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ONTOLOGY REPORT - ANNOTATIONS


Term:myofibroblast differentiation
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Accession:GO:0036446 term browser browse the term
Definition:The process in which an undifferentiated cell acquires the features of a myofibroblast cell.
Synonyms:exact_synonym: myofibroblast cell differentiation



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myofibroblast differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fosl2 FOS like 2, AP-1 transcription factor subunit involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(PMID:28818870)
Ensembl
RGD
PMID:28818870 GO_REF:0000107 NCBI chr 6:24,297,898...24,319,219
Ensembl chr 6:24,300,956...24,320,034
JBrowse link
G Meox2 mesenchyme homeobox 2 IEP RGD PMID:24155330 RGD:155882536 NCBI chr 6:53,856,760...53,917,467
Ensembl chr 6:53,856,758...53,917,467
JBrowse link
G Rxfp1 relaxin family peptide receptor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(PMID:19073841)
Ensembl
RGD
PMID:19073841 GO_REF:0000107 NCBI chr 2:164,772,270...164,893,484
Ensembl chr 2:164,774,799...164,893,412
JBrowse link
G Tgfbr1 transforming growth factor, beta receptor 1 involved_in ISO
IEA
(PMID:28251559)
GO_REF:0000107
RGD
Ensembl
PMID:28251559 GO_REF:0000107 NCBI chr 5:61,653,773...61,710,777
Ensembl chr 5:61,653,233...61,710,777
JBrowse link
G Zeb2 zinc finger E-box binding homeobox 2 IEP RGD PMID:24155330 RGD:155882536 NCBI chr 3:29,214,581...29,344,890
Ensembl chr 3:29,218,301...29,345,157
JBrowse link
negative regulation of myofibroblast differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mir27b microRNA 27b acts_upstream_of ISO (PMID:28095798) RGD PMID:28095798 NCBI chr17:1,813,427...1,813,523
Ensembl chr17:1,813,426...1,813,529
JBrowse link
G Mir9-3 microRNA 9-3 involved_in ISO (PMID:26315535) RGD PMID:26315535 NCBI chr 1:133,440,049...133,440,138 JBrowse link
G Mir98 microRNA 98 involved_in ISO (PMID:28251559) RGD PMID:28251559 NCBI chr  X:20,981,235...20,981,342
Ensembl chr  X:20,981,235...20,981,342
JBrowse link
G Pdcd4 programmed cell death 4 involved_in ISO (PMID:20533548) RGD PMID:20533548 NCBI chr 1:252,921,342...252,944,278
Ensembl chr 1:252,921,392...252,944,275
JBrowse link
G Rb1 RB transcriptional corepressor 1 involved_in IEA
ISO
GO_REF:0000107
(MGI:6112863|PMID:29304157)
Ensembl
RGD
PMID:29304157 GO_REF:0000107 MGI:6112863 NCBI chr15:48,371,295...48,502,473
Ensembl chr15:48,371,296...48,502,302
JBrowse link
G Tp53inp1 tumor protein p53 inducible nuclear protein 1 involved_in ISO (MGI:5788610|PMID:26589288) RGD PMID:26589288 MGI:5788610 NCBI chr 5:24,253,986...24,272,250
Ensembl chr 5:24,260,568...24,267,968
JBrowse link
G Tsku tsukushi, small leucine rich proteoglycan involved_in IEA
ISO
ISS
GO_REF:0000107
(MGI:6478057|PMID:25159578)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:25159578 GO_REF:0000024 GO_REF:0000107 MGI:6478057 NCBI chr 1:152,660,259...152,671,682
Ensembl chr 1:152,656,693...152,672,588
JBrowse link
positive regulation of myofibroblast differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mir21 microRNA 21 involved_in IMP
ISO
(PMID:20533548) RGD PMID:20533548 PMID:27798620 RGD:41404703 NCBI chr10:71,405,257...71,405,348
Ensembl chr10:71,405,257...71,405,348
JBrowse link
G Mir223 microRNA 223 IMP RGD PMID:29689569 RGD:25823140 NCBI chr  X:61,141,887...61,141,996
Ensembl chr  X:61,141,887...61,141,996
JBrowse link
G Mir433 microRNA 433 IDA RGD PMID:27698941 RGD:14700802 NCBI chr 6:128,545,119...128,545,211
Ensembl chr 6:128,545,112...128,545,217
JBrowse link
G Parp1 poly (ADP-ribose) polymerase 1 IMP RGD PMID:23260200 RGD:10413908 NCBI chr13:92,307,593...92,339,406
Ensembl chr13:92,307,586...92,339,404
JBrowse link
regulation of myofibroblast differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fosl2 FOS like 2, AP-1 transcription factor subunit involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3757560 (PMID:31135379)
Ensembl
RGD
PMID:31135379 GO_REF:0000107 NCBI chr 6:24,297,898...24,319,219
Ensembl chr 6:24,300,956...24,320,034
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19872
    developmental process 6994
      cellular developmental process 4721
        cell differentiation 4720
          myofibroblast differentiation 16
            negative regulation of myofibroblast differentiation 7
            positive regulation of myofibroblast differentiation 4
            regulation of myofibroblast differentiation + 12
paths to the root