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ONTOLOGY REPORT - ANNOTATIONS

Term:pattern recognition receptor activity
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Accession:GO:0038187 term browser browse the term
Definition:Combining with a pathogen-associated molecular pattern (PAMP), a structure conserved among microbial species to initiate an innate immune response.
Synonyms:exact_synonym: PRR;   PRR activity
 narrow_synonym: MAMP receptor activity;   PAMP receptor activity;   microbe-associated molecular pattern receptor activity;   pathogen associated molecular pattern receptor activity
 related_synonym: macrophage receptor activity;   signaling pattern recognition receptor activity
 alt_id: GO:0008329
 xref: Wikipedia:Pattern_recognition_receptor

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pattern recognition receptor activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clec4d C-type lectin domain family 4 member D enables ISO (PMID:23911656) UniProt PMID:23911656 NCBI chrNW_004955413:5,267,548...5,276,969
Ensembl chrNW_004955413:5,267,161...5,277,090 		JBrowse link
G Clec4e C-type lectin domain family 4 member E enables ISO (PMID:24101491)
(MGI:3796003|PMID:18490740)
(MGI:4415080|PMID:20008526)		 UniProt PMID:18490740 PMID:20008526 PMID:24101491 MGI:3796003 MGI:4415080 NCBI chrNW_004955413:5,256,523...5,261,385
Ensembl chrNW_004955413:5,256,440...5,262,938 		JBrowse link
G Colec12 collectin subfamily member 12 enables ISO (PMID:11564734) UniProt PMID:11564734 NCBI chrNW_004955402:9,445,419...9,614,956
Ensembl chrNW_004955402:9,468,421...9,614,286 		JBrowse link
G Dhx16 DEAH-box helicase 16 enables ISO (PMID:35263596) UniProt PMID:35263596 NCBI chrNW_004955583:657,425...668,390
Ensembl chrNW_004955583:654,921...668,392 		JBrowse link
G Dmbt1 deleted in malignant brain tumors 1 enables ISO (PMID:19189310) UniProt PMID:19189310 NCBI chrNW_004955477:863,388...899,703 JBrowse link
G Fcn1 ficolin 1 enables ISO (PMID:21037097) UniProt PMID:21037097 NCBI chrNW_004955513:3,690,550...3,697,785
Ensembl chrNW_004955513:3,687,232...3,698,673 		JBrowse link
G Ifih1 interferon induced with helicase C domain 1 enables ISO (PMID:21217758), (PMID:23273991) UniProt PMID:21217758 PMID:23273991 NCBI chrNW_004955449:11,538,869...11,596,502
Ensembl chrNW_004955449:11,538,889...11,593,349 		JBrowse link
G Nlrp6 NLR family pyrin domain containing 6 enables ISO (PMID:31932628), (PMID:33377178), (PMID:34678144)
(MGI:6833928|PMID:34678144)		 UniProt PMID:31932628 PMID:33377178 PMID:34678144 MGI:6833928 NCBI chrNW_004955476:11,755,489...11,762,781 JBrowse link
G Nod1 nucleotide binding oligomerization domain containing 1 enables ISO (PMID:11058605), (PMID:12791997), (PMID:12796777), (PMID:12871942), (PMID:23300079), (PMID:31649195), (PMID:33942347)
(MGI:6210191|PMID:27007849), (PMID:18261938)		 UniProt
MGI		 PMID:11058605 PMID:12791997 PMID:12796777 PMID:12871942 PMID:18261938 More... MGI:6210191 NCBI chrNW_004955410:31,681,191...31,725,173
Ensembl chrNW_004955410:31,681,077...31,725,173 		JBrowse link
G Nod2 nucleotide binding oligomerization domain containing 2 enables ISO (PMID:12871942), (PMID:17355968), (PMID:22857257), (PMID:23300079), (PMID:27748583), (PMID:31649195), (PMID:33942347)
(MGI:6210191|PMID:27007849), (PMID:18261938)
(PMID:22033934)
(MGI:5763542|PMID:25429073)		 UniProt
MGI		 PMID:12871942 PMID:17355968 PMID:18261938 PMID:22033934 PMID:22857257 More... MGI:5763542 MGI:6210191 NCBI chrNW_004955433:8,746,213...8,780,119
Ensembl chrNW_004955433:8,746,004...8,782,710 		JBrowse link
G Rigi RNA sensor RIG-I enables ISO (PMID:19576794), (PMID:25119032), (PMID:28469175), (PMID:35263596) UniProt PMID:19576794 PMID:25119032 PMID:28469175 PMID:35263596 NCBI chrNW_004955472:3,093,895...3,135,524
Ensembl chrNW_004955472:3,093,939...3,133,987 		JBrowse link
G Tlr2 toll like receptor 2 enables ISO (PMID:10384090)
(PMID:22033934)		 UniProt
MGI		 PMID:10384090 PMID:22033934 NCBI chrNW_004955471:8,011,710...8,019,063
Ensembl chrNW_004955471:8,014,910...8,017,258 		JBrowse link
G Tlr3 toll like receptor 3 enables ISO (PMID:16720699), (PMID:17128265)
(PMID:16260493)
(PMID:12855817)		 UniProt
MGI		 PMID:12855817 PMID:16260493 PMID:16720699 PMID:17128265 NCBI chrNW_004955403:22,977,882...23,001,392
Ensembl chrNW_004955403:22,979,120...23,001,467 		JBrowse link
G Tlr5 toll like receptor 5 enables ISO (PMID:14625549), (PMID:17128265) UniProt PMID:14625549 PMID:17128265 NCBI chrNW_004955520:1,544,840...1,562,081
Ensembl chrNW_004955520:1,556,523...1,559,093 		JBrowse link
G Tlr9 toll like receptor 9 enables ISO (PMID:14716310), (PMID:17128265) BHF-UCL PMID:14716310 PMID:17128265 NCBI chrNW_004955532:3,828,645...3,832,699
Ensembl chrNW_004955532:3,828,775...3,832,582 		JBrowse link
lipopolysaccharide immune receptor activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd14 CD14 molecule enables ISO (PMID:15294986) AgBase PMID:15294986 NCBI chrNW_004955418:73,736...75,345
Ensembl chrNW_004955418:73,897...75,224 		JBrowse link
G Ly96 lymphocyte antigen 96 enables ISO (PMID:19252480) UniProt PMID:19252480 NCBI chrNW_004955444:6,356,121...6,387,350
Ensembl chrNW_004955444:6,356,154...6,387,529 		JBrowse link
G Ptafr platelet activating factor receptor enables ISO (PMID:9013981) MGI PMID:9013981 NCBI chrNW_004955452:7,309,854...7,345,579
Ensembl chrNW_004955452:7,311,901...7,312,929 		JBrowse link
G Scarb1 scavenger receptor class B member 1 enables ISO (PMID:12651854) BHF-UCL PMID:12651854 NCBI chrNW_004955482:4,813,502...4,836,479
Ensembl chrNW_004955482:4,813,955...4,837,392 		JBrowse link
G Tlr4 toll like receptor 4 enables ISO (PMID:19252480)
(MGI:5913054|PMID:28098138), (PMID:16260493), (PMID:18261938)		 UniProt PMID:16260493 PMID:18261938 PMID:19252480 PMID:28098138 MGI:5913054 NCBI chrNW_004955419:10,190,937...10,201,896
Ensembl chrNW_004955419:10,191,120...10,202,135 		JBrowse link
lipoteichoic acid immune receptor activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd36 CD36 molecule (CD36 blood group) enables ISO (PMID:16061696) MGI PMID:16061696 NCBI chrNW_004955410:5,003,720...5,120,903
Ensembl chrNW_004955410:5,003,668...5,075,313 		JBrowse link
peptidoglycan immune receptor activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pglyrp1 peptidoglycan recognition protein 1 enables ISO (PMID:11461926) UniProt PMID:11461926 NCBI chrNW_004955574:424,046...427,675
Ensembl chrNW_004955574:424,142...427,540 		JBrowse link
G Pglyrp2 peptidoglycan recognition protein 2 enables ISO (PMID:11461926) UniProt PMID:11461926 NCBI chrNW_004955495:7,785,398...7,792,158
Ensembl chrNW_004955495:7,785,193...7,796,210 		JBrowse link
G Pglyrp4 peptidoglycan recognition protein 4 enables ISO (PMID:11461926) UniProt PMID:11461926 NCBI chrNW_004955592:100,022...111,609
Ensembl chrNW_004955592:100,088...111,610 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  molecular_function 14339
    molecular transducer activity 647
      signaling receptor activity 647
        pattern recognition receptor activity 24
          lipoarabinomannan immune receptor activity 0
          lipopolysaccharide immune receptor activity 5
          lipoteichoic acid immune receptor activity 1
          peptidoglycan immune receptor activity 3
          polysaccharide immune receptor activity + 0
paths to the root