ONTOLOGY REPORT - ANNOTATIONS
Term: intraciliary transport
Accession: GO:0042073
browse the term
Definition: The bidirectional movement of large protein complexes along microtubules within a cilium, mediated by motor proteins.
Comment: Note that we deem cilium and microtubule-based flagellum to be equivalent.
Synonyms: exact_synonym: intraflagellar transport; intraflagellar transport involved in cilium organization; intraflagellar transport involved in microtubule-based flagellum organisation
related_synonym: IFT
alt_id: GO:0035734
xref: Wikipedia:Intraflagellar_transport
only_in_taxon: NCBITaxon:2759 ! Eukaryota
never_in_taxon: NCBITaxon:3176 ! Zygnematales; NCBITaxon:3312 ! Coniferophyta; NCBITaxon:3378 ! Gnetales; NCBITaxon:3398 ! Magnoliophyta; NCBITaxon:4890 ! Ascomycota; NCBITaxon:5782 ! Dictyostelium
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ARL3
ADP ribosylation factor like GTPase 3
acts_upstream_of_or_within involved_in
ISO IEA
(MGI:5317033|PMID:21289087)
MGI Ensembl
PMID:21289087
GO_REF:0000107 MGI:5317033
NCBI chr10:102,673,731...102,714,397
Ensembl chr10:102,673,731...102,714,397
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BBS12
Bardet-Biedl syndrome 12
acts_upstream_of_or_within involved_in
ISO IEA
(MGI:5462139|PMID:22869374)
MGI Ensembl
PMID:22869374
GO_REF:0000107 MGI:5462139
NCBI chr 4:122,700,442...122,744,939
Ensembl chr 4:122,732,702...122,744,942
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CEP131
centrosomal protein 131
acts_upstream_of_or_within involved_in
ISO IEA
(MGI:5647985|PMID:24415959)
MGI Ensembl
PMID:24415959
GO_REF:0000107 MGI:5647985
NCBI chr17:81,189,596...81,222,965
Ensembl chr17:81,189,593...81,222,999
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CILK1
ciliogenesis associated kinase 1
involved_in
ISS IBA IEA
UniProt GO_Central TreeGrafter Ensembl
GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118
NCBI chr 6:53,001,303...53,061,824
Ensembl chr 6:53,001,279...53,061,824
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DAW1
dynein assembly factor with WD repeats 1
acts_upstream_of_or_within_positive_effect
ISS
UniProt
GO_REF:0000024
NCBI chr 2:227,871,631...227,924,344
Ensembl chr 2:227,871,054...227,924,344
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DYNC2I1
dynein 2 intermediate chain 1
involved_in
IEA
InterPro
GO_REF:0000002
NCBI chr 7:158,839,245...158,958,698
Ensembl chr 7:158,856,558...158,956,747
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DYNC2I2
dynein 2 intermediate chain 2
involved_in
IEA IBA
TreeGrafter GO_Central
GO_REF:0000033 GO_REF:0000118
NCBI chr 9:128,633,653...128,684,460
Ensembl chr 9:128,633,653...128,656,847
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FUZ
fuzzy planar cell polarity protein
involved_in
NAS
(PMID:27158779)
ComplexPortal
PMID:27158779
NCBI chr19:49,806,866...49,813,553
Ensembl chr19:49,806,866...49,817,376
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IFT122
intraflagellar transport 122
involved_in
IMP
(PMID:29220510)
UniProt
PMID:29220510
NCBI chr 3:129,440,224...129,520,507
Ensembl chr 3:129,429,607...129,520,510
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IFT140
intraflagellar transport 140
acts_upstream_of_or_within involved_in
ISO IEA
(MGI:5604762|PMID:24619649)
MGI Ensembl
PMID:24619649
GO_REF:0000107 MGI:5604762
NCBI chr16:1,510,427...1,612,072
Ensembl chr16:1,510,427...1,612,072
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IFT172
intraflagellar transport 172
involved_in
IEA IBA
TreeGrafter GO_Central
GO_REF:0000033 GO_REF:0000118
NCBI chr 2:27,444,377...27,489,743
Ensembl chr 2:27,444,377...27,489,805
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IFT20
intraflagellar transport 20
acts_upstream_of_or_within involved_in
ISO IBA IEA
(MGI:5604762|PMID:24619649)
MGI GO_Central TreeGrafter Ensembl
PMID:24619649
GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 MGI:5604762
NCBI chr17:28,328,326...28,335,472
Ensembl chr17:28,328,325...28,335,489
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IFT25
intraflagellar transport 25
involved_in
IEA
InterPro
GO_REF:0000002
NCBI chr 1:53,911,576...53,946,305
Ensembl chr 1:53,916,574...53,945,699
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IFT27
intraflagellar transport 27
involved_in
IEA IBA ISS IMP
(PMID:25443296)
InterPro TreeGrafter GO_Central UniProt Ensembl
PMID:25443296
GO_REF:0000002 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118
NCBI chr22:36,758,211...36,776,119
Ensembl chr22:36,758,202...36,776,256
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IFT46
intraflagellar transport 46
involved_in
IEA IBA ISS
InterPro GO_Central TreeGrafter BHF-UCL
GO_REF:0000002 GO_REF:0000024 GO_REF:0000033 GO_REF:0000118
NCBI chr11:118,544,543...118,576,898
Ensembl chr11:118,544,528...118,572,970
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IFT52
intraflagellar transport 52
involved_in
IEA IBA
TreeGrafter GO_Central
GO_REF:0000033 GO_REF:0000118
NCBI chr20:43,590,937...43,647,299
Ensembl chr20:43,590,937...43,647,299
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IFT56
intraflagellar transport 56
involved_in
ISS IEA
UniProt Ensembl
GO_REF:0000024 GO_REF:0000107
NCBI chr 7:139,133,778...139,191,986
Ensembl chr 7:139,133,744...139,191,986
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IFT57
intraflagellar transport 57
involved_in
IBA IEA
GO_Central TreeGrafter
GO_REF:0000033 GO_REF:0000118
NCBI chr 3:108,160,812...108,222,424
Ensembl chr 3:108,160,812...108,222,435
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IFT70A
intraflagellar transport 70A
involved_in
IEA IBA
UniProt TreeGrafter GO_Central
GO_REF:0000033 GO_REF:0000104 GO_REF:0000118
NCBI chr 2:177,612,999...177,618,742
Ensembl chr 2:177,612,999...177,618,742
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IFT70B
intraflagellar transport 70B
involved_in
IEA IBA
UniProt GO_Central TreeGrafter
GO_REF:0000033 GO_REF:0000104 GO_REF:0000118
NCBI chr 2:177,548,998...177,552,796
Ensembl chr 2:177,548,998...177,552,796
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IFT74
intraflagellar transport 74
involved_in
IEA
InterPro
GO_REF:0000002
NCBI chr 9:26,947,110...27,066,134
Ensembl chr 9:26,947,039...27,066,134
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IFT81
intraflagellar transport 81
involved_in
IEA IBA
InterPro GO_Central TreeGrafter
GO_REF:0000002 GO_REF:0000033 GO_REF:0000118
NCBI chr12:110,124,357...110,218,793
Ensembl chr12:110,124,335...110,218,793
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IFT88
intraflagellar transport 88
involved_in
IBA IEA
GO_Central TreeGrafter
GO_REF:0000033 GO_REF:0000118
NCBI chr13:20,567,157...20,691,444
Ensembl chr13:20,567,138...20,691,444
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INTU
inturned planar cell polarity protein
involved_in
NAS
(PMID:27158779)
ComplexPortal
PMID:27158779
NCBI chr 4:127,632,957...127,726,737
Ensembl chr 4:127,623,271...127,726,737
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KIF3B
kinesin family member 3B
involved_in
IMP
(PMID:32386558)
UniProt
PMID:32386558
NCBI chr20:32,277,651...32,335,011
Ensembl chr20:32,277,651...32,335,011
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LCA5
lebercilin LCA5
acts_upstream_of_or_within involved_in
ISO IBA IEA
(MGI:5050784|PMID:21606596)
MGI GO_Central TreeGrafter
PMID:21606596
GO_REF:0000033 GO_REF:0000118 MGI:5050784
NCBI chr 6:79,484,991...79,538,782
Ensembl chr 6:79,484,991...79,537,458
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LCA5L
lebercilin LCA5 like
involved_in
IBA IEA
GO_Central TreeGrafter
GO_REF:0000033 GO_REF:0000118
NCBI chr21:39,405,728...39,445,778
Ensembl chr21:39,405,728...39,445,805
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MAK
male germ cell associated kinase
involved_in
IEA IBA
TreeGrafter GO_Central
GO_REF:0000033 GO_REF:0000118
NCBI chr 6:10,762,723...10,838,539
Ensembl chr 6:10,762,723...10,838,553
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NME7
NME/NM23 family member 7
acts_upstream_of_or_within
ISO
(MGI:5317033|PMID:21289087)
MGI
PMID:21289087
MGI:5317033
NCBI chr 1:169,132,531...169,367,797
Ensembl chr 1:169,132,531...169,367,948
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RABL2B
RAB, member of RAS oncogene family like 2B
involved_in
IMP
(PMID:28625565)
UniProt
PMID:28625565
NCBI chr22:50,767,506...50,783,636
Ensembl chr22:50,767,501...50,783,667
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RPGR
retinitis pigmentosa GTPase regulator
involved_in
ISS IEA IBA
UniProt TreeGrafter GO_Central
GO_REF:0000024 GO_REF:0000033 GO_REF:0000118
NCBI chr X:38,269,163...38,327,509
Ensembl chr X:38,269,163...38,327,544
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SSNA1
SS nuclear autoantigen 1
acts_upstream_of_or_within involved_in
ISO IEA
(MGI:5317033|PMID:21289087)
MGI Ensembl
PMID:21289087
GO_REF:0000107 MGI:5317033
NCBI chr 9:137,188,676...137,190,366
Ensembl chr 9:137,188,660...137,190,370
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TRAF3IP1
TRAF3 interacting protein 1
involved_in
IBA IEA
GO_Central TreeGrafter
GO_REF:0000033 GO_REF:0000118
NCBI chr 2:238,320,518...238,400,900
Ensembl chr 2:238,320,441...238,400,897
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TUB
TUB bipartite transcription factor
acts_upstream_of_or_within
IDA
(PMID:28154160)
MGI
PMID:28154160
NCBI chr11:8,019,059...8,106,243
Ensembl chr11:8,019,244...8,106,243
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WDPCP
WD repeat containing planar cell polarity effector
involved_in
NAS
(PMID:27158779)
ComplexPortal
PMID:27158779
NCBI chr 2:63,119,559...63,840,826
Ensembl chr 2:63,119,559...63,827,843
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WDR35
WD repeat domain 35
involved_in
IMP
(PMID:29220510)
UniProt
PMID:29220510
NCBI chr 2:19,910,263...19,990,105
Ensembl chr 2:19,910,263...19,990,105
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CCDC38
coiled-coil domain containing 38
acts_upstream_of involved_in
ISO IEA
(MGI:7286438|PMID:35587122)
MGI Ensembl
PMID:35587122
GO_REF:0000107 MGI:7286438
NCBI chr12:95,867,048...95,943,233
Ensembl chr12:95,867,048...95,942,635
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CILK1
ciliogenesis associated kinase 1
involved_in
IEA ISS
Ensembl UniProt
GO_REF:0000024 GO_REF:0000107
NCBI chr 6:53,001,303...53,061,824
Ensembl chr 6:53,001,279...53,061,824
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CLUAP1
clusterin associated protein 1
involved_in
NAS
(PMID:26980730)
ComplexPortal
PMID:26980730
NCBI chr16:3,495,427...3,539,048
Ensembl chr16:3,500,976...3,539,048
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IFT122
intraflagellar transport 122
involved_in
ISS
BHF-UCL
GO_REF:0000024
NCBI chr 3:129,440,224...129,520,507
Ensembl chr 3:129,429,607...129,520,510
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IFT172
intraflagellar transport 172
involved_in
NAS
(PMID:26980730)
ComplexPortal
PMID:26980730
NCBI chr 2:27,444,377...27,489,743
Ensembl chr 2:27,444,377...27,489,805
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IFT20
intraflagellar transport 20
involved_in
NAS
(PMID:26980730)
ComplexPortal
PMID:26980730
NCBI chr17:28,328,326...28,335,472
Ensembl chr17:28,328,325...28,335,489
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IFT22
intraflagellar transport 22
involved_in
NAS
(PMID:26980730)
ComplexPortal
PMID:26980730
NCBI chr 7:101,310,914...101,321,823
Ensembl chr 7:101,310,914...101,321,823
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IFT25
intraflagellar transport 25
involved_in
NAS
(PMID:26980730)
ComplexPortal
PMID:26980730
NCBI chr 1:53,911,576...53,946,305
Ensembl chr 1:53,916,574...53,945,699
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IFT27
intraflagellar transport 27
involved_in
NAS
(PMID:26980730)
ComplexPortal
PMID:26980730
NCBI chr22:36,758,211...36,776,119
Ensembl chr22:36,758,202...36,776,256
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IFT46
intraflagellar transport 46
involved_in
NAS
(PMID:26980730)
ComplexPortal
PMID:26980730
NCBI chr11:118,544,543...118,576,898
Ensembl chr11:118,544,528...118,572,970
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IFT52
intraflagellar transport 52
involved_in
IMP NAS
(PMID:27466190) (PMID:26980730)
UniProt ComplexPortal
PMID:26980730 PMID:27466190
NCBI chr20:43,590,937...43,647,299
Ensembl chr20:43,590,937...43,647,299
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IFT56
intraflagellar transport 56
involved_in
NAS IEA IBA
(PMID:26980730)
ComplexPortal TreeGrafter GO_Central
PMID:26980730
GO_REF:0000033 GO_REF:0000118
NCBI chr 7:139,133,778...139,191,986
Ensembl chr 7:139,133,744...139,191,986
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IFT57
intraflagellar transport 57
involved_in
NAS
(PMID:26980730)
ComplexPortal
PMID:26980730
NCBI chr 3:108,160,812...108,222,424
Ensembl chr 3:108,160,812...108,222,435
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IFT70B
intraflagellar transport 70B
involved_in
NAS
(PMID:26980730)
ComplexPortal
PMID:26980730
NCBI chr 2:177,548,998...177,552,796
Ensembl chr 2:177,548,998...177,552,796
G
IFT74
intraflagellar transport 74
involved_in
NAS
(PMID:26980730)
ComplexPortal
PMID:26980730
NCBI chr 9:26,947,110...27,066,134
Ensembl chr 9:26,947,039...27,066,134
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IFT80
intraflagellar transport 80
involved_in
NAS
(PMID:26980730)
ComplexPortal
PMID:26980730
NCBI chr 3:160,256,986...160,399,225
Ensembl chr 3:160,256,986...160,399,880
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IFT81
intraflagellar transport 81
involved_in
NAS
(PMID:26980730)
ComplexPortal
PMID:26980730
NCBI chr12:110,124,357...110,218,793
Ensembl chr12:110,124,335...110,218,793
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IFT88
intraflagellar transport 88
involved_in
NAS
(PMID:26980730)
ComplexPortal
PMID:26980730
NCBI chr13:20,567,157...20,691,444
Ensembl chr13:20,567,138...20,691,444
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TRAF3IP1
TRAF3 interacting protein 1
involved_in
NAS
(PMID:26980730)
ComplexPortal
PMID:26980730
NCBI chr 2:238,320,518...238,400,900
Ensembl chr 2:238,320,441...238,400,897
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CILK1
ciliogenesis associated kinase 1
involved_in
ISS IEA
UniProt Ensembl
GO_REF:0000024 GO_REF:0000107
NCBI chr 6:53,001,303...53,061,824
Ensembl chr 6:53,001,279...53,061,824
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DYNC2H1
dynein cytoplasmic 2 heavy chain 1
acts_upstream_of_or_within involved_in
ISO IEA IBA
(MGI:3804352|PMID:18488998)
MGI TreeGrafter GO_Central Ensembl
PMID:18488998
GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 MGI:3804352
NCBI chr11:103,109,426...103,479,863
Ensembl chr11:103,109,410...103,479,863
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DYNC2I1
dynein 2 intermediate chain 1
involved_in
IDA
(PMID:29742051), (PMID:30649997)
UniProt
PMID:29742051 PMID:30649997
NCBI chr 7:158,839,245...158,958,698
Ensembl chr 7:158,856,558...158,956,747
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DYNC2I2
dynein 2 intermediate chain 2
involved_in
IEA IMP
(PMID:29742051), (PMID:30649997)
Ensembl UniProt
PMID:29742051 PMID:30649997
GO_REF:0000107
NCBI chr 9:128,633,653...128,684,460
Ensembl chr 9:128,633,653...128,656,847
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DYNC2LI1
dynein cytoplasmic 2 light intermediate chain 1
involved_in
IEA IBA
InterPro TreeGrafter GO_Central
GO_REF:0000002 GO_REF:0000033 GO_REF:0000118
NCBI chr 2:43,774,039...43,828,347
Ensembl chr 2:43,774,039...43,810,010
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DYNLL1
dynein light chain LC8-type 1
acts_upstream_of_or_within involved_in
ISO IBA IEA
(MGI:5615046|PMID:25294941)
MGI GO_Central TreeGrafter
PMID:25294941
GO_REF:0000033 GO_REF:0000118 MGI:5615046
NCBI chr12:120,469,842...120,498,493
Ensembl chr12:120,469,850...120,498,493
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DYNLT2B
dynein light chain Tctex-type 2B
involved_in
IMP
(PMID:29742051)
UniProt
PMID:29742051
NCBI chr 3:196,291,219...196,318,240
Ensembl chr 3:196,291,219...196,318,299
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IFT122
intraflagellar transport 122
involved_in
ISS IEA IBA NAS
(PMID:27806291)
UniProt TreeGrafter GO_Central ComplexPortal
PMID:27806291
GO_REF:0000024 GO_REF:0000033 GO_REF:0000118
NCBI chr 3:129,440,224...129,520,507
Ensembl chr 3:129,429,607...129,520,510
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IFT140
intraflagellar transport 140
acts_upstream_of_or_within involved_in
ISO IEA IBA NAS IMP
(MGI:5635784|PMID:24009529) (PMID:27806291) (PMID:22503633)
MGI TreeGrafter GO_Central ComplexPortal UniProt Ensembl
PMID:22503633 PMID:24009529 PMID:27806291
GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 MGI:5635784
NCBI chr16:1,510,427...1,612,072
Ensembl chr16:1,510,427...1,612,072
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IFT43
intraflagellar transport 43
involved_in
IMP IEA IBA NAS
(PMID:21378380) (PMID:27806291)
UniProt TreeGrafter GO_Central ComplexPortal
PMID:21378380 PMID:27806291
GO_REF:0000033 GO_REF:0000118
NCBI chr14:75,985,763...76,084,073
Ensembl chr14:75,902,136...76,084,585
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TTC21A
tetratricopeptide repeat domain 21A
involved_in
IEA IBA
TreeGrafter GO_Central
GO_REF:0000033 GO_REF:0000118
NCBI chr 3:39,107,680...39,138,900
Ensembl chr 3:39,107,680...39,138,903
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TTC21B
tetratricopeptide repeat domain 21B
acts_upstream_of_or_within involved_in
ISO IBA IEA NAS
(MGI:4367927|PMID:19732765) (PMID:27806291) (MGI:5789453|PMID:27482817) (MGI:3784018|PMID:18327258)
MGI GO_Central TreeGrafter ComplexPortal Ensembl
PMID:18327258 PMID:19732765 PMID:27482817 PMID:27806291
GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 MGI:3784018 MGI:4367927 MGI:5789453
NCBI chr 2:165,873,362...165,953,776
Ensembl chr 2:165,857,475...165,953,851
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WDR19
WD repeat domain 19
involved_in acts_upstream_of_or_within
IEA IBA NAS IMP
(PMID:27806291) (PMID:20889716)
InterPro TreeGrafter GO_Central ComplexPortal MGI
PMID:20889716 PMID:27806291
GO_REF:0000002 GO_REF:0000033 GO_REF:0000118
NCBI chr 4:39,182,529...39,285,810
Ensembl chr 4:39,182,504...39,285,810
G
WDR35
WD repeat domain 35
acts_upstream_of_or_within involved_in
IMP IEA IBA NAS
(PMID:20889716) (PMID:27806291)
MGI TreeGrafter GO_Central ComplexPortal
PMID:20889716 PMID:27806291
GO_REF:0000033 GO_REF:0000118
NCBI chr 2:19,910,263...19,990,105
Ensembl chr 2:19,910,263...19,990,105
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CEP131
centrosomal protein 131
involved_in
IEA IMP
(PMID:24550735)
InterPro UniProt
PMID:24550735
GO_REF:0000002
NCBI chr17:81,189,596...81,222,965
Ensembl chr17:81,189,593...81,222,999
G
DYNC2LI1
dynein cytoplasmic 2 light intermediate chain 1
involved_in
IMP IBA IEA
(PMID:26077881)
UniProt GO_Central TreeGrafter InterPro
PMID:26077881
GO_REF:0000002 GO_REF:0000033 GO_REF:0000118
NCBI chr 2:43,774,039...43,828,347
Ensembl chr 2:43,774,039...43,810,010
G
IFT56
intraflagellar transport 56
involved_in
IBA IEA
GO_Central TreeGrafter
GO_REF:0000033 GO_REF:0000118
NCBI chr 7:139,133,778...139,191,986
Ensembl chr 7:139,133,744...139,191,986
G
IFT74
intraflagellar transport 74
involved_in
IMP IBA IEA
(PMID:23990561)
UniProt GO_Central TreeGrafter
PMID:23990561
GO_REF:0000033 GO_REF:0000118
NCBI chr 9:26,947,110...27,066,134
Ensembl chr 9:26,947,039...27,066,134
G
IFT81
intraflagellar transport 81
involved_in
IMP
(PMID:23990561)
UniProt
PMID:23990561
NCBI chr12:110,124,357...110,218,793
Ensembl chr12:110,124,335...110,218,793
G
PCM1
pericentriolar material 1
involved_in
IMP IEA IBA
(PMID:24550735)
UniProt TreeGrafter GO_Central
PMID:24550735
GO_REF:0000033 GO_REF:0000118
NCBI chr 8:17,922,988...18,029,948
Ensembl chr 8:17,922,842...18,029,948
G
SSX2IP
SSX family member 2 interacting protein
involved_in
IMP IEA IBA
(PMID:24356449)
UniProt TreeGrafter GO_Central
PMID:24356449
GO_REF:0000033 GO_REF:0000118
NCBI chr 1:84,643,706...84,690,745
Ensembl chr 1:84,643,706...84,690,803
G
DYNLT2B
dynein light chain Tctex-type 2B
involved_in
IMP
(PMID:26044572)
UniProt
PMID:26044572
NCBI chr 3:196,291,219...196,318,240
Ensembl chr 3:196,291,219...196,318,299
G
TTC21B
tetratricopeptide repeat domain 21B
involved_in
IMP
(PMID:27932497)
UniProt
PMID:27932497
NCBI chr 2:165,873,362...165,953,776
Ensembl chr 2:165,857,475...165,953,851
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