Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

ONTOLOGY REPORT - ANNOTATIONS

Term:collagen-activated tyrosine kinase receptor signaling pathway
go back to main search page
Accession:GO:0038063 term browser browse the term
Definition:The series of molecular signals initiated by collagen binding to its receptor on the surface of a target cell where the receptor possesses tyrosine kinase activity, and ending with the regulation of a downstream cellular process, e.g. transcription.
Synonyms:exact_synonym: collagen-activated RTK signaling pathway;   collagen-activated tyrosine kinase receptor signalling pathway
 narrow_synonym: DDR signaling pathway;   discoidin domain receptor signaling pathway
 never_in_taxon: NCBITaxon:4751 ! Fungi


show annotations for term's descendants           Sort by:
collagen-activated tyrosine kinase receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Col1a1 collagen type I alpha 1 chain acts_upstream_of_or_within IDA PMID:10970885 MGI PMID:10970885 RGD:11079513 NCBI chr10:79,883,622...79,900,625
Ensembl chr10:79,883,622...79,900,624 		JBrowse link
G Col4a1 collagen type IV alpha 1 chain acts_upstream_of_or_within ISO MGI:104688|MGI:2152695|MGI:88455|MGI:88456 (PMID:10970885) RGD PMID:10970885 NCBI chr16:78,183,533...78,294,412
Ensembl chr16:78,183,533...78,294,412 		JBrowse link
G Col4a2 collagen type IV alpha 2 chain involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
MGI:104688|MGI:2152695|MGI:88456|MGI:88467 (PMID:10970885)		 GO_Central
RGD		 PMID:10970885 GO_REF:0000033 NCBI chr16:78,047,591...78,183,360
Ensembl chr16:78,047,602...78,183,839 		JBrowse link
G Col4a3 collagen type IV alpha 3 chain acts_upstream_of_or_within ISO MGI:2152695|MGI:88455|MGI:88456|MGI:88467 (PMID:10970885) RGD PMID:10970885 NCBI chr 9:83,875,849...84,004,955
Ensembl chr 9:83,875,561...84,001,895 		JBrowse link
G Col4a4 collagen type IV alpha 4 chain involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr 9:83,833,173...83,875,436
Ensembl chr 9:83,755,515...83,875,876 		JBrowse link
G Col4a5 collagen type IV alpha 5 chain acts_upstream_of_or_within ISO MGI:104688|MGI:2152695|MGI:88455|MGI:88467 (PMID:10970885) RGD PMID:10970885 NCBI chr  X:105,118,762...105,322,699
Ensembl chr  X:105,118,820...105,322,692 		JBrowse link
G Col4a6 collagen type IV alpha 6 chain involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
MGI:104688|MGI:88455|MGI:88456|MGI:88467 (PMID:10970885)		 GO_Central
RGD		 PMID:10970885 GO_REF:0000033 NCBI chr  X:104,766,463...105,117,499
Ensembl chr  X:104,766,957...105,117,500 		JBrowse link
G Col7a1 collagen type VII alpha 1 chain involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr 8:109,604,877...109,637,249
Ensembl chr 8:109,604,861...109,637,252 		JBrowse link
G Ddr1 discoidin domain receptor tyrosine kinase 1 involved_in
acts_upstream_of_or_within		 ISO
ISS
IEP
IEA		 (PMID:12065315), (PMID:21044884), (PMID:9659899)
GO_REF:0000024
(MGI:3629583|PMID:12065315)
GO_REF:0000117
(PMID:10970885)		 RGD
UniProt		 PMID:9659899 PMID:10970885 PMID:12065315 PMID:21044884 PMID:28199848 GO_REF:0000024 GO_REF:0000117 MGI:3629583, RGD:151347403 NCBI chr20:3,042,494...3,064,442
Ensembl chr20:3,044,320...3,064,468 		JBrowse link
G Ddr2 discoidin domain receptor tyrosine kinase 2 involved_in ISO (PMID:16186108)
(MGI:2158097|PMID:11723120)		 RGD PMID:11723120 PMID:16186108 MGI:2158097 NCBI chr13:82,193,623...82,318,229
Ensembl chr13:82,195,463...82,317,363 		JBrowse link
G Gp6 glycoprotein VI acts_upstream_of_or_within ISO (PMID:27609517), (PMID:28032533) RGD PMID:27609517 PMID:28032533 NCBI chr 1:69,429,232...69,492,709
Ensembl chr 1:69,465,789...69,491,326 		JBrowse link
G Syk spleen associated tyrosine kinase involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:27609517)		 Ensembl
RGD		 PMID:27609517 GO_REF:0000107 NCBI chr17:12,604,615...12,678,437
Ensembl chr17:12,604,619...12,661,410 		JBrowse link
G Tspan9 tetraspanin 9 acts_upstream_of_or_within ISO MGI:4027164 (PMID:28032533) RGD PMID:28032533 NCBI chr 4:160,813,879...160,995,574
Ensembl chr 4:160,813,879...160,995,501 		JBrowse link
G Ubash3b ubiquitin associated and SH3 domain containing, B involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
MGI:2670555 (PMID:27609517)		 GO_Central
RGD		 PMID:27609517 GO_REF:0000033 NCBI chr 8:41,385,419...41,532,248
Ensembl chr 8:41,388,341...41,532,201 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20413
    cellular process 18812
      signal transduction 7209
        cell surface receptor signaling pathway 2886
          collagen-activated signaling pathway 20
            collagen-activated tyrosine kinase receptor signaling pathway 14
Path 2
Term Annotations click to browse term
  biological_process 20413
    biological regulation 13755
      regulation of biological process 13322
        regulation of cellular process 12748
          signal transduction 7209
            cell surface receptor signaling pathway 2886
              enzyme-linked receptor protein signaling pathway 1053
                cell surface receptor protein tyrosine kinase signaling pathway 664
                  collagen-activated tyrosine kinase receptor signaling pathway 14
paths to the root