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ONTOLOGY REPORT - ANNOTATIONS


Term:transforming growth factor beta activation
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Accession:GO:0036363 term browser browse the term
Definition:The release of transforming growth factor beta (TGF-beta) from its latent state. TGF-beta is secreted as part of a large latent complex (LLC) that is targeted to the extracellular matrix. Release of TGFbeta from its latent state is required for TGFbeta to bind to its receptors, and can occur by a variety of mechanisms.
Synonyms:exact_synonym: L-TGF-beta activation;   TGF-B activation;   TGF-beta activation;   TGFB activation;   TGFbeta activation;   latent TGF-beta activation



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transforming growth factor beta activation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LTBP3 latent transforming growth factor beta binding protein 3 involved_in IMP (PMID:18672106) UniProt PMID:18672106 NCBI chr11:65,538,559...65,558,359
Ensembl chr11:65,538,559...65,558,930
JBrowse link
negative regulation of transforming growth factor beta activation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACVR2B activin A receptor type 2B involved_in ISO AgBase DOI:10.1016/j.procbio.2011.10.027 NCBI chr 3:38,453,890...38,493,142
Ensembl chr 3:38,453,890...38,493,142
JBrowse link
G HSP90AB1 heat shock protein 90 alpha family class B member 1 involved_in IDA (PMID:20599762) UniProt PMID:20599762 NCBI chr 6:44,246,194...44,253,883
Ensembl chr 6:44,246,166...44,253,888
JBrowse link
positive regulation of transforming growth factor beta activation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GATA6 GATA binding protein 6 involved_in IDA (PMID:33082341) UniProt PMID:33082341 NCBI chr18:22,169,589...22,202,528
Ensembl chr18:22,169,589...22,202,528
JBrowse link
G TSC22D1 TSC22 domain family member 1 involved_in IMP (PMID:15881652) UniProt PMID:15881652 NCBI chr13:44,432,143...44,577,344
Ensembl chr13:44,432,143...44,577,147
JBrowse link
positive regulation of transforming growth factor beta1 activation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADAM8 ADAM metallopeptidase domain 8 involved_in ISS
IEA
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr10:133,262,423...133,276,868
Ensembl chr10:133,262,420...133,276,868
JBrowse link
G AGT angiotensinogen involved_in ISS UniProt GO_REF:0000024 NCBI chr 1:230,702,523...230,745,583
Ensembl chr 1:230,690,776...230,745,576
JBrowse link
regulation of transforming growth factor beta activation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ITGAV integrin subunit alpha V involved_in IDA (PMID:22278742) UniProt PMID:22278742 NCBI chr 2:186,590,056...186,680,901
Ensembl chr 2:186,590,010...186,680,901
JBrowse link
G ITGB6 integrin subunit beta 6 involved_in IDA (PMID:22278742) UniProt PMID:22278742 NCBI chr 2:160,099,671...160,200,272
Ensembl chr 2:160,099,667...160,200,313
JBrowse link
G ITGB8 integrin subunit beta 8 involved_in IEA
ISS
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr 7:20,329,766...20,415,754
Ensembl chr 7:20,330,702...20,415,754
JBrowse link
G LRRC32 leucine rich repeat containing 32 involved_in IDA (PMID:19651619), (PMID:19750484), (PMID:22278742) UniProt PMID:19651619 PMID:19750484 PMID:22278742 NCBI chr11:76,657,524...76,670,747
Ensembl chr11:76,657,524...76,670,747
JBrowse link
G LTBP1 latent transforming growth factor beta binding protein 1 involved_in IDA (PMID:2022183), (PMID:8617200) UniProt PMID:2022183 PMID:8617200 NCBI chr 2:32,946,953...33,399,509
Ensembl chr 2:32,946,953...33,399,509
JBrowse link
regulation of transforming growth factor beta3 activation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LRRC32 leucine rich repeat containing 32 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:76,657,524...76,670,747
Ensembl chr11:76,657,524...76,670,747
JBrowse link
transforming growth factor beta1 activation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NRROS negative regulator of reactive oxygen species involved_in ISS
IBA
IEA
UniProt
GO_Central
Ensembl
GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 3:196,639,694...196,662,004
Ensembl chr 3:196,639,694...196,662,004
JBrowse link
G PSG9 pregnancy specific beta-1-glycoprotein 9 involved_in IDA (PMID:27389696) UniProt PMID:27389696 NCBI chr19:43,253,282...43,269,530
Ensembl chr19:43,211,791...43,269,530
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19761
    cellular process 18444
      cell communication 7304
        cell-cell signaling 1703
          transforming growth factor beta activation 14
            negative regulation of transforming growth factor beta activation + 2
            positive regulation of transforming growth factor beta activation + 4
            regulation of transforming growth factor beta activation + 11
            transforming growth factor beta1 activation + 4
            transforming growth factor beta2 activation + 0
            transforming growth factor beta3 activation + 1
Path 2
Term Annotations click to browse term
  biological_process 19761
    biological regulation 13391
      regulation of biological process 13022
        signaling 7194
          cell-cell signaling 1703
            transforming growth factor beta activation 14
              negative regulation of transforming growth factor beta activation + 2
              positive regulation of transforming growth factor beta activation + 4
              regulation of transforming growth factor beta activation + 11
              transforming growth factor beta1 activation + 4
              transforming growth factor beta2 activation + 0
              transforming growth factor beta3 activation + 1
paths to the root