495 MGI:2670301 NCBI chrNW_004624775:927,337...991,062
Ensembl chrNW_004624775:924,648...942,354
JBrowse link
G Il4i1 interleukin 4 induced 1 involved_in ISO (PMID:17356132) UniProt PMID:17356132 NCBI chrNW_004624832:4,404,818...4,444,551
Ensembl chrNW_004624832:4,431,903...4,444,651
JBrowse link
G LOC101703821 HLA class II histocompatibility antigen, DQ beta 1 chain ISO RGD PMID:9834080 RGD:5147666 NCBI chrNW_004624754:23,895,509...23,902,487
Ensembl chrNW_004624754:23,895,607...23,906,713
JBrowse link
G Mad1l1 mitotic arrest deficient 1 like 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1932181|PMID:11313860) MGI
Ensembl
PMID:11313860 GO_REF:0000107 MGI:1932181 NCBI chrNW_004624740:27,174,450...27,523,366
Ensembl chrNW_004624740:27,174,354...27,523,492
JBrowse link
G Marchf7 membrane associated ring-CH-type finger 7 acts_upstream_of_or_within ISO (MGI:3529633|PMID:15670816) MGI PMID:15670816 MGI:3529633 NCBI chrNW_004624732:5,889,181...5,928,471 JBrowse link
G Pawr pro-apoptotic WT1 regulator acts_upstream_of_or_within ISO (MGI:2675524|PMID:12970181) MGI PMID:12970181 MGI:2675524 NCBI chrNW_004624750:18,562,270...18,710,397
Ensembl chrNW_004624750:18,562,221...18,705,540
JBrowse link
G Pdcd1lg2 programmed cell death 1 ligand 2 acts_upstream_of_or_within ISO (MGI:1931613|PMID:11224527), (MGI:3689239|PMID:17016562) MGI PMID:11224527 PMID:17016562 MGI:1931613 MGI:3689239 NCBI chrNW_004624736:10,049,428...10,056,849 JBrowse link
G Pde5a phosphodiesterase 5A acts_upstream_of_or_within ISO (MGI:3722008|PMID:17101732) MGI PMID:17101732 MGI:3722008 NCBI chrNW_004624964:11,085...126,027
Ensembl chrNW_004624964:14,216...126,553
JBrowse link
G Peli1 pellino E3 ubiquitin protein ligase 1 acts_upstream_of_or_within ISO (MGI:5291872|PMID:21874024) MGI PMID:21874024 MGI:5291872 NCBI chrNW_004624762:9,328,275...9,382,996
Ensembl chrNW_004624762:9,328,109...9,386,067
JBrowse link
G Pla2g2a phospholipase A2 group IIA NOT|acts_upstream_of_or_within ISO (MGI:3851856|PMID:19564598) MGI PMID:19564598 MGI:3851856 NCBI chrNW_004624764:5,144,549...5,152,517
Ensembl chrNW_004624764:5,144,549...5,151,995
JBrowse link
G Pla2g2d phospholipase A2 group IID acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3851856|PMID:19564598) MGI
TreeGrafter
Ensembl
PMID:19564598 GO_REF:0000107 GO_REF:0000118 MGI:3851856 NCBI chrNW_004624764:5,224,071...5,229,603
Ensembl chrNW_004624764:5,224,018...5,229,609
JBrowse link
G Pla2g2f phospholipase A2 group IIF acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3695953|PMID:16931517) MGI
TreeGrafter
Ensembl
PMID:16931517 GO_REF:0000107 GO_REF:0000118 MGI:3695953 NCBI chrNW_004624764:5,243,507...5,249,842
Ensembl chrNW_004624764:5,244,152...5,249,842
JBrowse link
G Pla2g5 phospholipase A2 group V involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624764:5,196,215...5,207,138
Ensembl chrNW_004624764:5,196,215...5,207,232
JBrowse link
G Pten phosphatase and tensin homolog acts_upstream_of_or_within ISO (MGI:3586939|PMID:16027169) MGI PMID:16027169 MGI:3586939 NCBI chrNW_004624791:13,975,235...14,056,900 JBrowse link
G Ptpn6 protein tyrosine phosphatase non-receptor type 6 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:82729|PMID:9064344) MGI
Ensembl
PMID:9064344 GO_REF:0000107 MGI:82729 NCBI chrNW_004624860:3,580,225...3,595,403
Ensembl chrNW_004624860:3,580,560...3,595,090
JBrowse link
G Scgb1a1 secretoglobin family 1A member 1 acts_upstream_of_or_within ISO (MGI:3615741|PMID:15356574) MGI PMID:15356574 MGI:3615741 NCBI chrNW_004624926:1,029,120...1,030,250 JBrowse link
G Sdc4 syndecan 4 involved_in ISO (PMID:19350579) ParkinsonsUK-UCL PMID:19350579 NCBI chrNW_004624790:9,146,371...9,166,729
Ensembl chrNW_004624790:9,145,745...9,169,526
JBrowse link
G Sftpd surfactant protein D ISO RGD PMID:9794387 RGD:4144057 NCBI chrNW_004624841:6,917,067...6,938,594
Ensembl chrNW_004624841:6,916,849...6,936,077
JBrowse link
G Shh sonic hedgehog signaling molecule acts_upstream_of_or_within ISO (MGI:1888832|PMID:10981962) MGI PMID:10981962 MGI:1888832 NCBI chrNW_004624800:2,202,986...2,215,309
Ensembl chrNW_004624800:2,203,393...2,212,068
JBrowse link
G Spn sialophorin acts_upstream_of_or_within
involved_in
ISO (MGI:3029937|PMID:9645617), (MGI:3510556|PMID:15117976), (MGI:76803|PMID:7566153)
(MGI:3847636|PMID:17638845)
MGI
UniProt
PMID:7566153 PMID:9645617 PMID:15117976 PMID:17638845 MGI:3029937 MGI:3510556 MGI:3847636 MGI:76803 NCBI chrNW_004624782:13,471,083...13,483,712 JBrowse link
G Tgfb1 transforming growth factor beta 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3718815|PMID:17481928) MGI
Ensembl
PMID:17481928 GO_REF:0000107 MGI:3718815 NCBI chrNW_004624907:162,567...175,696
Ensembl chrNW_004624907:161,569...176,605
JBrowse link
G Tnfrsf21 TNF receptor superfamily member 21 involved_in ISO (MGI:2137821|PMID:11485735) UniProt PMID:11485735 MGI:2137821 NCBI chrNW_004624754:13,567,898...13,633,368
Ensembl chrNW_004624754:13,567,734...13,634,009
JBrowse link
G Tsc2 TSC complex subunit 2 acts_upstream_of_or_within ISO (MGI:3586939|PMID:16027169) MGI PMID:16027169 MGI:3586939 NCBI chrNW_004624913:166,931...203,008
Ensembl chrNW_004624913:166,931...202,953
JBrowse link
G Tspan32 tetraspanin 32 acts_upstream_of_or_within ISO (MGI:4830018|PMID:20709950) MGI PMID:20709950 MGI:4830018 NCBI chrNW_004624767:15,107,448...15,160,379
Ensembl chrNW_004624767:15,143,732...15,157,206
JBrowse link
G Vsig4 V-set and immunoglobulin domain containing 4 acts_upstream_of_or_within ISO (MGI:3689239|PMID:17016562) MGI PMID:17016562 MGI:3689239 NCBI chrNW_004624898:1,268,998...1,288,756
Ensembl chrNW_004624898:1,268,886...1,289,180
JBrowse link
G Vtcn1 V-set domain containing T cell activation inhibitor 1 involved_in ISO (PMID:16606666) UniProt PMID:16606666 NCBI chrNW_004624772:12,837,940...12,911,263
Ensembl chrNW_004624772:12,837,668...12,911,802
JBrowse link
G Zc3h12d zinc finger CCCH-type containing 12D acts_upstream_of_or_within ISO (MGI:5567042|PMID:24415781) MGI PMID:24415781 MGI:5567042 NCBI chrNW_004624785:8,588,480...8,613,199 JBrowse link
negative regulation of T-helper 1 cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ascl2 achaete-scute family bHLH transcription factor 2 involved_in ISO (MGI:5565031|PMID:24463518) UniProt PMID:24463518 MGI:5565031 NCBI chrNW_004624767:15,107,157...15,111,696
Ensembl chrNW_004624767:15,107,159...15,109,191
JBrowse link
G Il4r interleukin 4 receptor acts_upstream_of_or_within ISO (MGI:3761239|PMID:16424184) MGI PMID:16424184 MGI:3761239 NCBI chrNW_004624782:11,981,781...12,008,362 JBrowse link
G Jak3 Janus kinase 3 involved_in ISO (MGI:3719947|PMID:16020505) BHF-UCL PMID:16020505 MGI:3719947 NCBI chrNW_004624908:1,371,595...1,383,879
Ensembl chrNW_004624908:1,371,595...1,383,879
JBrowse link
G Tnfsf4 TNF superfamily member 4 involved_in ISO (MGI:4942267|PMID:9670042) BHF-UCL PMID:9670042 MGI:4942267 NCBI chrNW_004624771:8,580,489...8,599,735 JBrowse link
negative regulation of T-helper 17 cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ascl2 achaete-scute family bHLH transcription factor 2 involved_in ISO (MGI:5565031|PMID:24463518) UniProt PMID:24463518 MGI:5565031 NCBI chrNW_004624767:15,107,157...15,111,696
Ensembl chrNW_004624767:15,107,159...15,109,191
JBrowse link
G Foxp3 forkhead box P3 involved_in ISO (PMID:23169781) UniProt PMID:23169781 NCBI chrNW_004624893:995,145...1,008,492
Ensembl chrNW_004624893:995,182...1,008,679
JBrowse link
G Il2 interleukin 2 involved_in ISO (MGI:5634593|PMID:25642768) BHF-UCL PMID:25642768 MGI:5634593 NCBI chrNW_004624777:2,885,537...2,890,453
Ensembl chrNW_004624777:2,885,535...2,890,453
JBrowse link
G Il4 interleukin 4 acts_upstream_of_or_within ISO (MGI:3817792|PMID:18792410) MGI PMID:18792410 MGI:3817792 NCBI chrNW_004624733:39,412,800...39,420,079 JBrowse link
G Rc3h1 ring finger and CCCH-type domains 1 involved_in ISO (MGI:6142401|PMID:25282160) UniProt PMID:25282160 MGI:6142401 NCBI chrNW_004624771:7,837,547...7,948,217 JBrowse link
G Rc3h2 ring finger and CCCH-type domains 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624760:12,025,206...12,074,548 JBrowse link
G Smad7 SMAD family member 7 involved_in ISO (MGI:5634593|PMID:25642768) BHF-UCL PMID:25642768 MGI:5634593 NCBI chrNW_004624778:12,415,364...12,444,882
Ensembl chrNW_004624778:12,415,282...12,444,835
JBrowse link
G Tbx21 T-box transcription factor 21 involved_in ISO (MGI:4868293|PMID:21151104) UniProt PMID:21151104 MGI:4868293 NCBI chrNW_004624795:4,442,188...4,453,544
Ensembl chrNW_004624795:4,442,188...4,453,143
JBrowse link
G Zbtb7b zinc finger and BTB domain containing 7B acts_upstream_of_or_within ISO (MGI:5450776|PMID:23034280) MGI PMID:23034280 MGI:5450776 NCBI chrNW_004624885:2,474,427...2,489,024
Ensembl chrNW_004624885:2,475,727...2,489,030
JBrowse link
G Zc3h12a zinc finger CCCH-type containing 12A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624764:20,224,919...20,234,108
Ensembl chrNW_004624764:20,224,906...20,234,629
JBrowse link
negative regulation of T-helper 17 cell lineage commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Loxl3 lysyl oxidase like 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624749:28,959,682...28,980,428
Ensembl chrNW_004624749:28,960,593...28,980,428
JBrowse link
G Tbx21 T-box transcription factor 21 involved_in ISO (MGI:4868293|PMID:21151104) UniProt PMID:21151104 MGI:4868293 NCBI chrNW_004624795:4,442,188...4,453,544
Ensembl chrNW_004624795:4,442,188...4,453,143
JBrowse link
G Tnfsf18 TNF superfamily member 18 involved_in ISO (MGI:5551556|PMID:24107315) UniProt PMID:24107315 MGI:5551556 NCBI chrNW_004624771:8,711,093...8,722,518
Ensembl chrNW_004624771:8,711,017...8,722,539
JBrowse link
negative regulation of T-helper 2 cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Anxa1 annexin A1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624811:765,338...782,203
Ensembl chrNW_004624811:764,940...782,198
JBrowse link
G Ascl2 achaete-scute family bHLH transcription factor 2 involved_in ISO (MGI:5565031|PMID:24463518) UniProt PMID:24463518 MGI:5565031 NCBI chrNW_004624767:15,107,157...15,111,696
Ensembl chrNW_004624767:15,107,159...15,109,191
JBrowse link
G Bcl6 BCL6 transcription repressor acts_upstream_of_or_within ISO (MGI:2450484|PMID:12594267) MGI PMID:12594267 MGI:2450484 NCBI chrNW_004624730:69,145,035...69,167,583
Ensembl chrNW_004624730:69,154,080...69,167,689
JBrowse link
G Hlx H2.0 like homeobox acts_upstream_of_or_within ISO (MGI:3761239|PMID:16424184) MGI PMID:16424184 MGI:3761239 NCBI chrNW_004624835:4,223,252...4,227,892
Ensembl chrNW_004624835:4,223,511...4,227,979
JBrowse link
G Socs5 suppressor of cytokine signaling 5 involved_in ISO (MGI:3687909|PMID:12242343) UniProt PMID:12242343 MGI:3687909 NCBI chrNW_004624738:28,150,004...28,217,850
Ensembl chrNW_004624738:28,150,664...28,216,389
JBrowse link
negative regulation of T-helper cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rc3h1 ring finger and CCCH-type domains 1 acts_upstream_of_or_within ISO (MGI:3580753|PMID:15917799) MGI PMID:15917799 MGI:3580753 NCBI chrNW_004624771:7,837,547...7,948,217 JBrowse link
negative T cell selection term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Themis thymocyte selection associated involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624753:2,214,779...2,292,936 JBrowse link
negative thymic T cell selection term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aire autoimmune regulator acts_upstream_of_or_within ISO (MGI:5488556|PMID:23382543) MGI PMID:23382543 MGI:5488556 NCBI chrNW_004624745:29,850,410...29,857,351
Ensembl chrNW_004624745:29,850,560...29,857,029
JBrowse link
G Atg5 autophagy related 5 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5488556|PMID:23382543) MGI
Ensembl
PMID:23382543 GO_REF:0000107 MGI:5488556 NCBI chrNW_004624780:15,987,483...16,124,158
Ensembl chrNW_004624780:15,987,397...16,124,151
JBrowse link
G Ccr7 C-C motif chemokine receptor 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624795:2,777,766...2,787,664
Ensembl chrNW_004624795:2,779,627...2,788,897
JBrowse link
G Cd28 CD28 molecule acts_upstream_of_or_within ISO (MGI:1340173|PMID:10429671) MGI PMID:10429671 MGI:1340173 NCBI chrNW_004624765:12,650,092...12,667,168 JBrowse link
G Cd3e CD3e molecule acts_upstream_of_or_within ISO (MGI:75253|PMID:7630421) MGI PMID:7630421 MGI:75253 NCBI chrNW_004624784:13,714,667...13,726,881
Ensembl chrNW_004624784:13,712,920...13,726,950
JBrowse link
G Cd74 CD74 molecule acts_upstream_of_or_within ISO (MGI:52620|PMID:7679955) MGI PMID:7679955 MGI:52620 NCBI chrNW_004624774:9,699,876...9,708,871
Ensembl chrNW_004624774:9,700,393...9,709,514
JBrowse link
G Dock2 dedicator of cytokinesis 2 acts_upstream_of_or_within ISO (MGI:2668308|PMID:12871644) MGI PMID:12871644 MGI:2668308 NCBI chrNW_004624733:19,882,234...20,315,211
Ensembl chrNW_004624733:19,883,027...20,315,128
JBrowse link
G Fas Fas cell surface death receptor acts_upstream_of_or_within ISO (MGI:1340173|PMID:10429671) MGI PMID:10429671 MGI:1340173 NCBI chrNW_004624791:15,290,022...15,315,848
Ensembl chrNW_004624791:15,289,348...15,315,848
JBrowse link
G Gli3 GLI family zinc finger 3 involved_in ISO (MGI:4355451|PMID:19667090) BHF-UCL PMID:19667090 MGI:4355451 NCBI chrNW_004624740:18,961,395...19,238,760
Ensembl chrNW_004624740:18,975,596...19,235,900
JBrowse link
G LOC101716577 tyrosine-protein kinase ZAP-70 acts_upstream_of_or_within ISO (MGI:75253|PMID:7630421) MGI PMID:7630421 MGI:75253 NCBI chrNW_004624749:2,893,601...2,901,256
Ensembl chrNW_004624749:2,893,601...2,901,035
JBrowse link
G Mink1 misshapen like kinase 1 acts_upstream_of_or_within ISO (MGI:3521627|PMID:15608642) MGI PMID:15608642 MGI:3521627 NCBI chrNW_004624786:8,711,388...8,764,102
Ensembl chrNW_004624786:8,711,263...8,763,343
JBrowse link
G Ptprc protein tyrosine phosphatase receptor type C acts_upstream_of_or_within ISO (MGI:80946|PMID:8666928) MGI PMID:8666928 MGI:80946 NCBI chrNW_004624798:1,700,732...1,814,603
Ensembl chrNW_004624798:1,699,541...1,814,656
JBrowse link
G Shh sonic hedgehog signaling molecule involved_in ISO (MGI:3834308|PMID:17227833) BHF-UCL PMID:17227833 MGI:3834308 NCBI chrNW_004624800:2,202,986...2,215,309
Ensembl chrNW_004624800:2,203,393...2,212,068
JBrowse link
G Spn sialophorin acts_upstream_of_or_within ISO (MGI:1340173|PMID:10429671) MGI PMID:10429671 MGI:1340173 NCBI chrNW_004624782:13,471,083...13,483,712 JBrowse link
NK T cell activation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clec4f C-type lectin domain family 4 member F acts_upstream_of_or_within ISO (MGI:5525181|PMID:23762286) MGI PMID:23762286 MGI:5525181 NCBI chrNW_004624762:2,567,854...2,584,329
Ensembl chrNW_004624762:2,567,794...2,584,493
JBrowse link
NK T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atf2 activating transcription factor 2 involved_in ISO (MGI:3763962|PMID:16223777) MGI PMID:16223777 MGI:3763962 NCBI chrNW_004624787:12,241,838...12,338,089 JBrowse link
G Fosl2 FOS like 2, AP-1 transcription factor subunit acts_upstream_of_or_within ISO (MGI:4354430|PMID:19620306) MGI PMID:19620306 MGI:4354430 NCBI chrNW_004624738:10,370,479...10,391,623
Ensembl chrNW_004624738:10,370,103...10,391,623
JBrowse link
G Itk IL2 inducible T cell kinase acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3773943|PMID:18292523) MGI
TreeGrafter
Ensembl
PMID:18292523 GO_REF:0000107 GO_REF:0000118 MGI:3773943 NCBI chrNW_004624733:32,125,005...32,198,901
Ensembl chrNW_004624733:32,127,388...32,198,869
JBrowse link
G Psap prosaposin acts_upstream_of_or_within ISO (MGI:3043877|PMID:14684827) MGI PMID:14684827 MGI:3043877 NCBI chrNW_004624754:5,725,697...5,753,575
Ensembl chrNW_004624754:5,726,681...5,753,575
JBrowse link
G Stk17a serine/threonine kinase 17a involved_in ISO (MGI:5694641|PMID:26423156) MGI PMID:26423156 MGI:5694641 NCBI chrNW_004624740:17,629,810...17,659,046 JBrowse link
G Txk TXK tyrosine kinase acts_upstream_of_or_within ISO (MGI:3773943|PMID:18292523) MGI PMID:18292523 MGI:3773943 NCBI chrNW_004624761:18,841,795...18,897,564
Ensembl chrNW_004624761:18,841,795...18,897,458
JBrowse link
G Zbtb7b zinc finger and BTB domain containing 7B involved_in ISO (MGI:5449456|PMID:23105140) UniProt PMID:23105140 MGI:5449456 NCBI chrNW_004624885:2,474,427...2,489,024
Ensembl chrNW_004624885:2,475,727...2,489,030
JBrowse link
G Znf683 zinc finger protein 683 acts_upstream_of_or_within ISO (MGI:5437828|PMID:22885984) MGI PMID:22885984 MGI:5437828 NCBI chrNW_004624764:10,382,733...10,388,608 JBrowse link
NK T cell lineage commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tox thymocyte selection associated high mobility group box involved_in ISO (MGI:3773459|PMID:18195075) UniProt PMID:18195075 MGI:3773459 NCBI chrNW_004624744:32,865,781...33,218,453
Ensembl chrNW_004624744:32,865,720...33,218,643
JBrowse link
NK T cell proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Elf4 E74 like ETS transcription factor 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624797:9,285,586...9,330,291
Ensembl chrNW_004624797:9,286,173...9,330,381
JBrowse link
G Il15 interleukin 15 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1354083|PMID:10704459) MGI
Ensembl
PMID:10704459 GO_REF:0000107 MGI:1354083 NCBI chrNW_004624853:1,059,625...1,144,799
Ensembl chrNW_004624853:1,128,519...1,144,941
JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor involved_in ISO (MGI:3849544|PMID:19423665) MGI PMID:19423665 MGI:3849544 NCBI chrNW_004624735:27,780,338...27,784,714
Ensembl chrNW_004624735:27,780,037...27,784,806
JBrowse link
positive regulation of activated T cell proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ager advanced glycosylation end-product specific receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624754:24,138,086...24,140,900 JBrowse link
G Cd24 CD24 molecule involved_in ISS UniProt GO_REF:0000024 NCBI chrNW_004624780:15,287,426...15,292,292
Ensembl chrNW_004624780:15,287,433...15,292,292
JBrowse link
G Cd86 CD86 molecule ISO RGD PMID:9237108 RGD:632472 NCBI chrNW_004624912:350,201...432,410
Ensembl chrNW_004624912:350,157...426,712
JBrowse link
G Fadd Fas associated via death domain involved_in IEA
ISS
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chrNW_004624767:17,050,929...17,059,648
Ensembl chrNW_004624767:17,055,509...17,059,705
JBrowse link
G Gpam glycerol-3-phosphate acyltransferase, mitochondrial acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3826295|PMID:18971390) MGI
Ensembl
PMID:18971390 GO_REF:0000107 MGI:3826295 NCBI chrNW_004624737:34,198,773...34,268,815
Ensembl chrNW_004624737:34,198,518...34,265,192
JBrowse link
G Hhla2 HHLA2 member of B7 family involved_in ISO (PMID:23784006) UniProt PMID:23784006 NCBI chrNW_004624731:41,153,064...41,251,779
Ensembl chrNW_004624731:41,151,649...41,248,520
JBrowse link
G Hmgb1 high mobility group box 1 involved_in ISO (PMID:15944249) UniProt PMID:15944249 NCBI chrNW_004624776:7,858,400...7,862,716
Ensembl chrNW_004624776:7,793,259...7,863,184
JBrowse link
G Igf1 insulin like growth factor 1 involved_in ISO (PMID:15694994) BHF-UCL PMID:15694994 NCBI chrNW_004624750:5,881,065...5,954,799
Ensembl chrNW_004624750:5,881,091...5,952,300
JBrowse link
G Igf2 insulin like growth factor 2 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624767:14,969,977...14,997,577
Ensembl chrNW_004624767:14,969,866...14,979,026
JBrowse link
G Igfbp2 insulin like growth factor binding protein 2 involved_in ISO (PMID:15694994) BHF-UCL PMID:15694994 NCBI chrNW_004624823:8,460,968...8,486,495
Ensembl chrNW_004624823:8,460,553...8,486,495
JBrowse link
G Il12b interleukin 12B involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624733:30,146,050...30,156,144
Ensembl chrNW_004624733:30,146,050...30,154,589
JBrowse link
G Il12rb1 interleukin 12 receptor subunit beta 1 involved_in ISO (PMID:11114383) BHF-UCL PMID:11114383 NCBI chrNW_004624908:1,472,059...1,481,423 JBrowse link
G Il18 interleukin 18 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624784:7,294,286...7,312,959
Ensembl chrNW_004624784:7,294,183...7,304,687
JBrowse link
G Il2 interleukin 2 acts_upstream_of_or_within ISO (PMID:10072077), (PMID:1830926)
(MGI:1889048|PMID:7584142), (MGI:3577956|PMID:10485657)
(MGI:87443|PMID:1830926)
MGI PMID:1830926 PMID:7584142 PMID:10072077 PMID:10485657 MGI:1889048 MGI:3577956 MGI:87443 NCBI chrNW_004624777:2,885,537...2,890,453
Ensembl chrNW_004624777:2,885,535...2,890,453
JBrowse link
G Il23a interleukin 23 subunit alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624802:11,662,851...11,664,444
Ensembl chrNW_004624802:11,662,753...11,665,418
JBrowse link
G Il2ra interleukin 2 receptor subunit alpha acts_upstream_of_or_within ISO (MGI:1889048|PMID:7584142) MGI PMID:7584142 MGI:1889048 NCBI chrNW_004624775:927,337...991,062
Ensembl chrNW_004624775:924,648...942,354
JBrowse link
G Il4 interleukin 4 acts_upstream_of_or_within ISO (MGI:3577956|PMID:10485657), (MGI:3655409|PMID:9841920) MGI PMID:9841920 PMID:10485657 MGI:3577956 MGI:3655409 NCBI chrNW_004624733:39,412,800...39,420,079 JBrowse link
G Jak3 Janus kinase 3 ISO RGD PMID:11781254 RGD:1600262 NCBI chrNW_004624908:1,371,595...1,383,879
Ensembl chrNW_004624908:1,371,595...1,383,879
JBrowse link
G Ppp3ca protein phosphatase 3 catalytic subunit alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624830:6,318,352...6,584,232
Ensembl chrNW_004624830:6,317,968...6,581,892
JBrowse link
G Pycard PYD and CARD domain containing involved_in ISO (MGI:5291858|PMID:21892172) UniProt PMID:21892172 MGI:5291858 NCBI chrNW_004624782:14,247,333...14,249,861
Ensembl chrNW_004624782:14,247,864...14,249,000
JBrowse link
G Rps3 ribosomal protein S3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624817:1,710,768...1,715,923
Ensembl chrNW_004624817:1,710,768...1,716,224
JBrowse link
G Slamf1 signaling lymphocytic activation molecule family member 1 involved_in ISO (MGI:5700493|PMID:9126961) UniProt PMID:9126961 MGI:5700493 NCBI chrNW_004624794:627,906...661,257 JBrowse link
G Tmigd2 transmembrane and immunoglobulin domain containing 2 involved_in ISO (PMID:23784006) UniProt PMID:23784006 NCBI chrNW_004624828:5,363,038...5,367,301 JBrowse link
G Tnfsf4 TNF superfamily member 4 ISO RGD PMID:9790919 RGD:634509 NCBI chrNW_004624771:8,580,489...8,599,735 JBrowse link
G Tnfsf9 TNF superfamily member 9 ISO RGD PMID:19187795 RGD:2317344 NCBI chrNW_004624828:3,615,860...3,623,377 JBrowse link
positive regulation of alpha-beta T cell activation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC101703821 HLA class II histocompatibility antigen, DQ beta 1 chain involved_in ISO (MGI:4943670|PMID:9610637)
(MGI:4942246|PMID:14607905)
BHF-UCL PMID:9610637 PMID:14607905 MGI:4942246 MGI:4943670 NCBI chrNW_004624754:23,895,509...23,902,487
Ensembl chrNW_004624754:23,895,607...23,906,713
JBrowse link
positive regulation of alpha-beta T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ada adenosine deaminase acts_upstream_of_or_within ISO (MGI:3620422|PMID:12163459), (MGI:3690682|PMID:11067867), (MGI:3774231|PMID:16670300)
(MGI:3690682|PMID:11067867), (MGI:3774231|PMID:16670300)
MGI PMID:11067867 PMID:12163459 PMID:16670300 MGI:3620422 MGI:3690682 MGI:3774231 NCBI chrNW_004624790:9,809,550...9,829,199
Ensembl chrNW_004624790:9,809,492...9,829,883
JBrowse link
G Gli3 GLI family zinc finger 3 involved_in ISO (MGI:3695957|PMID:15855276) BHF-UCL PMID:15855276 MGI:3695957 NCBI chrNW_004624740:18,961,395...19,238,760
Ensembl chrNW_004624740:18,975,596...19,235,900
JBrowse link
G Ihh Indian hedgehog signaling molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624823:5,959,329...5,965,584
Ensembl chrNW_004624823:5,959,448...5,964,769
JBrowse link
G Itpkb inositol-trisphosphate 3-kinase B acts_upstream_of_or_within ISO (MGI:3039326|PMID:15064401) MGI PMID:15064401 MGI:3039326 NCBI chrNW_004624807:658,334...741,018
Ensembl chrNW_004624807:658,231...741,195
JBrowse link
G LOC101716577 tyrosine-protein kinase ZAP-70 acts_upstream_of_or_within ISO (MGI:893249|PMID:9208839)
(MGI:75253|PMID:7630421)
(MGI:1096306|PMID:9275205)
MGI PMID:7630421 PMID:9208839 PMID:9275205 MGI:1096306 MGI:75253 MGI:893249 NCBI chrNW_004624749:2,893,601...2,901,256
Ensembl chrNW_004624749:2,893,601...2,901,035
JBrowse link
G Nkap NFKB activating protein involved_in ISO (PMID:19409814) UniProt PMID:19409814 NCBI chrNW_004624895:3,840,846...3,849,390 JBrowse link
G Pnp purine nucleoside phosphorylase acts_upstream_of_or_within ISO (PMID:16964310) MGI PMID:16964310 NCBI chrNW_004624825:4,688,662...4,699,912
Ensembl chrNW_004624825:4,690,831...4,700,717
JBrowse link
G Rhoa ras homolog family member A involved_in ISO (MGI:5640904|PMID:25398325) CACAO PMID:25398325 MGI:5640904 NCBI chrNW_004624730:3,316,122...3,361,820 JBrowse link
G Shh sonic hedgehog signaling molecule involved_in ISO (MGI:3029054|PMID:14764698) BHF-UCL PMID:14764698 MGI:3029054 NCBI chrNW_004624800:2,202,986...2,215,309
Ensembl chrNW_004624800:2,203,393...2,212,068
JBrowse link
G Syk spleen associated tyrosine kinase acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1096306|PMID:9275205) MGI
Ensembl
PMID:9275205 GO_REF:0000107 MGI:1096306 NCBI chrNW_004624868:1,654,079...1,738,648
Ensembl chrNW_004624868:1,653,997...1,701,391
JBrowse link
positive regulation of alpha-beta T cell proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Blm BLM RecQ like helicase acts_upstream_of_or_within ISO (MGI:3700903|PMID:17210642) MGI PMID:17210642 MGI:3700903 NCBI chrNW_004624768:17,422,267...17,522,894
Ensembl chrNW_004624768:17,421,291...17,522,799
JBrowse link
G Cd24 CD24 molecule acts_upstream_of_or_within ISO (MGI:3757622|PMID:7908303), (MGI:3757624|PMID:1385153)
(MGI:3757614|PMID:9368605), (MGI:3757626|PMID:1346270)
MGI PMID:1346270 PMID:1385153 PMID:7908303 PMID:9368605 MGI:3757614 MGI:3757622 MGI:3757624 MGI:3757626 NCBI chrNW_004624780:15,287,426...15,292,292
Ensembl chrNW_004624780:15,287,433...15,292,292
JBrowse link
G Cd80 CD80 molecule acts_upstream_of_or_within ISO (MGI:3757624|PMID:1385153) MGI PMID:1385153 MGI:3757624 NCBI chrNW_004624731:28,630,540...28,655,297
Ensembl chrNW_004624731:28,630,446...28,651,994
JBrowse link
G LOC101716577 tyrosine-protein kinase ZAP-70 acts_upstream_of_or_within ISO (MGI:1096306|PMID:9275205) MGI PMID:9275205 MGI:1096306 NCBI chrNW_004624749:2,893,601...2,901,256
Ensembl chrNW_004624749:2,893,601...2,901,035
JBrowse link
G Ptprc protein tyrosine phosphatase receptor type C acts_upstream_of_or_within ISO (MGI:73253|PMID:7751624) MGI PMID:7751624 MGI:73253 NCBI chrNW_004624798:1,700,732...1,814,603
Ensembl chrNW_004624798:1,699,541...1,814,656
JBrowse link
G Syk spleen associated tyrosine kinase acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1096306|PMID:9275205) MGI
TreeGrafter
Ensembl
PMID:9275205 GO_REF:0000107 GO_REF:0000118 MGI:1096306 NCBI chrNW_004624868:1,654,079...1,738,648
Ensembl chrNW_004624868:1,653,997...1,701,391
JBrowse link
G Tnfsf4 TNF superfamily member 4 involved_in ISO (MGI:3772919|PMID:16670306) BHF-UCL PMID:16670306 MGI:3772919 NCBI chrNW_004624771:8,580,489...8,599,735 JBrowse link
positive regulation of CD4-positive, alpha-beta T cell activation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd55 CD55 molecule (Cromer blood group) involved_in ISO (PMID:16818763) UniProt PMID:16818763 NCBI chrNW_004624807:4,252,676...4,274,828 JBrowse link
G LOC101706353 HLA class II histocompatibility antigen, DR alpha chain involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624754:24,079,459...24,086,342
Ensembl chrNW_004624754:24,079,366...24,084,512
JBrowse link
positive regulation of CD4-positive, alpha-beta T cell costimulation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tnfsf4 TNF superfamily member 4 involved_in ISO (MGI:4819294|PMID:20639485) BHF-UCL PMID:20639485 MGI:4819294 NCBI chrNW_004624771:8,580,489...8,599,735 JBrowse link
positive regulation of CD4-positive, alpha-beta T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd83 CD83 molecule acts_upstream_of_or_within ISO (MGI:3054335|PMID:15322158) MGI PMID:15322158 MGI:3054335 NCBI chrNW_004624756:12,212,921...12,229,974
Ensembl chrNW_004624756:12,210,892...12,229,749
JBrowse link
G Foxp3 forkhead box P3 acts_upstream_of_or_within ISO (MGI:3697020|PMID:17028180) MGI PMID:17028180 MGI:3697020 NCBI chrNW_004624893:995,145...1,008,492
Ensembl chrNW_004624893:995,182...1,008,679
JBrowse link
G Nckap1l NCK associated protein 1 like involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624904:2,508,576...2,575,505
Ensembl chrNW_004624904:2,508,799...2,578,609
JBrowse link
G Sash3 SAM and SH3 domain containing 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3607020|PMID:16227612) MGI
Ensembl
PMID:16227612 GO_REF:0000107 MGI:3607020 NCBI chrNW_004624797:9,001,846...9,017,441
Ensembl chrNW_004624797:9,001,795...9,018,027
JBrowse link
G Socs1 suppressor of cytokine signaling 1 involved_in ISO (MGI:6140589|PMID:24880459) UniProt PMID:24880459 MGI:6140589 NCBI chrNW_004624824:8,444,877...8,446,628 JBrowse link
G Tnfsf4 TNF superfamily member 4 involved_in ISO (MGI:4819294|PMID:20639485) BHF-UCL PMID:20639485 MGI:4819294 NCBI chrNW_004624771:8,580,489...8,599,735 JBrowse link
G Zbtb7b zinc finger and BTB domain containing 7B involved_in ISO (MGI:6140589|PMID:24880459) UniProt PMID:24880459 MGI:6140589 NCBI chrNW_004624885:2,474,427...2,489,024
Ensembl chrNW_004624885:2,475,727...2,489,030
JBrowse link
positive regulation of CD4-positive, alpha-beta T cell proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Card11 caspase recruitment domain family member 11 acts_upstream_of_or_within ISO (MGI:3039643|PMID:12867038) MGI PMID:12867038 MGI:3039643 NCBI chrNW_004624740:29,974,707...30,085,498
Ensembl chrNW_004624740:29,974,689...30,085,981
JBrowse link
G Cd24 CD24 molecule acts_upstream_of_or_within ISO (MGI:65397|PMID:8125140)
(MGI:3510282|PMID:15314074)
MGI PMID:8125140 PMID:15314074 MGI:3510282 MGI:65397 NCBI chrNW_004624780:15,287,426...15,292,292
Ensembl chrNW_004624780:15,287,433...15,292,292
JBrowse link
G Cd28 CD28 molecule acts_upstream_of_or_within ISO (MGI:3757614|PMID:9368605)
(MGI:3038342|PMID:14973438), (MGI:3757614|PMID:9368605), (MGI:65397|PMID:8125140)
MGI PMID:8125140 PMID:9368605 PMID:14973438 MGI:3038342 MGI:3757614 MGI:65397 NCBI chrNW_004624765:12,650,092...12,667,168 JBrowse link
G Cd3e CD3e molecule acts_upstream_of_or_within ISO (MGI:2176424|PMID:11894097), (MGI:3038342|PMID:14973438), (MGI:65397|PMID:8125140) MGI PMID:8125140 PMID:11894097 PMID:14973438 MGI:2176424 MGI:3038342 MGI:65397 NCBI chrNW_004624784:13,714,667...13,726,881
Ensembl chrNW_004624784:13,712,920...13,726,950
JBrowse link
G Cd55 CD55 molecule (Cromer blood group) involved_in ISO (PMID:16818763) UniProt PMID:16818763 NCBI chrNW_004624807:4,252,676...4,274,828 JBrowse link
G Cd81 CD81 molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624767:15,192,446...15,210,923
Ensembl chrNW_004624767:15,192,452...15,210,922
JBrowse link
G Irgm immunity related GTPase M involved_in ISO (MGI:3822251|PMID:18806793) UniProt PMID:18806793 MGI:3822251 NCBI chrNW_004624733:41,241,488...41,248,162 JBrowse link
G Lgals9 galectin 9 involved_in ISO (PMID:16116184) UniProt PMID:16116184 NCBI chrNW_004624786:478,048...491,086 JBrowse link
G Prkcq protein kinase C theta acts_upstream_of_or_within ISO (MGI:3039643|PMID:12867038) MGI PMID:12867038 MGI:3039643 NCBI chrNW_004624775:1,419,596...1,543,805
Ensembl chrNW_004624775:1,419,509...1,502,064
JBrowse link
G Ripk2 receptor interacting serine/threonine kinase 2 acts_upstream_of_or_within ISO (MGI:2176424|PMID:11894097)
(MGI:2176422|PMID:11894098)
MGI PMID:11894097 PMID:11894098 MGI:2176422 MGI:2176424 NCBI chrNW_004624744:2,194,339...2,227,498
Ensembl chrNW_004624744:2,201,319...2,226,890
JBrowse link
G Tgfbr2 transforming growth factor beta receptor 2 involved_in ISO (PMID:17164348) BHF-UCL PMID:17164348 NCBI chrNW_004624788:8,447,679...8,535,821
Ensembl chrNW_004624788:8,447,542...8,535,959
JBrowse link
positive regulation of CD4-positive, CD25-positive, alpha-beta regulatory T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxp3 forkhead box P3 acts_upstream_of_or_within ISO (MGI:3700459|PMID:16301745), (MGI:3799419|PMID:18573908)
(MGI:2653673|PMID:12612578)
(MGI:3695768|PMID:16275384)
MGI PMID:12612578 PMID:16275384 PMID:16301745 PMID:18573908 MGI:2653673 MGI:3695768 MGI:3700459 MGI:3799419 NCBI chrNW_004624893:995,145...1,008,492
Ensembl chrNW_004624893:995,182...1,008,679
JBrowse link
G Il2rg interleukin 2 receptor subunit gamma acts_upstream_of_or_within ISO (MGI:3662823|PMID:16227984) MGI PMID:16227984 MGI:3662823 NCBI chrNW_004624903:1,402,586...1,406,554
Ensembl chrNW_004624903:1,402,481...1,406,600
JBrowse link
G Klhl25 kelch like family member 25 involved_in ISO (PMID:34491895)
(MGI:6765767|PMID:34491895)
UniProt PMID:34491895 MGI:6765767 NCBI chrNW_004624768:13,112,589...13,134,855
Ensembl chrNW_004624768:13,110,912...13,121,206
JBrowse link
G LOC101706353 HLA class II histocompatibility antigen, DR alpha chain involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624754:24,079,459...24,086,342
Ensembl chrNW_004624754:24,079,366...24,084,512
JBrowse link
positive regulation of CD4-positive, CD25-positive, alpha-beta regulatory T cell differentiation involved in immune response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ifng interferon gamma involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624802:163,261...166,534
Ensembl chrNW_004624802:163,261...166,534
JBrowse link
G Lgals9 galectin 9 involved_in ISO (PMID:20209097) UniProt PMID:20209097 NCBI chrNW_004624786:478,048...491,086 JBrowse link
positive regulation of CD8-positive, alpha-beta T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cbfb core-binding factor subunit beta involved_in ISO (MGI:3772948|PMID:18258917) UniProt PMID:18258917 MGI:3772948 NCBI chrNW_004624746:19,204,415...19,264,217
Ensembl chrNW_004624746:19,204,392...19,264,194
JBrowse link
G Nckap1l NCK associated protein 1 like involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624904:2,508,576...2,575,505
Ensembl chrNW_004624904:2,508,799...2,578,609
JBrowse link
G Runx3 RUNX family transcription factor 3 involved_in ISO (MGI:3772948|PMID:18258917) UniProt PMID:18258917 MGI:3772948 NCBI chrNW_004624764:9,192,067...9,218,617
Ensembl chrNW_004624764:9,191,556...9,248,252
JBrowse link
positive regulation of CD8-positive, alpha-beta T cell proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd244 CD244 molecule involved_in ISO (MGI:5700312|PMID:11739483) UniProt PMID:11739483 MGI:5700312 NCBI chrNW_004624794:447,572...472,700
Ensembl chrNW_004624794:447,584...472,778
JBrowse link
G Ptpn22 protein tyrosine phosphatase non-receptor type 22 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624772:9,472,869...9,552,751
Ensembl chrNW_004624772:9,472,913...9,550,990
JBrowse link
positive regulation of cytotoxic T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sart1 spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP involved_in ISO (PMID:10209962) UniProt PMID:10209962 NCBI chrNW_004624767:20,456,951...20,466,994
Ensembl chrNW_004624767:20,456,890...20,467,641
JBrowse link
G Tnfsf9 TNF superfamily member 9 ISO RGD PMID:19187795 RGD:2317344 NCBI chrNW_004624828:3,615,860...3,623,377 JBrowse link
positive regulation of establishment of T cell polarity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abl1 ABL proto-oncogene 1, non-receptor tyrosine kinase involved_in ISO (MGI:6142789|PMID:22810897) UniProt PMID:22810897 MGI:6142789 NCBI chrNW_004624760:4,878,811...5,032,719
Ensembl chrNW_004624760:4,878,556...5,031,491
JBrowse link
G Abl2 ABL proto-oncogene 2, non-receptor tyrosine kinase involved_in ISO (MGI:6142789|PMID:22810897) UniProt PMID:22810897 MGI:6142789 NCBI chrNW_004624771:3,160,528...3,280,860
Ensembl chrNW_004624771:3,160,224...3,278,787
JBrowse link
G Dock8 dedicator of cytokinesis 8 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624736:4,959,482...5,195,182
Ensembl chrNW_004624736:4,959,634...5,193,928
JBrowse link
G Flot2 flotillin 2 involved_in ISO (PMID:21696602) UniProt PMID:21696602 NCBI chrNW_004624786:1,449,001...1,465,208
Ensembl chrNW_004624786:1,450,234...1,465,102
JBrowse link
positive regulation of gamma-delta T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lck LCK proto-oncogene, Src family tyrosine kinase acts_upstream_of_or_within ISO (MGI:70338|PMID:7807014) MGI PMID:7807014 MGI:70338 NCBI chrNW_004624764:15,469,582...15,495,351
Ensembl chrNW_004624764:15,472,685...15,495,351
JBrowse link
G Lef1 lymphoid enhancer binding factor 1 involved_in ISO (MGI:5486619|PMID:23562159) UniProt PMID:23562159 MGI:5486619 NCBI chrNW_004624830:1,320,034...1,422,774
Ensembl chrNW_004624830:1,321,387...1,424,389
JBrowse link
G Nckap1l NCK associated protein 1 like involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624904:2,508,576...2,575,505
Ensembl chrNW_004624904:2,508,799...2,578,609
JBrowse link
G Ptprc protein tyrosine phosphatase receptor type C acts_upstream_of_or_within ISO (MGI:70338|PMID:7807014) MGI PMID:7807014 MGI:70338 NCBI chrNW_004624798:1,700,732...1,814,603
Ensembl chrNW_004624798:1,699,541...1,814,656
JBrowse link
G Sox13 SRY-box transcription factor 13 involved_in ISO (MGI:5486619|PMID:23562159) UniProt PMID:23562159 MGI:5486619 NCBI chrNW_004624807:6,848,218...6,887,666
Ensembl chrNW_004624807:6,848,218...6,888,467
JBrowse link
G Sox4 SRY-box transcription factor 4 involved_in ISO (MGI:5486619|PMID:23562159) UniProt PMID:23562159 MGI:5486619 NCBI chrNW_004624756:5,128,848...5,156,174 JBrowse link
G Syk spleen associated tyrosine kinase acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:83585|PMID:8790395)
(MGI:77314|PMID:7477352)
MGI
Ensembl
PMID:7477352 PMID:8790395 GO_REF:0000107 MGI:77314 MGI:83585 NCBI chrNW_004624868:1,654,079...1,738,648
Ensembl chrNW_004624868:1,653,997...1,701,391
JBrowse link
positive regulation of immature T cell proliferation in thymus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Blm BLM RecQ like helicase acts_upstream_of_or_within ISO (MGI:3700903|PMID:17210642) MGI PMID:17210642 MGI:3700903 NCBI chrNW_004624768:17,422,267...17,522,894
Ensembl chrNW_004624768:17,421,291...17,522,799
JBrowse link
G Bmi1 BMI1 proto-oncogene, polycomb ring finger involved_in ISO (MGI:3615850|PMID:15964995) HGNC-UCL PMID:15964995 MGI:3615850 NCBI chrNW_004624796:6,277,201...6,282,830
Ensembl chrNW_004624796:6,274,561...6,282,984
JBrowse link
G Foxp3 forkhead box P3 acts_upstream_of_or_within ISO (MGI:3695084|PMID:16230479) MGI PMID:16230479 MGI:3695084 NCBI chrNW_004624893:995,145...1,008,492
Ensembl chrNW_004624893:995,182...1,008,679
JBrowse link
G Il1a interleukin 1 alpha involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624749:12,795,967...12,805,658
Ensembl chrNW_004624749:12,795,946...12,805,154
JBrowse link
G Il1b interleukin 1 beta involved_in ISO
IEA
RGD
TreeGrafter
PMID:8590311 GO_REF:0000118 RGD:7401228 NCBI chrNW_004624749:12,852,128...12,858,478
Ensembl chrNW_004624749:12,852,021...12,858,760
JBrowse link
G Ripk2 receptor interacting serine/threonine kinase 2 acts_upstream_of_or_within ISO (MGI:2176422|PMID:11894098) MGI PMID:11894098 MGI:2176422 NCBI chrNW_004624744:2,194,339...2,227,498
Ensembl chrNW_004624744:2,201,319...2,226,890
JBrowse link
G Shh sonic hedgehog signaling molecule involved_in ISO (MGI:3029054|PMID:14764698), (MGI:3847177|PMID:19273836) BHF-UCL PMID:14764698 PMID:19273836 MGI:3029054 MGI:3847177 NCBI chrNW_004624800:2,202,986...2,215,309
Ensembl chrNW_004624800:2,203,393...2,212,068
JBrowse link
positive regulation of memory T cell activation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cyrib CYFIP related Rac1 interactor B involved_in ISO (MGI:5432330|PMID:22522492) UniProt PMID:22522492 MGI:5432330 NCBI chrNW_004624735:25,752,675...25,894,193
Ensembl chrNW_004624735:25,820,175...25,894,193
JBrowse link
G Tnfsf4 TNF superfamily member 4 involved_in ISO (MGI:3763508|PMID:12496423) BHF-UCL PMID:12496423 MGI:3763508 NCBI chrNW_004624771:8,580,489...8,599,735 JBrowse link
positive regulation of memory T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd46 CD46 molecule involved_in ISO (PMID:12540904) UniProt PMID:12540904 NCBI chrNW_004624807:4,040,639...4,074,631 JBrowse link
G Il23a interleukin 23 subunit alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624802:11,662,851...11,664,444
Ensembl chrNW_004624802:11,662,753...11,665,418
JBrowse link
G LOC101706353 HLA class II histocompatibility antigen, DR alpha chain involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624754:24,079,459...24,086,342
Ensembl chrNW_004624754:24,079,366...24,084,512
JBrowse link
G Pck1 phosphoenolpyruvate carboxykinase 1 involved_in ISO (MGI:6119963|PMID:29230018) UniProt PMID:29230018 MGI:6119963 NCBI chrNW_004624741:23,985,257...23,990,354
Ensembl chrNW_004624741:23,985,675...23,989,790
JBrowse link
G Tnfsf4 TNF superfamily member 4 involved_in ISO (MGI:3806904|PMID:18713990) BHF-UCL PMID:18713990 MGI:3806904 NCBI chrNW_004624771:8,580,489...8,599,735 JBrowse link
positive regulation of NK T cell activation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Il12a interleukin 12A involved_in ISO (PMID:19088061) BHF-UCL PMID:19088061 NCBI chrNW_004624730:37,787,772...37,794,871
Ensembl chrNW_004624730:37,787,909...37,794,940
JBrowse link
G Il12b interleukin 12B involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624733:30,146,050...30,156,144
Ensembl chrNW_004624733:30,146,050...30,154,589
JBrowse link
G Il23a interleukin 23 subunit alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624802:11,662,851...11,664,444
Ensembl chrNW_004624802:11,662,753...11,665,418
JBrowse link
positive regulation of NK T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ap3b1 adaptor related protein complex 3 subunit beta 1 acts_upstream_of_or_within ISO (MGI:2679144|PMID:14557411) MGI PMID:14557411 MGI:2679144 NCBI chrNW_004624869:2,459,370...2,741,529
Ensembl chrNW_004624869:2,459,947...2,741,328
JBrowse link
G Ap3d1 adaptor related protein complex 3 subunit delta 1 acts_upstream_of_or_within ISO (MGI:2679144|PMID:14557411) MGI PMID:14557411 MGI:2679144 NCBI chrNW_004624828:6,710,081...6,750,315
Ensembl chrNW_004624828:6,710,025...6,749,434
JBrowse link
G Ikzf1 IKAROS family zinc finger 1 acts_upstream_of_or_within ISO (MGI:1340364|PMID:10366784) MGI PMID:10366784 MGI:1340364 NCBI chrNW_004624740:3,785,342...3,875,892
Ensembl chrNW_004624740:3,785,209...3,875,841
JBrowse link
G Tgfbr2 transforming growth factor beta receptor 2 acts_upstream_of_or_within ISO (MGI:3686949|PMID:16973387) MGI PMID:16973387 MGI:3686949 NCBI chrNW_004624788:8,447,679...8,535,821
Ensembl chrNW_004624788:8,447,542...8,535,959
JBrowse link
G Zbtb16 zinc finger and BTB domain containing 16 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624784:9,545,529...9,726,960
Ensembl chrNW_004624784:9,546,509...9,726,960
JBrowse link
positive regulation of NK T cell proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Il12b interleukin 12B involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624733:30,146,050...30,156,144
Ensembl chrNW_004624733:30,146,050...30,154,589
JBrowse link
G Il18 interleukin 18 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624784:7,294,286...7,312,959
Ensembl chrNW_004624784:7,294,183...7,304,687
JBrowse link
G Il23a interleukin 23 subunit alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624802:11,662,851...11,664,444
Ensembl chrNW_004624802:11,662,753...11,665,418
JBrowse link
G Jak2 Janus kinase 2 involved_in ISO (PMID:19088061) ComplexPortal PMID:19088061 NCBI chrNW_004624736:9,724,876...9,827,364
Ensembl chrNW_004624736:9,724,369...9,830,365
JBrowse link
G Rasal3 RAS protein activator like 3 involved_in ISO (PMID:25652366) UniProt PMID:25652366 NCBI chrNW_004624901:2,538,131...2,550,540
Ensembl chrNW_004624901:2,538,550...2,550,327
JBrowse link
G Tyk2 tyrosine kinase 2 involved_in ISO (PMID:19088061) ComplexPortal PMID:19088061 NCBI chrNW_004624828:2,499,811...2,518,817
Ensembl chrNW_004624828:2,500,339...2,517,694
JBrowse link
positive regulation of pro-T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Zbtb1 zinc finger and BTB domain containing 1 involved_in ISO (MGI:5446979|PMID:22753936) UniProt PMID:22753936 MGI:5446979 NCBI chrNW_004624734:36,479,670...36,509,655 JBrowse link
positive regulation of regulatory T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ambra1 autophagy and beclin 1 regulator 1 involved_in ISO (PMID:30513302)
(MGI:6284097|PMID:30513302)
UniProt PMID:30513302 MGI:6284097 NCBI chrNW_004624767:1,967,002...2,160,102
Ensembl chrNW_004624767:1,966,898...2,160,465
JBrowse link
G Bcl6 BCL6 transcription repressor involved_in ISO (PMID:20935202), (PMID:22387553) BHF-UCL PMID:20935202 PMID:22387553 NCBI chrNW_004624730:69,145,035...69,167,583
Ensembl chrNW_004624730:69,154,080...69,167,689
JBrowse link
G Carmil2 capping protein regulator and myosin 1 linker 2 acts_upstream_of_or_within ISO (MGI:5544872|PMID:23793062) MGI PMID:23793062 MGI:5544872 NCBI chrNW_004624746:18,692,179...18,704,952
Ensembl chrNW_004624746:18,692,225...18,704,476
JBrowse link
G Cd46 CD46 molecule involved_in ISO (PMID:12540904) UniProt PMID:12540904 NCBI chrNW_004624807:4,040,639...4,074,631 JBrowse link
G Dusp10 dual specificity phosphatase 10 involved_in ISO (PMID:22387553) BHF-UCL PMID:22387553 NCBI chrNW_004624835:4,751,651...4,783,916
Ensembl chrNW_004624835:4,750,077...4,782,249
JBrowse link
G Foxo3 forkhead box O3 involved_in ISO (PMID:30513302) UniProt PMID:30513302 NCBI chrNW_004624780:13,621,733...13,740,399
Ensembl chrNW_004624780:13,622,948...13,740,374
JBrowse link
G Foxp3 forkhead box P3 acts_upstream_of_or_within
involved_in
ISO (MGI:3574163|PMID:15780990)
(PMID:30513302)
(MGI:2450778|PMID:12522256), (MGI:3041050|PMID:15100250), (MGI:3693968|PMID:16769892), (MGI:3697020|PMID:17028180)
MGI
UniProt
PMID:12522256 PMID:15100250 PMID:15780990 PMID:16769892 PMID:17028180 More... MGI:2450778 MGI:3041050 MGI:3574163 MGI:3693968 MGI:3697020 NCBI chrNW_004624893:995,145...1,008,492
Ensembl chrNW_004624893:995,182...1,008,679
JBrowse link
G Il2 interleukin 2 ISO RGD PMID:6233372 RGD:1600097 NCBI chrNW_004624777:2,885,537...2,890,453
Ensembl chrNW_004624777:2,885,535...2,890,453
JBrowse link
G Il4i1 interleukin 4 induced 1 involved_in ISO (MGI:5753024|PMID:25778793)
(PMID:25778793)
UniProt PMID:25778793 MGI:5753024 NCBI chrNW_004624832:4,404,818...4,444,551
Ensembl chrNW_004624832:4,431,903...4,444,651
JBrowse link
G Kat5 lysine acetyltransferase 5 involved_in ISO (PMID:24835996)
(MGI:5576410|PMID:24835996)
UniProt PMID:24835996 MGI:5576410 NCBI chrNW_004624767:20,668,759...20,675,367
Ensembl chrNW_004624767:20,666,763...20,675,164
JBrowse link
G Lgals9 galectin 9 involved_in ISO (MGI:5688819|PMID:25065622) UniProt PMID:25065622 MGI:5688819 NCBI chrNW_004624786:478,048...491,086 JBrowse link
G Socs1 suppressor of cytokine signaling 1 involved_in ISO (PMID:22387553) BHF-UCL PMID:22387553 NCBI chrNW_004624824:8,444,877...8,446,628 JBrowse link
G Sox12 SRY-box transcription factor 12 involved_in ISO (MGI:6203502|PMID:30190287) UniProt PMID:30190287 MGI:6203502 NCBI chrNW_004624741:1,428,233...1,432,372
Ensembl chrNW_004624741:1,428,241...1,431,025
JBrowse link
G Tgfb1 transforming growth factor beta 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624907:162,567...175,696
Ensembl chrNW_004624907:161,569...176,605
JBrowse link
G Vsir V-set immunoregulatory receptor involved_in ISO (PMID:24691993) UniProt PMID:24691993 NCBI chrNW_004624754:5,664,899...5,686,675
Ensembl chrNW_004624754:5,665,445...5,686,692
JBrowse link
positive regulation of T cell activation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ada adenosine deaminase acts_upstream_of_or_within ISO (MGI:1860411|PMID:10845921), (MGI:3640996|PMID:11435465) MGI PMID:10845921 PMID:11435465 MGI:1860411 MGI:3640996 NCBI chrNW_004624790:9,809,550...9,829,199
Ensembl chrNW_004624790:9,809,492...9,829,883
JBrowse link
G Bcl10 BCL10 immune signaling adaptor acts_upstream_of_or_within ISO (MGI:3629264|PMID:14614861) MGI PMID:14614861 MGI:3629264 NCBI chrNW_004624742:12,210,333...12,222,533
Ensembl chrNW_004624742:12,210,360...12,221,759
JBrowse link
G Card11 caspase recruitment domain family member 11 acts_upstream_of_or_within ISO (MGI:3039643|PMID:12867038) MGI PMID:12867038 MGI:3039643 NCBI chrNW_004624740:29,974,707...30,085,498
Ensembl chrNW_004624740:29,974,689...30,085,981
JBrowse link
G Ccdc88b coiled-coil domain containing 88B involved_in ISO (MGI:5763360|PMID:25403443) UniProt PMID:25403443 MGI:5763360 NCBI chrNW_004624767:21,973,147...21,987,317 JBrowse link
G Cd3e CD3e molecule acts_upstream_of_or_within ISO (MGI:3822044|PMID:12874832) MGI PMID:12874832 MGI:3822044 NCBI chrNW_004624784:13,714,667...13,726,881
Ensembl chrNW_004624784:13,712,920...13,726,950
JBrowse link
G Cd4 CD4 molecule acts_upstream_of_or_within ISO (MGI:2429474|PMID:12421911) MGI PMID:12421911 MGI:2429474 NCBI chrNW_004624860:3,470,886...3,492,247
Ensembl chrNW_004624860:3,470,631...3,492,846
JBrowse link
G Coro1a coronin 1A acts_upstream_of_or_within ISO (MGI:3773559|PMID:18199416) MGI PMID:18199416 MGI:3773559 NCBI chrNW_004624782:13,106,416...13,111,394
Ensembl chrNW_004624782:13,105,153...13,111,357
JBrowse link
G Cyrib CYFIP related Rac1 interactor B involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624735:25,752,675...25,894,193
Ensembl chrNW_004624735:25,820,175...25,894,193
JBrowse link
G Fcho1 FCH and mu domain containing endocytic adaptor 1 involved_in ISO (PMID:32098969) UniProt PMID:32098969 NCBI chrNW_004624908:1,327,569...1,340,741
Ensembl chrNW_004624908:1,327,602...1,340,240
JBrowse link
G Hspd1 heat shock protein family D (Hsp60) member 1 involved_in ISO (MGI:3708392|PMID:17164250)
(PMID:16148103), (PMID:17164250)
BHF-UCL PMID:16148103 PMID:17164250 MGI:3708392 NCBI chrNW_004624889:2,736,727...2,746,333 JBrowse link
G Lck LCK proto-oncogene, Src family tyrosine kinase involved_in ISO (PMID:8943371) UniProt PMID:8943371 NCBI chrNW_004624764:15,469,582...15,495,351
Ensembl chrNW_004624764:15,472,685...15,495,351
JBrowse link
G LOC101697345 HLA class II histocompatibility antigen, DP beta 1 chain involved_in ISO (PMID:20356827) UniProt PMID:20356827 NCBI chrNW_004624754:23,661,031...23,672,549
Ensembl chrNW_004624754:23,658,339...23,672,663
JBrowse link
G LOC101698463 HLA class II histocompatibility antigen, DP alpha 1 chain involved_in ISO (PMID:20356827) UniProt PMID:20356827 NCBI chrNW_004624754:23,674,935...23,683,044
Ensembl chrNW_004624754:23,674,448...23,683,662
JBrowse link
G Malt1 MALT1 paracaspase acts_upstream_of_or_within ISO (MGI:3629264|PMID:14614861) MGI PMID:14614861 MGI:3629264 NCBI chrNW_004624792:4,148,258...4,223,431
Ensembl chrNW_004624792:4,148,453...4,217,548
JBrowse link
G Prkcq protein kinase C theta acts_upstream_of_or_within
involved_in
ISO (MGI:3039643|PMID:12867038)
(MGI:2663371|PMID:12782715)
MGI
UniProt
PMID:12782715 PMID:12867038 MGI:2663371 MGI:3039643 NCBI chrNW_004624775:1,419,596...1,543,805
Ensembl chrNW_004624775:1,419,509...1,502,064
JBrowse link
G Pycard PYD and CARD domain containing involved_in ISO (PMID:22732093) UniProt PMID:22732093 NCBI chrNW_004624782:14,247,333...14,249,861
Ensembl chrNW_004624782:14,247,864...14,249,000
JBrowse link
G Sirpa signal regulatory protein alpha involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624741:3,157,734...3,202,018 JBrowse link
G Thy1 Thy-1 cell surface antigen involved_in ISO PMID:7722293 UniProt PMID:7722293 RGD:8553490 NCBI chrNW_004624784:14,779,533...14,784,315
Ensembl chrNW_004624784:14,780,698...14,784,897
JBrowse link
G Tnfsf11 TNF superfamily member 11 involved_in ISO (PMID:9367155) BHF-UCL PMID:9367155 NCBI chrNW_004624748:12,527,221...12,555,551
Ensembl chrNW_004624748:12,527,478...12,555,405
JBrowse link
positive regulation of T cell activation via T cell receptor contact with antigen bound to MHC molecule on antigen presenting cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd81 CD81 molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624767:15,192,446...15,210,923
Ensembl chrNW_004624767:15,192,452...15,210,922
JBrowse link
G Lgals9 galectin 9 involved_in ISO (PMID:16116184) UniProt PMID:16116184 NCBI chrNW_004624786:478,048...491,086 JBrowse link
G LOC101701356 HLA class II histocompatibility antigen, DM beta chain involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624754:23,774,013...23,779,851
Ensembl chrNW_004624754:23,773,934...23,779,952
JBrowse link
positive regulation of T cell costimulation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccr7 C-C motif chemokine receptor 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624795:2,777,766...2,787,664
Ensembl chrNW_004624795:2,779,627...2,788,897
JBrowse link
G Ephb4 EPH receptor B4 acts_upstream_of_or_within ISO (MGI:3513714|PMID:15599401) MGI PMID:15599401 MGI:3513714 NCBI chrNW_004624740:16,320,672...16,339,454
Ensembl chrNW_004624740:16,320,697...16,339,777
JBrowse link
G Ephb6 EPH receptor B6 acts_upstream_of_or_within ISO (MGI:3513714|PMID:15599401) MGI PMID:15599401 MGI:3513714 NCBI chrNW_004624800:12,069,977...12,076,992
Ensembl chrNW_004624800:12,069,908...12,074,669
JBrowse link
G Tnfsf4 TNF superfamily member 4 involved_in ISO (MGI:4819294|PMID:20639485) BHF-UCL PMID:20639485 MGI:4819294 NCBI chrNW_004624771:8,580,489...8,599,735 JBrowse link
positive regulation of T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ada adenosine deaminase acts_upstream_of_or_within ISO (MGI:2155238|PMID:9478961)
(MGI:72798|PMID:7731963)
MGI PMID:7731963 PMID:9478961 MGI:2155238 MGI:72798 NCBI chrNW_004624790:9,809,550...9,829,199
Ensembl chrNW_004624790:9,809,492...9,829,883
JBrowse link
G Bad BCL2 associated agonist of cell death acts_upstream_of_or_within ISO (MGI:3029504|PMID:12431371) MGI PMID:12431371 MGI:3029504 NCBI chrNW_004624767:22,025,721...22,037,283
Ensembl chrNW_004624767:22,026,133...22,037,277
JBrowse link
G Cd74 CD74 molecule acts_upstream_of_or_within ISO (MGI:3033881|PMID:9432982)
(MGI:52620|PMID:7679955), (MGI:79110|PMID:8598040)
MGI PMID:7679955 PMID:8598040 PMID:9432982 MGI:3033881 MGI:52620 MGI:79110 NCBI chrNW_004624774:9,699,876...9,708,871
Ensembl chrNW_004624774:9,700,393...9,709,514
JBrowse link
G Cyld CYLD lysine 63 deubiquitinase acts_upstream_of_or_within ISO (MGI:3656194|PMID:16501569) MGI PMID:16501569 MGI:3656194 NCBI chrNW_004624757:5,895,912...5,953,485 JBrowse link
G Gata3 GATA binding protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624775:2,985,077...3,014,567
Ensembl chrNW_004624775:2,994,164...3,015,392
JBrowse link
G Il12a interleukin 12A acts_upstream_of_or_within ISO (MGI:5461742|PMID:22968459) MGI PMID:22968459 MGI:5461742 NCBI chrNW_004624730:37,787,772...37,794,871
Ensembl chrNW_004624730:37,787,909...37,794,940
JBrowse link
G Il1rl2 interleukin 1 receptor like 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5461742|PMID:22968459) MGI
Ensembl
PMID:22968459 GO_REF:0000107 MGI:5461742 NCBI chrNW_004624749:6,747,131...6,781,908
Ensembl chrNW_004624749:6,749,007...6,779,753
JBrowse link
G Il2 interleukin 2 ISO RGD PMID:9352365 RGD:1600138 NCBI chrNW_004624777:2,885,537...2,890,453
Ensembl chrNW_004624777:2,885,535...2,890,453
JBrowse link
G Il2ra interleukin 2 receptor subunit alpha ISO RGD PMID:9352365 RGD:1600138 NCBI chrNW_004624775:927,337...991,062
Ensembl chrNW_004624775:924,648...942,354
JBrowse link
G Il36b interleukin 36 beta acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5461742|PMID:22968459) MGI
TreeGrafter
PMID:22968459 GO_REF:0000118 MGI:5461742 NCBI chrNW_004624749:13,107,596...13,128,883 JBrowse link
G Il4 interleukin 4 involved_in ISO (PMID:20554961) UniProt PMID:20554961 NCBI chrNW_004624733:39,412,800...39,420,079 JBrowse link
G Il7 interleukin 7 acts_upstream_of_or_within ISO (MGI:3029504|PMID:12431371) MGI PMID:12431371 MGI:3029504 NCBI chrNW_004624744:12,562,536...12,604,037
Ensembl chrNW_004624744:12,567,661...12,604,074
JBrowse link
G LOC101700274 HLA class II histocompatibility antigen, DM alpha chain acts_upstream_of_or_within ISO (MGI:79272|PMID:8638109)
(MGI:3033881|PMID:9432982), (MGI:79111|PMID:8598041)
(MGI:79110|PMID:8598040)
MGI PMID:8598040 PMID:8598041 PMID:8638109 PMID:9432982 MGI:3033881 MGI:79110 MGI:79111 MGI:79272 NCBI chrNW_004624754:23,752,352...23,765,319
Ensembl chrNW_004624754:23,762,051...23,765,593
JBrowse link
G LOC101716577 tyrosine-protein kinase ZAP-70 acts_upstream_of_or_within ISO (PMID:7630421)
(MGI:893249|PMID:9208839)
MGI PMID:7630421 PMID:9208839 MGI:893249 NCBI chrNW_004624749:2,893,601...2,901,256
Ensembl chrNW_004624749:2,893,601...2,901,035
JBrowse link
G Mdk midkine involved_in ISO (MGI:5897914|PMID:28183532) UniProt PMID:28183532 MGI:5897914 NCBI chrNW_004624767:2,171,096...2,173,436
Ensembl chrNW_004624767:2,171,096...2,173,512
JBrowse link
G Pik3r6 phosphoinositide-3-kinase regulatory subunit 6 involved_in ISO (MGI:3641361|PMID:12707323) CACAO PMID:12707323 MGI:3641361 NCBI chrNW_004624786:11,324,558...11,386,202
Ensembl chrNW_004624786:11,326,364...11,371,767
JBrowse link
G Ptprc protein tyrosine phosphatase receptor type C acts_upstream_of_or_within ISO (MGI:80946|PMID:8666928) MGI PMID:8666928 MGI:80946 NCBI chrNW_004624798:1,700,732...1,814,603
Ensembl chrNW_004624798:1,699,541...1,814,656
JBrowse link
G Rag1 recombination activating 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624767:10,694,867...10,698,041
Ensembl chrNW_004624767:10,694,867...10,698,001
JBrowse link
G Rhoh ras homolog family member H involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624761:26,717,857...26,721,628
Ensembl chrNW_004624761:26,720,478...26,721,053
JBrowse link
G Wnt10b Wnt family member 10B acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4358631|PMID:19723499) MGI
Ensembl
PMID:19723499 GO_REF:0000107 MGI:4358631 NCBI chrNW_004624816:3,221,573...3,227,102
Ensembl chrNW_004624816:3,210,828...3,227,096
JBrowse link
G Xbp1 X-box binding protein 1 involved_in ISO (PMID:11460154) UniProt PMID:11460154 NCBI chrNW_004624747:5,123,085...5,128,465 JBrowse link
G Zbtb1 zinc finger and BTB domain containing 1 involved_in ISO (MGI:5300225|PMID:22201126) UniProt PMID:22201126 MGI:5300225 NCBI chrNW_004624734:36,479,670...36,509,655 JBrowse link
G Zmiz1 zinc finger MIZ-type containing 1 involved_in ISO (MGI:5790022|PMID:26522984) UniProt PMID:26522984 MGI:5790022 NCBI chrNW_004624754:12,106,828...12,299,188
Ensembl chrNW_004624754:12,145,570...12,299,318
JBrowse link
positive regulation of T cell differentiation in thymus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ada adenosine deaminase acts_upstream_of_or_within ISO (MGI:3620422|PMID:12163459), (MGI:3690682|PMID:11067867), (MGI:3774231|PMID:16670300)
(MGI:3640996|PMID:11435465)
(MGI:3690682|PMID:11067867), (MGI:3774231|PMID:16670300)
MGI PMID:11067867 PMID:11435465 PMID:12163459 PMID:16670300 MGI:3620422 MGI:3640996 MGI:3690682 MGI:3774231 NCBI chrNW_004624790:9,809,550...9,829,199
Ensembl chrNW_004624790:9,809,492...9,829,883
JBrowse link
G Adam8 ADAM metallopeptidase domain 8 involved_in ISO (MGI:4836302|PMID:20856819) BHF-UCL PMID:20856819 MGI:4836302 NCBI chrNW_004624737:13,459,274...13,474,686 JBrowse link
G Egr3 early growth response 3 acts_upstream_of_or_within ISO (MGI:5139961|PMID:21737317) MGI PMID:21737317 MGI:5139961 NCBI chrNW_004624758:18,180,787...18,186,148
Ensembl chrNW_004624758:18,180,123...18,186,196
JBrowse link
G Ihh Indian hedgehog signaling molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624823:5,959,329...5,965,584
Ensembl chrNW_004624823:5,959,448...5,964,769
JBrowse link
G Il2rg interleukin 2 receptor subunit gamma acts_upstream_of_or_within ISO (MGI:1327709|PMID:9916699)
(MGI:1095961|PMID:9252128)
MGI PMID:9252128 PMID:9916699 MGI:1095961 MGI:1327709 NCBI chrNW_004624903:1,402,586...1,406,554
Ensembl chrNW_004624903:1,402,481...1,406,600
JBrowse link
G Il7r interleukin 7 receptor acts_upstream_of_or_within ISO (MGI:893320|PMID:9215626) MGI PMID:9215626 MGI:893320 NCBI chrNW_004624759:19,067,933...19,103,007
Ensembl chrNW_004624759:19,067,856...19,098,859
JBrowse link
G Rasgrp1 RAS guanyl releasing protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624804:5,691,011...5,763,314
Ensembl chrNW_004624804:5,690,400...5,763,288
JBrowse link
G Shh sonic hedgehog signaling molecule involved_in ISO (MGI:3836494|PMID:19109233) BHF-UCL PMID:19109233 MGI:3836494 NCBI chrNW_004624800:2,202,986...2,215,309
Ensembl chrNW_004624800:2,203,393...2,212,068
JBrowse link
G Tespa1 thymocyte expressed, positive selection associated 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624983:31,552...47,575
Ensembl chrNW_004624983:31,766...45,077
JBrowse link
G Vnn1 vanin 1 involved_in ISO (MGI:84472|PMID:8934567) BHF-UCL PMID:8934567 MGI:84472 NCBI chrNW_004624753:6,869,269...6,892,217
Ensembl chrNW_004624753:6,867,953...6,892,186
JBrowse link
positive regulation of T cell homeostatic proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd24 CD24 molecule acts_upstream_of_or_within ISO (MGI:3510302|PMID:15477346) MGI PMID:15477346 MGI:3510302 NCBI chrNW_004624780:15,287,426...15,292,292
Ensembl chrNW_004624780:15,287,433...15,292,292
JBrowse link
positive regulation of T cell proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adk adenosine kinase ISO decreased expression of mRNA under high glucose in the absence of insulin RGD PMID:16827901 RGD:2313341 NCBI chrNW_004624754:7,612,817...8,156,038
Ensembl chrNW_004624754:7,612,881...8,156,681
JBrowse link
G Aif1 allograft inflammatory factor 1 involved_in ISS UniProt GO_REF:0000024 NCBI chrNW_004624754:24,590,071...24,591,913
Ensembl chrNW_004624754:24,590,071...24,591,904
JBrowse link
G Anxa1 annexin A1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624811:765,338...782,203
Ensembl chrNW_004624811:764,940...782,198
JBrowse link
G Carmil2 capping protein regulator and myosin 1 linker 2 acts_upstream_of_or_within ISO (MGI:5544872|PMID:23793062) MGI PMID:23793062 MGI:5544872 NCBI chrNW_004624746:18,692,179...18,704,952
Ensembl chrNW_004624746:18,692,225...18,704,476
JBrowse link
G Ccdc88b coiled-coil domain containing 88B involved_in ISO (MGI:5763360|PMID:25403443) UniProt PMID:25403443 MGI:5763360 NCBI chrNW_004624767:21,973,147...21,987,317 JBrowse link