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ONTOLOGY REPORT - ANNOTATIONS

Term:pattern recognition receptor activity
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Accession:GO:0038187 term browser browse the term
Definition:Combining with a pathogen-associated molecular pattern (PAMP), a structure conserved among microbial species to initiate an innate immune response.
Synonyms:exact_synonym: PRR;   PRR activity
 narrow_synonym: MAMP receptor activity;   PAMP receptor activity;   microbe-associated molecular pattern receptor activity;   pathogen associated molecular pattern receptor activity
 related_synonym: macrophage receptor activity;   signaling pattern recognition receptor activity
 alt_id: GO:0008329
 xref: Wikipedia:Pattern_recognition_receptor

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pattern recognition receptor activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clec4e C-type lectin domain family 4 member E enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004624860:4,108,782...4,113,693
Ensembl chrNW_004624860:4,108,640...4,113,839 		JBrowse link
G Clec7a C-type lectin domain containing 7A enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624752:26,871,556...26,885,778
Ensembl chrNW_004624752:26,871,292...26,891,910 		JBrowse link
G Colec12 collectin subfamily member 12 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004624770:10,860,097...11,136,478
Ensembl chrNW_004624770:10,859,205...11,013,175 		JBrowse link
G Dhx16 DEAH-box helicase 16 enables ISO (PMID:35263596) UniProt PMID:35263596 NCBI chrNW_004624754:25,040,684...25,054,632
Ensembl chrNW_004624754:25,040,711...25,057,856 		JBrowse link
G Dmbt1 deleted in malignant brain tumors 1 enables ISO (PMID:19189310) UniProt PMID:19189310 NCBI chrNW_004624737:24,135,083...24,164,935 JBrowse link
G Fcn1 ficolin 1 enables ISO (PMID:21037097) UniProt PMID:21037097 NCBI chrNW_004624760:2,743,996...2,751,116
Ensembl chrNW_004624760:2,743,996...2,751,110 		JBrowse link
G Ifih1 interferon induced with helicase C domain 1 enables ISO (PMID:21217758), (PMID:23273991) UniProt PMID:21217758 PMID:23273991 NCBI chrNW_004624732:3,187,791...3,248,795
Ensembl chrNW_004624732:3,187,791...3,250,981 		JBrowse link
G LOC101703392 twinfilin-2 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624730:6,004,706...6,020,876 JBrowse link
G Nlrp6 NLR family pyrin domain containing 6 enables ISO (PMID:31932628), (PMID:33377178), (PMID:34678144)
(MGI:6833928|PMID:34678144)		 UniProt PMID:31932628 PMID:33377178 PMID:34678144 MGI:6833928 NCBI chrNW_004624766:22,143,405...22,150,903 JBrowse link
G Nod1 nucleotide binding oligomerization domain containing 1 enables ISO (PMID:11058605), (PMID:12791997), (PMID:12796777), (PMID:12871942), (PMID:23300079), (PMID:31649195), (PMID:33942347)
(MGI:6210191|PMID:27007849), (PMID:18261938)		 UniProt
MGI		 PMID:11058605 PMID:12791997 PMID:12796777 PMID:12871942 PMID:18261938 More... MGI:6210191 NCBI chrNW_004624739:285,791...339,752
Ensembl chrNW_004624739:285,689...341,956 		JBrowse link
G Nod2 nucleotide binding oligomerization domain containing 2 enables ISO (PMID:12871942), (PMID:17355968), (PMID:22857257), (PMID:23300079), (PMID:27748583), (PMID:31649195), (PMID:33942347)
(MGI:5763542|PMID:25429073)
(MGI:6210191|PMID:27007849), (PMID:18261938)
(PMID:22033934)		 UniProt
MGI		 PMID:12871942 PMID:17355968 PMID:18261938 PMID:22033934 PMID:22857257 More... MGI:5763542 MGI:6210191 NCBI chrNW_004624757:5,956,873...6,000,052
Ensembl chrNW_004624757:5,958,486...6,000,103 		JBrowse link
G Rigi RNA sensor RIG-I enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004624736:37,134,718...37,204,543
Ensembl chrNW_004624736:37,133,059...37,197,218 		JBrowse link
G Tlr2 toll like receptor 2 enables ISO (PMID:10384090)
(PMID:22033934)		 UniProt
MGI		 PMID:10384090 PMID:22033934 NCBI chrNW_004624858:4,931,820...4,984,175
Ensembl chrNW_004624858:4,979,485...4,981,833 		JBrowse link
G Tlr3 toll like receptor 3 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004624769:16,925,969...16,945,250
Ensembl chrNW_004624769:16,925,984...16,941,196 		JBrowse link
G Tlr5 toll like receptor 5 enables ISO (PMID:14625549), (PMID:17128265) UniProt PMID:14625549 PMID:17128265 NCBI chrNW_004624835:5,495,723...5,503,462
Ensembl chrNW_004624835:5,500,461...5,503,034 		JBrowse link
G Tlr7 toll like receptor 7 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624882:1,375,216...1,379,705 JBrowse link
G Tlr8 toll like receptor 8 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624882:1,240,519...1,247,311
Ensembl chrNW_004624882:1,240,626...1,312,468 		JBrowse link
(1->3)-beta-D-glucan immune receptor activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clec7a C-type lectin domain containing 7A enables ISO (PMID:12719478) MGI PMID:12719478 NCBI chrNW_004624752:26,871,556...26,885,778
Ensembl chrNW_004624752:26,871,292...26,891,910 		JBrowse link
lipopolysaccharide immune receptor activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd14 CD14 molecule enables ISO (PMID:15294986) AgBase PMID:15294986 NCBI chrNW_004624743:33,372,023...33,374,438
Ensembl chrNW_004624743:33,367,898...33,373,922 		JBrowse link
G Ly96 lymphocyte antigen 96 enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624744:17,209,285...17,241,347
Ensembl chrNW_004624744:17,208,990...17,241,347 		JBrowse link
G Ptafr platelet activating factor receptor enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004624764:11,996,454...12,025,751
Ensembl chrNW_004624764:11,998,657...11,999,685 		JBrowse link
G Scarb1 scavenger receptor class B member 1 enables ISO (PMID:12651854) BHF-UCL PMID:12651854 NCBI chrNW_004624747:23,970,782...24,010,683
Ensembl chrNW_004624747:23,973,648...24,010,820 		JBrowse link
G Tlr4 toll like receptor 4 enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624760:17,596,516...17,608,955
Ensembl chrNW_004624760:17,598,630...17,609,120 		JBrowse link
lipoteichoic acid immune receptor activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd36 CD36 molecule (CD36 blood group) enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004624739:29,341,620...29,441,232
Ensembl chrNW_004624739:29,407,568...29,441,333 		JBrowse link
peptidoglycan immune receptor activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC101719147 peptidoglycan recognition protein 4 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004624885:747,450...760,077
Ensembl chrNW_004624885:748,615...759,133 		JBrowse link
G Pglyrp1 peptidoglycan recognition protein 1 enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624832:7,220,739...7,225,146
Ensembl chrNW_004624832:7,221,064...7,224,615 		JBrowse link
G Pglyrp2 peptidoglycan recognition protein 2 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624901:2,554,303...2,562,436
Ensembl chrNW_004624901:2,554,048...2,561,826 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  molecular_function 16327
    molecular transducer activity 1553
      signaling receptor activity 1553
        pattern recognition receptor activity 26
          lipoarabinomannan immune receptor activity 0
          lipopolysaccharide immune receptor activity 5
          lipoteichoic acid immune receptor activity 1
          peptidoglycan immune receptor activity 3
          polysaccharide immune receptor activity + 1
paths to the root