Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

ONTOLOGY REPORT - ANNOTATIONS

Term:ESCRT complex
go back to main search page
Accession:GO:0036452 term browser browse the term
Definition:An endosomal sorting complex involved in membrane fission processes related to sorting of multivesicular bodies (MVB) in the endocytic pathway, cytokinesis and viral budding among other processes.
Synonyms:exact_synonym: endosomal sorting complex required for transport
 xref: Wikipedia:ESCRT


show annotations for term's descendants           Sort by:
ESCRT I complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DIAPH3 diaphanous related formin 3 part_of IEA Ensembl GO_REF:0000107 NCBI chr11:32,492,735...32,994,854
Ensembl chr11:32,492,740...32,994,844 		JBrowse link
G MVB12A multivesicular body subunit 12A part_of
located_in		 IEA
IBA
ISO		 (PMID:18005716), (PMID:32424346) Ensembl
GO_Central
TreeGrafter
ComplexPortal
InterPro		 PMID:18005716 PMID:32424346 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 2:60,271,020...60,275,972
Ensembl chr 2:60,271,026...60,275,971 		JBrowse link
G MVB12B multivesicular body subunit 12B part_of
located_in		 IEA
IBA
ISO		 (PMID:18005716) InterPro
GO_Central
TreeGrafter
ComplexPortal
Ensembl		 PMID:18005716 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:266,933,459...267,105,790
Ensembl chr 1:266,933,542...267,105,788 		JBrowse link
G TSG101 tumor susceptibility 101 located_in
part_of		 ISO
IEA		 (PMID:18005716), (PMID:21757351), (PMID:32424346) ComplexPortal
TreeGrafter		 PMID:18005716 PMID:21757351 PMID:32424346 GO_REF:0000118 NCBI chr 2:40,673,187...40,720,681 JBrowse link
G UBAP1 ubiquitin associated protein 1 part_of
located_in		 IEA
IBA
ISO		 (PMID:21757351) InterPro
TreeGrafter
GO_Central
Ensembl
ComplexPortal		 PMID:21757351 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr10:32,552,243...32,626,100
Ensembl chr10:32,552,245...32,626,083 		JBrowse link
G UBAP1L ubiquitin associated protein 1 like part_of IEA
IBA		 InterPro
GO_Central
TreeGrafter		 GO_REF:0000002 GO_REF:0000033 GO_REF:0000118 NCBI chr 1:163,133,230...163,153,941
Ensembl chr 1:163,133,053...163,153,303 		JBrowse link
G UEVLD UEV and lactate/malate dehyrogenase domains part_of IEA TreeGrafter GO_REF:0000118 NCBI chr 2:40,617,086...40,671,701
Ensembl chr 2:40,617,039...40,669,595 		JBrowse link
G VPS28 VPS28 subunit of ESCRT-I part_of
located_in		 IEA
ISO		 (PMID:18005716), (PMID:21757351), (PMID:32424346) InterPro
TreeGrafter
ComplexPortal
Ensembl
UniProt		 PMID:18005716 PMID:21757351 PMID:32424346 GO_REF:0000002 GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 NCBI chr 4:362,902...368,038
Ensembl chr 4:362,912...370,588 		JBrowse link
G VPS37A VPS37A subunit of ESCRT-I part_of
located_in		 IEA
IBA
ISO		 (PMID:18005716), (PMID:21757351) Ensembl
GO_Central
TreeGrafter
ComplexPortal
UniProt		 PMID:18005716 PMID:21757351 GO_REF:0000033 GO_REF:0000107 GO_REF:0000117 GO_REF:0000118 NCBI chr17:4,949,632...5,014,842
Ensembl chr17:4,949,644...4,988,074 		JBrowse link
G VPS37B VPS37B subunit of ESCRT-I part_of
located_in		 IEA
IBA
ISO		 (PMID:18005716), (PMID:21757351), (PMID:32424346) Ensembl
GO_Central
TreeGrafter
ComplexPortal
UniProt		 PMID:18005716 PMID:21757351 PMID:32424346 GO_REF:0000033 GO_REF:0000107 GO_REF:0000117 GO_REF:0000118 NCBI chr14:29,963,087...29,994,650
Ensembl chr14:29,962,042...29,994,646 		JBrowse link
G VPS37C VPS37C subunit of ESCRT-I part_of
located_in		 IEA
IBA
ISO		 (PMID:18005716), (PMID:21757351) Ensembl
GO_Central
TreeGrafter
ComplexPortal
UniProt		 PMID:18005716 PMID:21757351 GO_REF:0000033 GO_REF:0000107 GO_REF:0000117 GO_REF:0000118 NCBI chr 2:10,614,198...10,643,545
Ensembl chr 2:10,632,927...10,643,539 		JBrowse link
G VPS37D VPS37D subunit of ESCRT-I part_of
located_in		 IEA
IBA
ISO		 (PMID:18005716), (PMID:21757351) Ensembl
GO_Central
TreeGrafter
ComplexPortal
UniProt		 PMID:18005716 PMID:21757351 GO_REF:0000033 GO_REF:0000107 GO_REF:0000117 GO_REF:0000118 NCBI chr 3:10,947,403...10,951,271
Ensembl chr 3:10,947,403...10,951,273 		JBrowse link
ESCRT II complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SNF8 SNF8 subunit of ESCRT-II located_in
part_of		 ISO
IBA
IEA		 (PMID:18539118) ComplexPortal
GO_Central
TreeGrafter
Ensembl
UniProt
InterPro		 PMID:18539118 GO_REF:0000002 GO_REF:0000033 GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 NCBI chr12:25,142,748...25,152,847
Ensembl chr12:25,142,813...25,153,016 		JBrowse link
G VPS25 vacuolar protein sorting 25 homolog located_in
part_of		 ISO
IEA
IBA		 (PMID:18539118) ComplexPortal
TreeGrafter
GO_Central
InterPro
Ensembl		 PMID:18539118 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr12:20,082,864...20,088,443
Ensembl chr12:20,082,865...20,088,566 		JBrowse link
G VPS36 vacuolar protein sorting 36 homolog located_in
part_of		 ISO
IEA
IBA		 (PMID:18539118) ComplexPortal
TreeGrafter
GO_Central
InterPro
Ensembl
UniProt		 PMID:18539118 GO_REF:0000002 GO_REF:0000033 GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 NCBI chr11:15,701,370...15,735,469
Ensembl chr11:15,701,373...15,735,474 		JBrowse link
ESCRT III complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CHMP1A charged multivesicular body protein 1A part_of IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr 6:351,878...358,655
Ensembl chr 6:351,866...358,653 		JBrowse link
G CHMP1B charged multivesicular body protein 1B part_of ISO (PMID:24878737) UniProt PMID:24878737 NCBI chr 6:97,356,924...97,359,613 JBrowse link
G CHMP2A charged multivesicular body protein 2A part_of IEA
IBA		 Ensembl
TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 6:63,102,155...63,105,032
Ensembl chr 6:63,102,156...63,104,943 		JBrowse link
G CHMP2B charged multivesicular body protein 2B part_of IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr13:168,534,950...168,569,574
Ensembl chr13:168,533,694...168,569,688 		JBrowse link
G CHMP3 charged multivesicular body protein 3 part_of IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 3:58,206,921...58,279,252
Ensembl chr 3:58,206,921...58,279,248 		JBrowse link
G CHMP4A charged multivesicular body protein 4A part_of IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 7:75,089,092...75,093,796
Ensembl chr 7:75,089,423...75,097,761 		JBrowse link
G CHMP4B charged multivesicular body protein 4B part_of IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr17:37,285,422...37,334,103
Ensembl chr17:37,285,442...37,334,101 		JBrowse link
G CHMP4C charged multivesicular body protein 4C part_of IBA
IEA		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr 4:54,860,481...54,895,229
Ensembl chr 4:54,859,930...54,895,192 		JBrowse link
G CHMP6 charged multivesicular body protein 6 part_of IEA
IBA		 Ensembl
GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr12:1,691,821...1,698,347
Ensembl chr12:1,691,823...1,698,305 		JBrowse link
G CHMP7 charged multivesicular body protein 7 part_of IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr14:7,390,066...7,403,657
Ensembl chr14:7,390,061...7,403,654 		JBrowse link
ESCRT-0 complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HGS hepatocyte growth factor-regulated tyrosine kinase substrate part_of
located_in		 IEA
ISO		 (PMID:19278655) Ensembl
ComplexPortal		 PMID:19278655 GO_REF:0000107 NCBI chr12:1,207,036...1,219,750
Ensembl chr12:1,207,036...1,219,715 		JBrowse link
G SH3D19 SH3 domain containing 19 part_of IEA TreeGrafter GO_REF:0000118 NCBI chr 8:77,689,393...77,876,412
Ensembl chr 8:77,689,716...77,876,664 		JBrowse link
G STAM signal transducing adaptor molecule part_of
located_in		 IEA
ISO
IBA		 (PMID:19278655) Ensembl
ComplexPortal
GO_Central
TreeGrafter		 PMID:19278655 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr10:43,946,990...44,016,064
Ensembl chr10:43,947,011...44,016,056 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 18685
    protein-containing complex 6006
      ESCRT complex 28
        ESCRT I complex 12
        ESCRT II complex 3
        ESCRT III complex 10
        ESCRT IV complex 0
        ESCRT-0 complex 3
Path 2
Term Annotations click to browse term
  cellular_component 18685
    cellular anatomical entity 18463
      organelle 12421
        membrane-bounded organelle 11396
          vesicle 2126
            intracellular vesicle 1903
              cytoplasmic vesicle 1894
                endosome 905
                  ESCRT complex 28
                    ESCRT I complex 12
                    ESCRT II complex 3
                    ESCRT III complex 10
                    ESCRT IV complex 0
                    ESCRT-0 complex 3
paths to the root