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ONTOLOGY REPORT - ANNOTATIONS

Term:pattern recognition receptor activity
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Accession:GO:0038187 term browser browse the term
Definition:Combining with a pathogen-associated molecular pattern (PAMP), a structure conserved among microbial species to initiate an innate immune response.
Synonyms:exact_synonym: PRR;   PRR activity
 narrow_synonym: MAMP receptor activity;   PAMP receptor activity;   microbe-associated molecular pattern receptor activity;   pathogen associated molecular pattern receptor activity
 related_synonym: macrophage receptor activity;   signaling pattern recognition receptor activity
 alt_id: GO:0008329
 xref: Wikipedia:Pattern_recognition_receptor

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pattern recognition receptor activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aim2 absent in melanoma 2 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936740:1,447,869...1,460,836
Ensembl chrNW_004936740:1,451,001...1,460,836 		JBrowse link
G Clec4d C-type lectin domain family 4 member D enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936858:303,639...312,092
Ensembl chrNW_004936858:303,639...312,083 		JBrowse link
G Clec4e C-type lectin domain family 4 member E enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936858:316,954...321,668
Ensembl chrNW_004936858:316,954...321,668 		JBrowse link
G Clec7a C-type lectin domain containing 7A enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936902:436,224...446,435 JBrowse link
G Colec12 collectin subfamily member 12 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936550:169,084...350,209
Ensembl chrNW_004936550:169,084...350,501 		JBrowse link
G Dhx16 DEAH-box helicase 16 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936837:324,244...341,667
Ensembl chrNW_004936837:324,243...341,713 		JBrowse link
G Ifih1 interferon induced with helicase C domain 1 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936469:16,721,306...16,778,249
Ensembl chrNW_004936469:16,721,677...16,774,903 		JBrowse link
G LOC101959402 deleted in malignant brain tumors 1 protein enables ISO (PMID:19189310) UniProt PMID:19189310 NCBI chrNW_004936486:11,377,485...11,545,624 JBrowse link
G LOC101961439 twinfilin-2 enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936529:3,538,813...3,555,562
Ensembl chrNW_004936529:3,538,862...3,555,593 		JBrowse link
G LOC101965964 ficolin-1 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936669:2,421,092...2,428,240
Ensembl chrNW_004936669:2,421,087...2,431,714 		JBrowse link
G Nlrp1 NLR family pyrin domain containing 1 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936677:2,248,153...2,290,802
Ensembl chrNW_004936677:2,248,903...2,289,151 		JBrowse link
G Nlrp6 NLR family pyrin domain containing 6 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936888:145,642...151,716
Ensembl chrNW_004936888:145,642...151,182 		JBrowse link
G Nod1 nucleotide binding oligomerization domain containing 1 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936478:6,717,354...6,768,293
Ensembl chrNW_004936478:6,715,245...6,768,372 		JBrowse link
G Nod2 nucleotide binding oligomerization domain containing 2 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936475:3,708,069...3,742,845
Ensembl chrNW_004936475:3,713,362...3,745,982 		JBrowse link
G Rigi RNA sensor RIG-I enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936524:1,141,840...1,200,638
Ensembl chrNW_004936524:1,140,971...1,200,638 		JBrowse link
G Tlr2 toll like receptor 2 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936576:522,234...531,660
Ensembl chrNW_004936576:527,434...529,788 		JBrowse link
G Tlr3 toll like receptor 3 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936554:3,370,766...3,388,125
Ensembl chrNW_004936554:3,369,469...3,385,907 		JBrowse link
G Tlr5 toll like receptor 5 enables ISO (PMID:14625549), (PMID:17128265) UniProt PMID:14625549 PMID:17128265 NCBI chrNW_004936526:383,490...387,007
Ensembl chrNW_004936526:383,418...401,552 		JBrowse link
G Tlr7 toll like receptor 7 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936470:2,593,544...2,610,972
Ensembl chrNW_004936470:2,607,508...2,610,675 		JBrowse link
G Tlr8 toll like receptor 8 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936470:2,638,020...2,642,201
Ensembl chrNW_004936470:2,638,014...2,641,133 		JBrowse link
(1->3)-beta-D-glucan immune receptor activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clec7a C-type lectin domain containing 7A enables ISO (PMID:12719478) MGI PMID:12719478 NCBI chrNW_004936902:436,224...446,435 JBrowse link
lipopolysaccharide immune receptor activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd14 CD14 molecule enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936531:9,572,392...9,575,771
Ensembl chrNW_004936531:9,571,796...9,575,923 		JBrowse link
G Ly96 lymphocyte antigen 96 enables ISO (PMID:19252480) UniProt PMID:19252480 NCBI chrNW_004936648:2,653,252...2,671,453 JBrowse link
G Ptafr platelet activating factor receptor enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:12,333,905...12,337,140
Ensembl chrNW_004936474:12,336,071...12,337,099 		JBrowse link
G Scarb1 scavenger receptor class B member 1 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936558:530,828...555,098
Ensembl chrNW_004936558:530,828...552,892 		JBrowse link
G Tlr4 toll like receptor 4 enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936487:6,519,140...6,532,018
Ensembl chrNW_004936487:6,518,441...6,533,095 		JBrowse link
lipoteichoic acid immune receptor activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd36 CD36 molecule (CD36 blood group) enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936810:791,823...838,303
Ensembl chrNW_004936810:758,182...838,365 		JBrowse link
peptidoglycan immune receptor activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC101970371 peptidoglycan recognition protein 3 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936580:3,184,904...3,197,203
Ensembl chrNW_004936580:3,184,904...3,194,319 		JBrowse link
G LOC101974774 peptidoglycan recognition protein 4 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936580:3,206,557...3,214,790
Ensembl chrNW_004936580:3,207,350...3,218,643 		JBrowse link
G Pglyrp1 peptidoglycan recognition protein 1 enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936706:2,317,137...2,320,993
Ensembl chrNW_004936706:2,315,132...2,320,796 		JBrowse link
G Pglyrp2 peptidoglycan recognition protein 2 enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936596:5,038,452...5,043,172
Ensembl chrNW_004936596:5,038,452...5,044,569 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  molecular_function 17144
    molecular transducer activity 1660
      signaling receptor activity 1660
        pattern recognition receptor activity 30
          lipoarabinomannan immune receptor activity 0
          lipopolysaccharide immune receptor activity 5
          lipoteichoic acid immune receptor activity 1
          peptidoglycan immune receptor activity 4
          polysaccharide immune receptor activity + 1
paths to the root