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ONTOLOGY REPORT - ANNOTATIONS

Term:lymph vessel morphogenesis
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Accession:GO:0036303 term browser browse the term
Definition:The process in which the anatomical structures of lymph vessels are generated and organized. The lymph vessel is the vasculature carrying lymph.

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lymph vessel morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pkd1 polycystin 1, transient receptor potential channel interacting acts_upstream_of_or_within ISO MGI:3612341 (MGI:5576424|PMID:24767999) RGD PMID:24767999 MGI:5576424 NCBI chr10:13,914,057...13,962,008
Ensembl chr10:13,915,214...13,962,008 		JBrowse link
G Svep1 sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:5286317|MGI:6188639 (MGI:5913245|PMID:28179432), (MGI:6156694|PMID:28179430)		 Ensembl
RGD		 PMID:28179430 PMID:28179432 GO_REF:0000107 MGI:5913245 MGI:6156694 NCBI chr 5:75,147,245...75,320,873
Ensembl chr 5:75,143,867...75,319,765 		JBrowse link
G Vegfa vascular endothelial growth factor A involved_in ISO (MGI:4461879|PMID:18093989) RGD PMID:18093989 MGI:4461879 NCBI chr 9:17,340,341...17,355,681
Ensembl chr 9:17,340,341...17,355,681 		JBrowse link
branching involved in lymph vessel morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nfatc1 nuclear factor of activated T-cells 1 acts_upstream_of_or_within ISO MGI:2181762 (MGI:3848105|PMID:19233265) RGD PMID:19233265 MGI:3848105 NCBI chr18:77,203,517...77,322,690
Ensembl chr18:77,203,525...77,322,690 		JBrowse link
G Tie1 tyrosine kinase with immunoglobulin-like and EGF-like domains 1 involved_in ISO (MGI:4439415|PMID:20223757) RGD PMID:20223757 MGI:4439415 NCBI chr 5:137,294,544...137,321,116
Ensembl chr 5:137,294,544...137,321,121 		JBrowse link
lymphangiogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acvr2b activin A receptor type 2B involved_in IEA
ISO		 GO_REF:0000107
(MGI:4436974|PMID:19903896)		 Ensembl
RGD		 PMID:19903896 GO_REF:0000107 MGI:4436974 NCBI chr 8:128,087,308...128,126,776
Ensembl chr 8:128,087,345...128,118,746 		JBrowse link
G Acvrl1 activin A receptor like type 1 involved_in ISO (MGI:4436974|PMID:19903896) RGD PMID:19903896 MGI:4436974 NCBI chr 7:142,769,942...142,787,336
Ensembl chr 7:142,776,252...142,787,335 		JBrowse link
G Bmpr2 bone morphogenetic protein receptor type 2 involved_in ISO (MGI:4436974|PMID:19903896) RGD PMID:19903896 MGI:4436974 NCBI chr 9:66,568,074...66,683,019
Ensembl chr 9:66,568,074...66,676,494 		JBrowse link
G Ccbe1 collagen and calcium binding EGF domains 1 involved_in
acts_upstream_of_or_within		 ISO
IEA		 (PMID:19935664)
MGI:5007046 (MGI:5432672|PMID:21778431)
GO_REF:0000107		 RGD
Ensembl		 PMID:19935664 PMID:21778431 GO_REF:0000107 MGI:5432672 NCBI chr18:61,758,754...62,013,194
Ensembl chr18:61,759,289...61,788,863 		JBrowse link
G Clec14a C-type lectin domain containing 14A acts_upstream_of_or_within ISO MGI:6404416 (MGI:5881854|PMID:27991863) RGD PMID:27991863 MGI:5881854 NCBI chr 6:79,303,301...79,306,443
Ensembl chr 6:79,303,304...79,306,443 		JBrowse link
G Flt4 Fms related receptor tyrosine kinase 4 involved_in IEA
ISO
ISS		 GO_REF:0000107
(MGI:5294901|PMID:20697430)
GO_REF:0000024
(PMID:19779139)		 Ensembl
RGD
UniProt		 PMID:19779139 PMID:20697430 GO_REF:0000024 GO_REF:0000107 MGI:5294901 NCBI chr10:35,078,782...35,120,296
Ensembl chr10:35,078,726...35,121,599 		JBrowse link
G Foxc2 forkhead box C2 involved_in ISO (PMID:12114478) RGD PMID:12114478 NCBI chr19:53,044,379...53,047,081
Ensembl chr19:53,044,379...53,047,081 		JBrowse link
G Nfatc1 nuclear factor of activated T-cells 1 acts_upstream_of_or_within ISO MGI:103178|MGI:107163 (MGI:3848105|PMID:19233265) RGD PMID:19233265 MGI:3848105 NCBI chr18:77,203,517...77,322,690
Ensembl chr18:77,203,525...77,322,690 		JBrowse link
G Pdpn podoplanin involved_in
acts_upstream_of_or_within		 ISS
ISO		 GO_REF:0000024
MGI:2657021 (MGI:3522394|PMID:12853470)		 UniProt
RGD		 PMID:12853470 GO_REF:0000024 MGI:3522394 NCBI chr 5:161,947,137...161,981,441
Ensembl chr 5:161,947,137...161,981,441 		JBrowse link
G Ppp3cb protein phosphatase 3 catalytic subunit beta involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:102469|MGI:103178 (MGI:3848104|PMID:19233846)		 Ensembl
RGD		 PMID:19233846 GO_REF:0000107 MGI:3848104 NCBI chr15:4,209,702...4,236,895
Ensembl chr15:4,209,703...4,236,895 		JBrowse link
G Prox1 prospero homeobox 1 involved_in ISO (PMID:12412020) RGD PMID:12412020 NCBI chr13:108,382,536...108,444,107
Ensembl chr13:108,382,399...108,443,294 		JBrowse link
G Ptpn14 protein tyrosine phosphatase, non-receptor type 14 involved_in IBA
ISO		 PMID:21873635
(MGI:4939987|PMID:20826270)
(PMID:20826270)		 RGD PMID:20826270, PMID:21873635 MGI:4939987, RGD:13792537 NCBI chr13:108,689,916...108,841,593
Ensembl chr13:108,696,336...108,841,511 		JBrowse link
G Sox18 SRY-box transcription factor 18 involved_in
acts_upstream_of_or_within		 IBA
ISO		 PMID:21873635
MGI:2178809 (MGI:3828192|PMID:18931657)
(PMID:12740761)		 RGD PMID:12740761 PMID:18931657, PMID:21873635 MGI:3828192, RGD:13792537 NCBI chr 3:177,177,237...177,179,039
Ensembl chr 3:177,177,310...177,179,127 		JBrowse link
G Vegfa vascular endothelial growth factor A acts_upstream_of_or_within ISO MGI:102469|MGI:107163 (MGI:3848105|PMID:19233265) RGD PMID:19233265 MGI:3848105 NCBI chr 9:17,340,341...17,355,681
Ensembl chr 9:17,340,341...17,355,681 		JBrowse link
lymphatic endothelial cell migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lgals12 galectin 12 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:222,891,626...222,903,728
Ensembl chr 1:222,891,626...222,902,320 		JBrowse link
G Lgals8 galectin 8 involved_in IEA
IBA
ISS
ISO		 GO_REF:0000107
PMID:21873635
GO_REF:0000024
(PMID:19268462)		 Ensembl
UniProt
RGD		 PMID:19268462, PMID:21873635 GO_REF:0000024 GO_REF:0000107, RGD:13792537 NCBI chr17:66,487,451...66,515,316
Ensembl chr17:66,487,457...66,511,870 		JBrowse link
negative regulation of lymphangiogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Epha2 Eph receptor A2 acts_upstream_of_or_within ISO MGI:3040415 (MGI:3847147|PMID:19443703) RGD PMID:19443703 MGI:3847147 NCBI chr 5:159,845,773...159,874,203
Ensembl chr 5:159,845,774...159,874,206 		JBrowse link
G Foxc1 forkhead box C1 involved_in ISO (MGI:5314489|PMID:22171010) RGD PMID:22171010 MGI:5314489 NCBI chr17:33,947,501...33,951,484
Ensembl chr17:33,947,506...33,951,484 		JBrowse link
G Vash1 vasohibin 1 involved_in ISO UniProtKB:P97953|UniProtKB:Q00731 (PMID:20133819) RGD PMID:20133819 NCBI chr 6:110,624,377...110,640,942
Ensembl chr 6:110,624,856...110,637,382 		JBrowse link
positive regulation of lymphangiogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccbe1 collagen and calcium binding EGF domains 1 involved_in ISO (MGI:5568630|PMID:24552833) RGD PMID:24552833 MGI:5568630 NCBI chr18:61,758,754...62,013,194
Ensembl chr18:61,759,289...61,788,863 		JBrowse link
G Vegfa vascular endothelial growth factor A acts_upstream_of_or_within ISO (MGI:4439256|PMID:20133819) RGD PMID:20133819 MGI:4439256 NCBI chr 9:17,340,341...17,355,681
Ensembl chr 9:17,340,341...17,355,681 		JBrowse link
G Vegfc vascular endothelial growth factor C acts_upstream_of_or_within
involved_in		 ISO (MGI:4439256|PMID:20133819)
(MGI:5568630|PMID:24552833)		 RGD PMID:20133819 PMID:24552833 MGI:4439256 MGI:5568630 NCBI chr16:40,440,371...40,555,178
Ensembl chr16:40,440,207...40,555,576 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19634
    developmental process 6783
      anatomical structure morphogenesis 2876
        lymph vessel morphogenesis 23
          lymphangiogenesis + 19
          lymphatic endothelial cell migration 2
Path 2
Term Annotations click to browse term
  biological_process 19634
    developmental process 6783
      anatomical structure development 6259
        multicellular organism development 5741
          system development 5284
            circulatory system development 1228
              vasculature development 775
                lymph vessel development 30
                  lymph vessel morphogenesis 23
                    lymphangiogenesis + 19
                    lymphatic endothelial cell migration 2
paths to the root