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ONTOLOGY REPORT - ANNOTATIONS


Term:synaptic vesicle recycling
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Accession:GO:0036465 term browser browse the term
Definition:The trafficking of synaptic vesicles from the pre-synaptic membrane so the vesicle can dock and prime for another round of exocytosis and neurotransmitter release. Recycling occurs after synaptic vesicle exocytosis, and is necessary to replenish presynaptic vesicle pools, sustain transmitter release and preserve the structural integrity of the presynaptic membrane. Recycling can occur following transient fusion with the presynaptic membrane (kiss and run), or via endocytosis of presynaptic membrane.
Synonyms:narrow_synonym: kiss-and-run synaptic vesicle recycling;   kiss-and-stay synaptic vesicle recycling



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synaptic vesicle recycling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ap1s2 adaptor related protein complex 1 subunit sigma 2 acts_upstream_of_or_within ISO MGI:5620801 (MGI:5617942|PMID:20203623) RGD PMID:20203623 MGI:5617942 NCBI chr  X:30,572,746...30,598,961
Ensembl chr  X:30,572,751...30,597,262
JBrowse link
G Rab3a RAB3A, member RAS oncogene family involved_in IMP PMID:16141272 ParkinsonsUK-UCL PMID:16141272 RGD:8693376 NCBI chr16:18,684,185...18,688,297
Ensembl chr16:18,684,188...18,688,336
JBrowse link
G Rab5a RAB5A, member RAS oncogene family involved_in ISO (PMID:16141272) RGD PMID:16141272 NCBI chr 9:6,483,906...6,512,877
Ensembl chr 9:6,484,469...6,512,873
JBrowse link
G Syt7 synaptotagmin 7 involved_in ISS
ISO
GO_REF:0000024
(MGI:5560382|PMID:24569478)
UniProt
RGD
PMID:24569478 GO_REF:0000024 MGI:5560382 NCBI chr 1:207,031,369...207,093,787
Ensembl chr 1:207,031,592...207,089,026
JBrowse link
clathrin-dependent synaptic vesicle endocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Btbd8 BTB domain containing 8 involved_in ISS
ISO
IEA
GO_REF:0000024
(MGI:6104538|PMID:29262337)
GO_REF:0000002
UniProt
RGD
InterPro
PMID:29262337 GO_REF:0000002 GO_REF:0000024 MGI:6104538 NCBI chr14:2,265,189...2,338,426
Ensembl chr14:2,266,454...2,334,393
JBrowse link
G Itsn1 intersectin 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr11:30,978,590...31,160,645
Ensembl chr11:30,978,590...31,160,645
JBrowse link
G Itsn2 intersectin 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:27,616,645...27,727,373
Ensembl chr 6:27,600,406...27,727,124
JBrowse link
negative regulation of synaptic vesicle endocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Syt11 synaptotagmin 11 involved_in IMP PMID:26589353 ParkinsonsUK-UCL PMID:26589353 RGD:11079192 NCBI chr 2:174,206,032...174,232,540
Ensembl chr 2:174,206,191...174,231,964
JBrowse link
negative regulation of synaptic vesicle recycling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cyfip1 cytoplasmic FMR1 interacting protein 1 IMP RGD PMID:26843638 RGD:11342679 NCBI chr 1:106,710,924...106,799,393
Ensembl chr 1:106,711,016...106,799,386
JBrowse link
G Stx1b syntaxin 1B involved_in ISO (MGI:5603022|PMID:24587181) RGD PMID:24587181 MGI:5603022 NCBI chr 1:182,415,544...182,434,385
Ensembl chr 1:182,415,546...182,441,280
JBrowse link
positive regulation of synaptic vesicle endocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca13 ATP binding cassette subfamily A member 13 involved_in ISO (MGI:6694370|PMID:33478937) RGD PMID:33478937 MGI:6694370 NCBI chr14:83,873,397...84,376,138
Ensembl chr14:83,873,940...84,375,075
JBrowse link
G Ap2m1 adaptor related protein complex 2 subunit mu 1 IMP RGD PMID:19762466 RGD:13461856 NCBI chr11:80,355,307...80,364,218
Ensembl chr11:80,328,041...80,364,140
JBrowse link
G Bcl2l1 Bcl2-like 1 involved_in IMP PMID:23792689 CAFA PMID:23792689 RGD:12793033 NCBI chr 3:141,253,508...141,304,582
Ensembl chr 3:141,253,523...141,303,479
JBrowse link
G Dnm1 dynamin 1 IMP RGD PMID:17437541 RGD:8554440 NCBI chr 3:15,604,782...15,648,654
Ensembl chr 3:15,604,784...15,648,538
JBrowse link
G Dnm1l dynamin 1-like involved_in IMP PMID:23792689 CAFA PMID:23792689 RGD:12793033 NCBI chr11:84,581,216...84,632,382
Ensembl chr11:84,581,216...84,631,482
JBrowse link
G Lrrk2 leucine-rich repeat kinase 2 IMP RGD PMID:18445495 RGD:13462049 NCBI chr 7:122,826,712...122,987,711
Ensembl chr 7:122,826,696...122,987,703
JBrowse link
G Mff mitochondrial fission factor involved_in IMP PMID:23792689 CAFA PMID:23792689 RGD:12793033 NCBI chr 9:84,007,798...84,036,039
Ensembl chr 9:84,007,798...84,036,039
JBrowse link
G Nlgn1 neuroligin 1 involved_in IMP
ISO
PMID:19628693
(MGI:4355770|PMID:19628693)
RGD PMID:19628693 PMID:19628693 MGI:4355770, RGD:8554760 NCBI chr 2:108,256,236...109,181,530
Ensembl chr 2:108,257,824...109,002,464
JBrowse link
G Picalm phosphatidylinositol binding clathrin assembly protein IMP RGD PMID:21808019 RGD:13506237 NCBI chr 1:144,056,415...144,138,045
Ensembl chr 1:144,056,721...144,137,557
JBrowse link
G Ppp3cc protein phosphatase 3 catalytic subunit gamma IMP RGD PMID:26627835 RGD:11532172 NCBI chr15:45,289,917...45,362,012
Ensembl chr15:45,290,373...45,361,832
JBrowse link
G Sh3gl1 SH3 domain containing GRB2 like 1, endophilin A2 IMP RGD PMID:14532001 RGD:13464359 NCBI chr 9:842,285...869,753
Ensembl chr 9:842,288...869,716
JBrowse link
G Snap91 synaptosome associated protein 91 IMP RGD PMID:21808019 RGD:13506237 NCBI chr 8:87,738,056...87,852,690
Ensembl chr 8:87,738,824...87,852,367
JBrowse link
G Tor1a torsin family 1, member A involved_in ISS
ISO
GO_REF:0000024
(PMID:21102408)
UniProt
RGD
PMID:21102408 GO_REF:0000024 NCBI chr 3:14,250,667...14,257,704
Ensembl chr 3:14,250,676...14,257,691
JBrowse link
positive regulation of synaptic vesicle recycling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dnm1 dynamin 1 IMP RGD PMID:17880892 RGD:8553820 NCBI chr 3:15,604,782...15,648,654
Ensembl chr 3:15,604,784...15,648,538
JBrowse link
G Dnm3 dynamin 3 IMP RGD PMID:23687302 RGD:13462065 NCBI chr13:74,359,043...74,838,135
Ensembl chr13:74,359,213...74,838,108
JBrowse link
G Pclo piccolo (presynaptic cytomatrix protein) IMP RGD PMID:31074746 RGD:41408338 NCBI chr 4:19,691,439...20,050,015
Ensembl chr 4:19,695,315...20,049,885
JBrowse link
G Plaa phospholipase A2, activating protein involved_in ISS
ISO
GO_REF:0000024
(MGI:5883825|PMID:28413018)
UniProt
RGD
PMID:28413018 GO_REF:0000024 MGI:5883825 NCBI chr 5:109,428,600...109,460,373
Ensembl chr 5:109,428,265...109,460,282
JBrowse link
regulation of recycling endosome localization within postsynapse term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gripap1 GRIP1 associated protein 1 involved_in IMP
IDA
IBA
PMID:20098723
PMID:21873635
SynGO
GO_Central
PMID:20098723 PMID:20098723 PMID:21873635 RGD:12050105, RGD:12050105, RGD:13792537 NCBI chr  X:14,678,896...14,708,747
Ensembl chr  X:14,678,898...14,708,679
JBrowse link
regulation of synaptic vesicle budding from presynaptic endocytic zone membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc2a4 solute carrier family 2 member 4 involved_in IMP
IDA
PMID:28111082 SynGO PMID:28111082 PMID:28111082 RGD:13702195, RGD:13702195 NCBI chr10:54,666,015...54,671,581
Ensembl chr10:54,666,015...54,671,565
JBrowse link
regulation of synaptic vesicle endocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Btbd9 BTB domain containing 9 acts_upstream_of_or_within ISO MGI:4127237 (MGI:5438074|PMID:22536397) RGD PMID:22536397 MGI:5438074 NCBI chr20:8,286,337...8,645,567
Ensembl chr20:8,288,711...8,643,960
JBrowse link
G Calm1 calmodulin 1 involved_in IMP PMID:23792689 CAFA PMID:23792689 RGD:12793033 NCBI chr 6:119,487,691...119,495,759
Ensembl chr 6:119,487,621...119,498,227
JBrowse link
G Calm2 calmodulin 2 involved_in IMP PMID:23792689 CAFA PMID:23792689 RGD:12793033 NCBI chr 6:7,091,624...7,104,284
Ensembl chr 6:7,091,567...7,104,287
JBrowse link
G Calm3 calmodulin 3 involved_in IMP PMID:23792689 CAFA PMID:23792689 RGD:12793033 NCBI chr 1:77,590,668...77,597,776
Ensembl chr 1:77,589,230...77,592,207
JBrowse link
G Dgkq diacylglycerol kinase, theta involved_in ISO (MGI:5807028|PMID:26748701) RGD PMID:26748701 MGI:5807028 NCBI chr14:1,059,125...1,073,131
Ensembl chr14:1,059,170...1,073,131
JBrowse link
G Dnm1 dynamin 1 IMP RGD PMID:16648848 RGD:13504740 NCBI chr 3:15,604,782...15,648,654
Ensembl chr 3:15,604,784...15,648,538
JBrowse link
G Lrrk2 leucine-rich repeat kinase 2 involved_in ISO (MGI:6189511|PMID:25501810) RGD PMID:25501810 MGI:6189511 NCBI chr 7:122,826,712...122,987,711
Ensembl chr 7:122,826,696...122,987,703
JBrowse link
G Picalm phosphatidylinositol binding clathrin assembly protein IMP RGD PMID:18842885 RGD:8554167 NCBI chr 1:144,056,415...144,138,045
Ensembl chr 1:144,056,721...144,137,557
JBrowse link
G Pip5k1c phosphatidylinositol-4-phosphate 5-kinase type 1 gamma involved_in ISO (MGI:3054280|PMID:15386003) RGD PMID:15386003 MGI:3054280 NCBI chr 7:8,397,406...8,426,030
Ensembl chr 7:8,397,406...8,425,988
JBrowse link
G Ppp3cb protein phosphatase 3 catalytic subunit beta involved_in IEA
ISO
GO_REF:0000107
(MGI:4830393|PMID:20810903)
Ensembl
RGD
PMID:20810903 GO_REF:0000107 MGI:4830393 NCBI chr15:3,759,950...3,804,976
Ensembl chr15:3,760,030...3,804,981
JBrowse link
G Ppp3cc protein phosphatase 3 catalytic subunit gamma involved_in IMP
IDA
PMID:26627835 SynGO PMID:26627835 PMID:26627835 RGD:11532172, RGD:11532172 NCBI chr15:45,289,917...45,362,012
Ensembl chr15:45,290,373...45,361,832
JBrowse link
G Rock1 Rho-associated coiled-coil containing protein kinase 1 involved_in IEA
ISO
GO_REF:0000107
UniProtKB:O60890 (PMID:27160703)
Ensembl
RGD
PMID:27160703 GO_REF:0000107 NCBI chr18:1,114,532...1,236,345
Ensembl chr18:1,115,905...1,235,571
JBrowse link
G Scamp5 secretory carrier membrane protein 5 involved_in IDA
IMP
PMID:25057210 SynGO PMID:25057210 PMID:25057210 RGD:13702419, RGD:13702419 NCBI chr 8:57,845,831...57,884,516
Ensembl chr 8:57,846,659...57,872,027
JBrowse link
G Sh3gl1 SH3 domain containing GRB2 like 1, endophilin A2 IMP RGD PMID:22750032 RGD:13463484 NCBI chr 9:842,285...869,753
Ensembl chr 9:842,288...869,716
JBrowse link
G Slc17a7 solute carrier family 17 member 7 IMP RGD PMID:16815333 RGD:13504741 NCBI chr 1:95,649,709...95,661,591
Ensembl chr 1:95,649,745...95,661,588
JBrowse link
G Snap91 synaptosome associated protein 91 IMP RGD PMID:18842885 RGD:8554167 NCBI chr 8:87,738,056...87,852,690
Ensembl chr 8:87,738,824...87,852,367
JBrowse link
G Syt7 synaptotagmin 7 involved_in ISO (MGI:6189675|PMID:14532108) RGD PMID:14532108 MGI:6189675 NCBI chr 1:207,031,369...207,093,787
Ensembl chr 1:207,031,592...207,089,026
JBrowse link
G Vamp4 vesicle-associated membrane protein 4 involved_in IDA
EXP
IMP
PMID:26607000 SynGO PMID:26607000 PMID:26607000 PMID:26607000 RGD:11058152, RGD:11058152, RGD:11058152 NCBI chr13:74,919,872...74,942,791
Ensembl chr13:74,919,880...74,933,686
JBrowse link
regulation of synaptic vesicle recycling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgf14 fibroblast growth factor 14 acts_upstream_of_or_within IMP PMID:23831029 MGI PMID:23831029 RGD:10047342 NCBI chr15:101,045,038...101,679,888
Ensembl chr15:101,045,036...101,679,900
JBrowse link
G Vamp2 vesicle-associated membrane protein 2 IMP RGD PMID:21808019 RGD:13506237 NCBI chr10:53,793,581...53,797,815
Ensembl chr10:53,793,923...53,797,809
JBrowse link
synaptic vesicle budding from endosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ap1s2 adaptor related protein complex 1 subunit sigma 2 involved_in ISO (MGI:5617942|PMID:20203623) RGD PMID:20203623 MGI:5617942 NCBI chr  X:30,572,746...30,598,961
Ensembl chr  X:30,572,751...30,597,262
JBrowse link
G Ap3b1 adaptor related protein complex 3 subunit beta 1 involved_in ISO (MGI:6189637|PMID:11588176) RGD PMID:11588176 MGI:6189637 NCBI chr 2:25,600,069...25,800,937
Ensembl chr 2:25,600,040...25,800,935
JBrowse link
G Ap3d1 adaptor related protein complex 3 subunit delta 1 involved_in IDA
ISO
IMP
IBA
PMID:22539861
(MGI:6189637|PMID:11588176)
PMID:21873635
RGD PMID:11588176 PMID:22539861 PMID:22539861 PMID:21873635 MGI:6189637, RGD:12050120, RGD:12050120, RGD:13792537 NCBI chr 7:8,970,249...9,005,651
Ensembl chr 7:8,970,291...9,005,643
JBrowse link
G Btbd8 BTB domain containing 8 involved_in ISO (MGI:6104538|PMID:29262337) RGD PMID:29262337 MGI:6104538 NCBI chr14:2,265,189...2,338,426
Ensembl chr14:2,266,454...2,334,393
JBrowse link
synaptic vesicle budding from presynaptic endocytic zone membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dnm1 dynamin 1 involved_in ISO UniProtKB:Q8BZ98 (MGI:5285027|PMID:21689597) RGD PMID:21689597 MGI:5285027 NCBI chr 3:15,604,782...15,648,654
Ensembl chr 3:15,604,784...15,648,538
JBrowse link
G Dnm3 dynamin 3 involved_in ISO UniProtKB:P39053 (MGI:5285027|PMID:21689597) RGD PMID:21689597 MGI:5285027 NCBI chr13:74,359,043...74,838,135
Ensembl chr13:74,359,213...74,838,108
JBrowse link
G Eps15 epidermal growth factor receptor pathway substrate 15 involved_in IC PMID:21832070 SynGO PMID:21832070 RGD:9685531 NCBI chr 5:124,045,865...124,146,221
Ensembl chr 5:124,045,926...124,146,221
JBrowse link
G Picalm phosphatidylinositol binding clathrin assembly protein involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:144,056,415...144,138,045
Ensembl chr 1:144,056,721...144,137,557
JBrowse link
G Snap91 synaptosome associated protein 91 involved_in IBA
ISO
PMID:21873635
(MGI:5707086|PMID:26412491)
RGD PMID:26412491 PMID:21873635 MGI:5707086, RGD:13792537 NCBI chr 8:87,738,056...87,852,690
Ensembl chr 8:87,738,824...87,852,367
JBrowse link
synaptic vesicle coating term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cltb clathrin, light chain B involved_in NAS PMID:3563513 UniProt PMID:3563513 RGD:70686 NCBI chr17:10,001,512...10,019,201
Ensembl chr17:10,001,513...10,019,169
JBrowse link
synaptic vesicle endocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actb actin, beta involved_in IEA
ISO
GO_REF:0000107
(MGI:6189485|PMID:27840001)
Ensembl
RGD
PMID:27840001 GO_REF:0000107 MGI:6189485 NCBI chr12:11,663,112...11,666,697
Ensembl chr12:11,663,109...11,672,877
JBrowse link
G Actg1 actin, gamma 1 involved_in ISO (MGI:6189485|PMID:27840001) RGD PMID:27840001 MGI:6189485 NCBI chr10:105,619,738...105,622,587
Ensembl chr10:105,619,737...105,624,232
JBrowse link
G Amph amphiphysin involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:2388118 (MGI:2176305|PMID:11879655)
RGD PMID:11879655 PMID:21873635 MGI:2176305, RGD:13792537 NCBI chr17:45,739,385...45,982,905
Ensembl chr17:45,739,395...45,983,315
JBrowse link
G Ap2b1 adaptor related protein complex 2 subunit beta 1 involved_in ISO (PMID:11102472) RGD PMID:11102472 NCBI chr10:68,099,397...68,205,023
Ensembl chr10:68,099,547...68,205,013
JBrowse link
G Ap2m1 adaptor related protein complex 2 subunit mu 1 involved_in IMP
IDA
PMID:19321783 SynGO PMID:19321783 PMID:19321783 RGD:12050109, RGD:12050109 NCBI chr11:80,355,307...80,364,218
Ensembl chr11:80,328,041...80,364,140
JBrowse link
G Arf6 ADP-ribosylation factor 6 involved_in IDA
IMP
PMID:26731518 SynGO PMID:26731518 PMID:26731518 RGD:11556875, RGD:11556875 NCBI chr 6:87,853,742...87,854,890
Ensembl chr 6:87,840,142...87,874,114
JBrowse link
G Bin1 bridging integrator 1 involved_in IMP
IDA
PMID:9348539 SynGO PMID:9348539 PMID:9348539 RGD:631926, RGD:631926 NCBI chr18:24,009,731...24,067,267
Ensembl chr18:24,009,653...24,067,263
JBrowse link
G Btbd8 BTB domain containing 8 involved_in ISO (MGI:6104538|PMID:29262337) RGD PMID:29262337 MGI:6104538 NCBI chr14:2,265,189...2,338,426
Ensembl chr14:2,266,454...2,334,393
JBrowse link
G Canx calnexin involved_in ISS
ISO
GO_REF:0000024
(MGI:5288282|PMID:21747946)
UniProt
RGD
PMID:21747946 GO_REF:0000024 MGI:5288282 NCBI chr10:34,623,865...34,656,866
Ensembl chr10:34,625,191...34,656,821
JBrowse link
G Cd24 CD24 molecule acts_upstream_of_or_within ISO MGI:2179996 (MGI:3625625|PMID:16606832) RGD PMID:16606832 MGI:3625625 NCBI chr20:47,074,353...47,079,662
Ensembl chr20:47,073,512...47,079,662
JBrowse link
G Cdk5 cyclin-dependent kinase 5 IMP RGD PMID:12855954 RGD:1358501 NCBI chr 4:10,754,682...10,760,110
Ensembl chr 4:10,754,687...10,760,112
JBrowse link
G Cel carboxyl ester lipase involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:11,883,532...11,891,035
Ensembl chr 3:11,883,532...11,891,035
JBrowse link
G Cltc clathrin heavy chain involved_in IMP
IDA
PMID:16982422 SynGO PMID:16982422 PMID:16982422 RGD:13702168, RGD:13702168 NCBI chr10:71,517,661...71,574,591
Ensembl chr10:71,517,663...71,573,737
JBrowse link
G Dennd1a DENN domain containing 1A acts_upstream_of_or_within ISO (MGI:3694831|PMID:17182770) RGD PMID:17182770 MGI:3694831 NCBI chr 3:21,564,749...22,052,057
Ensembl chr 3:21,564,749...22,052,062
JBrowse link
G Dnm1 dynamin 1 involved_in ISO
IBA
(MGI:3709249|PMID:17463283)
PMID:21873635
RGD PMID:17463283 PMID:21873635 MGI:3709249, RGD:13792537 NCBI chr 3:15,604,782...15,648,654
Ensembl chr 3:15,604,784...15,648,538
JBrowse link
G Dnm1l dynamin 1-like involved_in IDA
IMP
PMID:23792689 SynGO PMID:23792689 PMID:23792689 RGD:12793033, RGD:12793033 NCBI chr11:84,581,216...84,632,382
Ensembl chr11:84,581,216...84,631,482
JBrowse link
G Dnm2 dynamin 2 involved_in ISO
IBA
(MGI:5285027|PMID:21689597)
PMID:21873635
RGD PMID:21689597 PMID:21873635 MGI:5285027, RGD:13792537 NCBI chr 8:19,978,313...20,060,162
Ensembl chr 8:19,978,400...20,060,157
JBrowse link
G Dnm3 dynamin 3 involved_in ISO
IBA
(MGI:5285027|PMID:21689597)
PMID:21873635
RGD PMID:21689597 PMID:21873635 MGI:5285027, RGD:13792537 NCBI chr13:74,359,043...74,838,135
Ensembl chr13:74,359,213...74,838,108
JBrowse link
G Fcho2 FCH and mu domain containing endocytic adaptor 2 involved_in IGI
ISO
IBA
PMID:20448150
UniProtKB:D3ZIM5|UniProtKB:D3ZYR1 (MGI:5320276|PMID:20448150)
PMID:21873635
RGD PMID:20448150 PMID:20448150 PMID:21873635 MGI:5320276, RGD:12050101, RGD:13792537 NCBI chr 2:30,079,143...30,181,639
Ensembl chr 2:30,080,962...30,181,241
JBrowse link
G Grn granulin precursor IMP RGD PMID:21813674 RGD:5509044 NCBI chr10:87,387,672...87,393,777
Ensembl chr10:87,387,638...87,393,775
JBrowse link
G Itsn1 intersectin 1 involved_in ISO (MGI:3811659|PMID:18676989) RGD PMID:18676989 MGI:3811659 NCBI chr11:30,978,590...31,160,645
Ensembl chr11:30,978,590...31,160,645
JBrowse link
G LOC100910792 amphiphysin-like involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G Nlgn1 neuroligin 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:108,256,236...109,181,530
Ensembl chr 2:108,257,824...109,002,464
JBrowse link
G Nlgn2 neuroligin 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:54,544,588...54,557,854
Ensembl chr10:54,544,588...54,558,434
JBrowse link
G Nlgn3 neuroligin 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:66,427,926...66,457,378
Ensembl chr  X:66,429,458...66,451,876
JBrowse link
G Ophn1 oligophrenin 1 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:700009 (MGI:4359148|PMID:19481455)
RGD PMID:19481455 PMID:21873635 MGI:4359148, RGD:13792537 NCBI chr  X:63,599,746...63,976,678
Ensembl chr  X:63,603,042...63,976,633
JBrowse link
G Pacsin1 protein kinase C and casein kinase substrate in neurons 1 involved_in IEA
ISO
ISS
GO_REF:0000107
(MGI:5304995|PMID:21926968)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:21926968 GO_REF:0000024 GO_REF:0000107 MGI:5304995 NCBI chr20:5,718,134...5,768,064
Ensembl chr20:5,719,857...5,765,313
JBrowse link
G Picalm phosphatidylinositol binding clathrin assembly protein involved_in IMP
IDA
PMID:21808019 SynGO PMID:21808019 PMID:21808019 RGD:13506237, RGD:13506237 NCBI chr 1:144,056,415...144,138,045
Ensembl chr 1:144,056,721...144,137,557
JBrowse link
G Rab27b RAB27B, member RAS oncogene family involved_in IMP
IDA
PMID:20926670 SynGO PMID:20926670 PMID:20926670 RGD:13432355, RGD:13432355 NCBI chr18:63,597,554...63,794,124
Ensembl chr18:63,600,937...63,757,180
JBrowse link
G RGD1307100 similar to RIKEN cDNA D630029K19 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:119,708,114...119,924,697
Ensembl chr 2:119,708,209...119,924,695
JBrowse link
G Scrib scribble planar cell polarity protein involved_in ISO (MGI:4365512|PMID:19458197) RGD PMID:19458197 MGI:4365512 NCBI chr 7:107,759,343...107,782,364
Ensembl chr 7:107,759,343...107,782,331
JBrowse link
G Sh3gl2 SH3 domain containing GRB2 like 2, endophilin A1 involved_in
acts_upstream_of_or_within
IMP
ISO
IDA
PMID:22099461
MGI:2151070 (MGI:4359148|PMID:19481455)
RGD PMID:19481455 PMID:22099461 PMID:22099461 MGI:4359148, RGD:13702445, RGD:13702445 NCBI chr 5:99,653,189...99,827,500
Ensembl chr 5:99,653,152...100,113,843
JBrowse link
G Snap91 synaptosome associated protein 91 involved_in IDA
IMP
PMID:21808019 SynGO PMID:21808019 PMID:21808019 RGD:13506237, RGD:13506237 NCBI chr 8:87,738,056...87,852,690
Ensembl chr 8:87,738,824...87,852,367
JBrowse link
G Snca synuclein alpha involved_in IBA
ISO
PMID:21873635
(MGI:3850310|PMID:18980610), (MGI:5605098|PMID:25009269)
RGD PMID:18980610 PMID:25009269 PMID:21873635 MGI:3850310 MGI:5605098, RGD:13792537 NCBI chr 4:89,696,420...89,797,240
Ensembl chr 4:89,696,420...89,796,262
JBrowse link
G Sncb synuclein, beta involved_in IBA
ISO
IEA
PMID:21873635
(MGI:5605098|PMID:25009269)
GO_REF:0000107
RGD
Ensembl
PMID:25009269 PMID:21873635 GO_REF:0000107 MGI:5605098, RGD:13792537 NCBI chr17:9,846,802...9,855,013
Ensembl chr17:9,846,802...9,855,012
JBrowse link
G Sncg synuclein, gamma involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:9,700,513...9,705,751
Ensembl chr16:9,700,514...9,705,368
JBrowse link
G Ston1 stonin 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 PMID:21873635 RGD:13792537, RGD:13792537 NCBI chr 6:5,843,186...5,892,557
Ensembl chr 6:5,843,185...5,892,449
JBrowse link
G Ston2 stonin 2 involved_in IMP
IBA
ISS
IDA
ISO
PMID:22727701
PMID:21873635
GO_REF:0000024
UniProtKB:O14656 (PMID:21102408)
UniProt
RGD
PMID:21102408 PMID:22727701 PMID:21873635 PMID:22727701 PMID:21873635 GO_REF:0000024, RGD:12050122, RGD:13792537, RGD:12050122, RGD:13792537 NCBI chr 6:110,567,485...110,676,376
Ensembl chr 6:110,567,485...110,676,376
JBrowse link
G Stx1a syntaxin 1A involved_in ISO (PMID:26635000) RGD PMID:26635000 NCBI chr12:21,641,971...21,670,022
Ensembl chr12:21,641,969...21,669,930
JBrowse link
G Synj1 synaptojanin 1 involved_in
acts_upstream_of_or_within
ISS
ISO
IBA
IEA
GO_REF:0000024
MGI:2179801 (MGI:3797309|PMID:18093523)
PMID:21873635
GO_REF:0000002
UniProtKB:Q8CHC4 (PMID:18093523)
ParkinsonsUK-UCL
RGD
InterPro
PMID:18093523 PMID:21873635 GO_REF:0000002 GO_REF:0000024 MGI:3797309, RGD:13792537 NCBI chr11:30,192,629...30,269,277
Ensembl chr11:30,192,629...30,269,220
JBrowse link
G Synj2 synaptojanin 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:46,518,594...46,621,919
Ensembl chr 1:46,518,709...46,633,687
JBrowse link
G Syp synaptophysin involved_in IEA
ISO
GO_REF:0000107
(MGI:5141572|PMID:21658579)
Ensembl
RGD
PMID:21658579 GO_REF:0000107 MGI:5141572 NCBI chr  X:14,849,444...14,864,553
Ensembl chr  X:14,849,444...14,864,745
JBrowse link
G Syt1 synaptotagmin 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:43,813,204...44,358,020
Ensembl chr 7:43,815,785...44,357,803
JBrowse link
G Syt2 synaptotagmin 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:46,088,046...46,197,976
Ensembl chr13:46,185,282...46,193,859
JBrowse link
G Syt5 synaptotagmin 5 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:69,277,351...69,285,071
Ensembl chr 1:69,277,351...69,285,067
JBrowse link
G Syt8 synaptotagmin 8 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:197,588,126...197,593,598
Ensembl chr 1:197,590,149...197,593,504
JBrowse link
G Tbc1d24 TBC1 domain family, member 24 acts_upstream_of_or_within ISO MGI:5692831 (MGI:6279048|PMID:30335140) RGD PMID:30335140 MGI:6279048 NCBI chr10:13,205,819...13,236,013
Ensembl chr10:13,209,895...13,236,050
JBrowse link
G Vamp2 vesicle-associated membrane protein 2 involved_in ISS
ISO
GO_REF:0000024
(MGI:3573806|PMID:15475946)
UniProt
RGD
PMID:15475946 GO_REF:0000024 MGI:3573806 NCBI chr10:53,793,581...53,797,815
Ensembl chr10:53,793,923...53,797,809
JBrowse link
synaptic vesicle recycling via endosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl2l1 Bcl2-like 1 involved_in IMP PMID:23792689 CAFA PMID:23792689 RGD:12793033 NCBI chr 3:141,253,508...141,304,582
Ensembl chr 3:141,253,523...141,303,479
JBrowse link
G Btbd8 BTB domain containing 8 involved_in ISS
ISO
GO_REF:0000024
(MGI:6104538|PMID:29262337)
UniProt
RGD
PMID:29262337 GO_REF:0000024 MGI:6104538 NCBI chr14:2,265,189...2,338,426
Ensembl chr14:2,266,454...2,334,393
JBrowse link
G Dnm1l dynamin 1-like involved_in IMP PMID:23792689 CAFA PMID:23792689 RGD:12793033 NCBI chr11:84,581,216...84,632,382
Ensembl chr11:84,581,216...84,631,482
JBrowse link
G Tbc1d24 TBC1 domain family, member 24 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:13,205,819...13,236,013
Ensembl chr10:13,209,895...13,236,050
JBrowse link
synaptic vesicle uncoating term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dnajc6 DnaJ heat shock protein family (Hsp40) member C6 involved_in IBA
ISO
PMID:21873635
(MGI:4439191|PMID:20160091)
RGD PMID:20160091 PMID:21873635 MGI:4439191, RGD:13792537 NCBI chr 5:116,120,069...116,283,448
Ensembl chr 5:116,119,676...116,283,448
JBrowse link
G Hspa8 heat shock protein family A (Hsp70) member 8 involved_in IC PMID:9878698 SynGO PMID:9878698 RGD:10059325 NCBI chr 8:41,183,397...41,187,260
Ensembl chr 8:41,183,264...41,187,259
JBrowse link
G Nostrin nitric oxide synthase trafficking involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:53,904,746...53,970,995
Ensembl chr 3:53,904,827...53,970,988
JBrowse link
G Sh3gl1 SH3 domain containing GRB2 like 1, endophilin A2 involved_in ISO
IBA
UniProtKB:Q62420|UniProtKB:Q62421 (MGI:5300660|PMID:22099461)
PMID:21873635
RGD PMID:22099461 PMID:21873635 MGI:5300660, RGD:13792537 NCBI chr 9:842,285...869,753
Ensembl chr 9:842,288...869,716
JBrowse link
G Sh3gl2 SH3 domain containing GRB2 like 2, endophilin A1 involved_in ISO
IBA
UniProtKB:Q62419|UniProtKB:Q62421 (MGI:5300660|PMID:22099461)
PMID:21873635
RGD PMID:22099461 PMID:21873635 MGI:5300660, RGD:13792537 NCBI chr 5:99,653,189...99,827,500
Ensembl chr 5:99,653,152...100,113,843
JBrowse link
G Sh3gl3 SH3 domain containing GRB2 like 3, endophilin A3 involved_in ISO
IBA
UniProtKB:Q62419|UniProtKB:Q62420 (MGI:5300660|PMID:22099461)
PMID:21873635
RGD PMID:22099461 PMID:21873635 MGI:5300660, RGD:13792537 NCBI chr 1:136,124,502...136,255,669
Ensembl chr 1:136,124,499...136,255,584
JBrowse link
G Synj1 synaptojanin 1 acts_upstream_of_or_within
involved_in
ISO MGI:2179801 (MGI:2447947|PMID:12481038)
(MGI:1346710|PMID:10535736), (MGI:5300660|PMID:22099461)
RGD PMID:10535736 PMID:12481038 PMID:22099461 MGI:1346710 MGI:2447947 MGI:5300660 NCBI chr11:30,192,629...30,269,277
Ensembl chr11:30,192,629...30,269,220
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19834
    localization 6554
      establishment of localization 4941
        transport 4779
          synaptic vesicle recycling 87
            negative regulation of synaptic vesicle recycling + 3
            positive regulation of synaptic vesicle recycling + 16
            regulation of synaptic vesicle recycling + 34
            synaptic vesicle endocytosis + 76
            synaptic vesicle recycling via endosome + 10
Path 2
Term Annotations click to browse term
  biological_process 19834
    localization 6554
      establishment of localization 4941
        transport 4779
          vesicle-mediated transport 1693
            vesicle-mediated transport in synapse 276
              synaptic vesicle cycle 248
                synaptic vesicle recycling 87
                  negative regulation of synaptic vesicle recycling + 3
                  positive regulation of synaptic vesicle recycling + 16
                  regulation of synaptic vesicle recycling + 34
                  synaptic vesicle endocytosis + 76
                  synaptic vesicle recycling via endosome + 10
paths to the root