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Pathways
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ONTOLOGY REPORT - ANNOTATIONS

Term:bile acid signaling pathway
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Accession:GO:0038183 term browser browse the term
Definition:The series of molecular signals initiated by bile acid binding to its receptor, and ending with the regulation of a downstream cellular process, e.g. transcription.


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bile acid signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcb11 ATP binding cassette subfamily B member 11 IEP RGD PMID:27090119 RGD:15090804 NCBI chr 3:54,016,854...54,112,797
Ensembl chr 3:54,017,127...54,112,730 		JBrowse link
G Abcc2 ATP binding cassette subfamily C member 2 IEP RGD PMID:27090119 RGD:15090804 NCBI chr 1:242,664,657...242,723,239
Ensembl chr 1:242,664,657...242,723,238 		JBrowse link
G Abcc4 ATP binding cassette subfamily C member 4 IEP RGD PMID:30223280 RGD:15045612 NCBI chr15:95,541,186...95,774,898
Ensembl chr15:95,542,315...95,774,283 		JBrowse link
G Abcg5 ATP binding cassette subfamily G member 5 IEP RGD PMID:25263431 RGD:15045610 NCBI chr 6:9,965,118...9,990,563
Ensembl chr 6:9,965,118...9,990,563 		JBrowse link
G Abcg8 ATP binding cassette subfamily G member 8 IEP RGD PMID:25263431 RGD:15045610 NCBI chr 6:9,945,629...9,964,912
Ensembl chr 6:9,945,629...9,964,912 		JBrowse link
G Acat2 acetyl-CoA acetyltransferase 2 IEP RGD PMID:25263431 RGD:15045610 NCBI chr 1:47,695,833...47,713,879
Ensembl chr 1:47,695,788...47,752,821 		JBrowse link
G Aldh1l1 aldehyde dehydrogenase 1 family, member L1 IEP RGD PMID:30223280 RGD:15045612 NCBI chr 4:123,059,989...123,106,471
Ensembl chr 4:123,060,008...123,106,465 		JBrowse link
G Cideb cell death-inducing DFFA-like effector b IEP RGD PMID:25263431 RGD:15045610 NCBI chr15:29,252,203...29,256,759
Ensembl chr15:29,252,213...29,256,605 		JBrowse link
G Cyp7a1 cytochrome P450 family 7 subfamily A member 1 IEP RGD PMID:30223280 RGD:15045612 NCBI chr 5:19,376,979...19,386,676
Ensembl chr 5:19,376,974...19,386,688 		JBrowse link
G Cyp8b1 cytochrome P450 family 8 subfamily B member 1 IEP RGD PMID:25263431 RGD:15045610 NCBI chr 8:121,578,123...121,580,093
Ensembl chr 8:121,557,062...121,580,166 		JBrowse link
G Dgat2 diacylglycerol O-acyltransferase 2 IEP RGD PMID:25263431 RGD:15045610 NCBI chr 1:153,454,078...153,484,432
Ensembl chr 1:153,454,080...153,484,428 		JBrowse link
G Hmgcr 3-hydroxy-3-methylglutaryl-CoA reductase IEP RGD PMID:25263431 RGD:15045610 NCBI chr 2:27,997,523...28,018,983
Ensembl chr 2:27,997,525...28,019,703 		JBrowse link
G Nr1h3 nuclear receptor subfamily 1, group H, member 3 IEP RGD PMID:25263431 RGD:15045610 NCBI chr 3:77,158,808...77,168,907
Ensembl chr 3:77,158,808...77,168,722 		JBrowse link
G Nr1h4 nuclear receptor subfamily 1, group H, member 4 involved_in IEP
IEA
IMP
IDA
IBA
ISO		 GO_REF:0000002
PMID:21873635
(MGI:5306122|PMID:21757002)		 InterPro
RGD		 PMID:21757002 PMID:30223280 PMID:25263431 PMID:29138817 PMID:30068870 More... GO_REF:0000002 MGI:5306122, RGD:15045612, RGD:15045610, RGD:15042871, RGD:15042870, RGD:15042872, RGD:15042882, RGD:15092071, RGD:15090804, RGD:13792537 NCBI chr 7:23,846,122...23,942,085
Ensembl chr 7:23,846,122...23,942,047 		JBrowse link
G Nr1h5 nuclear receptor subfamily 1, group H, member 5 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:190,461,036...190,481,420
Ensembl chr 2:190,462,256...190,481,211 		JBrowse link
G Prkaa1 protein kinase AMP-activated catalytic subunit alpha 1 IEP RGD PMID:27090119 RGD:15090804 NCBI chr 2:54,240,298...54,275,978
Ensembl chr 2:54,240,137...54,275,978 		JBrowse link
G Slc10a1 solute carrier family 10 member 1 IEP RGD PMID:27090119 RGD:15090804 NCBI chr 6:100,613,045...100,626,670
Ensembl chr 6:100,613,045...100,626,670 		JBrowse link
G Slco1a4 solute carrier organic anion transporter family, member 1a4 IEP RGD PMID:27090119 RGD:15090804 NCBI chr 4:174,710,004...174,764,810
Ensembl chr 4:174,710,004...175,254,573 		JBrowse link
G Vdr vitamin D receptor involved_in IEA
ISO		 GO_REF:0000107
(PMID:12016314)		 Ensembl
RGD		 PMID:12016314 GO_REF:0000107 NCBI chr 7:128,987,981...129,037,677
Ensembl chr 7:128,987,981...129,037,677 		JBrowse link
cell surface bile acid receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gpbar1 G protein-coupled bile acid receptor 1 involved_in ISO (PMID:12419312), (PMID:12524422) RGD PMID:12419312 PMID:12524422 NCBI chr 9:75,862,151...75,863,140
Ensembl chr 9:75,860,677...75,863,168 		JBrowse link
intracellular bile acid receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nr1h4 nuclear receptor subfamily 1, group H, member 4 involved_in IDA
ISO
IEA		 PMID:10334992
(PMID:10334992)
GO_REF:0000107		 RGD
Ensembl		 PMID:10334992 PMID:10334992 GO_REF:0000107, RGD:15090836 NCBI chr 7:23,846,122...23,942,085
Ensembl chr 7:23,846,122...23,942,047 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19746
    cellular process 18159
      signal transduction 7033
        bile acid signaling pathway 20
          cell surface bile acid receptor signaling pathway 1
          intracellular bile acid receptor signaling pathway 1
Path 2
Term Annotations click to browse term
  biological_process 19746
    biological regulation 13447
      regulation of biological process 13040
        signaling 7556
          signal transduction 7033
            bile acid signaling pathway 20
              cell surface bile acid receptor signaling pathway 1
              intracellular bile acid receptor signaling pathway 1
paths to the root