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ONTOLOGY REPORT - ANNOTATIONS


Term:response to decreased oxygen levels
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Accession:GO:0036293 term browser browse the term
Definition:Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus reflecting a decline in the level of oxygen.
Comment:This term should be used when a decrease in oxygen levels is not considered a stress response. For a hypoxic stress response, consider instead 'response to hypoxia ; GO:0001666'.
Synonyms:exact_synonym: response to lowered oxygen levels


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response to decreased oxygen levels term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcc9 ATP binding cassette subfamily C member 9 acts_upstream_of_or_within ISO (PMID:20935152) MGI PMID:20935152 NCBI chrNW_004624752:16,792,202...16,926,552
Ensembl chrNW_004624752:16,792,165...16,927,293
JBrowse link
G Col6a1 collagen type VI alpha 1 chain involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:22343710) Ensembl
MGI
PMID:22343710 GO_REF:0000107 NCBI chrNW_004624745:31,125,136...31,140,126
Ensembl chrNW_004624745:31,125,265...31,139,318
JBrowse link
G Nppc natriuretic peptide C involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624843:4,869,278...4,873,444
Ensembl chrNW_004624843:4,869,614...4,873,448
JBrowse link
G Slc1a1 solute carrier family 1 member 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:25350110) Ensembl
MGI
PMID:25350110 GO_REF:0000107 NCBI chrNW_004624736:9,246,348...9,325,671
Ensembl chrNW_004624736:9,246,262...9,325,485
JBrowse link
G Slc39a12 solute carrier family 39 member 12 ISO RGD PMID:26258299 RGD:10401832 NCBI chrNW_004624796:9,940,228...10,008,526
Ensembl chrNW_004624796:9,940,176...10,008,234
JBrowse link
cellular response to anoxia term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cftr CF transmembrane conductance regulator ISO RGD PMID:14975182 RGD:1599599 NCBI chrNW_004624827:1,704,733...1,893,579 JBrowse link
G Eef2k eukaryotic elongation factor 2 kinase ISO RGD PMID:12194824 RGD:8553742 NCBI chrNW_004624782:7,606,576...7,668,771
Ensembl chrNW_004624782:7,606,655...7,666,206
JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha ISO RGD PMID:18614764 RGD:2301848 NCBI chrNW_004624734:39,414,458...39,471,705
Ensembl chrNW_004624734:39,411,824...39,471,705
JBrowse link
G Pdcd10 programmed cell death 10 ISO RGD PMID:22482882 RGD:401827112 NCBI chrNW_004624730:45,653,470...45,698,461
Ensembl chrNW_004624730:45,654,022...45,678,745
JBrowse link
cellular response to decreased oxygen levels term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akt1 AKT serine/threonine kinase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:24875179) Ensembl
MGI
PMID:24875179 GO_REF:0000107 NCBI chrNW_004624734:507,880...525,295
Ensembl chrNW_004624734:509,368...525,295
JBrowse link
G Cpeb4 cytoplasmic polyadenylation element binding protein 4 involved_in ISO PMID:20937770 UniProt PMID:20937770 RGD:8553637 NCBI chrNW_004624733:16,082,461...16,146,798
Ensembl chrNW_004624733:16,082,369...16,147,075
JBrowse link
G Pick1 protein interacting with PRKCA 1 involved_in ISO PMID:23843614 UniProt PMID:23843614 RGD:8553949 NCBI chrNW_004624752:9,880,773...9,895,270
Ensembl chrNW_004624752:9,880,670...9,895,230
JBrowse link
G Pten phosphatase and tensin homolog acts_upstream_of_or_within ISO (PMID:24875179) MGI PMID:24875179 NCBI chrNW_004624791:13,975,235...14,056,900 JBrowse link
G Tsc1 TSC complex subunit 1 involved_in ISO PMID:23435171 ParkinsonsUK-UCL PMID:23435171 RGD:10448950 NCBI chrNW_004624760:3,479,028...3,536,612
Ensembl chrNW_004624760:3,498,692...3,532,011
JBrowse link
cellular response to hypoxia term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acaa2 acetyl-CoA acyltransferase 2 involved_in ISO (PMID:18371312) BHF-UCL PMID:18371312 NCBI chrNW_004624778:13,307,236...13,336,347
Ensembl chrNW_004624778:13,307,094...13,336,120
JBrowse link
G Adam8 ADAM metallopeptidase domain 8 involved_in ISO (PMID:18566576) BHF-UCL PMID:18566576 NCBI chrNW_004624737:13,459,274...13,474,686 JBrowse link
G Ado 2-aminoethanethiol dioxygenase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624791:962,840...966,603
Ensembl chrNW_004624791:965,433...966,245
JBrowse link
G Adrb2 adrenoceptor beta 2 ISO RGD PMID:19098126 RGD:8548506 NCBI chrNW_004624774:8,211,723...8,215,962
Ensembl chrNW_004624774:8,211,984...8,213,240
JBrowse link
G Aifm1 apoptosis inducing factor mitochondria associated 1 ISO oxygen-glucose deprivation RGD PMID:14526224 RGD:10047409 NCBI chrNW_004624797:9,346,620...9,384,531
Ensembl chrNW_004624797:9,345,726...9,384,645
JBrowse link
G Ak4 adenylate kinase 4 acts_upstream_of
involved_in
ISO (PMID:19130895), (PMID:23474458), (PMID:26980435)
(PMID:30696468)
UniProt PMID:19130895 PMID:23474458 PMID:26980435 PMID:30696468 NCBI chrNW_004624742:29,547,237...29,574,160 JBrowse link
G Akt1 AKT serine/threonine kinase 1 ISO RGD PMID:20515660 RGD:5509097 NCBI chrNW_004624734:507,880...525,295
Ensembl chrNW_004624734:509,368...525,295
JBrowse link
G Ankrd1 ankyrin repeat domain 1 ISO RGD PMID:19299913 RGD:5133278 NCBI chrNW_004624737:2,127,253...2,136,181
Ensembl chrNW_004624737:2,127,267...2,136,347
JBrowse link
G Aqp1 aquaporin 1 (Colton blood group) involved_in ISO (PMID:18275976) UniProt PMID:18275976 NCBI chrNW_004624783:164,615...177,317
Ensembl chrNW_004624783:164,609...177,766
JBrowse link
G Aqp3 aquaporin 3 (Gill blood group) acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:24462679) MGI
Ensembl
PMID:24462679 GO_REF:0000107 NCBI chrNW_004624736:38,194,722...38,200,961
Ensembl chrNW_004624736:38,194,545...38,201,036
JBrowse link
G Asl argininosuccinate lyase ISO RGD PMID:11097477 RGD:1599264 NCBI chrNW_004624740:8,414,664...8,423,797
Ensembl chrNW_004624740:8,414,733...8,423,777
JBrowse link
G Atf4 activating transcription factor 4 ISO oxygen-glucose deprivation RGD PMID:20444431 RGD:13464322 NCBI chrNW_004624752:8,822,955...8,825,019
Ensembl chrNW_004624752:8,822,740...8,825,032
JBrowse link
G Atp5pb ATP synthase peripheral stalk-membrane subunit b ISO RGD PMID:29300489 RGD:13792656 NCBI chrNW_004624772:7,167,074...7,178,756
Ensembl chrNW_004624772:7,167,147...7,179,273
JBrowse link
G Atp7a ATPase copper transporting alpha ISO RGD PMID:21346155 RGD:11341705 NCBI chrNW_004624836:2,804,349...3,058,125
Ensembl chrNW_004624836:2,808,681...2,993,452
JBrowse link
G B3gat1 beta-1,3-glucuronyltransferase 1 ISO RGD PMID:21400481 RGD:14390075 NCBI chrNW_004624812:9,013,676...9,039,935
Ensembl chrNW_004624812:9,013,354...9,039,966
JBrowse link
G Bad BCL2 associated agonist of cell death involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624767:22,025,721...22,037,283
Ensembl chrNW_004624767:22,026,133...22,037,277
JBrowse link
G Bbc3 BCL2 binding component 3 involved_in ISO (PMID:20810912) UniProt PMID:20810912 NCBI chrNW_004624832:6,467,716...6,476,754
Ensembl chrNW_004624832:6,470,475...6,476,754
JBrowse link
G Bcl2 BCL2 apoptosis regulator acts_upstream_of_or_within ISO (PMID:7595537)
with serum deprivation
MGI
RGD
PMID:7595537 PMID:20669351 RGD:11353793 NCBI chrNW_004624792:8,854,345...9,032,727
Ensembl chrNW_004624792:8,859,522...9,031,344
JBrowse link
G Bcl2l1 BCL2 like 1 ISO with serum deprivation RGD PMID:20669351 RGD:11353793 NCBI chrNW_004624741:788,445...838,513
Ensembl chrNW_004624741:789,355...839,507
JBrowse link
G Bdkrb2 bradykinin receptor B2 ISO RGD PMID:19565561 RGD:4891057 NCBI chrNW_004624734:8,513,601...8,538,838
Ensembl chrNW_004624734:8,513,814...8,539,036
JBrowse link
G Bnip3 BCL2 interacting protein 3 involved_in
acts_upstream_of_or_within
ISO (PMID:20436456)
(PMID:19273585)
RGD
BHF-UCL
MGI
PMID:17379825 PMID:19273585 PMID:20436456 RGD:9685412 NCBI chrNW_004624737:14,848,355...14,863,731
Ensembl chrNW_004624737:14,848,350...14,862,965
JBrowse link
G Bnip3l BCL2 interacting protein 3 like involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:19273585) Ensembl
MGI
PMID:19273585 GO_REF:0000107 NCBI chrNW_004624758:21,284,165...21,309,957
Ensembl chrNW_004624758:21,284,167...21,310,398
JBrowse link
G Brip1 BRCA1 interacting helicase 1 ISO RGD PMID:12511571 RGD:11251702 NCBI chrNW_004624871:2,051,044...2,195,364
Ensembl chrNW_004624871:2,052,863...2,198,165
JBrowse link
G Cacnb3 calcium voltage-gated channel auxiliary subunit beta 3 ISO oxygen-glucose deprivation RGD PMID:23421680 RGD:13514095 NCBI chrNW_004624816:3,334,934...3,348,355
Ensembl chrNW_004624816:3,334,684...3,347,842
JBrowse link
G Casr calcium sensing receptor ISO RGD PMID:21073657 RGD:7206834 NCBI chrNW_004624912:485,252...613,572
Ensembl chrNW_004624912:485,258...614,656
JBrowse link
G Cav1 caveolin 1 ISO RGD PMID:29069575 RGD:151347449 NCBI chrNW_004624827:2,844,855...2,878,367
Ensembl chrNW_004624827:2,844,115...2,879,179
JBrowse link
G Cbl Cbl proto-oncogene ISO oxygen-glucose deprivation RGD PMID:24229686 RGD:11038824 NCBI chrNW_004624784:14,577,582...14,671,816
Ensembl chrNW_004624784:14,577,515...14,667,575
JBrowse link
G Cbs cystathionine beta-synthase involved_in ISO PMID:20149843 UniProt PMID:20149843 RGD:8554341 NCBI chrNW_004624745:27,676,430...27,687,573
Ensembl chrNW_004624745:27,673,748...27,688,462
JBrowse link
G Ccn1 cellular communication network factor 1 ISO RGD PMID:30371213 RGD:329845516 NCBI chrNW_004624742:11,882,815...11,885,686
Ensembl chrNW_004624742:11,882,907...11,885,667
JBrowse link
G Ccna2 cyclin A2 ISO RGD PMID:25289051 RGD:10054493 NCBI chrNW_004624777:2,097,002...2,104,244 JBrowse link
G Cdkn1b cyclin dependent kinase inhibitor 1B ISO RGD PMID:28854428 RGD:152025191 NCBI chrNW_004624752:25,202,474...25,207,107
Ensembl chrNW_004624752:25,203,474...25,207,114
JBrowse link
G Cflar CASP8 and FADD like apoptosis regulator ISO RGD PMID:12031707 RGD:8663470 NCBI chrNW_004624889:76,760...108,619
Ensembl chrNW_004624889:75,396...100,989
JBrowse link
G Cited2 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2 involved_in ISO (PMID:22735262) BHF-UCL PMID:22735262 NCBI chrNW_004624753:14,630,842...14,633,245
Ensembl chrNW_004624753:14,630,827...14,632,536
JBrowse link
G Clca1 chloride channel accessory 1 ISO RGD PMID:18616988 RGD:4188872 NCBI chrNW_004624742:11,145,406...11,172,369
Ensembl chrNW_004624742:11,145,413...11,172,369
JBrowse link
G Cpeb1 cytoplasmic polyadenylation element binding protein 1 involved_in ISO (MGI:5543770|PMID:18752464)
(PMID:18752464)
UniProt PMID:18752464 MGI:5543770 NCBI chrNW_004624768:18,386,415...18,468,879 JBrowse link
G Cpeb2 cytoplasmic polyadenylation element binding protein 2 involved_in ISO (PMID:18752464)
(MGI:5543770|PMID:18752464)
UniProt PMID:18752464 MGI:5543770 NCBI chrNW_004624755:16,732,561...16,791,108 JBrowse link
G Cysltr1 cysteinyl leukotriene receptor 1 ISO oxygen-glucose deprivation RGD PMID:17910051 RGD:5144007 NCBI chrNW_004624836:2,556,269...2,597,008 JBrowse link
G Cysltr2 cysteinyl leukotriene receptor 2 ISO oxygen-glucose deprivation RGD PMID:17910051 RGD:5144007 NCBI chrNW_004624748:6,040,564...6,043,454 JBrowse link
G Ddr2 discoidin domain receptor tyrosine kinase 2 ISO RGD PMID:18664364 RGD:150429768 NCBI chrNW_004624826:1,225,217...1,255,889
Ensembl chrNW_004624826:1,173,621...1,249,692
JBrowse link
G Dicer1 dicer 1, ribonuclease III ISO oxygen-glucose deprivation RGD PMID:26294080 RGD:11553310 NCBI chrNW_004624734:7,604,049...7,681,481
Ensembl chrNW_004624734:7,608,273...7,651,819
JBrowse link
G Dll4 delta like canonical Notch ligand 4 ISO oxygen-glucose deprivation RGD PMID:30653356 RGD:155663383 NCBI chrNW_004624804:8,179,729...8,189,001
Ensembl chrNW_004624804:8,179,731...8,191,284
JBrowse link
G Dnm1l dynamin 1 like ISO oxygen-glucose deprivation RGD PMID:23658809 RGD:12738215 NCBI chrNW_004624778:3,391,690...3,475,548 JBrowse link
G Dnmt3a DNA methyltransferase 3 alpha ISO RGD PMID:24282625 RGD:9589039 NCBI chrNW_004624738:7,481,084...7,581,332
Ensembl chrNW_004624738:7,485,842...7,581,056
JBrowse link
G Drd1 dopamine receptor D1 ISO RGD PMID:20969567 RGD:7248614 NCBI chrNW_004624733:14,517,540...14,522,173
Ensembl chrNW_004624733:14,518,146...14,520,905
JBrowse link
G E2f1 E2F transcription factor 1 ISO RGD PMID:19088195 RGD:2316261 NCBI chrNW_004624842:5,602,432...5,612,951
Ensembl chrNW_004624842:5,602,432...5,612,951
JBrowse link
G Edn1 endothelin 1 ISO RGD PMID:9551744 RGD:8662285 NCBI chrNW_004624756:13,842,482...13,849,003
Ensembl chrNW_004624756:13,842,164...13,849,029
JBrowse link
G Egln2 egl-9 family hypoxia inducible factor 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624925:708,920...716,084
Ensembl chrNW_004624925:707,583...716,456
JBrowse link
G Egln3 egl-9 family hypoxia inducible factor 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624838:2,819,719...2,848,094
Ensembl chrNW_004624838:2,819,631...2,847,827
JBrowse link
G Egr1 early growth response 1 ISO RGD PMID:21220915 RGD:5131857 NCBI chrNW_004624743:31,247,855...31,251,675
Ensembl chrNW_004624743:31,247,516...31,252,205
JBrowse link
G Eif4ebp1 eukaryotic translation initiation factor 4E binding protein 1 ISO RGD PMID:10100614 RGD:10401146 NCBI chrNW_004624780:5,543,117...5,561,285
Ensembl chrNW_004624780:5,543,117...5,561,261
JBrowse link
G Eln elastin ISO RGD PMID:16055482 RGD:9585727 NCBI chrNW_004624740:13,856,932...13,886,266 JBrowse link
G Endog endonuclease G ISO RGD PMID:17379825 RGD:9685412 NCBI chrNW_004624760:6,193,168...6,196,209
Ensembl chrNW_004624760:6,193,173...6,196,374
JBrowse link
G Eno1 enolase 1 involved_in ISO PMID:15459207 CAFA PMID:15459207 RGD:12793039 NCBI chrNW_004624818:3,223,384...3,235,128
Ensembl chrNW_004624818:3,223,308...3,238,419
JBrowse link
G Epas1 endothelial PAS domain protein 1 involved_in ISO
IEA
RGD
Ensembl
TreeGrafter
PMID:12099714 GO_REF:0000107 GO_REF:0000118 RGD:11041576 NCBI chrNW_004624738:27,747,770...27,831,213
Ensembl chrNW_004624738:27,747,696...27,834,054
JBrowse link
G Ero1a endoplasmic reticulum oxidoreductase 1 alpha ISO RGD PMID:12752442 RGD:10401130 NCBI chrNW_004624731:16,425,496...16,476,120
Ensembl chrNW_004624731:16,425,437...16,473,043
JBrowse link
G Fam162a family with sequence similarity 162 member A involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624912:739,804...763,149
Ensembl chrNW_004624912:739,917...762,939
JBrowse link
G Fas Fas cell surface death receptor ISO RGD PMID:12031707 RGD:8663470 NCBI chrNW_004624791:15,290,022...15,315,848
Ensembl chrNW_004624791:15,289,348...15,315,848
JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 ISO RGD PMID:31093967 RGD:155882597 NCBI chrNW_004624737:25,052,698...25,158,346
Ensembl chrNW_004624737:25,052,606...25,158,529
JBrowse link
G Flt1 fms related receptor tyrosine kinase 1 ISO RGD PMID:11981751 RGD:634296 NCBI chrNW_004624776:10,043,113...10,218,598
Ensembl chrNW_004624776:10,043,258...10,219,104
JBrowse link
G Fmn2 formin 2 involved_in ISO (PMID:23375502) UniProt PMID:23375502 NCBI chrNW_004624771:10,641,845...10,956,213
Ensembl chrNW_004624771:10,642,515...10,953,480
JBrowse link
G Fndc1 fibronectin type III domain containing 1 acts_upstream_of_or_within ISO PMID:19723622 MGI PMID:19723622 RGD:8554041 NCBI chrNW_004624929:395,766...495,288
Ensembl chrNW_004624929:395,705...460,563
JBrowse link
G Fos Fos proto-oncogene, AP-1 transcription factor subunit ISO RGD PMID:8593588 RGD:151347626 NCBI chrNW_004624734:26,424,053...26,427,431
Ensembl chrNW_004624734:26,423,079...26,427,732
JBrowse link
G Foxo3 forkhead box O3 ISO RGD PMID:24278276 RGD:10402204 NCBI chrNW_004624780:13,621,733...13,740,399
Ensembl chrNW_004624780:13,622,948...13,740,374
JBrowse link
G Fxn frataxin ISO RGD PMID:26071548 RGD:401793712 NCBI chrNW_004624736:4,027,054...4,047,881
Ensembl chrNW_004624736:4,027,354...4,047,854
JBrowse link
G Gad1 glutamate decarboxylase 1 ISO RGD PMID:11259512 RGD:401900595 NCBI chrNW_004624787:8,308,759...8,345,929
Ensembl chrNW_004624787:8,308,759...8,347,686
JBrowse link
G Gad2 glutamate decarboxylase 2 ISO RGD PMID:11259512 RGD:401900595 NCBI chrNW_004624796:2,700,443...2,771,757
Ensembl chrNW_004624796:2,703,614...2,771,555
JBrowse link
G Gata6 GATA binding protein 6 involved_in ISO (PMID:21127043) UniProt PMID:21127043 NCBI chrNW_004624770:9,772,818...9,799,837
Ensembl chrNW_004624770:9,772,818...9,798,259
JBrowse link
G Gnb1 G protein subunit beta 1 acts_upstream_of_or_within ISO PMID:19723622 MGI PMID:19723622 RGD:8554041 NCBI chrNW_004624818:7,937,061...8,002,798
Ensembl chrNW_004624818:7,936,932...8,003,433
JBrowse link
G Gngt1 G protein subunit gamma transducin 1 acts_upstream_of_or_within ISO PMID:19723622 MGI PMID:19723622 RGD:8554041 NCBI chrNW_004624813:579,173...594,039
Ensembl chrNW_004624813:590,580...594,085
JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:24011070) MGI
TreeGrafter
RGD
PMID:18248612 PMID:19220706 PMID:24011070 GO_REF:0000118 RGD:9068456 RGD:9068884 NCBI chrNW_004624734:39,414,458...39,471,705
Ensembl chrNW_004624734:39,411,824...39,471,705
JBrowse link
G Hif3a hypoxia inducible factor 3 subunit alpha NOT|involved_in ISO
IEA
(PMID:11573933) UniProt
TreeGrafter
PMID:11573933 GO_REF:0000118 NCBI chrNW_004624832:7,128,285...7,157,506
Ensembl chrNW_004624832:7,128,285...7,157,494
JBrowse link
G Higd1a HIG1 hypoxia inducible domain family member 1A acts_upstream_of_or_within ISO (PMID:16815968), (PMID:21856340)
(PMID:25683712)
MGI PMID:16815968 PMID:21856340 PMID:25683712 NCBI chrNW_004624730:76,944,785...76,954,873 JBrowse link
G Hilpda hypoxia inducible lipid droplet associated involved_in ISO (PMID:10690527) UniProt PMID:10690527 NCBI chrNW_004624783:7,536,257...7,538,380
Ensembl chrNW_004624783:7,536,167...7,538,418
JBrowse link
G Hmox1 heme oxygenase 1 involved_in ISO (PMID:12511571) UniProt PMID:12511571 NCBI chrNW_004624750:341,699...346,005
Ensembl chrNW_004624750:342,146...345,887
JBrowse link
G Hnf4a hepatocyte nuclear factor 4 alpha ISO RGD PMID:24177414 RGD:10445837 NCBI chrNW_004624790:10,039,344...10,065,167
Ensembl chrNW_004624790:10,038,999...10,100,649
JBrowse link
G Hp1bp3 heterochromatin protein 1 binding protein 3 involved_in ISO (PMID:25100860) UniProt PMID:25100860 NCBI chrNW_004624764:5,760,002...5,794,705 JBrowse link
G Hyou1 hypoxia up-regulated 1 involved_in ISO (PMID:9020069)
(PMID:10837345)
ParkinsonsUK-UCL PMID:9020069 PMID:10837345 NCBI chrNW_004624784:14,427,297...14,439,027
Ensembl chrNW_004624784:14,427,130...14,439,038
JBrowse link
G Icam1 intercellular adhesion molecule 1 ISO RGD PMID:20631551 RGD:8662392 NCBI chrNW_004624828:2,432,584...2,451,997
Ensembl chrNW_004624828:2,432,550...2,453,071
JBrowse link
G Il7 interleukin 7 ISO RGD PMID:19055876 RGD:10402937 NCBI chrNW_004624744:12,562,536...12,604,037
Ensembl chrNW_004624744:12,567,661...12,604,074
JBrowse link
G Inhba inhibin subunit beta A ISO RGD PMID:30765322 RGD:329849112 NCBI chrNW_004624740:19,458,835...19,482,570
Ensembl chrNW_004624740:19,464,289...19,482,888
JBrowse link
G Irak1 interleukin 1 receptor associated kinase 1 ISO RGD PMID:15793310 RGD:1579809 NCBI chrNW_004624946:613,392...618,459
Ensembl chrNW_004624946:613,890...618,445
JBrowse link
G Ireb2 iron responsive element binding protein 2 ISO oxygen-glucose deprivation RGD PMID:16135072 PMID:22159112 RGD:12904046 RGD:6893269 NCBI chrNW_004624894:2,446,014...2,498,650
Ensembl chrNW_004624894:2,445,704...2,499,009
JBrowse link
G Itpr1 inositol 1,4,5-trisphosphate receptor type 1 ISO RGD PMID:17285299 RGD:6482794 NCBI chrNW_004624773:14,856,803...15,193,173
Ensembl chrNW_004624773:14,856,804...15,193,168
JBrowse link
G Itpr2 inositol 1,4,5-trisphosphate receptor type 2 ISO RGD PMID:17285299 RGD:6482794 NCBI chrNW_004624752:12,360,796...12,820,042
Ensembl chrNW_004624752:12,360,740...12,822,287
JBrowse link
G Jun Jun proto-oncogene, AP-1 transcription factor subunit ISO RGD PMID:8593588 RGD:151347626 NCBI chrNW_004624862:1,537,886...1,540,633
Ensembl chrNW_004624862:1,538,455...1,539,426
JBrowse link
G Junb JunB proto-oncogene, AP-1 transcription factor subunit ISO RGD PMID:8593588 RGD:151347626 NCBI chrNW_004624901:402,969...404,741
Ensembl chrNW_004624901:403,235...404,269
JBrowse link
G Jund JunD proto-oncogene, AP-1 transcription factor subunit ISO RGD PMID:8593588 RGD:151347626 NCBI chrNW_004624908:1,572,628...1,574,205
Ensembl chrNW_004624908:1,573,174...1,574,113
JBrowse link
G Kcnd2 potassium voltage-gated channel subfamily D member 2 involved_in ISO PMID:25352783 UniProt PMID:25352783 RGD:10047379 NCBI chrNW_004624783:15,349,416...15,892,011
Ensembl chrNW_004624783:15,351,870...15,891,057
JBrowse link
G Kcnk2 potassium two pore domain channel subfamily K member 2 ISO RGD PMID:24705172 RGD:9831164 NCBI chrNW_004624771:20,040,685...20,166,992
Ensembl chrNW_004624771:19,984,857...20,164,021
JBrowse link
G Kcnk3 potassium two pore domain channel subfamily K member 3 ISO RGD PMID:12215606 RGD:2316539 NCBI chrNW_004624738:8,813,683...8,850,744
Ensembl chrNW_004624738:8,813,644...8,848,783
JBrowse link
G Kcnmb1 potassium calcium-activated channel subfamily M regulatory beta subunit 1 ISO RGD PMID:19461047 RGD:10412041 NCBI chrNW_004624733:19,582,646...19,593,581
Ensembl chrNW_004624733:19,582,489...19,597,722
JBrowse link
G Kcnn4 potassium calcium-activated channel subfamily N member 4 ISO RGD PMID:26439051 RGD:401794572 NCBI chrNW_004624907:1,266,348...1,279,258
Ensembl chrNW_004624907:1,266,348...1,278,699
JBrowse link
G Kdm6a lysine demethylase 6A ISO RGD PMID:30887465 RGD:151665136 NCBI chrNW_004624887:1,065,173...1,279,660
Ensembl chrNW_004624887:1,065,883...1,279,186
JBrowse link
G Lmna lamin A/C involved_in ISO (PMID:20810912) UniProt PMID:20810912 NCBI chrNW_004624885:1,423,563...1,466,657
Ensembl chrNW_004624885:1,447,395...1,467,554
JBrowse link
G LOC101709509 cytochrome b-245 heavy chain ISO RGD PMID:21302291 RGD:11040609 NCBI chrNW_004624762:17,759,625...17,793,434
Ensembl chrNW_004624762:17,757,404...17,793,467
JBrowse link
G LOC101714003 cytochrome c oxidase subunit 4 isoform 2, mitochondrial ISO RGD PMID:23303788 RGD:11344908 NCBI chrNW_004624741:852,104...863,660
Ensembl chrNW_004624741:850,551...861,313
JBrowse link
G Map3k7 mitogen-activated protein kinase kinase kinase 7 ISO oxygen-glucose deprivation RGD PMID:32734729 RGD:155804275 NCBI chrNW_004624799:3,554,644...3,623,317
Ensembl chrNW_004624799:3,554,678...3,622,289
JBrowse link
G Mdm4 MDM4 regulator of p53 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624807:6,480,785...6,522,149
Ensembl chrNW_004624807:6,486,333...6,522,801
JBrowse link
G Mfn1 mitofusin 1 ISO oxygen-glucose deprivation RGD PMID:23658809 PMID:27833818 RGD:12738215 RGD:12910766 NCBI chrNW_004624730:57,110,669...57,154,924
Ensembl chrNW_004624730:57,110,807...57,153,989
JBrowse link
G Mfn2 mitofusin 2 ISO oxygen-glucose deprivation RGD PMID:23658809 PMID:28478070 RGD:12738215 RGD:12910733 NCBI chrNW_004624818:1,041,371...1,065,061
Ensembl chrNW_004624818:1,041,369...1,065,023
JBrowse link
G Mgarp mitochondria localized glutamic acid rich protein involved_in ISO (MGI:3850758|PMID:19528298) UniProt PMID:19528298 MGI:3850758 NCBI chrNW_004624777:19,569,376...19,582,226 JBrowse link
G Mief1 mitochondrial elongation factor 1 ISO RGD PMID:25911325 RGD:12880381 NCBI chrNW_004624752:8,827,202...8,841,278
Ensembl chrNW_004624752:8,830,485...8,841,210
JBrowse link
G Mif macrophage migration inhibitory factor ISO RGD PMID:19462902 RGD:4890975 NCBI chrNW_004624747:10,307,826...10,308,649
Ensembl chrNW_004624747:10,303,919...10,308,821
JBrowse link
G Mpl MPL proto-oncogene, thrombopoietin receptor ISO RGD PMID:15642952 RGD:10449018 NCBI chrNW_004624892:2,656,260...2,671,455
Ensembl chrNW_004624892:2,656,260...2,669,946
JBrowse link
G Mst1 macrophage stimulating 1 ISO RGD PMID:23647599 RGD:10448278 NCBI chrNW_004624730:3,612,467...3,617,257
Ensembl chrNW_004624730:3,610,241...3,617,530
JBrowse link
G Mstn myostatin ISO RGD PMID:30765322 RGD:329849112 NCBI chrNW_004624854:5,893,051...5,899,380
Ensembl chrNW_004624854:5,892,938...5,899,473
JBrowse link
G Mtor mechanistic target of rapamycin kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624818:1,570,155...1,698,264
Ensembl chrNW_004624818:1,570,276...1,698,259
JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor involved_in ISO (PMID:15459207) CAFA PMID:15459207 NCBI chrNW_004624735:27,780,338...27,784,714
Ensembl chrNW_004624735:27,780,037...27,784,806
JBrowse link
G Myocd myocardin ISO RGD PMID:20621093 RGD:5132874 NCBI chrNW_004624877:618,789...647,471 JBrowse link
G Nampt nicotinamide phosphoribosyltransferase ISO oxygen-glucose deprivation RGD PMID:28528966 RGD:13781879 NCBI chrNW_004624739:23,411,478...23,444,590
Ensembl chrNW_004624739:23,411,488...23,442,359
JBrowse link
G Ndnf neuron derived neurotrophic factor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624777:1,036,389...1,072,271
Ensembl chrNW_004624777:1,035,991...1,072,996
JBrowse link
G Ndp norrin cystine knot growth factor NDP acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:30988181) MGI
Ensembl
PMID:30988181 GO_REF:0000107 NCBI chrNW_004624762:11,409,837...11,435,709
Ensembl chrNW_004624762:11,409,727...11,435,811
JBrowse link
G Ndrg1 N-myc downstream regulated 1 involved_in ISO (PMID:20810912) UniProt PMID:20810912 NCBI chrNW_004624735:22,734,365...22,782,247
Ensembl chrNW_004624735:22,734,228...22,782,347
JBrowse link
G Nfe2l2 NFE2 like bZIP transcription factor 2 involved_in ISO (PMID:24844779) RGD
BHF-UCL
PMID:23904790 PMID:24844779 RGD:10412703 NCBI chrNW_004624787:14,355,330...14,381,353
Ensembl chrNW_004624787:14,355,791...14,381,251
JBrowse link
G Ngb neuroglobin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624734:24,640,389...24,645,041
Ensembl chrNW_004624734:24,640,181...24,647,243
JBrowse link
G Nkx3-1 NK3 homeobox 1 involved_in ISO (PMID:21056661) UniProt PMID:21056661 NCBI chrNW_004624758:18,874,399...18,876,982
Ensembl chrNW_004624758:18,875,475...18,876,971
JBrowse link
G Nog noggin ISO RGD PMID:25740156 RGD:12801489 NCBI chrNW_004624795:11,696,102...11,697,367
Ensembl chrNW_004624795:11,696,353...11,697,051
JBrowse link
G Nono non-POU domain containing octamer binding ISO oxygen-glucose deprivation RGD PMID:32424772 RGD:155882459 NCBI chrNW_004624903:1,562,818...1,583,648
Ensembl chrNW_004624903:1,562,743...1,586,985
JBrowse link
G Nop53 NOP53 ribosome biogenesis factor involved_in ISO (PMID:22522597) UniProt PMID:22522597 NCBI chrNW_004624832:6,144,260...6,154,172
Ensembl chrNW_004624832:6,145,749...6,154,411
JBrowse link
G Notch1 notch receptor 1 involved_in ISO (MGI:5319604|PMID:18299578) UniProt PMID:18299578 MGI:5319604 NCBI chrNW_004624760:1,636,331...1,676,398
Ensembl chrNW_004624760:1,634,702...1,676,531
JBrowse link
G Npepps aminopeptidase puromycin sensitive involved_in ISO (PMID:21056661) UniProt PMID:21056661 NCBI chrNW_004624795:4,266,074...4,353,772
Ensembl chrNW_004624795:4,265,955...4,355,898
JBrowse link
G Npm1 nucleophosmin 1 ISO RGD PMID:21444791 RGD:11535018 NCBI chrNW_004624733:18,645,269...18,655,073 JBrowse link
G Opa1 OPA1 mitochondrial dynamin like GTPase ISO RGD PMID:27833818 RGD:12910766 NCBI chrNW_004624730:63,911,066...63,994,886
Ensembl chrNW_004624730:63,911,066...63,995,596
JBrowse link
G Oprd1 opioid receptor delta 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624764:12,604,051...12,676,368
Ensembl chrNW_004624764:12,604,164...12,676,279
JBrowse link
G P4hb prolyl 4-hydroxylase subunit beta involved_in ISO (PMID:12095988) BHF-UCL PMID:12095988 NCBI chrNW_004624801:10,700,301...10,712,889
Ensembl chrNW_004624801:10,699,161...10,712,896
JBrowse link
G Palld palladin, cytoskeletal associated protein ISO RGD PMID:16481593 RGD:2325785 NCBI chrNW_004624769:150,800...560,163
Ensembl chrNW_004624769:150,738...559,045
JBrowse link
G Park7 Parkinsonism associated deglycase ISO RGD PMID:29069575 RGD:151347449 NCBI chrNW_004624818:3,900,917...3,915,457
Ensembl chrNW_004624818:3,900,917...3,911,042
JBrowse link
G Pck1 phosphoenolpyruvate carboxykinase 1 ISO RGD PMID:24177414 RGD:10445837 NCBI chrNW_004624741:23,985,257...23,990,354
Ensembl chrNW_004624741:23,985,675...23,989,790
JBrowse link
G Pcmt1 protein-L-isoaspartate (D-aspartate) O-methyltransferase ISO RGD PMID:23647599 RGD:10448278 NCBI chrNW_004624785:8,267,328...8,326,550
Ensembl chrNW_004624785:8,263,113...8,326,549
JBrowse link
G Pgk1 phosphoglycerate kinase 1 involved_in ISO (PMID:11130727) CAFA PMID:11130727 NCBI chrNW_004624836:2,657,320...2,676,124
Ensembl chrNW_004624836:2,653,474...2,676,766
JBrowse link
G Phb2 prohibitin 2 ISO RGD PMID:25031298 RGD:12903263 NCBI chrNW_004624860:3,599,435...3,605,016
Ensembl chrNW_004624860:3,599,687...3,604,872
JBrowse link
G Pink1 PTEN induced kinase 1 involved_in ISO (PMID:24553947)
(MGI:5558956|PMID:24553947)
ParkinsonsUK-UCL PMID:24553947 MGI:5558956 NCBI chrNW_004624764:5,656,207...5,671,260
Ensembl chrNW_004624764:5,656,229...5,671,260
JBrowse link
G Plau plasminogen activator, urokinase ISO RGD PMID:19490965 RGD:7241802 NCBI chrNW_004624754:7,405,637...7,415,870
Ensembl chrNW_004624754:7,408,983...7,416,559
JBrowse link
G Pmaip1 phorbol-12-myristate-13-acetate-induced protein 1 involved_in ISO (PMID:14699081), (PMID:20810912) UniProt PMID:14699081 PMID:20810912 NCBI chrNW_004624792:5,330,289...5,338,067 JBrowse link
G Ppard peroxisome proliferator activated receptor delta acts_upstream_of_or_within ISO (PMID:24011070) MGI PMID:24011070 NCBI chrNW_004624754:22,021,465...22,084,320 JBrowse link
G Pparg peroxisome proliferator activated receptor gamma involved_in ISO PMID:29695452 BHF-UCL PMID:29695452 RGD:150521636 NCBI chrNW_004624956:84,673...207,176
Ensembl chrNW_004624956:83,842...149,481
JBrowse link
G Ppargc1a PPARG coactivator 1 alpha ISO RGD PMID:22527940 RGD:7242177 NCBI chrNW_004624755:7,826,219...8,460,746
Ensembl chrNW_004624755:8,375,596...8,465,297
JBrowse link
G Ppp1r15a protein phosphatase 1 regulatory subunit 15A ISO oxygen-glucose deprivation RGD PMID:21525936 RGD:10054236 NCBI chrNW_004624832:5,103,251...5,107,751
Ensembl chrNW_004624832:5,103,072...5,107,801
JBrowse link
G Prkaa1 protein kinase AMP-activated catalytic subunit alpha 1 ISO RGD PMID:17720864 RGD:2316813 NCBI chrNW_004624759:14,143,439...14,174,971
Ensembl chrNW_004624759:14,142,956...14,171,718
JBrowse link
G Prkce protein kinase C epsilon acts_upstream_of_or_within ISO (PMID:18070622) MGI PMID:18070622 NCBI chrNW_004624738:27,118,764...27,630,733
Ensembl chrNW_004624738:27,118,145...27,627,606
JBrowse link
G Prl prolactin involved_in ISO (PMID:24530842) AgBase PMID:24530842 NCBI chrNW_004624756:4,585,542...4,593,285 JBrowse link
G Pten phosphatase and tensin homolog acts_upstream_of_or_within ISO (PMID:24875179) MGI PMID:24875179 NCBI chrNW_004624791:13,975,235...14,056,900 JBrowse link
G Ptgis prostaglandin I2 synthase involved_in ISO
ISS
RGD
UniProt
PMID:19344900 GO_REF:0000024 RGD:401960096 NCBI chrNW_004624790:5,850,647...5,885,754
Ensembl chrNW_004624790:5,850,810...5,886,014
JBrowse link
G Ptgs2 prostaglandin-endoperoxide synthase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624814:6,897,818...6,904,890
Ensembl chrNW_004624814:6,897,857...6,903,728
JBrowse link
G Ptn pleiotrophin ISO RGD PMID:16226713 PMID:17925408 RGD:10044023 RGD:9834996 NCBI chrNW_004624765:17,523,086...17,625,264
Ensembl chrNW_004624765:17,522,916...17,548,184
JBrowse link
G Ptpn1 protein tyrosine phosphatase non-receptor type 1 ISO RGD PMID:18278556 RGD:401965430 NCBI chrNW_004624790:5,070,537...5,135,243
Ensembl chrNW_004624790:5,073,476...5,135,181
JBrowse link
G Ptprd protein tyrosine phosphatase receptor type D ISO RGD PMID:35848503 RGD:401976433 NCBI chrNW_004624736:12,874,884...13,558,030
Ensembl chrNW_004624736:12,874,706...13,278,956
JBrowse link
G Rgcc regulator of cell cycle involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624748:13,710,901...13,722,951
Ensembl chrNW_004624748:13,710,044...13,722,917
JBrowse link
G Rnf146 ring finger protein 146 ISO RGD PMID:26218637 RGD:13524866 NCBI chrNW_004624753:1,671,614...1,706,793 JBrowse link
G Robo1 roundabout guidance receptor 1 ISO oxygen-glucose deprivation RGD PMID:23994690 RGD:243048442 NCBI chrNW_004624874:4,234,640...5,359,333
Ensembl chrNW_004624874:4,949,538...5,357,690
JBrowse link
G Rora RAR related orphan receptor A involved_in ISO (PMID:18658046) UniProt PMID:18658046 NCBI chrNW_004624781:11,014,185...11,688,558
Ensembl chrNW_004624781:11,014,286...11,679,678
JBrowse link
G Rtn4 reticulon 4 involved_in ISO (MGI:6274961|PMID:27763637) UniProt PMID:27763637 MGI:6274961 NCBI chrNW_004624833:6,514,409...6,584,061 JBrowse link
G S100b S100 calcium binding protein B ISO RGD PMID:19910580 RGD:2325647 NCBI chrNW_004624745:31,645,927...31,652,846
Ensembl chrNW_004624745:31,645,927...31,652,832
JBrowse link
G Sdhd succinate dehydrogenase complex subunit D acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:15572694) MGI
Ensembl
PMID:15572694 GO_REF:0000107 NCBI chrNW_004624784:7,241,770...7,252,016
Ensembl chrNW_004624784:7,241,836...7,251,916
JBrowse link
G Serpine1 serpin family E member 1 ISO RGD PMID:10590062 RGD:8547811 NCBI chrNW_004624740:16,128,145...16,136,696
Ensembl chrNW_004624740:16,128,059...16,137,337
JBrowse link
G Sfrp1 secreted frizzled related protein 1 involved_in ISO (PMID:11932307) UniProt PMID:11932307 NCBI chrNW_004624780:2,133,105...2,172,301
Ensembl chrNW_004624780:2,132,960...2,174,508
JBrowse link
G Sirt1 sirtuin 1 involved_in ISO (PMID:20620956) UniProt PMID:20620956 NCBI chrNW_004624754:2,304,476...2,332,705
Ensembl chrNW_004624754:2,304,634...2,330,946
JBrowse link
G Sirt2 sirtuin 2 involved_in ISO (PMID:24681946) UniProt PMID:24681946 NCBI chrNW_004624794:12,239,363...12,259,561
Ensembl chrNW_004624794:12,235,263...12,259,276
JBrowse link
G Sirt4 sirtuin 4 ISO RGD PMID:24029877 RGD:9586053 NCBI chrNW_004624747:13,329,662...13,352,151
Ensembl chrNW_004624747:13,335,442...13,352,201
JBrowse link
G Slc11a2 solute carrier family 11 member 2 ISO RGD PMID:21325818 RGD:5688411 NCBI chrNW_004624816:1,345,020...1,389,615
Ensembl chrNW_004624816:1,345,006...1,384,299
JBrowse link
G Slc29a1 solute carrier family 29 member 1 (Augustine blood group) ISO RGD PMID:10646513 RGD:1598899 NCBI chrNW_004624754:15,623,960...15,636,377
Ensembl chrNW_004624754:15,624,429...15,632,996
JBrowse link
G Slc2a4 solute carrier family 2 member 4 ISO RGD PMID:20868366 RGD:7349316 NCBI chrNW_004624786:9,903,176...9,908,953
Ensembl chrNW_004624786:9,902,509...9,909,684
JBrowse link
G Slc8a1 solute carrier family 8 member A1 ISO RGD PMID:17394575 RGD:1642726 NCBI chrNW_004624738:21,648,277...22,026,385
Ensembl chrNW_004624738:21,651,489...21,939,927
JBrowse link
G Slc8a3 solute carrier family 8 member A3 involved_in ISO (MGI:5693358|PMID:24101730) UniProt PMID:24101730 MGI:5693358 NCBI chrNW_004624734:30,889,302...31,033,098
Ensembl chrNW_004624734:30,888,952...31,031,975
JBrowse link
G Slc9a1 solute carrier family 9 member A1 ISO RGD PMID:20868366 RGD:7349316 NCBI chrNW_004624764:11,041,118...11,095,892
Ensembl chrNW_004624764:11,039,051...11,095,885
JBrowse link
G Slit2 slit guidance ligand 2 ISO oxygen-glucose deprivation RGD PMID:26764532 RGD:11573340 NCBI chrNW_004624755:11,470,810...11,819,800
Ensembl chrNW_004624755:11,472,377...11,819,266
JBrowse link
G Src SRC proto-oncogene, non-receptor tyrosine kinase ISO RGD PMID:20380727 RGD:2324980 NCBI chrNW_004624842:2,212,561...2,260,514
Ensembl chrNW_004624842:2,211,020...2,230,132
JBrowse link
G Stc1 stanniocalcin 1 ISO RGD PMID:15485913 RGD:2324700 NCBI chrNW_004624758:19,035,478...19,047,633
Ensembl chrNW_004624758:19,035,338...19,047,871
JBrowse link
G Stc2 stanniocalcin 2 ISO RGD PMID:15485913 RGD:2324700 NCBI chrNW_004624733:16,773,422...16,787,475
Ensembl chrNW_004624733:16,773,644...16,785,214
JBrowse link
G Sumo1 small ubiquitin like modifier 1 ISO RGD PMID:17289031 RGD:9587773 NCBI chrNW_004624765:14,205,071...14,229,864
Ensembl chrNW_004624765:14,205,051...14,229,864
JBrowse link
G Suv39h1 SUV39H1 histone lysine methyltransferase acts_upstream_of_or_within ISO (PMID:21402781) MGI PMID:21402781 NCBI chrNW_004624893:499,222...512,341
Ensembl chrNW_004624893:498,973...512,443
JBrowse link
G Suv39h2 SUV39H2 histone lysine methyltransferase acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:21402781) MGI
Ensembl
PMID:21402781 GO_REF:0000107 NCBI chrNW_004624805:594,986...619,115
Ensembl chrNW_004624805:597,406...618,969
JBrowse link
G Tbl2 transducin beta like 2 involved_in ISO (PMID:25393282) ParkinsonsUK-UCL PMID:25393282 NCBI chrNW_004624740:14,210,310...14,218,600
Ensembl chrNW_004624740:14,210,246...14,219,701
JBrowse link
G Tert telomerase reverse transcriptase involved_in ISO (PMID:11313459) BHF-UCL
RGD
PMID:11313459 PMID:24376652 RGD:11038675 NCBI chrNW_004624751:624,569...647,198 JBrowse link
G Tgfb1 transforming growth factor beta 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624907:162,567...175,696
Ensembl chrNW_004624907:161,569...176,605
JBrowse link
G Tigar TP53 induced glycolysis regulatory phosphatase involved_in ISO (PMID:23185017) UniProt PMID:23185017 NCBI chrNW_004624860:1,416,419...1,455,953
Ensembl chrNW_004624860:1,417,131...1,457,717
JBrowse link
G Timp3 TIMP metallopeptidase inhibitor 3 ISO RGD PMID:28854428 RGD:152025191 NCBI chrNW_004624750:1,776,197...1,817,279
Ensembl chrNW_004624750:1,775,744...1,817,385
JBrowse link
G Tp53 tumor protein p53 involved_in ISO (PMID:20810912) RGD
UniProt
PMID:17289031 PMID:20810912 RGD:9587773 NCBI chrNW_004624786:10,266,316...10,282,664
Ensembl chrNW_004624786:10,263,518...10,271,218
JBrowse link
G Trem2 triggering receptor expressed on myeloid cells 2 involved_in ISO PMID:31900229 ARUK-UCL PMID:31900229 RGD:126781734 NCBI chrNW_004624754:17,643,397...17,649,255
Ensembl chrNW_004624754:17,643,363...17,648,231
JBrowse link
G Trpc1 transient receptor potential cation channel subfamily C member 1 ISO RGD PMID:19889962 RGD:7247600 NCBI chrNW_004624730:19,307,346...19,375,537 JBrowse link
G Trpc6 transient receptor potential cation channel subfamily C member 6 ISO RGD PMID:19889962 RGD:7247600 NCBI chrNW_004624878:1,321,022...1,469,964
Ensembl chrNW_004624878:1,321,497...1,468,865
JBrowse link
G Twist1 twist family bHLH transcription factor 1 involved_in ISO (MGI:5284765|PMID:18297062)
(PMID:18297062)
BHF-UCL PMID:18297062 MGI:5284765 NCBI chrNW_004624739:11,352,040...11,354,019
Ensembl chrNW_004624739:11,352,141...11,352,809
JBrowse link
G Ubqln1 ubiquilin 1 involved_in ISO (PMID:12095988) BHF-UCL PMID:12095988 NCBI chrNW_004624809:6,434,842...6,487,442
Ensembl chrNW_004624809:6,436,658...6,487,251
JBrowse link
G Ucn2 urocortin 2 ISO RGD PMID:14519439 RGD:2306174 NCBI chrNW_004624730:2,567,154...2,568,387 JBrowse link
G Ucn3 urocortin 3 ISO RGD PMID:14519439 RGD:2306174 NCBI chrNW_004624796:130,924...131,886 JBrowse link
G Vasn vasorin acts_upstream_of_or_within ISO (PMID:21658601) MGI PMID:21658601 NCBI chrNW_004624824:2,154,646...2,164,796
Ensembl chrNW_004624824:2,155,589...2,164,796
JBrowse link
G Vegfa vascular endothelial growth factor A acts_upstream_of_or_within
involved_in
ISO (PMID:10575000)
(PMID:19652095)
MGI
BHF-UCL
PMID:10575000 PMID:19652095 NCBI chrNW_004624754:15,929,414...15,943,637 JBrowse link
G Vldlr very low density lipoprotein receptor ISO RGD PMID:19233325 RGD:2324641 NCBI chrNW_004624736:7,280,478...7,316,897
Ensembl chrNW_004624736:7,280,490...7,316,946
JBrowse link
G Zfp36l1 ZFP36 ring finger protein like 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624734:32,251,100...32,256,458
Ensembl chrNW_004624734:32,251,114...32,257,211
JBrowse link
cellular response to oxygen-glucose deprivation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acvr2a activin A receptor type 2A ISO RGD PMID:27769861 RGD:329853763 NCBI chrNW_004624866:539,967...619,575
Ensembl chrNW_004624866:539,894...620,302
JBrowse link
G Becn1 beclin 1 ISO protein:increased expression:neuronal PC12 cells (rat) RGD PMID:27769861 RGD:329853763 NCBI chrNW_004624795:1,386,154...1,406,314
Ensembl chrNW_004624795:1,385,756...1,405,714
JBrowse link
G Inhba inhibin subunit beta A ISO protein:increased expression:neuronal PC12 cells (rat) RGD PMID:27769861 RGD:329853763 NCBI chrNW_004624740:19,458,835...19,482,570
Ensembl chrNW_004624740:19,464,289...19,482,888
JBrowse link
G Map1lc3a microtubule associated protein 1 light chain 3 alpha ISO protein:increased expression:neuronal PC12 cells (rat) RGD PMID:27769861 RGD:329853763 NCBI chrNW_004624842:4,800,533...4,802,235
Ensembl chrNW_004624842:4,800,539...4,802,094
JBrowse link
G Mapk8 mitogen-activated protein kinase 8 ISO RGD PMID:27769861 RGD:329853763 NCBI chrNW_004624928:1,442,216...1,494,275
Ensembl chrNW_004624928:1,439,146...1,494,266
JBrowse link
G Oaz1 ornithine decarboxylase antizyme 1 ISO RGD PMID:19531214 RGD:401851038 NCBI chrNW_004624828:6,617,342...6,620,466
Ensembl chrNW_004624828:6,617,727...6,620,402
JBrowse link
detection of hypoxia term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eng endoglin involved_in ISO (PMID:18156205) BHF-UCL PMID:18156205 NCBI chrNW_004624760:7,703,979...7,735,636
Ensembl chrNW_004624760:7,703,820...7,734,457
JBrowse link
G Tgfb3 transforming growth factor beta 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624734:25,717,011...25,739,942
Ensembl chrNW_004624734:25,716,972...25,739,199
JBrowse link
hypoxia-inducible factor-1alpha signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hif1a hypoxia inducible factor 1 subunit alpha acts_upstream_of_or_within ISO (PMID:8470821) MGI PMID:8470821 NCBI chrNW_004624734:39,414,458...39,471,705
Ensembl chrNW_004624734:39,411,824...39,471,705
JBrowse link
G LOC101709509 cytochrome b-245 heavy chain ISO RGD PMID:21302291 RGD:11040609 NCBI chrNW_004624762:17,759,625...17,793,434
Ensembl chrNW_004624762:17,757,404...17,793,467
JBrowse link
G Pdk1 pyruvate dehydrogenase kinase 1 involved_in ISO (PMID:21763680) UniProt PMID:21763680 NCBI chrNW_004624787:9,917,366...9,956,393
Ensembl chrNW_004624787:9,917,309...9,959,875
JBrowse link
G Pdk3 pyruvate dehydrogenase kinase 3 involved_in ISO (PMID:18718909) UniProt PMID:18718909 NCBI chrNW_004624897:759,367...833,947 JBrowse link
G Vhl von Hippel-Lindau tumor suppressor acts_upstream_of ISO (PMID:25186293) MGI PMID:25186293 NCBI chrNW_004624731:5,350,912...5,359,286 JBrowse link
intrinsic apoptotic signaling pathway in response to hypoxia term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atf2 activating transcription factor 2 involved_in ISO (PMID:17189429) MGI PMID:17189429 NCBI chrNW_004624787:12,241,838...12,338,089 JBrowse link
G Bnip3 BCL2 interacting protein 3 involved_in ISO (PMID:20436456) BHF-UCL PMID:20436456 NCBI chrNW_004624737:14,848,355...14,863,731
Ensembl chrNW_004624737:14,848,350...14,862,965
JBrowse link
G Tp53 tumor protein p53 acts_upstream_of_or_within ISO (PMID:20935145) MGI PMID:20935145 NCBI chrNW_004624786:10,266,316...10,282,664
Ensembl chrNW_004624786:10,263,518...10,271,218
JBrowse link
negative regulation of cellular response to hypoxia term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Daxx death domain associated protein ISO cell death RGD PMID:17289031 RGD:9587773 NCBI chrNW_004624754:23,504,465...23,509,034
Ensembl chrNW_004624754:23,505,386...23,509,241
JBrowse link
G Ddah1 dimethylarginine dimethylaminohydrolase 1 involved_in ISO (PMID:24895913) BHF-UCL PMID:24895913 NCBI chrNW_004624742:12,027,450...12,170,003
Ensembl chrNW_004624742:12,026,248...12,170,147
JBrowse link
G Drd1 dopamine receptor D1 ISO cell death RGD PMID:27638511 RGD:13506952 NCBI chrNW_004624733:14,517,540...14,522,173
Ensembl chrNW_004624733:14,518,146...14,520,905
JBrowse link
G Drd2 dopamine receptor D2 ISO cell death RGD PMID:27638511 RGD:13506952 NCBI chrNW_004624784:8,828,589...8,906,617
Ensembl chrNW_004624784:8,827,006...8,865,529
JBrowse link
G Epha4 EPH receptor A4 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:31150684) Ensembl
ARUK-UCL
PMID:31150684 GO_REF:0000107 NCBI chrNW_004624823:3,555,273...3,697,794
Ensembl chrNW_004624823:3,555,288...3,698,990
JBrowse link
G Nfe2l2 NFE2 like bZIP transcription factor 2 ISO cell death RGD PMID:24048861 RGD:10412727 NCBI chrNW_004624787:14,355,330...14,381,353
Ensembl chrNW_004624787:14,355,791...14,381,251
JBrowse link
G Ogt O-linked N-acetylglucosamine (GlcNAc) transferase ISO cell death RGD PMID:18539296 RGD:9590185 NCBI chrNW_004624903:1,863,110...1,912,299
Ensembl chrNW_004624903:1,863,337...1,910,177
JBrowse link
negative regulation of hypoxia-induced intrinsic apoptotic signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eno1 enolase 1 involved_in ISO (PMID:15459207) CAFA PMID:15459207 NCBI chrNW_004624818:3,223,384...3,235,128
Ensembl chrNW_004624818:3,223,308...3,238,419
JBrowse link
G Hyou1 hypoxia up-regulated 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624784:14,427,297...14,439,027
Ensembl chrNW_004624784:14,427,130...14,439,038
JBrowse link
G Kdm6a lysine demethylase 6A ISO RGD PMID:30887465 RGD:151665136 NCBI chrNW_004624887:1,065,173...1,279,660
Ensembl chrNW_004624887:1,065,883...1,279,186
JBrowse link
G Map2k1 mitogen-activated protein kinase kinase 1 involved_in ISO PMID:15459207 CAFA PMID:15459207 RGD:12793039 NCBI chrNW_004624781:6,222,365...6,285,398
Ensembl chrNW_004624781:6,222,365...6,285,531
JBrowse link
G Pik3cb phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit beta involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624730:15,226,786...15,399,097
Ensembl chrNW_004624730:15,226,379...15,355,857
JBrowse link
G Pink1 PTEN induced kinase 1 involved_in ISO (MGI:5558956|PMID:24553947) ParkinsonsUK-UCL PMID:24553947 MGI:5558956 NCBI chrNW_004624764:5,656,207...5,671,260
Ensembl chrNW_004624764:5,656,229...5,671,260
JBrowse link
G Tmbim6 transmembrane BAX inhibitor motif containing 6 involved_in ISO (PMID:21075086) ParkinsonsUK-UCL PMID:21075086 NCBI chrNW_004624816:2,519,839...2,540,766 JBrowse link
negative regulation of hypoxia-inducible factor-1alpha signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Commd1 copper metabolism domain containing 1 acts_upstream_of_or_within ISO (PMID:17371845) MGI PMID:17371845 NCBI chrNW_004624762:11,302,730...11,407,074 JBrowse link
G Vhl von Hippel-Lindau tumor suppressor acts_upstream_of_or_within ISO (PMID:25186293) MGI PMID:25186293 NCBI chrNW_004624731:5,350,912...5,359,286 JBrowse link
positive regulation of cellular response to hypoxia term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dnmt3a DNA methyltransferase 3 alpha ISO oxygen-glucose deprivation-induced cell death RGD PMID:23516428 RGD:9589049 NCBI chrNW_004624738:7,481,084...7,581,332
Ensembl chrNW_004624738:7,485,842...7,581,056
JBrowse link
G Kcnk2 potassium two pore domain channel subfamily K member 2 ISO RGD PMID:24705172 RGD:9831164 NCBI chrNW_004624771:20,040,685...20,166,992
Ensembl chrNW_004624771:19,984,857...20,164,021
JBrowse link
positive regulation of hypoxia-inducible factor-1alpha signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rwdd3 RWD domain containing 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:22009797) TreeGrafter
MGI
InterPro
PMID:22009797 GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004624742:2,407,055...2,420,425
Ensembl chrNW_004624742:2,407,512...2,458,249
JBrowse link
positive regulation of proteasomal ubiquitin-dependent protein catabolic process involved in cellular response to hypoxia term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Plk3 polo like kinase 3 involved_in ISO (PMID:20889502) UniProt PMID:20889502 NCBI chrNW_004624906:678,517...693,644
Ensembl chrNW_004624906:688,707...693,326
JBrowse link
regulation of cellular response to hypoxia term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ajuba ajuba LIM protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624820:9,551,664...9,562,773
Ensembl chrNW_004624820:9,552,287...9,563,472
JBrowse link
G Chchd2 coiled-coil-helix-coiled-coil-helix domain containing 2 involved_in ISO (PMID:23303788) UniProt PMID:23303788 NCBI chrNW_004624740:8,279,416...8,283,730
Ensembl chrNW_004624740:8,278,078...8,283,657
JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha ISO RGD PMID:18054269 RGD:9068899 NCBI chrNW_004624734:39,414,458...39,471,705
Ensembl chrNW_004624734:39,411,824...39,471,705
JBrowse link
G Rock2 Rho associated coiled-coil containing protein kinase 2 involved_in ISO (MGI:6271078|PMID:29353861) ARUK-UCL PMID:29353861 MGI:6271078 NCBI chrNW_004624865:4,461,200...4,591,309
Ensembl chrNW_004624865:4,461,215...4,588,836
JBrowse link
G Stat3 signal transducer and activator of transcription 3 ISO RGD PMID:19450559 RGD:7242910 NCBI chrNW_004624795:1,648,235...1,680,788
Ensembl chrNW_004624795:1,648,080...1,681,200
JBrowse link
G Usp19 ubiquitin specific peptidase 19 involved_in ISO (PMID:22128162) UniProt PMID:22128162 NCBI chrNW_004624730:3,134,419...3,145,512
Ensembl chrNW_004624730:3,133,595...3,146,221
JBrowse link
G Vhl von Hippel-Lindau tumor suppressor involved_in ISO (PMID:10205047) DisProt PMID:10205047 NCBI chrNW_004624731:5,350,912...5,359,286 JBrowse link
response to anoxia term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccn2 cellular communication network factor 2 ISO RGD PMID:18929865 RGD:2314608 NCBI chrNW_004624753:6,022,033...6,024,866
Ensembl chrNW_004624753:6,023,069...6,024,833
JBrowse link
G Oxtr oxytocin receptor ISO RGD PMID:18655887 RGD:2304092 NCBI chrNW_004624731:3,367,645...3,384,815
Ensembl chrNW_004624731:3,370,701...3,385,640
JBrowse link
response to hypobaric hypoxia term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adam15 ADAM metallopeptidase domain 15 ISO RGD PMID:22230263 RGD:13703065 NCBI chrNW_004624885:2,441,298...2,451,061
Ensembl chrNW_004624885:2,441,217...2,451,057
JBrowse link
G Adam17 ADAM metallopeptidase domain 17 ISO RGD PMID:22230263 RGD:13703065 NCBI chrNW_004624969:212,089...254,532
Ensembl chrNW_004624969:212,321...253,328
JBrowse link
G Creb1 cAMP responsive element binding protein 1 ISO RGD PMID:22523357 RGD:155226858 NCBI chrNW_004624765:8,374,160...8,436,969 JBrowse link
G Dnm1l dynamin 1 like ISO RGD PMID:24637344 RGD:12738213 NCBI chrNW_004624778:3,391,690...3,475,548 JBrowse link
G Fis1 fission, mitochondrial 1 ISO RGD PMID:24361501 RGD:12738138 NCBI chrNW_004624740:16,052,777...16,056,438
Ensembl chrNW_004624740:16,052,820...16,057,098
JBrowse link
G Hsf1 heat shock transcription factor 1 ISO RGD PMID:24590457 RGD:10402551 NCBI chrNW_004624735:12,536,818...12,562,643
Ensembl chrNW_004624735:12,537,128...12,562,644
JBrowse link
G Ireb2 iron responsive element binding protein 2 ISO RGD PMID:27925282 RGD:12902631 NCBI chrNW_004624894:2,446,014...2,498,650
Ensembl chrNW_004624894:2,445,704...2,499,009
JBrowse link
G Mfn1 mitofusin 1 ISO RGD PMID:24637344 RGD:12738213 NCBI chrNW_004624730:57,110,669...57,154,924
Ensembl chrNW_004624730:57,110,807...57,153,989
JBrowse link
G Mfn2 mitofusin 2 ISO RGD PMID:24637344 RGD:12738213 NCBI chrNW_004624818:1,041,371...1,065,061
Ensembl chrNW_004624818:1,041,369...1,065,023
JBrowse link
G Ppargc1a PPARG coactivator 1 alpha ISO RGD PMID:22523357 RGD:155226858 NCBI chrNW_004624755:7,826,219...8,460,746
Ensembl chrNW_004624755:8,375,596...8,465,297
JBrowse link
response to hypoxia term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abat 4-aminobutyrate aminotransferase ISO RGD PMID:10727784 RGD:1598521 NCBI chrNW_004624824:6,112,644...6,202,936
Ensembl chrNW_004624824:6,141,213...6,202,936
JBrowse link
G Abcc9 ATP binding cassette subfamily C member 9 acts_upstream_of_or_within ISO (PMID:20123112)
(PMID:20935152)
MGI PMID:20123112 PMID:20935152 NCBI chrNW_004624752:16,792,202...16,926,552
Ensembl chrNW_004624752:16,792,165...16,927,293
JBrowse link
G Ace angiotensin I converting enzyme ISO RGD PMID:14527966 RGD:1358270 NCBI chrNW_004624849:998,262...1,019,305
Ensembl chrNW_004624849:998,277...1,019,521
JBrowse link
G Acsl6 acyl-CoA synthetase long chain family member 6 ISO RGD PMID:15942958 RGD:1598733 NCBI chrNW_004624733:40,105,795...40,157,108
Ensembl chrNW_004624733:40,105,806...40,160,221
JBrowse link
G Actn4 actinin alpha 4 ISO RGD PMID:15942958 RGD:1598733 NCBI chrNW_004624794:12,042,627...12,113,762
Ensembl chrNW_004624794:12,042,533...12,113,886
JBrowse link
G Acvrl1 activin A receptor like type 1 ISO RGD PMID:17515860 RGD:2303144 NCBI chrNW_004624816:402,412...426,217
Ensembl chrNW_004624816:404,358...426,217
JBrowse link
G Ada adenosine deaminase involved_in ISO (PMID:16670267) RGD
UniProt
PMID:16670267 PMID:20735412 RGD:5128862 NCBI chrNW_004624790:9,809,550...9,829,199
Ensembl chrNW_004624790:9,809,492...9,829,883
JBrowse link
G Adam17 ADAM metallopeptidase domain 17 involved_in ISO (PMID:18276953) BHF-UCL PMID:18276953 NCBI chrNW_004624969:212,089...254,532
Ensembl chrNW_004624969:212,321...253,328
JBrowse link
G Adipoq adiponectin, C1Q and collagen domain containing ISO RGD PMID:16785610 RGD:1599143 NCBI chrNW_004624730:69,941,963...69,959,266
Ensembl chrNW_004624730:69,941,001...69,957,012
JBrowse link
G Adm adrenomedullin ISO RGD PMID:17251392 RGD:1625295 NCBI chrNW_004624766:2,402,152...2,404,343
Ensembl chrNW_004624766:2,401,769...2,404,446
JBrowse link
G Adora1 adenosine A1 receptor ISO RGD PMID:16690710 RGD:5129101 NCBI chrNW_004624807:7,674,164...7,705,736
Ensembl chrNW_004624807:7,674,927...7,705,051
JBrowse link
G Adrb2 adrenoceptor beta 2 ISO RGD PMID:21562317 RGD:7175065 NCBI chrNW_004624774:8,211,723...8,215,962
Ensembl chrNW_004624774:8,211,984...8,213,240
JBrowse link
G Adsl adenylosuccinate lyase ISO RGD PMID:8887278 RGD:1598763 NCBI chrNW_004624752:8,098,612...8,117,635
Ensembl chrNW_004624752:8,098,088...8,118,091
JBrowse link
G Ager advanced glycosylation end-product specific receptor acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:18323529) MGI
Ensembl
PMID:18323529 GO_REF:0000107 NCBI chrNW_004624754:24,138,086...24,140,900 JBrowse link
G Ago2 argonaute RISC catalytic component 2 ISO RGD PMID:21969601 RGD:401900683 NCBI chrNW_004624735:15,785,831...15,853,854
Ensembl chrNW_004624735:15,785,114...15,842,435
JBrowse link
G Agtrap angiotensin II receptor associated protein ISO RGD PMID:17033689 RGD:1625355 NCBI chrNW_004624818:1,226,876...1,239,975
Ensembl chrNW_004624818:1,228,175...1,240,059
JBrowse link
G Ahcy adenosylhomocysteinase ISO RGD PMID:10646513 RGD:1598899 NCBI chrNW_004624842:5,053,336...5,071,902
Ensembl chrNW_004624842:5,053,280...5,072,679
JBrowse link
G Ajuba ajuba LIM protein involved_in IEA TreeGrafter
Ensembl
GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624820:9,551,664...9,562,773
Ensembl chrNW_004624820:9,552,287...9,563,472
JBrowse link
G Akt2 AKT serine/threonine kinase 2 ISO RGD PMID:29676955 RGD:13703029 NCBI chrNW_004624925:262,590...322,440
Ensembl chrNW_004624925:273,881...326,984
JBrowse link
G Alad aminolevulinate dehydratase ISO RGD PMID:3697363 RGD:4144802 NCBI chrNW_004624760:21,698,689...21,709,907
Ensembl chrNW_004624760:21,698,587...21,711,822
JBrowse link
G Alas1 5'-aminolevulinate synthase 1 ISO RGD PMID:9849899 RGD:2306420 NCBI chrNW_004624730:5,984,764...5,998,929
Ensembl chrNW_004624730:5,984,766...6,001,667
JBrowse link
G Alas2 5'-aminolevulinate synthase 2 involved_in ISO
IEA
RGD
Ensembl
PMID:17095594 GO_REF:0000107 RGD:1599040 NCBI chrNW_004624910:426,273...726,778
Ensembl chrNW_004624910:426,032...448,325
JBrowse link
G Aldoc aldolase, fructose-bisphosphate C ISO RGD PMID:17053973 RGD:2301133 NCBI chrNW_004624786:1,158,270...1,162,801
Ensembl chrNW_004624786:1,158,248...1,162,916
JBrowse link
G Alkbh5 alkB homolog 5, RNA demethylase involved_in ISO (PMID:21264265) UniProt PMID:21264265 NCBI chrNW_004624849:3,257,460...3,280,870
Ensembl chrNW_004624849:3,257,459...3,280,245
JBrowse link
G Angpt1 angiopoietin 1 ISO RGD PMID:11129953 RGD:1626169 NCBI chrNW_004624763:22,645,807...22,818,592
Ensembl chrNW_004624763:22,646,231...22,718,294
JBrowse link
G Angpt2 angiopoietin 2 ISO hypoxic retina RGD PMID:17943991 RGD:2314202 NCBI chrNW_004624861:4,457,519...4,510,035
Ensembl chrNW_004624861:4,457,158...4,509,623
JBrowse link
G Angptl4 angiopoietin like 4 ISO RGD PMID:17033689 RGD:1625355 NCBI chrNW_004624828:1,152,788...1,158,864
Ensembl chrNW_004624828:1,152,891...1,158,420
JBrowse link
G Apaf1 apoptotic peptidase activating factor 1 ISO RGD PMID:18325779 RGD:2325740 NCBI chrNW_004624750:8,835,521...8,940,957
Ensembl chrNW_004624750:8,837,037...8,938,009
JBrowse link
G Apold1 apolipoprotein L domain containing 1 ISO RGD PMID:15102925 RGD:1303988 NCBI chrNW_004624752:25,139,100...25,144,958
Ensembl chrNW_004624752:25,140,932...25,145,333
JBrowse link
G Arg2 arginase 2 ISO RGD PMID:20039818 RGD:4143278 NCBI chrNW_004624734:33,321,161...33,352,306
Ensembl chrNW_004624734:33,321,295...33,352,277
JBrowse link
G Arnt aryl hydrocarbon receptor nuclear translocator involved_in
acts_upstream_of_or_within
ISO (PMID:8756616)
(PMID:8702901)
BHF-UCL
MGI
RGD
PMID:8702901 PMID:8756616 PMID:10873592 RGD:2301216 NCBI chrNW_004624772:18,949,221...19,016,672
Ensembl chrNW_004624772:18,949,108...19,015,504
JBrowse link
G Arnt2 aryl hydrocarbon receptor nuclear translocator 2 involved_in ISO (PMID:12239177) UniProt
RGD
PMID:10873592 PMID:12239177 RGD:2301216 NCBI chrNW_004624768:21,166,554...21,319,462
Ensembl chrNW_004624768:21,166,554...21,319,594
JBrowse link
G Ascl2 achaete-scute family bHLH transcription factor 2 involved_in ISO (PMID:14561729) UniProt PMID:14561729 NCBI chrNW_004624767:15,107,157...15,111,696
Ensembl chrNW_004624767:15,107,159...15,109,191
JBrowse link
G Atm ATM serine/threonine kinase ISO RGD PMID:16651613 RGD:1599365 NCBI chrNW_004624784:2,933,172...3,080,131
Ensembl chrNW_004624784:2,937,499...3,078,216
JBrowse link
G Atp1b1 ATPase Na+/K+ transporting subunit beta 1 ISO RGD PMID:12573531 RGD:631759 NCBI chrNW_004624826:7,058,046...7,076,919
Ensembl chrNW_004624826:7,054,371...7,076,919
JBrowse link
G Bad BCL2 associated agonist of cell death ISO RGD PMID:16005992 RGD:2292692 NCBI chrNW_004624767:22,025,721...22,037,283
Ensembl chrNW_004624767:22,026,133...22,037,277
JBrowse link
G Bax BCL2 associated X, apoptosis regulator ISO RGD PMID:24089674 RGD:155882465 NCBI chrNW_004624832:5,050,222...5,068,565
Ensembl chrNW_004624832:5,050,222...5,055,506
JBrowse link
G Bcl2 BCL2 apoptosis regulator ISO RGD PMID:16445580 PMID:24089674 RGD:155882465 RGD:1599476 NCBI chrNW_004624792:8,854,345...9,032,727
Ensembl chrNW_004624792:8,859,522...9,031,344
JBrowse link
G Bcl2l1 BCL2 like 1 ISO RGD PMID:17272823 RGD:1643524 NCBI chrNW_004624741:788,445...838,513
Ensembl chrNW_004624741:789,355...839,507
JBrowse link
G Bdnf brain derived neurotrophic factor ISO RGD PMID:14699417 RGD:4891114 NCBI chrNW_004624766:17,281,882...17,330,601
Ensembl chrNW_004624766:17,279,630...17,330,490
JBrowse link
G Becn1 beclin 1 ISO RGD PMID:22449108 RGD:6483050 NCBI chrNW_004624795:1,386,154...1,406,314
Ensembl chrNW_004624795:1,385,756...1,405,714
JBrowse link
G Birc2 baculoviral IAP repeat containing 2 ISO RGD PMID:12023884 RGD:631960 NCBI chrNW_004624878:476,460...514,637 JBrowse link
G Bmp2 bone morphogenetic protein 2 acts_upstream_of_or_within ISO (PMID:20042692) MGI PMID:20042692 NCBI chrNW_004624741:7,706,205...7,717,677
Ensembl chrNW_004624741:7,706,236...7,719,484
JBrowse link
G Bnip3 BCL2 interacting protein 3 involved_in ISO PMID:14972662 UniProt PMID:14972662 RGD:2314028 NCBI chrNW_004624737:14,848,355...14,863,731
Ensembl chrNW_004624737:14,848,350...14,862,965
JBrowse link
G Ca9 carbonic anhydrase 9 ISO RGD PMID:18071747 RGD:2293203 NCBI chrNW_004624868:5,110,602...5,131,167
Ensembl chrNW_004624868:5,109,846...5,116,949
JBrowse link
G Camk2g calcium/calmodulin dependent protein kinase II gamma ISO RGD PMID:11925434 RGD:724615 NCBI chrNW_004624754:7,325,828...7,380,870
Ensembl chrNW_004624754:7,325,470...7,380,876
JBrowse link
G Casp9 caspase 9 ISO RGD PMID:24089674 RGD:155882465 NCBI chrNW_004624764:1,769,270...1,789,399
Ensembl chrNW_004624764:1,773,455...1,789,423
JBrowse link
G Cat catalase ISO RGD PMID:18270324 RGD:5130774 NCBI chrNW_004624767:12,680,940...12,715,468
Ensembl chrNW_004624767:12,680,953...12,715,739
JBrowse link
G Cav1 caveolin 1 acts_upstream_of_or_within ISO (PMID:16601228) MGI PMID:16601228 NCBI chrNW_004624827:2,844,855...2,878,367
Ensembl chrNW_004624827:2,844,115...2,879,179
JBrowse link
G Cav3 caveolin 3 ISO RGD PMID:29438664 RGD:126925221 NCBI chrNW_004624731:3,348,172...3,363,772
Ensembl chrNW_004624731:3,347,984...3,364,581
JBrowse link
G Cbfa2t3 CBFA2/RUNX1 partner transcriptional co-repressor 3 involved_in ISO (PMID:23840896) UniProt PMID:23840896 NCBI chrNW_004624746:716,848...773,169
Ensembl chrNW_004624746:716,836...773,169
JBrowse link
G Cd24 CD24 molecule involved_in ISS UniProt GO_REF:0000024 NCBI chrNW_004624780:15,287,426...15,292,292
Ensembl chrNW_004624780:15,287,433...15,292,292
JBrowse link
G Cd38 CD38 molecule ISO RGD PMID:12111041 RGD:2307243 NCBI chrNW_004624755:16,035,412...16,093,610
Ensembl chrNW_004624755:16,034,771...16,093,866
JBrowse link
G Cdkn1b cyclin dependent kinase inhibitor 1B ISO RGD PMID:15799773 RGD:2293627 NCBI chrNW_004624752:25,202,474...25,207,107
Ensembl chrNW_004624752:25,203,474...25,207,114
JBrowse link
G Cflar CASP8 and FADD like apoptosis regulator ISO RGD PMID:23926673 RGD:11341700 NCBI chrNW_004624889:76,760...108,619
Ensembl chrNW_004624889:75,396...100,989
JBrowse link
G Chat choline O-acetyltransferase ISO RGD PMID:17218023 RGD:1600836 NCBI chrNW_004624928:357,812...401,668
Ensembl chrNW_004624928:360,704...399,714
JBrowse link
G Chrna4 cholinergic receptor nicotinic alpha 4 subunit involved_in ISO (PMID:12189247) UniProt PMID:12189247 NCBI chrNW_004624741:29,024,668...29,039,684
Ensembl chrNW_004624741:29,026,908...29,044,464
JBrowse link
G Chrna7 cholinergic receptor nicotinic alpha 7 subunit involved_in ISO (PMID:12189247) UniProt PMID:12189247 NCBI chrNW_004624768:908,907...1,024,953
Ensembl chrNW_004624768:909,099...1,024,902
JBrowse link
G Chrnb2 cholinergic receptor nicotinic beta 2 subunit involved_in
acts_upstream_of_or_within
ISO (PMID:12189247)
(PMID:15450117)
UniProt
MGI
PMID:12189247 PMID:15450117 NCBI chrNW_004624885:2,839,607...2,851,934
Ensembl chrNW_004624885:2,843,899...2,848,522
JBrowse link
G Ciao3 cytosolic iron-sulfur assembly component 3 involved_in ISO (PMID:16956324) HGNC-UCL PMID:16956324 NCBI chrNW_004624913:1,538,561...1,553,409
Ensembl chrNW_004624913:1,538,546...1,553,415
JBrowse link
G Cited2 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2 involved_in ISO (PMID:9887100)
(PMID:17906695)
UniProt
BHF-UCL
PMID:9887100 PMID:17906695 NCBI chrNW_004624753:14,630,842...14,633,245
Ensembl chrNW_004624753:14,630,827...14,632,536
JBrowse link
G Cldn3 claudin 3 involved_in ISO (PMID:15174142) UniProt PMID:15174142 NCBI chrNW_004624740:14,065,172...14,066,432
Ensembl chrNW_004624740:14,065,478...14,066,137
JBrowse link
G Comt catechol-O-methyltransferase acts_upstream_of_or_within ISO (PMID:20075204) MGI PMID:20075204 NCBI chrNW_004624747:569,127...588,479
Ensembl chrNW_004624747:581,832...588,333
JBrowse link
G Cpt1a carnitine palmitoyltransferase 1A ISO RGD PMID:33310031 RGD:329955450 NCBI chrNW_004624767:18,109,011...18,161,378
Ensembl chrNW_004624767:18,109,008...18,161,639
JBrowse link
G Creb1 cAMP responsive element binding protein 1 ISO RGD PMID:24084215 RGD:10059409 NCBI chrNW_004624765:8,374,160...8,436,969 JBrowse link
G Crhr1 corticotropin releasing hormone receptor 1 ISO RGD PMID:16099461 RGD:1626240 NCBI chrNW_004624849:2,484,144...2,528,130
Ensembl chrNW_004624849:2,484,109...2,528,223
JBrowse link
G Crp C-reactive protein ISO RGD PMID:21158023 RGD:5131294 NCBI chrNW_004624794:1,531,555...1,533,804
Ensembl chrNW_004624794:1,531,571...1,533,804
JBrowse link
G Cryaa crystallin alpha A acts_upstream_of_or_within ISO (PMID:18191123) MGI PMID:18191123 NCBI chrNW_004624745:27,636,932...27,639,814
Ensembl chrNW_004624745:27,637,267...27,639,371
JBrowse link
G Cryab crystallin alpha B acts_upstream_of_or_within ISO (PMID:18191123) MGI PMID:18191123 NCBI chrNW_004624784:7,074,590...7,093,471
Ensembl chrNW_004624784:7,074,590...7,093,054
JBrowse link
G Csf1r colony stimulating factor 1 receptor ISO RGD PMID:32522286 PMID:33101590 RGD:151665765 RGD:151665766 NCBI chrNW_004624774:9,363,156...9,391,939
Ensembl chrNW_004624774:9,363,908...9,391,986
JBrowse link
G Cx3cl1 C-X3-C motif chemokine ligand 1 ISO RGD PMID:18630689 RGD:4891889 NCBI chrNW_004624746:28,677,956...28,688,638
Ensembl chrNW_004624746:28,677,709...28,689,122
JBrowse link
G Cxcl12 C-X-C motif chemokine ligand 12 ISO RGD PMID:17581219 RGD:2306578 NCBI chrNW_004624922:1,261,228...1,273,755
Ensembl chrNW_004624922:1,261,228...1,273,758
JBrowse link
G Cxcr4 C-X-C motif chemokine receptor 4 involved_in ISO (PMID:15174142) UniProt PMID:15174142 NCBI chrNW_004624732:35,473,740...35,477,482
Ensembl chrNW_004624732:35,472,760...35,477,528
JBrowse link
G Cygb cytoglobin ISO RGD PMID:14660570 RGD:9685175 NCBI chrNW_004624801:6,385,771...6,395,705
Ensembl chrNW_004624801:6,384,213...6,395,979
JBrowse link
G Ddit4 DNA damage inducible transcript 4 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:18198340) RGD
MGI
TreeGrafter
PMID:11884613 PMID:18198340 GO_REF:0000118 RGD:633979 NCBI chrNW_004624754:6,091,914...6,094,035
Ensembl chrNW_004624754:6,091,809...6,094,525
JBrowse link
G Dio3 iodothyronine deiodinase 3 ISO RGD PMID:18259611 RGD:2303417 NCBI chrNW_004624734:2,611,864...2,613,932 JBrowse link
G Dnmt3b DNA methyltransferase 3 beta ISO RGD PMID:23529784 RGD:9588317 NCBI chrNW_004624842:6,450,972...6,505,929
Ensembl chrNW_004624842:6,450,852...6,475,785
JBrowse link
G Dpp4 dipeptidyl peptidase 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624732:3,460,529...3,535,252
Ensembl chrNW_004624732:3,460,118...3,535,249
JBrowse link
G Drd2 dopamine receptor D2 ISO RGD PMID:15681393 RGD:1581407 NCBI chrNW_004624784:8,828,589...8,906,617
Ensembl chrNW_004624784:8,827,006...8,865,529
JBrowse link
G Dspp dentin sialophosphoprotein ISO RGD PMID:24661255 RGD:12911017 NCBI chrNW_004624872:4,096,001...4,102,392 JBrowse link
G Ece1 endothelin converting enzyme 1 ISO RGD PMID:11813889 RGD:728806 NCBI chrNW_004624764:6,222,301...6,318,423
Ensembl chrNW_004624764:6,221,867...6,318,477
JBrowse link
G Edn1 endothelin 1 acts_upstream_of_or_within ISO (PMID:8764295) RGD
MGI
PMID:8764295 PMID:12060564 MGI:892631 RGD:625753 NCBI chrNW_004624756:13,842,482...13,849,003
Ensembl chrNW_004624756:13,842,164...13,849,029
JBrowse link
G Ednra endothelin receptor type A acts_upstream_of_or_within ISO (PMID:9449664) MGI PMID:9449664 NCBI chrNW_004624853:6,298,406...6,362,353
Ensembl chrNW_004624853:6,302,751...6,360,089
JBrowse link
G Egln1 egl-9 family hypoxia inducible factor 1 involved_in ISO (PMID:16956324) RGD
HGNC-UCL
PMID:12876291 PMID:16956324 RGD:727754 NCBI chrNW_004624775:18,325,135...18,369,504 JBrowse link
G Egln2 egl-9 family hypoxia inducible factor 2 involved_in ISO (PMID:11595184) UniProt PMID:11595184 NCBI chrNW_004624925:708,920...716,084
Ensembl chrNW_004624925:707,583...716,456
JBrowse link
G Egln3 egl-9 family hypoxia inducible factor 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624838:2,819,719...2,848,094
Ensembl chrNW_004624838:2,819,631...2,847,827
JBrowse link
G Egr1 early growth response 1 involved_in ISO (MGI:1928025|PMID:11100120) UniProt PMID:11100120 MGI:1928025 NCBI chrNW_004624743:31,247,855...31,251,675
Ensembl chrNW_004624743:31,247,516...31,252,205
JBrowse link
G Eng endoglin involved_in ISO (PMID:18156205) BHF-UCL PMID:18156205 NCBI chrNW_004624760:7,703,979...7,735,636
Ensembl chrNW_004624760:7,703,820...7,734,457
JBrowse link
G Epas1 endothelial PAS domain protein 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:11782478)
(PMID:15626745)
(PMID:25414188)
MGI
UniProt
Ensembl
RGD
PMID:11782478 PMID:12675925 PMID:15626745 PMID:25414188 GO_REF:0000107 GO_REF:0000117 RGD:632652 NCBI chrNW_004624738:27,747,770...27,831,213
Ensembl chrNW_004624738:27,747,696...27,834,054
JBrowse link
G Epor erythropoietin receptor ISO RGD PMID:21624288 RGD:11041655 NCBI chrNW_004624828:3,181,772...3,187,242
Ensembl chrNW_004624828:3,181,957...3,187,231
JBrowse link
G Ercc2 ERCC excision repair 2, TFIIH core complex helicase subunit ISO RGD PMID:9763211 RGD:2302855 NCBI chrNW_004624907:2,249,323...2,263,999
Ensembl chrNW_004624907:2,250,133...2,263,947
JBrowse link
G Ercc3 ERCC excision repair 3, TFIIH core complex helicase subunit ISO RGD PMID:9763211 RGD:2302855 NCBI chrNW_004624732:13,730,648...13,776,886
Ensembl chrNW_004624732:13,729,947...13,776,870
JBrowse link
G Ets1 ETS proto-oncogene 1, transcription factor ISO RGD PMID:15579511 RGD:2313701 NCBI chrNW_004624812:2,795,961...2,920,263
Ensembl chrNW_004624812:2,795,686...2,920,274
JBrowse link
G F7 coagulation factor VII ISO RGD PMID:9155722 RGD:11041574 NCBI chrNW_004624793:780,057...788,105
Ensembl chrNW_004624793:780,059...788,095
JBrowse link
G Fas Fas cell surface death receptor ISO RGD PMID:16870148 RGD:1600332 NCBI chrNW_004624791:15,290,022...15,315,848
Ensembl chrNW_004624791:15,289,348...15,315,848
JBrowse link
G Flt1 fms related receptor tyrosine kinase 1 acts_upstream_of_or_within ISO (PMID:18772315) RGD
MGI
PMID:12062723 PMID:18772315 PMID:20026766 RGD:10402123 RGD:1582498 NCBI chrNW_004624776:10,043,113...10,218,598
Ensembl chrNW_004624776:10,043,258...10,219,104
JBrowse link
G Fosl2 FOS like 2, AP-1 transcription factor subunit acts_upstream_of_or_within ISO (PMID:18548006) RGD
MGI
PMID:15892448 PMID:18548006 RGD:2293775 NCBI chrNW_004624738:10,370,479...10,391,623
Ensembl chrNW_004624738:10,370,103...10,391,623
JBrowse link
G Fundc1 FUN14 domain containing 1 involved_in
acts_upstream_of_or_within
ISO (PMID:22267086) UniProt
MGI
PMID:22267086 NCBI chrNW_004624887:626,321...641,296
Ensembl chrNW_004624887:626,321...641,293
JBrowse link
G Fzd4 frizzled class receptor 4 acts_upstream_of_or_within ISO (PMID:25414188) MGI PMID:25414188 NCBI chrNW_004624845:2,972,308...3,055,596
Ensembl chrNW_004624845:3,046,063...3,050,560
JBrowse link
G Ghrh growth hormone releasing hormone ISO RGD PMID:21180161 RGD:5687743 NCBI chrNW_004625146:5,484...8,763
Ensembl chrNW_004625146:6,381...13,318
JBrowse link
G Gpr182 G protein-coupled receptor 182 ISO RGD PMID:12622928 RGD:1625768 NCBI chrNW_004624802:10,936,114...10,939,614
Ensembl chrNW_004624802:10,936,619...10,939,603
JBrowse link
G Grin1 glutamate ionotropic receptor NMDA type subunit 1 ISO RGD PMID:18927268 RGD:401950493 NCBI chrNW_004624760:777,208...800,525
Ensembl chrNW_004624760:776,873...801,354
JBrowse link
G Grin2b glutamate ionotropic receptor NMDA type subunit 2B ISO RGD PMID:17270176 RGD:13432036 NCBI chrNW_004624752:24,008,520...24,480,834
Ensembl chrNW_004624752:24,135,487...24,459,288
JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:10074486), (PMID:11792862)
(PMID:17437992)
(PMID:19273585)
(PMID:9606183)
(PMID:11801735), (PMID:8702901)
(PMID:11782478)
MGI
UniProt
RGD
PMID:8702901 PMID:9606183 PMID:10074486 PMID:11782478 PMID:11792862 More... GO_REF:0000117 RGD:628389 RGD:632652 NCBI chrNW_004624734:39,414,458...39,471,705
Ensembl chrNW_004624734:39,411,824...39,471,705
JBrowse link
G Hif3a hypoxia inducible factor 3 subunit alpha acts_upstream_of_or_within ISO (PMID:9840812) MGI PMID:9840812 NCBI chrNW_004624832:7,128,285...7,157,506
Ensembl chrNW_004624832:7,128,285...7,157,494
JBrowse link
G Hk1 hexokinase 1 ISO RGD PMID:29676955 RGD:13703029 NCBI chrNW_004624754:3,594,478...3,656,231
Ensembl chrNW_004624754:3,591,090...3,659,760
JBrowse link
G Hk2 hexokinase 2 ISO RGD PMID:29676955 RGD:13703029 NCBI chrNW_004624749:28,618,146...28,718,852
Ensembl chrNW_004624749:28,618,030...28,689,794
JBrowse link
G Hmbs hydroxymethylbilane synthase ISO RGD PMID:3697363 RGD:4144802 NCBI chrNW_004624784:14,467,515...14,474,954
Ensembl chrNW_004624784:14,467,533...14,474,954
JBrowse link
G Hmox1 heme oxygenase 1 ISO RGD PMID:12114196 PMID:14970910 RGD:1582715 RGD:625603 NCBI chrNW_004624750:341,699...346,005
Ensembl chrNW_004624750:342,146...345,887
JBrowse link
G Hmox2 heme oxygenase 2 involved_in ISO (PMID:15528406) UniProt PMID:15528406 NCBI chrNW_004624824:2,272,515...2,317,115 JBrowse link
G Hsd11b2 hydroxysteroid 11-beta dehydrogenase 2 ISO RGD PMID:19470702 RGD:2308928 NCBI chrNW_004624746:18,883,587...18,889,205
Ensembl chrNW_004624746:18,883,353...18,889,402
JBrowse link
G Hsp90b1 heat shock protein 90 beta family member 1 involved_in ISO (PMID:15620698) UniProt PMID:15620698 NCBI chrNW_004624750:4,738,563...4,752,227
Ensembl chrNW_004624750:4,737,894...4,752,221
JBrowse link
G Hspd1 heat shock protein family D (Hsp60) member 1 ISO RGD PMID:17439344 RGD:1624228 NCBI chrNW_004624889:2,736,727...2,746,333 JBrowse link
G Hspg2 heparan sulfate proteoglycan 2 ISO RGD PMID:17437047 RGD:1624260 NCBI chrNW_004624764:6,639,152...6,736,161
Ensembl chrNW_004624764:6,640,087...6,708,130
JBrowse link
G Hyou1 hypoxia up-regulated 1 ISO RGD PMID:8617779 RGD:633350 NCBI chrNW_004624784:14,427,297...14,439,027
Ensembl chrNW_004624784:14,427,130...14,439,038
JBrowse link
G Icam1 intercellular adhesion molecule 1 ISO RGD PMID:19823174 RGD:4145499 NCBI chrNW_004624828:2,432,584...2,451,997
Ensembl chrNW_004624828:2,432,550...2,453,071
JBrowse link
G Igf1 insulin like growth factor 1 ISO RGD PMID:19766709 RGD:10046049 NCBI chrNW_004624750:5,881,065...5,954,799
Ensembl chrNW_004624750:5,881,091...5,952,300
JBrowse link
G Igfbp3 insulin like growth factor binding protein 3 ISO RGD PMID:22805023 RGD:12743618 NCBI chrNW_004624740:6,878,818...6,886,512
Ensembl chrNW_004624740:6,877,348...6,886,512
JBrowse link
G Il18 interleukin 18 ISO RGD PMID:12122053 RGD:628353 NCBI chrNW_004624784:7,294,286...7,312,959
Ensembl chrNW_004624784:7,294,183...7,304,687
JBrowse link
G Il1a interleukin 1 alpha ISO RGD PMID:15197744 RGD:4143218 NCBI chrNW_004624749:12,795,967...12,805,658
Ensembl chrNW_004624749:12,795,946...12,805,154
JBrowse link
G Il1b interleukin 1 beta ISO RGD PMID:19342292 RGD:4142845 NCBI chrNW_004624749:12,852,128...12,858,478
Ensembl chrNW_004624749:12,852,021...12,858,760
JBrowse link
G Insr insulin receptor ISO chronic intermittent hypoxia RGD PMID:25352008 RGD:14700927 NCBI chrNW_004624828:345,135...485,856
Ensembl chrNW_004624828:345,135...486,184
JBrowse link
G Itga2 integrin subunit alpha 2 ISO RGD PMID:16284587 RGD:1582307 NCBI chrNW_004624759:6,281,698...6,376,702
Ensembl chrNW_004624759:6,281,561...6,376,712
JBrowse link
G Itpr1 inositol 1,4,5-trisphosphate receptor type 1 involved_in ISO (MGI:3836482|PMID:19120137)
(PMID:19120137)
BHF-UCL PMID:19120137 MGI:3836482 NCBI chrNW_004624773:14,856,803...15,193,173
Ensembl chrNW_004624773:14,856,804...15,193,168
JBrowse link
G Itpr2 inositol 1,4,5-trisphosphate receptor type 2 involved_in ISO (PMID:19120137) BHF-UCL PMID:19120137 NCBI chrNW_004624752:12,360,796...12,820,042
Ensembl chrNW_004624752:12,360,740...12,822,287
JBrowse link
G Jag2 jagged canonical Notch ligand 2 ISO RGD PMID:18344904 RGD:2302246 NCBI chrNW_004624734:308,371...327,496
Ensembl chrNW_004624734:308,375...327,604
JBrowse link
G Kcna5 potassium voltage-gated channel subfamily A member 5 ISO RGD PMID:15151918 RGD:1627657 NCBI chrNW_004624860:2,042,325...2,045,953
Ensembl chrNW_004624860:2,039,771...2,045,867
JBrowse link
G Kcnj11 potassium inwardly rectifying channel subfamily J member 11 acts_upstream_of_or_within ISO (PMID:17445233) MGI PMID:17445233 NCBI chrNW_004624766:9,012,166...9,015,269
Ensembl chrNW_004624766:9,013,225...9,014,397
JBrowse link
G Kcnj8 potassium inwardly rectifying channel subfamily J member 8 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:28893911), (PMID:29666184) MGI
Ensembl
PMID:28893911 PMID:29666184 GO_REF:0000107 NCBI chrNW_004624752:16,939,289...16,945,692
Ensembl chrNW_004624752:16,939,384...16,946,723
JBrowse link
G Kcnma1 potassium calcium-activated channel subfamily M alpha 1 acts_upstream_of_or_within
involved_in
ISO (PMID:16306267)
(PMID:15528406)
MGI
UniProt
RGD
PMID:15528406 PMID:16306267 RGD:1581584 NCBI chrNW_004624754:10,152,635...10,885,239
Ensembl chrNW_004624754:10,153,809...10,885,079
JBrowse link
G Kcnn4 potassium calcium-activated channel subfamily N member 4 ISO RGD PMID:28679649 RGD:329955564 NCBI chrNW_004624907:1,266,348...1,279,258
Ensembl chrNW_004624907:1,266,348...1,278,699
JBrowse link
G Kdm3a lysine demethylase 3A ISO RGD PMID:18538129 RGD:9586363 NCBI chrNW_004624749:16,784,538...16,829,784
Ensembl chrNW_004624749:16,784,538...16,829,365
JBrowse link
G Kdm6a lysine demethylase 6A ISO RGD PMID:33075501 RGD:151665134 NCBI chrNW_004624887:1,065,173...1,279,660
Ensembl chrNW_004624887:1,065,883...1,279,186
JBrowse link
G Kdr kinase insert domain receptor ISO RGD PMID:15780476 RGD:2292011 NCBI chrNW_004624761:14,330,224...14,380,680
Ensembl chrNW_004624761:14,330,489...14,379,051
JBrowse link
G Lct lactase ISO RGD PMID:12773704 RGD:1600260 NCBI chrNW_004624732:35,125,995...35,177,055
Ensembl chrNW_004624732:35,125,287...35,175,062
JBrowse link
G Ldlr low density lipoprotein receptor ISO RGD PMID:18703410 RGD:5490256 NCBI chrNW_004624828:2,999,122...3,021,893
Ensembl chrNW_004624828:2,999,169...3,021,987
JBrowse link
G Lep leptin ISO RGD PMID:15284063 RGD:5129123 NCBI chrNW_004624783:7,708,820...7,721,610
Ensembl chrNW_004624783:7,708,588...7,721,727
JBrowse link
G Lepr leptin receptor ISO RGD PMID:15284063 RGD:5129123 NCBI chrNW_004624742:29,221,742...29,313,273
Ensembl chrNW_004624742:29,223,392...29,337,049
JBrowse link
G Lif LIF interleukin 6 family cytokine acts_upstream_of_or_within ISO (PMID:18548006) MGI PMID:18548006 NCBI chrNW_004624747:6,558,872...6,565,207
Ensembl chrNW_004624747:6,558,817...6,565,281
JBrowse link
G Limd1 LIM domain containing 1 involved_in ISO (PMID:22286099) UniProt PMID:22286099 NCBI chrNW_004624730:75,176,978...75,218,606
Ensembl chrNW_004624730:75,176,717...75,219,314
JBrowse link
G Lipc lipase C, hepatic type ISO RGD PMID:15271879 RGD:2307444 NCBI chrNW_004624781:13,342,469...13,468,120
Ensembl chrNW_004624781:13,342,357...13,455,055
JBrowse link
G LOC101707509 cytochrome P450 1A1 ISO RGD PMID:11589108 RGD:2306678 NCBI chrNW_004627988:7...1,323 JBrowse link
G LOC101717043 cytochrome b-245 light chain ISO RGD PMID:22372715 RGD:11040694 NCBI chrNW_004624746:911,852...919,361
Ensembl chrNW_004624746:911,842...919,362
JBrowse link
G LOC101719398 serotransferrin ISO RGD PMID:16479386 RGD:1601542 NCBI chrNW_004624730:10,078,165...10,109,349 JBrowse link
G LOC101720625 heat shock factor protein 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624746:19,141,861...19,151,392
Ensembl chrNW_004624746:19,146,210...19,151,061
JBrowse link
G Lonp1 lon peptidase 1, mitochondrial involved_in ISO (PMID:17418790) RGD
UniProt
PMID:12082077 PMID:17418790 RGD:633879 NCBI chrNW_004624828:4,494,786...4,516,772
Ensembl chrNW_004624828:4,494,813...4,516,510
JBrowse link
G Loxl2 lysyl oxidase like 2 involved_in ISO (MGI:5320262|PMID:21835952) UniProt PMID:21835952 MGI:5320262 NCBI chrNW_004624758:18,567,367...18,644,528
Ensembl chrNW_004624758:18,568,607...18,621,785
JBrowse link
G Lta lymphotoxin alpha ISO RGD PMID:15197744 RGD:4143218 NCBI chrNW_004624754:24,626,930...24,628,412
Ensembl chrNW_004624754:24,627,318...24,628,182
JBrowse link
G Map3k7 mitogen-activated protein kinase kinase kinase 7 ISO RGD PMID:22388934 RGD:155791648 NCBI chrNW_004624799:3,554,644...3,623,317
Ensembl chrNW_004624799:3,554,678...3,622,289
JBrowse link
G Mb myoglobin acts_upstream_of_or_within ISO (PMID:14656764) MGI PMID:14656764 NCBI chrNW_004624750:259,559...266,124
Ensembl chrNW_004624750:259,041...266,238
JBrowse link
G Mecp2 methyl-CpG binding protein 2 acts_upstream_of_or_within ISO (PMID:17997046) MGI PMID:17997046 NCBI chrNW_004624946:620,581...685,339
Ensembl chrNW_004624946:628,284...685,246
JBrowse link
G Mlh1 mutL homolog 1 ISO RGD PMID:15942958 RGD:1598733 NCBI chrNW_004624788:15,110,436...15,160,462
Ensembl chrNW_004624788:15,110,658...15,160,535
JBrowse link
G Mmp12 matrix metallopeptidase 12 ISO RGD PMID:27807143 RGD:12910498 NCBI chrNW_004624878:6,017...17,368
Ensembl chrNW_004624878:6,035...17,445
JBrowse link
G Mmp13 matrix metallopeptidase 13 ISO RGD PMID:16965566 RGD:1582552 NCBI chrNW_004624918:2,228,688...2,239,852 JBrowse link
G Mmp14 matrix metallopeptidase 14 ISO RGD PMID:16980344 RGD:1582594 NCBI chrNW_004624820:9,667,371...9,677,488
Ensembl chrNW_004624820:9,667,262...9,677,774
JBrowse link
G Mmp2 matrix metallopeptidase 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:17382917) RGD
MGI
TreeGrafter
PMID:16980344 PMID:17382917 GO_REF:0000118 RGD:1582594 NCBI chrNW_004624757:1,450,680...1,479,160
Ensembl chrNW_004624757:1,448,698...1,479,255
JBrowse link
G Mmp3 matrix metallopeptidase 3 ISO RGD PMID:15099024 RGD:2325962 NCBI chrNW_004624878:39,282...47,386
Ensembl chrNW_004624878:39,358...47,075
JBrowse link
G Mmp9 matrix metallopeptidase 9 ISO RGD PMID:17289933 RGD:1642045 NCBI chrNW_004624790:8,584,399...8,591,763
Ensembl chrNW_004624790:8,583,457...8,591,713
JBrowse link
G Mthfr methylenetetrahydrofolate reductase ISO RGD PMID:15845641 RGD:1359026 NCBI chrNW_004624818:1,184,736...1,202,708
Ensembl chrNW_004624818:1,187,869...1,199,168
JBrowse link
G Muc1 mucin 1, cell surface associated ISO RGD PMID:19549898 RGD:2317979 NCBI chrNW_004624885:2,339,281...2,343,351 JBrowse link
G Myb MYB proto-oncogene, transcription factor ISO RGD PMID:10074303 RGD:11532745 NCBI chrNW_004624886:2,455,704...2,489,593 JBrowse link
G Myocd myocardin involved_in ISO (PMID:19098903) BHF-UCL PMID:19098903 NCBI chrNW_004624877:618,789...647,471 JBrowse link
G Ndp norrin cystine knot growth factor NDP involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:25414188) Ensembl
MGI
PMID:25414188 GO_REF:0000107 NCBI chrNW_004624762:11,409,837...11,435,709
Ensembl chrNW_004624762:11,409,727...11,435,811
JBrowse link
G Nf1 neurofibromin 1 acts_upstream_of_or_within ISO (PMID:16288202) MGI PMID:16288202 NCBI chrNW_004624875:3,636,762...3,959,991
Ensembl chrNW_004624875:3,636,924...3,956,576
JBrowse link
G Nfatc3 nuclear factor of activated T cells 3 acts_upstream_of_or_within ISO (PMID:17403661) MGI PMID:17403661 NCBI chrNW_004624746:18,083,051...18,210,399
Ensembl chrNW_004624746:18,085,518...18,210,401
JBrowse link
G Ngb neuroglobin involved_in ISO
IEA
RGD
TreeGrafter
PMID:16750520 GO_REF:0000118 RGD:9743951 NCBI chrNW_004624734:24,640,389...24,645,041
Ensembl chrNW_004624734:24,640,181...24,647,243
JBrowse link
G Nos1 nitric oxide synthase 1 involved_in ISO PMID:16276418
(PMID:16276418)
RGD
BHF-UCL
PMID:16276418 PMID:17442632 RGD:1642143 RGD:8553323 NCBI chrNW_004624747:15,940,614...16,118,051
Ensembl chrNW_004624747:16,003,969...16,113,165
JBrowse link
G Nos2 nitric oxide synthase 2 acts_upstream_of_or_within ISO (PMID:12960352) MGI PMID:12960352 NCBI chrNW_004624786:491,944...530,427
Ensembl chrNW_004624786:489,311...528,271
JBrowse link
G Nos3 nitric oxide synthase 3 ISO RGD PMID:17947499 RGD:2292122 NCBI chrNW_004624800:5,600,215...5,619,020
Ensembl chrNW_004624800:5,600,212...5,619,004
JBrowse link
G Nox4 NADPH oxidase 4 ISO RGD PMID:20185631 RGD:2324656 NCBI chrNW_004624845:669,880...829,471
Ensembl chrNW_004624845:669,902...827,834
JBrowse link
G Nppa natriuretic peptide A ISO RGD PMID:2136863 RGD:7247720 NCBI chrNW_004624818:1,147,654...1,149,722
Ensembl chrNW_004624818:1,147,974...1,148,927
JBrowse link
G Nppb natriuretic peptide B ISO RGD PMID:17822384 RGD:1642261 NCBI chrNW_004624818:1,139,776...1,141,010 JBrowse link
G Nppc natriuretic peptide C ISO RGD PMID:16677483 RGD:1642268 NCBI chrNW_004624843:4,869,278...4,873,444
Ensembl chrNW_004624843:4,869,614...4,873,448
JBrowse link
G Nr4a2 nuclear receptor subfamily 4 group A member 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:14742729) Ensembl
MGI
PMID:14742729 GO_REF:0000107 NCBI chrNW_004624732:9,572,160...9,589,624
Ensembl chrNW_004624732:9,581,779...9,589,942
JBrowse link
G Nrf1 nuclear respiratory factor 1 ISO RGD PMID:18078825 PMID:33310031 RGD:2302401 RGD:329955450 NCBI chrNW_004624783:6,488,653...6,654,304
Ensembl chrNW_004624783:6,488,380...6,602,250
JBrowse link
G P2rx2 purinergic receptor P2X 2 acts_upstream_of_or_within ISO (PMID:14672995) MGI PMID:14672995 NCBI chrNW_004624747:28,019,305...28,023,558
Ensembl chrNW_004624747:28,020,652...28,023,392
JBrowse link
G P2rx3 purinergic receptor P2X 3 acts_upstream_of_or_within ISO (PMID:14672995) MGI PMID:14672995 NCBI chrNW_004624864:3,233,019...3,253,525
Ensembl chrNW_004624864:3,229,979...3,253,094
JBrowse link
G Pak1 p21 (RAC1) activated kinase 1 ISO RGD PMID:9367856 RGD:2299857 NCBI chrNW_004624863:442,465...609,159
Ensembl chrNW_004624863:439,541...525,918
JBrowse link
G Pam peptidylglycine alpha-amidating monooxygenase ISO RGD PMID:18818385 RGD:6483514 NCBI chrNW_004624743:20,834,664...21,178,933
Ensembl chrNW_004624743:20,988,916...21,178,933
JBrowse link
G Pde5a phosphodiesterase 5A ISO RGD PMID:12466227 RGD:1582528 NCBI chrNW_004624964:11,085...126,027
Ensembl chrNW_004624964:14,216...126,553
JBrowse link
G Pdgfa platelet derived growth factor subunit A ISO RGD PMID:8447423 RGD:1580847 NCBI chrNW_004624740:26,172,808...26,191,557
Ensembl chrNW_004624740:26,169,064...26,188,866
JBrowse link
G Pdgfb platelet derived growth factor subunit B ISO RGD PMID:8447423 RGD:1580847 NCBI chrNW_004624752:9,072,471...9,088,289
Ensembl chrNW_004624752:9,072,512...9,088,593
JBrowse link
G Pdia3 protein disulfide isomerase family A member 3 ISO RGD PMID:23315792 RGD:9999167 NCBI chrNW_004624804:10,754,978...10,784,641
Ensembl chrNW_004624804:10,755,103...10,784,337
JBrowse link
G Pdlim1 PDZ and LIM domain 1 ISO RGD PMID:8522188 RGD:68225 NCBI chrNW_004624737:6,485,607...6,530,511
Ensembl chrNW_004624737:6,485,607...6,530,526
JBrowse link
G Penk proenkephalin ISO RGD PMID:22200548 RGD:10003120 NCBI chrNW_004624886:3,595,485...3,613,117
Ensembl chrNW_004624886:3,595,450...3,613,593
JBrowse link
G Pgf placental growth factor involved_in IEA
ISO
TreeGrafter
RGD
PMID:17240241 GO_REF:0000118 RGD:1642388 NCBI chrNW_004624734:26,751,986...26,764,154
Ensembl chrNW_004624734:26,751,530...26,764,242
JBrowse link
G Pin1 peptidylprolyl cis/trans isomerase, NIMA-interacting 1 involved_in ISO (PMID:25576397) UniProt PMID:25576397 NCBI chrNW_004624828:2,121,262...2,131,645
Ensembl chrNW_004624828:2,121,329...2,131,645
JBrowse link
G Pklr pyruvate kinase L/R ISO RGD PMID:11356723 RGD:68728 NCBI chrNW_004624885:2,261,850...2,272,175
Ensembl chrNW_004624885:2,264,928...2,272,171
JBrowse link
G Pkm pyruvate kinase M1/2 ISO RGD PMID:3696161 RGD:2303142 NCBI chrNW_004624781:1,796,909...1,823,787
Ensembl chrNW_004624781:1,796,801...1,824,144
JBrowse link
G Plat plasminogen activator, tissue type acts_upstream_of_or_within ISO (PMID:17382917) MGI PMID:17382917 NCBI chrNW_004624780:1,014,429...1,063,636
Ensembl chrNW_004624780:1,028,085...1,063,649
JBrowse link
G Plau plasminogen activator, urokinase acts_upstream_of_or_within ISO (PMID:17382917) MGI PMID:17382917 NCBI chrNW_004624754:7,405,637...7,415,870
Ensembl chrNW_004624754:7,408,983...7,416,559
JBrowse link
G Pld2 phospholipase D2 ISO RGD PMID:11095536 RGD:2299918 NCBI chrNW_004624786:8,690,968...8,702,213
Ensembl chrNW_004624786:8,690,461...8,702,771
JBrowse link
G Plekhn1 pleckstrin homology domain containing N1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624818:8,537,044...8,545,393
Ensembl chrNW_004624818:8,537,631...8,544,676
JBrowse link
G Plod1 procollagen-lysine,2-oxoglutarate 5-dioxygenase 1 involved_in ISO (PMID:15174142) RGD
UniProt
PMID:14622280 PMID:15174142 RGD:1303932 NCBI chrNW_004624818:1,070,841...1,092,346
Ensembl chrNW_004624818:1,071,505...1,092,237
JBrowse link
G Plod2 procollagen-lysine,2-oxoglutarate 5-dioxygenase 2 involved_in ISO (PMID:15174142) RGD
UniProt
PMID:14622280 PMID:15174142 RGD:1303932 NCBI chrNW_004624730:22,944,710...23,034,200
Ensembl chrNW_004624730:22,944,184...23,034,231
JBrowse link
G Pml PML nuclear body scaffold involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16915281) Ensembl
MGI
PMID:16915281 GO_REF:0000107 NCBI chrNW_004624781:464,858...498,146
Ensembl chrNW_004624781:464,658...497,775
JBrowse link
G Pnmt phenylethanolamine N-methyltransferase ISO RGD PMID:21046459 RGD:5129698 NCBI chrNW_004624795:3,408,559...3,410,669
Ensembl chrNW_004624795:3,408,627...3,410,304
JBrowse link
G Postn periostin ISO RGD PMID:15121739 RGD:10041030 NCBI chrNW_004624920:542,479...575,760
Ensembl chrNW_004624920:540,750...575,855
JBrowse link
G Ppara peroxisome proliferator activated receptor alpha involved_in ISO PMID:15292030 HGNC-UCL
RGD
PMID:15292030 PMID:33310031 RGD:2315862 RGD:329955450 NCBI chrNW_004624752:3,646,499...3,702,553
Ensembl chrNW_004624752:3,650,922...3,701,672
JBrowse link
G Ppargc1a PPARG coactivator 1 alpha ISO RGD PMID:20875806 PMID:33310031 RGD:329955450 RGD:6484529 NCBI chrNW_004624755:7,826,219...8,460,746
Ensembl chrNW_004624755:8,375,596...8,465,297
JBrowse link
G Ppia peptidylprolyl isomerase A involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624740:7,447,554...7,450,707
Ensembl chrNW_004624740:7,447,554...7,450,641
JBrowse link
G Prkcd protein kinase C delta ISO RGD PMID:16936002 RGD:1642548 NCBI chrNW_004624822:4,035,819...4,062,907
Ensembl chrNW_004624822:4,033,130...4,059,555
JBrowse link
G Prkcq protein kinase C theta ISO RGD PMID:15994856 RGD:1625608 NCBI chrNW_004624775:1,419,596...1,543,805
Ensembl chrNW_004624775:1,419,509...1,502,064
JBrowse link
G Prmt2 protein arginine methyltransferase 2 involved_in ISO (MGI:3762283|PMID:16690984) BHF-UCL PMID:16690984 MGI:3762283 NCBI chrNW_004624745:31,680,149...31,701,322
Ensembl chrNW_004624745:31,689,868...31,709,018
JBrowse link
G Psen2 presenilin 2 ISO RGD PMID:12468103 RGD:1304261 NCBI chrNW_004624771:17,183,538...17,205,460
Ensembl chrNW_004624771:17,183,447...17,224,188
JBrowse link
G Ptgis prostaglandin I2 synthase ISO RGD PMID:12062720 PMID:16094316 RGD:401959327 RGD:8693629 NCBI chrNW_004624790:5,850,647...5,885,754
Ensembl chrNW_004624790:5,850,810...5,886,014
JBrowse link
G Ptk2b protein tyrosine kinase 2 beta ISO RGD PMID:11781137 RGD:1642636 NCBI chrNW_004624758:22,065,448...22,182,604
Ensembl chrNW_004624758:22,124,836...22,182,605
JBrowse link
G Pygm glycogen phosphorylase, muscle associated ISO RGD PMID:14674711 RGD:1599986 NCBI chrNW_004624767:21,626,740...21,639,963
Ensembl chrNW_004624767:21,626,740...21,640,161
JBrowse link
G Rad21 RAD21 cohesin complex component ISO RGD PMID:33741460 RGD:243065262 NCBI chrNW_004624763:15,131,106...15,157,512
Ensembl chrNW_004624763:15,131,005...15,158,155
JBrowse link
G Raf1 Raf-1 proto-oncogene, serine/threonine kinase ISO RGD PMID:8603510 RGD:1580670 NCBI chrNW_004624872:204,357...284,487
Ensembl chrNW_004624872:204,357...269,135
JBrowse link
G Ramp2 receptor activity modifying protein 2 ISO RGD PMID:17251392 RGD:1625295 NCBI chrNW_004624795:1,435,121...1,436,421 JBrowse link
G Reg1a regenerating family member 1 alpha ISO intermittent hypoxia RGD PMID:24055447 RGD:9850134 NCBI chrNW_004624749:23,993,755...23,995,923 JBrowse link
G Rest RE1 silencing transcription factor involved_in ISO (PMID:27531581) UniProt PMID:27531581 NCBI chrNW_004624761:12,464,243...12,495,294 JBrowse link
G Rhoa ras homolog family member A ISO RGD PMID:16205723 RGD:1642821 NCBI chrNW_004624730:3,316,122...3,361,820 JBrowse link
G Ryr1 ryanodine receptor 1 involved_in ISO (PMID:19120137) BHF-UCL
RGD
PMID:19120137 PMID:24692174 RGD:329813077 NCBI chrNW_004624794:11,888,211...12,004,457
Ensembl chrNW_004624794:11,888,289...12,004,314
JBrowse link
G Ryr2 ryanodine receptor 2 involved_in ISO (MGI:3836482|PMID:19120137) BHF-UCL
RGD
PMID:19120137 PMID:22962011 MGI:3836482 RGD:329813078 NCBI chrNW_004624775:12,954,653...13,650,449
Ensembl chrNW_004624775:12,956,042...13,419,381
JBrowse link
G Ryr3 ryanodine receptor 3 ISO RGD PMID:24692174 RGD:329813077 NCBI chrNW_004624804:467,207...1,030,873
Ensembl chrNW_004624804:467,295...1,030,212
JBrowse link
G Scap SREBF chaperone acts_upstream_of_or_within ISO (PMID:17666524) MGI PMID:17666524 NCBI chrNW_004624730:73,926,978...73,975,337
Ensembl chrNW_004624730:73,927,010...73,975,337
JBrowse link
G Scfd1 sec1 family domain containing 1 ISO RGD PMID:9195952 RGD:633771 NCBI chrNW_004624820:1,614,884...1,714,020 JBrowse link
G Scnn1b sodium channel epithelial 1 subunit beta ISO RGD PMID:12372821 RGD:729765 NCBI chrNW_004624782:8,521,639...8,580,099
Ensembl chrNW_004624782:8,549,583...8,581,819
JBrowse link
G Scnn1g sodium channel epithelial 1 subunit gamma ISO RGD PMID:12372821 RGD:729765 NCBI chrNW_004624782:8,424,192...8,452,686
Ensembl chrNW_004624782:8,424,270...8,452,824
JBrowse link
G Sdc2 syndecan 2 ISO RGD PMID:18803305 RGD:2311708 NCBI chrNW_004624763:3,809,850...3,920,364
Ensembl chrNW_004624763:3,809,569...3,919,346
JBrowse link
G Sftpb surfactant protein B ISO RGD PMID:14756961 RGD:4143406 NCBI chrNW_004624749:17,486,483...17,495,822
Ensembl chrNW_004624749:17,486,518...17,493,846
JBrowse link
G Shc1 SHC adaptor protein 1 ISO RGD PMID:16439820 RGD:1643183 NCBI chrNW_004624885:2,511,039...2,520,883
Ensembl chrNW_004624885:2,511,240...2,521,155
JBrowse link
G Shh sonic hedgehog signaling molecule ISO RGD PMID:18228117 RGD:2306299 NCBI chrNW_004624800:2,202,986...2,215,309
Ensembl chrNW_004624800:2,203,393...2,212,068
JBrowse link
G Slc11a2 solute carrier family 11 member 2 involved_in ISO
IEA
RGD
TreeGrafter
PMID:21325818 GO_REF:0000118 RGD:5688411 NCBI chrNW_004624816:1,345,020...1,389,615
Ensembl chrNW_004624816:1,345,006...1,384,299
JBrowse link
G Slc2a1 solute carrier family 2 member 1 ISO RGD PMID:29676955 RGD:13703029 NCBI chrNW_004624892:2,110,310...2,148,023
Ensembl chrNW_004624892:2,117,561...2,148,037
JBrowse link
G Slc2a8 solute carrier family 2 member 8 acts_upstream_of_or_within ISO (PMID:11689004) MGI PMID:11689004 NCBI chrNW_004624760:8,057,892...8,066,804
Ensembl chrNW_004624760:8,054,391...8,066,784
JBrowse link
G Slc6a4 solute carrier family 6 member 4 ISO RGD PMID:11259539 RGD:4889445 NCBI chrNW_004624786:2,673,285...2,711,432
Ensembl chrNW_004624786:2,672,552...2,710,914
JBrowse link
G Slc8a1 solute carrier family 8 member A1 ISO RGD PMID:17267548 RGD:1642729 NCBI chrNW_004624738:21,648,277...22,026,385
Ensembl chrNW_004624738:21,651,489...21,939,927
JBrowse link
G Smad3 SMAD family member 3 involved_in ISO (PMID:12411310) BHF-UCL PMID:12411310 NCBI chrNW_004624781:5,795,652...5,890,047
Ensembl chrNW_004624781:5,795,652...5,890,371
JBrowse link
G Smad4 SMAD family member 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624778:14,570,025...14,629,950
Ensembl chrNW_004624778:14,570,348...14,630,325
JBrowse link
G Smad9 SMAD family member 9 ISO RGD PMID:17515860 RGD:2303144 NCBI chrNW_004624776:332,591...378,199 JBrowse link
G Socs3 suppressor of cytokine signaling 3 ISO RGD PMID:16125475 RGD:1625685 NCBI chrNW_004624801:7,841,230...7,843,912
Ensembl chrNW_004624801:7,840,889...7,843,860
JBrowse link
G Sod2 superoxide dismutase 2 ISO RGD PMID:16911942 RGD:1625690 NCBI chrNW_004624855:3,260,800...3,271,864
Ensembl chrNW_004624855:3,260,809...3,271,367
JBrowse link
G Sod3 superoxide dismutase 3 acts_upstream_of_or_within ISO (PMID:15016652) MGI PMID:15016652 NCBI chrNW_004624755:7,535,044...7,541,298
Ensembl chrNW_004624755:7,535,044...7,541,221
JBrowse link
G Sox4 SRY-box transcription factor 4 ISO RGD PMID:12011571 RGD:1581119 NCBI chrNW_004624756:5,128,848...5,156,174 JBrowse link
G Srf serum response factor involved_in ISO (PMID:19098903) BHF-UCL PMID:19098903 NCBI chrNW_004624754:16,371,995...16,381,287 JBrowse link
G Tacc3 transforming acidic coiled-coil containing protein 3 acts_upstream_of_or_within ISO (PMID:11025203) MGI PMID:11025203 NCBI chrNW_004624755:25,683,314...25,695,102
Ensembl chrNW_004624755:25,683,137...25,692,504
JBrowse link
G Tek TEK receptor tyrosine kinase ISO RGD PMID:11504684 RGD:628494 NCBI chrNW_004624736:31,345,774...31,473,727 JBrowse link
G Tfam transcription factor A, mitochondrial ISO RGD PMID:33310031 RGD:329955450 NCBI chrNW_004624791:5,183,276...5,198,986
Ensembl chrNW_004624791:5,179,195...5,198,611
JBrowse link
G Tfrc transferrin receptor ISO RGD PMID:17091493 RGD:2292034 NCBI chrNW_004624730:61,282,650...61,313,487
Ensembl chrNW_004624730:61,285,334...61,313,550
JBrowse link
G Tgfb1 transforming growth factor beta 1 ISO RGD PMID:17213961 RGD:1601553 NCBI chrNW_004624907:162,567...175,696
Ensembl chrNW_004624907:161,569...176,605
JBrowse link
G Tgfb2 transforming growth factor beta 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624835:2,363,059...2,436,536
Ensembl chrNW_004624835:2,363,139...2,437,643
JBrowse link
G Tgfb3 transforming growth factor beta 3 involved_in ISO
IEA
RGD
Ensembl
PMID:14697406 GO_REF:0000107 RGD:1625703 NCBI chrNW_004624734:25,717,011...25,739,942
Ensembl chrNW_004624734:25,716,972...25,739,199
JBrowse link
G Tgfbr1 transforming growth factor beta receptor 1 ISO RGD PMID:18760335 RGD:2302018 NCBI chrNW_004624825:1,773,158...1,899,120
Ensembl chrNW_004624825:1,839,178...1,899,156
JBrowse link
G Tgfbr2 transforming growth factor beta receptor 2 ISO RGD PMID:18760335 RGD:2302018 NCBI chrNW_004624788:8,447,679...8,535,821
Ensembl chrNW_004624788:8,447,542...8,535,959
JBrowse link
G Tgfbr3 transforming growth factor beta receptor 3 ISO RGD PMID:12183510 RGD:727411 NCBI chrNW_004624742:5,871,155...6,080,773 JBrowse link
G Th tyrosine hydroxylase involved_in ISO
IEA
RGD
TreeGrafter
PMID:12692140 PMID:21075155 GO_REF:0000118 RGD:1580029 RGD:5128812 NCBI chrNW_004624767:15,003,073...15,010,207
Ensembl chrNW_004624767:15,003,092...15,010,154
JBrowse link
G Tlr2 toll like receptor 2 ISO RGD PMID:15535030 RGD:2312731 NCBI chrNW_004624858:4,931,820...4,984,175
Ensembl chrNW_004624858:4,979,485...4,981,833
JBrowse link
G Tlr4 toll like receptor 4 ISO RGD PMID:15535030 RGD:2312731 NCBI chrNW_004624760:17,596,516...17,608,955
Ensembl chrNW_004624760:17,598,630...17,609,120
JBrowse link
G Tm9sf4 transmembrane 9 superfamily member 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624741:402,111...447,871
Ensembl chrNW_004624741:402,111...447,867
JBrowse link
G Tnf tumor necrosis factor ISO RGD PMID:15197744 RGD:4143218 NCBI chrNW_004624754:24,623,059...24,625,647
Ensembl chrNW_004624754:24,623,425...24,625,531
JBrowse link
G Tnfrsf1a TNF receptor superfamily member 1A ISO RGD PMID:21404274 RGD:5130888 NCBI chrNW_004624860:3,111,244...3,123,041
Ensembl chrNW_004624860:3,111,630...3,122,711
JBrowse link
G Trh thyrotropin releasing hormone ISO RGD PMID:15726019 RGD:1600425 NCBI chrNW_004624872:866,370...868,624
Ensembl chrNW_004624872:866,365...868,739
JBrowse link
G Trpv4 transient receptor potential cation channel subfamily V member 4 ISO RGD PMID:22962011 RGD:329813078 NCBI chrNW_004624747:10,675,625...10,685,351 JBrowse link
G Tsc2 TSC complex subunit 2 acts_upstream_of_or_within ISO (PMID:18198340) MGI PMID:18198340 NCBI chrNW_004624913:166,931...203,008
Ensembl chrNW_004624913:166,931...202,953
JBrowse link
G Txn2 thioredoxin 2 ISO RGD PMID:15468176 RGD:2306164 NCBI chrNW_004624752:11,248,640...11,260,118
Ensembl chrNW_004624752:11,249,656...11,260,118
JBrowse link
G Ube2b ubiquitin conjugating enzyme E2 B ISO RGD PMID:16483544 RGD:2308869 NCBI chrNW_004624733:37,890,350...37,907,846
Ensembl chrNW_004624733:37,891,280...37,906,066
JBrowse link
G Ucp2 uncoupling protein 2 involved_in IEA
ISO
Ensembl
RGD
PMID:17704287 GO_REF:0000107 RGD:2302404 NCBI chrNW_004624817:3,067,358...3,075,045
Ensembl chrNW_004624817:3,067,320...3,075,043
JBrowse link
G Usf1 upstream transcription factor 1 involved_in ISO (PMID:12917334) BHF-UCL PMID:12917334 NCBI chrNW_004624794:318,998...325,168
Ensembl chrNW_004624794:318,637...325,520
JBrowse link
G Vcam1 vascular cell adhesion molecule 1 ISO RGD PMID:19465514 RGD:2312873 NCBI chrNW_004624857:3,606,573...3,625,991
Ensembl chrNW_004624857:3,606,431...3,627,063
JBrowse link
G Vegfa vascular endothelial growth factor A involved_in ISO (PMID:16490744) UniProt
RGD
PMID:12881220 PMID:16490744 RGD:1580563 NCBI chrNW_004624754:15,929,414...15,943,637 JBrowse link
G Vegfb vascular endothelial growth factor B involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624767:22,068,107...22,071,731
Ensembl chrNW_004624767:22,068,107...22,071,491
JBrowse link
G Vegfc vascular endothelial growth factor C involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624769:7,689,812...7,817,366
Ensembl chrNW_004624769:7,689,407...7,817,450
JBrowse link
G Vegfd vascular endothelial growth factor D involved_in ISO
IEA
RGD
TreeGrafter
PMID:17289933 GO_REF:0000118 RGD:1642045 NCBI chrNW_004624829:148,371...181,742
Ensembl chrNW_004624829:148,317...181,098
JBrowse link
G Vhl von Hippel-Lindau tumor suppressor ISO RGD PMID:11912140 RGD:619592 NCBI chrNW_004624731:5,350,912...5,359,286 JBrowse link
G Vldlr very low density lipoprotein receptor ISO RGD PMID:15942958 RGD:1598733 NCBI chrNW_004624736:7,280,478...7,316,897
Ensembl chrNW_004624736:7,280,490...7,316,946
JBrowse link
G Wdr83 WD repeat domain 83 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:25550320) Ensembl
MGI
PMID:25550320 GO_REF:0000107 NCBI chrNW_004624901:310,709...315,302
Ensembl chrNW_004624901:310,709...315,054
JBrowse link
G Wtip WT1 interacting protein involved_in ISO (PMID:22286099) UniProt PMID:22286099 NCBI chrNW_004624794:8,721,261...8,746,923
Ensembl chrNW_004624794:8,722,110...8,745,987
JBrowse link
G Xrcc1 X-ray repair cross complementing 1 ISO RGD PMID:9763211 RGD:2302855 NCBI chrNW_004624907:1,087,611...1,113,275
Ensembl chrNW_004624907:1,087,611...1,113,266
JBrowse link
response to oxygen-glucose deprivation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bnip1 BCL2 interacting protein 1 ISO RGD PMID:22639046 RGD:14398458 NCBI chrNW_004624733:16,885,430...16,941,536
Ensembl chrNW_004624733:16,925,294...16,941,839
JBrowse link
G Bnip2 BCL2 interacting protein 2 ISO RGD PMID:22639046 RGD:14398458 NCBI chrNW_004624781:12,468,675...12,497,130
Ensembl chrNW_004624781:12,468,711...12,488,360
JBrowse link
G Bnip3 BCL2 interacting protein 3 ISO RGD PMID:22639046 RGD:14398458 NCBI chrNW_004624737:14,848,355...14,863,731
Ensembl chrNW_004624737:14,848,350...14,862,965
JBrowse link
G Nos2 nitric oxide synthase 2 ISO RGD PMID:10997722 RGD:152176656 NCBI chrNW_004624786:491,944...530,427
Ensembl chrNW_004624786:489,311...528,271
JBrowse link
G Nppc natriuretic peptide C involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624843:4,869,278...4,873,444
Ensembl chrNW_004624843:4,869,614...4,873,448
JBrowse link
G Parp2 poly(ADP-ribose) polymerase 2 ISO RGD PMID:19422384 RGD:13514045 NCBI chrNW_004624825:4,312,243...4,326,058
Ensembl chrNW_004624825:4,313,217...4,325,968
JBrowse link
G Sox2 SRY-box transcription factor 2 ISO RGD PMID:34321385 RGD:155882552 NCBI chrNW_004624730:59,570,879...59,573,001
Ensembl chrNW_004624730:59,570,915...59,571,871
JBrowse link
G Zeb2 zinc finger E-box binding homeobox 2 ISO RGD PMID:34321385 RGD:155882552 NCBI chrNW_004624732:44,097,348...44,226,701
Ensembl chrNW_004624732:44,101,613...44,139,997
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 15028
    response to stimulus 8118
      response to abiotic stimulus 1415
        response to oxygen levels 506
          response to decreased oxygen levels 463
            cellular response to decreased oxygen levels + 220
            response to anoxia + 6
            response to hypoxia + 443
            response to oxygen-glucose deprivation + 14
paths to the root