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ONTOLOGY REPORT - ANNOTATIONS


Term:myofilament
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Accession:GO:0036379 term browser browse the term
Definition:Any of the smallest contractile units of a myofibril (striated muscle fiber).
Synonyms:exact_synonym: striated muscle filament


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myofilament term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mybphl myosin binding protein H-like ISS
ISO
GO_REF:0000024
(MGI:MGI:6116094|PMID:28778945)
(PMID:28778945)
UniProt
RGD
PMID:28778945 GO_REF:0000024, MGI:MGI:6116094 NCBI chr 2:211,158,902...211,173,036
Ensembl chr 2:211,159,062...211,173,786
JBrowse link
cardiac Troponin complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tnnc1 troponin C1, slow skeletal and cardiac type ISO (PMID:25771144) RGD PMID:25771144 NCBI chr16:7,292,207...7,295,238
Ensembl chr16:7,292,096...7,295,465
JBrowse link
G Tnni3 troponin I3, cardiac type ISO (PMID:25771144) RGD PMID:25771144 NCBI chr 1:72,882,806...72,886,490
Ensembl chr 1:72,882,806...72,886,488
JBrowse link
G Tnnt2 troponin T2, cardiac type ISO (PMID:25771144) RGD PMID:25771144 NCBI chr13:52,662,974...52,680,992
Ensembl chr13:52,662,996...52,680,990
JBrowse link
striated muscle myosin thick filament term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mybpc3 myosin binding protein C3 ISO
IDA
(PMID:10024460)
PMID:8799143
RGD PMID:10024460, PMID:8799143 RGD:8553425 NCBI chr 3:79,940,509...79,958,731
Ensembl chr 3:79,940,561...79,958,730
JBrowse link
G Trim32 tripartite motif-containing 32 colocalizes_with ISS
ISO
GO_REF:0000024
(MGI:MGI:3610252|PMID:16243356)
BHF-UCL
RGD
PMID:16243356 GO_REF:0000024, MGI:MGI:3610252 NCBI chr 5:81,431,554...81,449,023
Ensembl chr 5:81,431,600...81,442,451
JBrowse link
striated muscle thin filament term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acta1 actin, alpha 1, skeletal muscle ISO
IBA
ISS
(PMID:15198992)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:15198992, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr19:56,674,072...56,677,084
Ensembl chr19:56,674,074...56,677,084
JBrowse link
G Fhod3 formin homology 2 domain containing 3 IDA
IBA
PMID:19706596
PMID:21873635
MGI
GO_Central
PMID:19706596, PMID:21873635 RGD:8554207, RGD:13792537 NCBI chr18:16,650,786...17,332,209
Ensembl chr18:16,650,806...17,332,210
JBrowse link
G Lmod1 leiomodin 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:52,147,099...52,189,835
Ensembl chr13:52,147,555...52,190,228
JBrowse link
G Lmod2 leiomodin 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:51,553,439...51,561,135
Ensembl chr 4:51,553,454...51,561,174
JBrowse link
G Lmod3 leiomodin 3 ISO
IBA
(PMID:25250574)
PMID:21873635
RGD PMID:25250574, PMID:21873635 RGD:13792537 NCBI chr 4:129,604,378...129,619,136
Ensembl chr 4:129,604,267...129,619,142
JBrowse link
G LOC100909784 leiomodin-2-like IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:51,661,538...51,669,306
Ensembl chr 4:51,661,654...51,671,203
JBrowse link
G Tmod1 tropomodulin 1 IEA
IBA
ISO
GO_REF:0000107
PMID:21873635
(PMID:25250574)
Ensembl
RGD
PMID:25250574, PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr 5:61,635,244...61,712,052
Ensembl chr 5:61,657,507...61,712,051
JBrowse link
G Tmod2 tropomodulin 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:82,505,947...82,547,450
Ensembl chr 8:82,506,934...82,533,689
JBrowse link
G Tmod3 tropomodulin 3 ISO
IBA
(MGI:MGI:4440662|PMID:20368620)
PMID:21873635
RGD PMID:20368620, PMID:21873635 MGI:MGI:4440662, RGD:13792537 NCBI chr 8:82,432,165...82,492,243
Ensembl chr 8:82,432,169...82,492,243
JBrowse link
G Tmod4 tropomodulin 4 ISO
IBA
(MGI:MGI:4440662|PMID:20368620)
PMID:21873635
(PMID:25250574)
RGD PMID:20368620, PMID:25250574, PMID:21873635 MGI:MGI:4440662, RGD:13792537 NCBI chr 2:196,294,990...196,299,896
Ensembl chr 2:196,295,069...196,299,896
JBrowse link
G Tnnt2 troponin T2, cardiac type ISO
ISS
(PMID:12186860)
GO_REF:0000024
RGD
UniProt
PMID:12186860 GO_REF:0000024 NCBI chr13:52,662,974...52,680,992
Ensembl chr13:52,662,996...52,680,990
JBrowse link
G Ttn titin ISO (PMID:11717165) RGD PMID:11717165 NCBI chr 3:63,565,160...63,837,815 JBrowse link
troponin complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07013776.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 2:256,154,141...256,154,584 JBrowse link
G Tnnc1 troponin C1, slow skeletal and cardiac type ISO
IBA
(PMID:10850966), (PMID:12093807)
PMID:21873635
RGD PMID:10850966, PMID:12093807, PMID:21873635 RGD:13792537 NCBI chr16:7,292,207...7,295,238
Ensembl chr16:7,292,096...7,295,465
JBrowse link
G Tnnc2 troponin C2, fast skeletal type ISO
IBA
(PMID:17194691)
PMID:21873635
RGD PMID:17194691, PMID:21873635 RGD:13792537 NCBI chr 3:161,243,607...161,246,335
Ensembl chr 3:161,243,587...161,246,351
JBrowse link
G Tnni1 troponin I1, slow skeletal type IDA
IEA
GO_REF:0000002 InterPro PMID:16192301 GO_REF:0000002, RGD:1599030 NCBI chr13:52,624,856...52,637,297
Ensembl chr13:52,624,878...52,637,297
JBrowse link
G Tnni2 troponin I2, fast skeletal type IDA
ISO
IEA
(PMID:17194691)
GO_REF:0000002
RGD
InterPro
PMID:17194691, PMID:16192301 GO_REF:0000002, RGD:1599030 NCBI chr 1:215,609,110...215,611,652
Ensembl chr 1:215,609,036...215,611,658
JBrowse link
G Tnni3 troponin I3, cardiac type TAS
ISO
(PMID:10806205), (PMID:10850966), (PMID:12093807), (PMID:7957210) RGD PMID:7957210, PMID:10806205, PMID:10850966, PMID:12093807, PMID:1886137 RGD:730167 NCBI chr 1:72,882,806...72,886,490
Ensembl chr 1:72,882,806...72,886,488
JBrowse link
G Tnnt1 troponin T1, slow skeletal type IDA
IBA
ISO
PMID:21873635
(PMID:15665378), (PMID:18032382)
RGD PMID:15665378, PMID:18032382, PMID:16192301, PMID:21873635, PMID:15788488 RGD:1599030, RGD:13792537, RGD:1599482 NCBI chr 1:72,889,270...72,899,629
Ensembl chr 1:72,889,270...72,899,659
JBrowse link
G Tnnt2 troponin T2, cardiac type IDA
IBA
ISO
IEA
PMID:21873635
(PMID:12093807), (PMID:12186860), (PMID:2530435)
(MGI:MGI:2675179|PMID:12832403)
GO_REF:0000002
RGD
InterPro
PMID:2530435, PMID:12093807, PMID:12186860, PMID:12832403, PMID:12501194, PMID:21873635 GO_REF:0000002, MGI:MGI:2675179, RGD:1580426, RGD:13792537 NCBI chr13:52,662,974...52,680,992
Ensembl chr13:52,662,996...52,680,990
JBrowse link
G Tnnt3 troponin T3, fast skeletal type TAS
IBA
IEA
ISO
IDA
PMID:21873635
GO_REF:0000107
(PMID:17194691), (PMID:8987992), (PMID:9724539)
GO_REF:0000002
Ensembl
RGD
InterPro
PMID:8987992, PMID:9724539, PMID:17194691, PMID:11940518, PMID:21873635, PMID:16192301 GO_REF:0000002, GO_REF:0000107, RGD:1299083, RGD:13792537, RGD:1599030 NCBI chr 1:215,666,628...215,683,628
Ensembl chr 1:215,666,628...215,683,628
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 20610
    cellular anatomical entity 20359
      myofilament 23
        striated muscle myosin thick filament 2
        striated muscle thin filament + 20
Path 2
Term Annotations click to browse term
  cellular_component 20610
    cellular anatomical entity 20359
      intracellular anatomical structure 14705
        intracellular organelle 12917
          intracellular non-membrane-bounded organelle 5179
            contractile fiber 247
              myofibril 237
                myofilament 23
                  striated muscle myosin thick filament 2
                  striated muscle thin filament + 20
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.